View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16632_low_93 (Length: 225)
Name: NF16632_low_93
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16632_low_93 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 10233322 - 10233507
Alignment:
| Q |
21 |
ggaaaaagcatcgcaaactacgcagagaggatcgacaccataaatttcctaataatataaaacaccaataatctagtaatcatcaatttgcaatattgca |
120 |
Q |
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| T |
10233322 |
ggaaaaagcctcgcaaattatgctgagaggatcgacaccataagtttcctaataatataaaacaccaataatctagtaatcatcaatttgcaatattgca |
10233421 |
T |
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| Q |
121 |
aatgcgaagtccattgttatttggatttagttcattgttaggggacaaaccctaaaagaatcaagaggaggtatccaatgttctaca |
207 |
Q |
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| T |
10233422 |
aatgcgaagtccattgttatttgga-ttagtttattgttaggggacaaaccctaaaagaatcaaaaggaggtatccaatgttctaca |
10233507 |
T |
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