View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16632_low_98 (Length: 215)

Name: NF16632_low_98
Description: NF16632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16632_low_98
NF16632_low_98
[»] chr6 (24 HSPs)
chr6 (17-69)||(3276367-3276419)
chr6 (29-69)||(17517328-17517368)
chr6 (29-69)||(21165246-21165286)
chr6 (17-69)||(21953206-21953258)
chr6 (18-69)||(1972400-1972451)
chr6 (33-67)||(20895960-20895994)
chr6 (29-66)||(3279518-3279555)
chr6 (37-69)||(16995451-16995483)
chr6 (29-69)||(18810532-18810572)
chr6 (31-67)||(30253560-30253596)
chr6 (29-69)||(34998160-34998200)
chr6 (19-69)||(15442937-15442987)
chr6 (29-67)||(17516164-17516202)
chr6 (29-66)||(1171670-1171707)
chr6 (36-69)||(20897523-20897556)
chr6 (33-69)||(1974175-1974211)
chr6 (17-69)||(6412527-6412579)
chr6 (17-69)||(13268109-13268161)
chr6 (33-69)||(20393291-20393327)
chr6 (33-69)||(26421866-26421902)
chr6 (29-69)||(29291359-29291399)
chr6 (17-69)||(31167148-31167200)
chr6 (17-69)||(31198615-31198667)
chr6 (33-69)||(34995114-34995150)
[»] chr4 (30 HSPs)
chr4 (17-69)||(22204055-22204107)
chr4 (17-69)||(42359353-42359405)
chr4 (17-69)||(33137235-33137287)
chr4 (22-69)||(45619743-45619790)
chr4 (17-69)||(3879086-3879138)
chr4 (29-69)||(3880515-3880555)
chr4 (17-69)||(19675627-19675679)
chr4 (29-69)||(32699333-32699373)
chr4 (30-69)||(5259171-5259210)
chr4 (22-69)||(38166495-38166542)
chr4 (19-69)||(32697999-32698049)
chr4 (29-66)||(41935089-41935126)
chr4 (36-69)||(42358032-42358065)
chr4 (29-69)||(19674414-19674454)
chr4 (29-69)||(29060901-29060941)
chr4 (17-69)||(34659706-34659758)
chr4 (29-69)||(41933818-41933858)
chr4 (29-69)||(45618285-45618325)
chr4 (17-68)||(37557143-37557194)
chr4 (28-66)||(16574386-16574424)
chr4 (36-69)||(44705299-44705332)
chr4 (17-69)||(11693069-11693121)
chr4 (37-69)||(13074093-13074125)
chr4 (17-69)||(17281571-17281623)
chr4 (17-69)||(17370073-17370125)
chr4 (17-69)||(26412532-26412584)
chr4 (37-69)||(29059713-29059745)
chr4 (29-69)||(33134891-33134931)
chr4 (17-69)||(42824039-42824091)
chr4 (17-69)||(53915683-53915735)
[»] chr3 (44 HSPs)
chr3 (81-125)||(8651020-8651064)
chr3 (17-69)||(46026076-46026128)
chr3 (17-69)||(53121302-53121354)
chr3 (22-68)||(40476222-40476268)
chr3 (17-69)||(20585651-20585703)
chr3 (156-199)||(8650946-8650989)
chr3 (29-69)||(39820623-39820663)
chr3 (29-69)||(44507818-44507858)
chr3 (29-69)||(46104343-46104383)
chr3 (29-69)||(52401017-52401057)
chr3 (29-69)||(52708636-52708676)
chr3 (33-69)||(54437490-54437526)
chr3 (29-68)||(15782216-15782255)
chr3 (29-68)||(45267306-45267345)
chr3 (29-66)||(22508738-22508775)
chr3 (24-69)||(43641143-43641188)
chr3 (17-69)||(976780-976832)
chr3 (17-69)||(4705681-4705733)
chr3 (17-69)||(9855178-9855230)
chr3 (29-69)||(40477393-40477433)
chr3 (29-69)||(42446526-42446566)
chr3 (29-69)||(46027436-46027476)
chr3 (33-69)||(47433832-47433868)
chr3 (17-69)||(48033058-48033110)
chr3 (29-69)||(52403143-52403183)
chr3 (22-69)||(3417804-3417851)
chr3 (29-68)||(20489377-20489416)
chr3 (17-68)||(48035739-48035790)
chr3 (38-68)||(14788441-14788471)
chr3 (29-67)||(39819314-39819352)
chr3 (33-66)||(15782732-15782765)
chr3 (38-67)||(20488368-20488397)
chr3 (29-66)||(37845408-37845445)
chr3 (29-66)||(42444040-42444077)
chr3 (33-66)||(52707539-52707572)
chr3 (37-69)||(20405191-20405223)
chr3 (17-69)||(20644824-20644876)
chr3 (29-69)||(20802848-20802888)
chr3 (37-69)||(30106188-30106220)
chr3 (17-69)||(38232241-38232293)
chr3 (29-69)||(38505598-38505638)
chr3 (29-69)||(44506582-44506622)
chr3 (29-69)||(45268589-45268629)
chr3 (22-66)||(50562924-50562968)
[»] chr2 (25 HSPs)
chr2 (17-69)||(2412435-2412487)
chr2 (29-69)||(1777469-1777509)
chr2 (17-69)||(23861752-23861804)
chr2 (29-69)||(25977870-25977910)
chr2 (33-69)||(25979274-25979310)
chr2 (22-69)||(1590911-1590958)
chr2 (21-67)||(8810714-8810760)
chr2 (33-69)||(25283295-25283331)
chr2 (17-69)||(30215819-30215871)
chr2 (30-69)||(30844568-30844607)
chr2 (39-69)||(15531029-15531059)
chr2 (29-67)||(23863069-23863107)
chr2 (28-69)||(12068363-12068404)
chr2 (33-66)||(24754181-24754214)
chr2 (29-66)||(36837797-36837834)
chr2 (29-65)||(588557-588593)
chr2 (33-69)||(1778813-1778849)
chr2 (22-66)||(4040228-4040272)
chr2 (37-69)||(10671630-10671662)
chr2 (29-69)||(11087049-11087089)
chr2 (33-69)||(11088703-11088739)
chr2 (17-69)||(18113089-18113141)
chr2 (37-69)||(19603738-19603770)
chr2 (33-69)||(29794340-29794375)
chr2 (17-69)||(38231431-38231483)
[»] chr8 (24 HSPs)
chr8 (29-69)||(1420461-1420501)
chr8 (17-69)||(14197825-14197877)
chr8 (29-69)||(28998012-28998052)
chr8 (29-67)||(3483635-3483673)
chr8 (29-69)||(10717121-10717161)
chr8 (29-69)||(10718467-10718507)
chr8 (17-69)||(22270943-22270995)
chr8 (29-69)||(36588222-36588262)
chr8 (29-69)||(22534741-22534781)
chr8 (17-69)||(36589394-36589446)
chr8 (17-69)||(38456737-38456789)
chr8 (29-69)||(45517979-45518019)
chr8 (29-68)||(28996835-28996874)
chr8 (29-66)||(3484806-3484843)
chr8 (17-69)||(1376935-1376987)
chr8 (17-69)||(1385562-1385614)
chr8 (33-69)||(10292816-10292852)
chr8 (18-66)||(17574105-17574153)
chr8 (17-69)||(20984146-20984198)
chr8 (33-69)||(22272293-22272329)
chr8 (29-69)||(22533317-22533357)
chr8 (33-69)||(30123152-30123188)
chr8 (29-69)||(30124242-30124282)
chr8 (29-69)||(39439924-39439964)
[»] chr7 (27 HSPs)
chr7 (29-69)||(24195607-24195647)
chr7 (14-69)||(25046244-25046299)
chr7 (17-66)||(12385714-12385763)
chr7 (29-69)||(5611526-5611566)
chr7 (29-68)||(31489954-31489993)
chr7 (17-68)||(31853549-31853600)
chr7 (17-68)||(32196685-32196736)
chr7 (29-66)||(11217090-11217127)
chr7 (29-66)||(38742184-38742221)
chr7 (17-69)||(12932731-12932783)
chr7 (29-69)||(12933419-12933459)
chr7 (33-69)||(13418950-13418986)
chr7 (33-69)||(24197126-24197162)
chr7 (33-69)||(31848167-31848203)
chr7 (33-69)||(32197932-32197968)
chr7 (29-69)||(35212068-35212108)
chr7 (29-69)||(41694974-41695014)
chr7 (38-69)||(36748198-36748229)
chr7 (33-66)||(32544797-32544830)
chr7 (29-66)||(43066004-43066041)
chr7 (29-69)||(554245-554285)
chr7 (29-69)||(17066425-17066465)
chr7 (37-69)||(29198303-29198335)
chr7 (29-69)||(39619810-39619850)
chr7 (33-69)||(41693645-41693681)
chr7 (29-69)||(42254958-42254998)
chr7 (37-69)||(44568326-44568358)
[»] chr5 (18 HSPs)
chr5 (29-69)||(3936578-3936618)
chr5 (22-69)||(34911840-34911887)
chr5 (29-69)||(27571148-27571188)
chr5 (28-69)||(25252641-25252682)
chr5 (28-69)||(25316426-25316467)
chr5 (17-69)||(3938067-3938119)
chr5 (29-69)||(4565393-4565433)
chr5 (17-69)||(6894017-6894069)
chr5 (37-69)||(31540496-31540528)
chr5 (17-67)||(14809165-14809215)
chr5 (29-67)||(27570058-27570096)
chr5 (13-69)||(293828-293884)
chr5 (17-69)||(1104858-1104910)
chr5 (37-69)||(3954052-3954084)
chr5 (17-69)||(20986037-20986089)
chr5 (37-69)||(31541649-31541681)
chr5 (29-69)||(35604419-35604459)
chr5 (17-69)||(37271654-37271706)
[»] chr1 (37 HSPs)
chr1 (29-69)||(23469988-23470028)
chr1 (29-69)||(27262908-27262948)
chr1 (29-69)||(9774907-9774947)
chr1 (33-69)||(11711276-11711312)
chr1 (33-69)||(20723711-20723747)
chr1 (29-69)||(24427388-24427428)
chr1 (29-69)||(24609919-24609959)
chr1 (17-69)||(26865191-26865243)
chr1 (29-69)||(27264235-27264275)
chr1 (17-69)||(35911895-35911947)
chr1 (33-69)||(45979519-45979555)
chr1 (29-69)||(46075069-46075109)
chr1 (22-69)||(35722297-35722344)
chr1 (34-69)||(37395633-37395668)
chr1 (19-66)||(48857194-48857241)
chr1 (29-66)||(9774040-9774077)
chr1 (22-67)||(51240121-51240166)
chr1 (33-69)||(26863860-26863896)
chr1 (37-69)||(35721101-35721133)
chr1 (33-69)||(37396863-37396899)
chr1 (29-69)||(47038866-47038906)
chr1 (29-69)||(48594067-48594107)
chr1 (29-69)||(48598678-48598718)
chr1 (29-69)||(50164403-50164443)
chr1 (32-69)||(39163046-39163083)
chr1 (29-69)||(2604146-2604186)
chr1 (17-69)||(10631476-10631528)
chr1 (33-69)||(17977582-17977618)
chr1 (33-69)||(20722472-20722508)
chr1 (29-69)||(24611136-24611176)
chr1 (17-69)||(33000305-33000357)
chr1 (17-69)||(33234860-33234912)
chr1 (33-69)||(34934770-34934806)
chr1 (17-69)||(40718422-40718474)
chr1 (17-69)||(46073885-46073937)
chr1 (33-69)||(48334155-48334191)
chr1 (29-69)||(48588980-48589020)
[»] scaffold0562 (1 HSPs)
scaffold0562 (17-69)||(9922-9974)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-69)||(202579-202631)
[»] scaffold0002 (4 HSPs)
scaffold0002 (33-69)||(345920-345956)
scaffold0002 (29-69)||(376388-376428)
scaffold0002 (29-69)||(374335-374375)
scaffold0002 (29-69)||(344937-344977)
[»] scaffold0517 (2 HSPs)
scaffold0517 (34-69)||(11546-11581)
scaffold0517 (33-69)||(10315-10351)
[»] scaffold0765 (1 HSPs)
scaffold0765 (29-66)||(1863-1900)
[»] scaffold0230 (1 HSPs)
scaffold0230 (29-69)||(450-490)
[»] scaffold0106 (2 HSPs)
scaffold0106 (17-69)||(29729-29781)
scaffold0106 (29-69)||(30926-30966)
[»] scaffold0001 (2 HSPs)
scaffold0001 (33-69)||(119593-119629)
scaffold0001 (29-69)||(121004-121044)
[»] scaffold0516 (1 HSPs)
scaffold0516 (29-69)||(1154-1194)
[»] scaffold0119 (1 HSPs)
scaffold0119 (37-69)||(16724-16756)


Alignment Details
Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3276419 - 3276367
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  3276419 ggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttagcc 3276367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 17517328 - 17517368
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  17517328 aaactcgccatatttgcagggaccaaaaacatattttagcc 17517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 21165286 - 21165246
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  21165286 aaactcgctatatttgcagggaccaaaagcatattttagcc 21165246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 21953258 - 21953206
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  21953258 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 21953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 1972451 - 1972400
Alignment:
Q  18 gactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| | ||| ||||| |||||||||||||||||||||||||||||||    
T  1972451 gactaaaacccaaattcgctttatttgcagggaccaaaaacatattttagcc 1972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 20895994 - 20895960
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||||||||||||||||||||||||||||||||    
T  20895994 tcgctatatttgcagggaccaaaaacatattttag 20895960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 3279518 - 3279555
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||||| |||||||||||||||    
T  3279518 aaactcgctatatttgcagggatcaaaaacatatttta 3279555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 16995483 - 16995451
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||    
T  16995483 tatatttgcagggaccaaaaacatattttagcc 16995451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 18810572 - 18810532
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  18810572 aaactcactatatttgcagggaccaaaatcatattttagcc 18810532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 30253560 - 30253596
Alignment:
Q  31 actcgctatatttgcagggaccaaaaacatattttag 67  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30253560 actcgctgtatttgcagggaccaaaaacatattttag 30253596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 34998160 - 34998200
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  34998160 aaactcgctatatttgcagggatcaaaagcatattttagcc 34998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15442987 - 15442937
Alignment:
Q  19 actaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| ||||  | |||||||||||||||||||| ||||||||||||    
T  15442987 actaaaatcaaaacgaggtatatttgcagggaccaaaaccatattttagcc 15442937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 17516202 - 17516164
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  17516202 aaactcaccatatttgcagggaccaaaaacatattttag 17516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 1171670 - 1171707
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  1171670 aaactcgttatatttgcagggatcaaaaacatatttta 1171707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 20897523 - 20897556
Alignment:
Q  36 ctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||| ||||||||||||    
T  20897523 ctatatttgcagggaccaaaaccatattttagcc 20897556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1974175 - 1974211
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  1974175 tcgctatatttgcaaggatcaaaaacatattttagcc 1974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 6412527 - 6412579
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  6412527 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaccatattttagcc 6412579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 13268161 - 13268109
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| ||||||  |  ||||||||||||||||||| ||||||||||||    
T  13268161 ggactaaaacctaaacgaggcatatttgcagggaccaaaaccatattttagcc 13268109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 20393291 - 20393327
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  20393291 tcgctatatttgcagggatcaaaagcatattttagcc 20393327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 26421866 - 26421902
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  26421866 tcgctatatttgcagagaccaaaaacatgttttagcc 26421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 29291399 - 29291359
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||| ||||||||| ||||||||||||    
T  29291399 aaactcgccatatttgcaaggaccaaaagcatattttagcc 29291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 31167148 - 31167200
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  || |||||||||||||| |||| ||||||||||||    
T  31167148 ggactaaaatcaaaacgagccatatttgcagggactaaaaccatattttagcc 31167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 31198667 - 31198615
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||||  || ||||||||||||||||||| ||||||||||||    
T  31198667 ggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 31198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 34995150 - 34995114
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34995150 tcgctatatttgcagggatcaaaagcatattttagcc 34995114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 8e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22204107 - 22204055
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  22204107 ggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 22204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 42359353 - 42359405
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42359353 ggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 42359405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 33137235 - 33137287
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  33137235 ggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttagcc 33137287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 45619743 - 45619790
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  45619743 aaaacctaaactcgctatatttgcagggactaaaaacatattttagcc 45619790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3879138 - 3879086
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  3879138 ggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcc 3879086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 3880515 - 3880555
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  3880515 aaactcgctatatttgcaggaaccaaaaacatattttagcc 3880555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 19675627 - 19675679
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  19675627 ggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 19675679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 32699333 - 32699373
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  32699333 aaactcgctatatttacagggaccaaaaacatattttagcc 32699373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 5259171 - 5259210
Alignment:
Q  30 aactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  5259171 aactcgccatatttgcagggaccaaaaacatattttagcc 5259210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 38166542 - 38166495
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||    
T  38166542 aaaatccaaactcgctatatttgcagggattaaaaacatattttagcc 38166495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 32698049 - 32697999
Alignment:
Q  19 actaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||||    
T  32698049 actaaaacctaaattcgctatatttgcagggatcaaaatcatattttagcc 32697999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 41935089 - 41935126
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  41935089 aaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 42358065 - 42358032
Alignment:
Q  36 ctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||||||||||    
T  42358065 ctatatttgcagggaccaaaaacatattttagcc 42358032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 19674454 - 19674414
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  19674454 aaactcgctatatttgcaaggaccaaaagcatattttagcc 19674414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 29060901 - 29060941
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  29060901 aaactcgctatatttgcagggattaaaaacatattttagcc 29060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 34659758 - 34659706
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| || ||||||| ||||||||||||||||||| ||||||||||||    
T  34659758 ggaccaaaaccttaactcgccatatttgcagggaccaaaagcatattttagcc 34659706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 41933858 - 41933818
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  41933858 aaactcgctatatttgcagagaccaaaatcatattttagcc 41933818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 45618325 - 45618285
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  45618325 aaactcgctatatttgcagggaccaaaagcatatattagcc 45618285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 37557143 - 37557194
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    ||||||||||| ||||  | |||||||||||||||||||| |||||||||||    
T  37557143 ggactaaaatcaaaacgaggtatatttgcagggaccaaaaccatattttagc 37557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 16574386 - 16574424
Alignment:
Q  28 taaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  16574386 taaattcgctatatttgcagggactaaaaacatatttta 16574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 44705332 - 44705299
Alignment:
Q  36 ctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||| |||||||||||||||||||||    
T  44705332 ctatatttgcagagaccaaaaacatattttagcc 44705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 11693069 - 11693121
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  11693069 ggactaaaatcaaaacgagacatatttgcagggaccaaaaccatattttagcc 11693121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 13074093 - 13074125
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  13074093 tatatttgcagggaccaaaaccatattttagcc 13074125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 17281623 - 17281571
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| ||||||||||||||||||| |||| || |||||||||    
T  17281623 ggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcc 17281571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 17370125 - 17370073
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| ||||||||||||||||||| |||| || |||||||||    
T  17370125 ggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttagcc 17370073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 26412532 - 26412584
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||||  || ||||||||||||||||||| ||||||||||||    
T  26412532 ggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 26412584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 29059745 - 29059713
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||| |||||||||||||||||    
T  29059745 tatatttgcagggacgaaaaacatattttagcc 29059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 33134931 - 33134891
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  33134931 aaactcgtcatatttgcagggatcaaaaacatattttagcc 33134891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 42824039 - 42824091
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  42824039 ggactaaaatcaaaacaagacatatttgcagggaccaaaaccatattttagcc 42824091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 53915735 - 53915683
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  53915735 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaccatattttagcc 53915683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 8651064 - 8651020
Alignment:
Q  81 atgcaaacatggttgtgttgagtctgaaaacactttcgtaacatc 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8651064 atgcaaacatggttgtgttgagtctgaaaacactttcgtaacatc 8651020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 46026128 - 46026076
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  46026128 ggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttagcc 46026076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 53121354 - 53121302
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  53121354 ggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 53121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 40476268 - 40476222
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  40476268 aaaatccaaactcgctatatttgcagggaccaaaaacatattttagc 40476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 20585651 - 20585703
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  20585651 ggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttagcc 20585703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 8650989 - 8650946
Alignment:
Q  156 cctaatattttctcaatcaagtctagtgcgaggggaatcaattt 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  8650989 cctaatattttctcaatcaagtctagtgcaaggggaatcaattt 8650946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 39820623 - 39820663
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  39820623 aaactcgctatatttgcagggaccaaaaccatattttagcc 39820663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 44507818 - 44507858
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44507818 aaactcgctatatttgcagggaccaaaatcatattttagcc 44507858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 46104383 - 46104343
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  46104383 aaactcgctatatttgcagggaccaaaatcatattttagcc 46104343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 52401057 - 52401017
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  52401057 aaactcgccatatttgcagggaccaaaaacatattttagcc 52401017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 52708636 - 52708676
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  52708636 aaactcgctatatttgcagggaccaaaagcatattttagcc 52708676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 54437490 - 54437526
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  54437490 tcgctatatttgcagggaccaaaaacatattttagcc 54437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 15782255 - 15782216
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  15782255 aaactcgctatatttgcagggaccaaaaatatattttagc 15782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 45267345 - 45267306
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  45267345 aaactcgctatatttgcagggatcaaaaacatattttagc 45267306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 22508775 - 22508738
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||||||||||| |||||||||    
T  22508775 aaactcgctatatttgcagggaccaaaatcatatttta 22508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 43641188 - 43641143
Alignment:
Q  24 aatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||    
T  43641188 aatccaaactcgctatatttgcagggactaaaagcatattttagcc 43641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 976832 - 976780
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||  |||| |||||||||||||||||| ||||| ||||||||||||    
T  976832 ggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttagcc 976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 4705733 - 4705681
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| |||||||||| ||||||||||||| ||||| ||||||||||||    
T  4705733 ggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttagcc 4705681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 9855230 - 9855178
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||||||||||||||| |||||| ||||| ||||||||||||    
T  9855230 ggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttagcc 9855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 40477393 - 40477433
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  40477393 aaactcgttatatttgcagggaccaaaatcatattttagcc 40477433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 42446566 - 42446526
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  42446566 aaactcgccatatttgcagggaccaaaagcatattttagcc 42446526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 46027436 - 46027476
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  46027436 aaactcgctatatttgcagggaccaaaagtatattttagcc 46027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 47433832 - 47433868
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47433832 tcgctatatttgcagggaccaaaaccatattttagcc 47433868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 48033110 - 48033058
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||| | ||||||||| ||||||||||||||||||||||    
T  48033110 ggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttagcc 48033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 52403143 - 52403183
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  52403143 aaactcgccatatttgcagggaccaaaagcatattttagcc 52403183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 3417804 - 3417851
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| || |||||| |||||| |||||||||||||||||||||||||    
T  3417804 aaaatttatactcgccatatttacagggaccaaaaacatattttagcc 3417851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 20489377 - 20489416
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  20489377 aaactcgtcatatttgcagggaccaaaaacatattttagc 20489416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 48035739 - 48035790
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||| |||||| |||||||  ||||||||||||| |||||||||||||||||    
T  48035739 ggaccaaaatccaaactcgtcatatttgcagggatcaaaaacatattttagc 48035790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 14788471 - 14788441
Alignment:
Q  38 atatttgcagggaccaaaaacatattttagc 68  Q
    |||||||||||||||||||||||||||||||    
T  14788471 atatttgcagggaccaaaaacatattttagc 14788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 39819352 - 39819314
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  39819352 aaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 15782732 - 15782765
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||| |||||||||||||||||||||    
T  15782732 tcgctatatttgtagggaccaaaaacatatttta 15782765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 20488397 - 20488368
Alignment:
Q  38 atatttgcagggaccaaaaacatattttag 67  Q
    ||||||||||||||||||||||||||||||    
T  20488397 atatttgcagggaccaaaaacatattttag 20488368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 37845445 - 37845408
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  37845445 aaactcactatatttgcagagaccaaaaacatatttta 37845408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 42444077 - 42444040
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||| || |||||||||||||||||||||||||||||    
T  42444077 aaacttgccatatttgcagggaccaaaaacatatttta 42444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 52707572 - 52707539
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||| |||||||||||||||||||    
T  52707572 tcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 20405191 - 20405223
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  20405191 tatatttgcagggaccaaaaccatattttagcc 20405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 20644824 - 20644876
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  | ||||||| |||||||||||| ||||||||||||    
T  20644824 ggactaaaatcaaaacggggtatatttacagggaccaaaaccatattttagcc 20644876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 20802888 - 20802848
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||| |||||| | |||||||||||||||    
T  20802888 aaactcgctatatttgtagggactagaaacatattttagcc 20802848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 30106188 - 30106220
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  30106188 tatatttgcagggaccaaaaccatattttagcc 30106220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 38232293 - 38232241
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  38232293 ggactaaaatcaaaacgagacatatttgcagggaccaaaatcatattttagcc 38232241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 38505598 - 38505638
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||| ||||| ||||||||||||    
T  38505598 aaactcgccatatttgcagggagcaaaagcatattttagcc 38505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 44506622 - 44506582
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| ||||||||||||||| |||| ||||||||||||    
T  44506622 aaactcgttatatttgcagggactaaaaccatattttagcc 44506582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 45268589 - 45268629
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  45268589 aaacttgctatatttgcagggattaaaaacatattttagcc 45268629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 50562968 - 50562924
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||| |||||||  ||||||||| |||||||||||||||||||||    
T  50562968 aaaacctaaacttactatatttgtagggaccaaaaacatatttta 50562924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 2412435 - 2412487
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  2412435 ggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttagcc 2412487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 1777509 - 1777469
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1777509 aaactcgctatatttgcagggaccaaaaacatattttagcc 1777469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 23861804 - 23861752
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||| | ||||||||||||||||||||||||||||||||    
T  23861804 ggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcc 23861752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 25977910 - 25977870
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  25977910 aaactcactatatttgcagggaccaaaaacatattttagcc 25977870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 25979274 - 25979310
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  25979274 tcgctatatttgcagggaccaaaaacatattttagcc 25979310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 1590911 - 1590958
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  1590911 aaaatctaaactcgttatattttcaaggaccaaaaacatattttagcc 1590958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 8810714 - 8810760
Alignment:
Q  21 taaaatctaaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  8810714 taaaatccaaattcgctatatttgcagagaccaaaaacatattttag 8810760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 25283295 - 25283331
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25283295 tcgctatatttgcagtgaccaaaaacatattttagcc 25283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 30215819 - 30215871
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | |||| || |||||||||||||||||||| ||||||||||||    
T  30215819 ggactaaaaccaaaacgcgatatatttgcagggaccaaaaccatattttagcc 30215871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 30844568 - 30844607
Alignment:
Q  30 aactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  30844568 aactcgttatatttgcaaggaccaaaaacatattttagcc 30844607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 69
Target Start/End: Complemental strand, 15531059 - 15531029
Alignment:
Q  39 tatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||    
T  15531059 tatttgcagggaccaaaaacatattttagcc 15531029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 23863069 - 23863107
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  23863069 aaactcgccatatttgcagagaccaaaaacatattttag 23863107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 12068363 - 12068404
Alignment:
Q  28 taaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||||||||||||||| ||||| ||||||||||||    
T  12068363 taaattcgctatatttgcagggatcaaaagcatattttagcc 12068404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 24754181 - 24754214
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||| |||||||||||||||||||||||||||||    
T  24754181 tcgccatatttgcagggaccaaaaacatatttta 24754214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 36837797 - 36837834
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  36837797 aaactcgctatatttgcagagaccaaaaatatatttta 36837834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 588557 - 588593
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttt 65  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  588557 aaactcgttatatttgcagggacaaaaaacatatttt 588593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1778813 - 1778849
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  1778813 tcgctatatttgcaggaaccaaaagcatattttagcc 1778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 4040228 - 4040272
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||| ||||| || ||||||||||||||||||||| |||||||||    
T  4040228 aaaacctaaattctctatatttgcagggaccaaaatcatatttta 4040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 10671662 - 10671630
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  10671662 tatatttgcagggaccaaaaccatattttagcc 10671630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 11087089 - 11087049
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  11087089 aaactcgctatatttgcagggattaaaatcatattttagcc 11087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 11088703 - 11088739
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||| |||| |||||||||||||||||    
T  11088703 tcgctatatttgcatggacgaaaaacatattttagcc 11088739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 18113141 - 18113089
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||||| |  ||||||||||||||||||| ||||||||||||    
T  18113141 ggactaaaaccaaaactaggcatatttgcagggaccaaaaccatattttagcc 18113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 19603770 - 19603738
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||    
T  19603770 tatatttgcagggaccaaaaacatatttaagcc 19603738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 29794340 - 29794375
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29794340 tcgctatatttgcagggacc-aaaacatattttagcc 29794375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 38231483 - 38231431
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  | |||||||||||||| ||||| ||||||||||||    
T  38231483 ggactaaaatcaaaacaaggtatatttgcagggatcaaaatcatattttagcc 38231431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 1420461 - 1420501
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1420461 aaactcgctatatttgcagggaccaaaaacatattttagcc 1420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 14197877 - 14197825
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  14197877 ggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttagcc 14197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 28998012 - 28998052
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28998012 aaactcgctatatttgcagggaccaaaaacatattttagcc 28998052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 3483673 - 3483635
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3483673 aaactcgctatatttgcagggaccaaaaacatattttag 3483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 10717161 - 10717121
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  10717161 aaactcgctatatttgcagggaccaaaagcatattttagcc 10717121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 10718467 - 10718507
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  10718467 aaactcgctatatttgcagggaccaaaagcatattttagcc 10718507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22270995 - 22270943
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  22270995 ggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttagcc 22270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 36588262 - 36588222
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  36588262 aaactcgctatatttgcagggaccaaaagcatattttagcc 36588222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22534741 - 22534781
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  22534741 aaactcgctatatttgcagggatcaaaagcatattttagcc 22534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 36589394 - 36589446
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| |||||||||||||||||||||| || |||| ||||||||||||    
T  36589394 ggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttagcc 36589446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 38456737 - 38456789
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| ||||| | |||||||||||||||||||||| ||||||||||||    
T  38456737 ggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagcc 38456789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 45517979 - 45518019
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  45517979 aaactcgctatacttgcagggaccaaaagcatattttagcc 45518019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 28996874 - 28996835
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  28996874 aaactcactatatttgcagggaccaaaatcatattttagc 28996835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 3484806 - 3484843
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  3484806 aaactcgctatatttgcaggaaccaaaagcatatttta 3484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 1376987 - 1376935
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| | |||||||||||||||||||||| ||||||| ||||    
T  1376987 ggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagcc 1376935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 1385562 - 1385614
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| | |||||||||||||||||||||| ||||||| ||||    
T  1385562 ggaccaaaatccaaattggctatatttgcagggaccaaaaccatatttaagcc 1385614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 10292852 - 10292816
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  10292852 tcgctatatttgaagggaccaaaatcatattttagcc 10292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 17574153 - 17574105
Alignment:
Q  18 gactaaaatctaaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||| |||| ||  ||||||||||||||||||| |||||||||    
T  17574153 gactaaaatcaaaacccgacatatttgcagggaccaaaaccatatttta 17574105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 20984198 - 20984146
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||||  || ||||||||||||||||||| ||||||||||||    
T  20984198 ggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 20984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 22272293 - 22272329
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  22272293 tcgctatatttgcggggaccaaaagcatattttagcc 22272329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 22533357 - 22533317
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||| | |||||||||||| ||||||||||||    
T  22533357 aaactcgctatatatacagggaccaaaagcatattttagcc 22533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 30123188 - 30123152
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||| | ||||||||||||||||||||||    
T  30123188 tcgctatatttgtatggaccaaaaacatattttagcc 30123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 30124242 - 30124282
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| ||| |||||||||||||||||| ||||||||||||    
T  30124242 aaacttgctttatttgcagggaccaaaagcatattttagcc 30124282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 39439964 - 39439924
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| || ||||||||||||||||||| ||||||||||||    
T  39439964 aaactagccatatttgcagggaccaaaatcatattttagcc 39439924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 24195647 - 24195607
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24195647 aaactcgctatatttgcagggaccaaaaacatattttagcc 24195607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 25046244 - 25046299
Alignment:
Q  14 catggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  25046244 catggaccaaaatctaaactcgccatatttgcaaggaccaaaatcatattttagcc 25046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 12385714 - 12385763
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  12385714 ggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 5611526 - 5611566
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5611526 aaactcgctatatttgcagggaccaaaatcatattttagcc 5611566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 31489954 - 31489993
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  31489954 aaactcgttatatttgcagggaccaaaaacatattttagc 31489993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 31853600 - 31853549
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||| |||||| |||||| | |||||||||||||||||||||||||||||||    
T  31853600 ggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttagc 31853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 32196736 - 32196685
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagc 68  Q
    |||| |||||| |||  |||||||||||||||||||||||||||||||||||    
T  32196736 ggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttagc 32196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 11217090 - 11217127
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11217090 aaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 38742221 - 38742184
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38742221 aaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 12932731 - 12932783
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||||||||||||||||    
T  12932731 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaacatattttagcc 12932783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 12933459 - 12933419
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  12933459 aaactcactatatttgcagggaccaaaagcatattttagcc 12933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 13418986 - 13418950
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| ||||||||||||||||||||||||||||||||    
T  13418986 tcgcaatatttgcagggaccaaaaacatattttagcc 13418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 24197126 - 24197162
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  24197126 tcgctatatttgcagggaccaaaagcatattttagcc 24197162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 31848167 - 31848203
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31848167 tcgctatatttgcagggactaaaaacatattttagcc 31848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 32197932 - 32197968
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32197932 tcgctatatttgcagggaccaaaagcatattttagcc 32197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 35212108 - 35212068
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  35212108 aaactcgtcatatttgcagggaccaaaaacatattttagcc 35212068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 41694974 - 41695014
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  41694974 aaactcgctatatttgcagggatgaaaaacatattttagcc 41695014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 36748229 - 36748198
Alignment:
Q  38 atatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||||||||    
T  36748229 atatttgcagggaccaaaaacatattttagcc 36748198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 32544797 - 32544830
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||||||| |||||||||    
T  32544797 tcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 43066041 - 43066004
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  43066041 aaactcgctatatttgcagggataaaaaacatatttta 43066004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 554285 - 554245
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||| |  |||||||||||    
T  554285 aaactcgctatatttgcagggaccaatattatattttagcc 554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 17066465 - 17066425
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  17066465 aaactcgctatatttgcagggattaaaagcatattttagcc 17066425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 29198335 - 29198303
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  29198335 tatatttgcagggaccaaaaccatattttagcc 29198303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 39619810 - 39619850
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||| ||||||||| ||||||||||||    
T  39619810 aaactcgccatatttgcatggaccaaaagcatattttagcc 39619850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 41693681 - 41693645
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  41693681 tcgccatatttgcagggatcaaaaacatattttagcc 41693645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 42254998 - 42254958
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| |||||| |||||||||||| ||||||||||||    
T  42254998 aaactcgccatatttacagggaccaaaagcatattttagcc 42254958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 44568358 - 44568326
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  44568358 tatatttgcagggaccaaaaccatattttagcc 44568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3936618 - 3936578
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3936618 aaactcgctatatttgcagggaccaaaaacatattttagcc 3936578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 34911840 - 34911887
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  34911840 aaaatccaaactcgctatatttgcagggaccaaaatcatattttagcc 34911887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 27571148 - 27571188
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  27571148 aaactcgctatatttgcagggaccaaaatcatattttagcc 27571188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 25252682 - 25252641
Alignment:
Q  28 taaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  25252682 taaactcgctatatttgcagagatcaaaaacatattttagcc 25252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 25316467 - 25316426
Alignment:
Q  28 taaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  25316467 taaactcgctatatttgcagagatcaaaaacatattttagcc 25316426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 3938067 - 3938119
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| ||||||| ||||||||||||||||| |||| ||||||||||||    
T  3938067 ggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagcc 3938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 4565433 - 4565393
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  4565433 aaactcgctatatttgtagggactaaaaacatattttagcc 4565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 6894017 - 6894069
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||| |||||||||  ||||||||| ||||||||||||||||||||||    
T  6894017 ggaccaaaacctaaactcgtcatatttgcaaggaccaaaaacatattttagcc 6894069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 31540528 - 31540496
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||    
T  31540528 tatatttgcagggaccaaaaacatattttagcc 31540496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 14809215 - 14809165
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||| |||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  14809215 ggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 27570096 - 27570058
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  27570096 aaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 293884 - 293828
Alignment:
Q  13 acatggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||| ||||  |  |||||||||||||| |||| ||||||||||||    
T  293884 acatggactaaaatcaaaacgaggcatatttgcagggactaaaaccatattttagcc 293828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 1104910 - 1104858
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  1104910 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaccatattttagcc 1104858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 3954084 - 3954052
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||| ||||||||||||||||||||||    
T  3954084 tatatttgcaaggaccaaaaacatattttagcc 3954052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 20986037 - 20986089
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  20986037 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaccatattttagcc 20986089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 31541649 - 31541681
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||| ||||||||||||||||||    
T  31541649 tatatttgcagggatcaaaaacatattttagcc 31541681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 35604459 - 35604419
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| |||||||||||  ||||||||||||||||||||    
T  35604459 aaactcgttatatttgcagaaaccaaaaacatattttagcc 35604419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 37271654 - 37271706
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  37271654 ggactaaaatcaaaacgagacatatttgcagggaccaaaaccatattttagcc 37271706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 23469988 - 23470028
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23469988 aaactcgctatatttgcagggaccaaaaacatattttagcc 23470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 27262948 - 27262908
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27262948 aaactcgctatatttgcagggaccaaaaacatattttagcc 27262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 9774907 - 9774947
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  9774907 aaactcgctatatttgcagggaccaaaagcatattttagcc 9774947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 11711276 - 11711312
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  11711276 tcgctatatttgcagggaccaaaaacatattttagcc 11711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 20723711 - 20723747
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  20723711 tcgctatatttgcagggaccaaaaacatattttagcc 20723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 24427388 - 24427428
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  24427388 aaactcgctatatttgtagggaccaaaaacatattttagcc 24427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 24609959 - 24609919
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24609959 aaactcgccatatttgcagggaccaaaaacatattttagcc 24609919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 26865191 - 26865243
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  26865191 ggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttagcc 26865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 27264235 - 27264275
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  27264235 aaactcgctatatttgcagggaccaaaatcatattttagcc 27264275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 35911895 - 35911947
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  35911895 ggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttagcc 35911947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 45979519 - 45979555
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  45979519 tcgctatatttgcagggaccaaaaacatattttagcc 45979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 46075069 - 46075109
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  46075069 aaactcgctatatttgcagggatcaaaaacatattttagcc 46075109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 35722297 - 35722344
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  35722297 aaaatccaaattcgctatatttacagggaccaaaaacatattttagcc 35722344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 37395668 - 37395633
Alignment:
Q  34 cgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  37395668 cgctatatttgcagggaccaaaaacatattttagcc 37395633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 48857194 - 48857241
Alignment:
Q  19 actaaaatctaaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  48857194 actaaaatctaaattcgttatatttgcaaggaccaaaaacatatttta 48857241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 9774077 - 9774040
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  9774077 aaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 51240166 - 51240121
Alignment:
Q  22 aaaatctaaactcgctatatttgcagggaccaaaaacatattttag 67  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||    
T  51240166 aaaatccaaattcgctatatttgcagagaccaaaaacatattttag 51240121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 26863896 - 26863860
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  26863896 tcgctatatttgcagggaccaaaaacacattttagcc 26863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 35721133 - 35721101
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||    
T  35721133 tatatttgcagggaccaaaaacatattttagcc 35721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 37396863 - 37396899
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37396863 tcgctatatttgcagggaccaaaagcatattttagcc 37396899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 47038906 - 47038866
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  47038906 aaactagctatatttgcagggactaaaaacatattttagcc 47038866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 48594067 - 48594107
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  48594067 aaactcgccatatttacagggaccaaaaacatattttagcc 48594107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 48598678 - 48598718
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  48598678 aaactcgccatatttacagggaccaaaaacatattttagcc 48598718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 50164443 - 50164403
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  50164443 aaactcgccatatttgcagggaccaaaagcatattttagcc 50164403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 39163046 - 39163083
Alignment:
Q  32 ctcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  39163046 ctcgccatatttgcagggaccaaaagcatattttagcc 39163083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 2604146 - 2604186
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| | |||||||||||||| |||||||||||||||||    
T  2604146 aaactccccatatttgcagggactaaaaacatattttagcc 2604186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 10631476 - 10631528
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||||  || ||||||||||||||||||| ||||||||||||    
T  10631476 ggactaaaaccaaaacgagccatatttgcagggaccaaaaccatattttagcc 10631528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 17977582 - 17977618
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  17977582 tcgctatatttgcagggaccaaaaccatatttaagcc 17977618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 20722508 - 20722472
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| || |||||||||    
T  20722508 tcgctatatttgcagggaccaaaagcacattttagcc 20722472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 24611136 - 24611176
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||  |||||| |||||||||||||||||||||||||    
T  24611136 aaactcgtcatatttacagggaccaaaaacatattttagcc 24611176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 33000357 - 33000305
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  33000357 ggactaaaatcaaaacgaggcatatttgcagggaccaaaaccatattttagcc 33000305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 33234860 - 33234912
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| ||||  |  ||||||||||||||||||| ||||||||||||    
T  33234860 ggactaaaatcaaaacgaggcatatttgcagggaccaaaatcatattttagcc 33234912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 34934770 - 34934806
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  34934770 tcgctatatttgcagggacaaaaagcatattttagcc 34934806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 40718422 - 40718474
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||| |||||    ||||||||||||||||||| ||||||||||||    
T  40718422 ggactaaaatcaaaactatgcatatttgcagggaccaaaaccatattttagcc 40718474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 46073937 - 46073885
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||| | ||| | |||||||||||||||| ||||| ||||||||||||    
T  46073937 ggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagcc 46073885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 48334155 - 48334191
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  48334155 tcgctatatttgtagggaccaaaagcatattttagcc 48334191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 48588980 - 48589020
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| | |||||| |||||||||||||||||||||||||    
T  48588980 aaactcaccatatttacagggaccaaaaacatattttagcc 48589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 9974 - 9922
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  9974 ggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttagcc 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 202631 - 202579
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  202631 ggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttagcc 202579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 345920 - 345956
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  345920 tcgctatatttgcagggaccaaaaacatattttagcc 345956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 376388 - 376428
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  376388 aaactcgctatatttgcagggaccaaaagcatattttagcc 376428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 374375 - 374335
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  374375 aaactcgctatatttgcagggatcaaaatcatattttagcc 374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 344977 - 344937
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| ||||||||||||||||||| ||||||| ||||    
T  344977 aaactcgccatatttgcagggaccaaaatcatatttgagcc 344937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 11546 - 11581
Alignment:
Q  34 cgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  11546 cgctatatttgcagggaccaaaaacatattttagcc 11581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 10351 - 10315
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  10351 tcgctatatttgcagggaccaaaagcatattttagcc 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 1900 - 1863
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatatttta 66  Q
    |||||||||||||||||||||||||||| |||||||||    
T  1900 aaactcgctatatttgcagggaccaaaatcatatttta 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 450 - 490
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  450 aaactcactatatttgcagggaccaaaatcatattttagcc 490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 29781 - 29729
Alignment:
Q  17 ggactaaaatctaaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||| |||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  29781 ggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttagcc 29729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 30926 - 30966
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  30926 aaactcactatatttgcagggaccaaaaccatattttagcc 30966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 119629 - 119593
Alignment:
Q  33 tcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||||||| ||||||||||||    
T  119629 tcgctatatttgcagggaccaaaagcatattttagcc 119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 121004 - 121044
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  121004 aaactcgttatatttgcagggaccaaaagcatattttagcc 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 1154 - 1194
Alignment:
Q  29 aaactcgctatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  1154 aaactcgccatatttgcagagaccaaaaatatattttagcc 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 16756 - 16724
Alignment:
Q  37 tatatttgcagggaccaaaaacatattttagcc 69  Q
    |||||||||||||||||||| ||||||||||||    
T  16756 tatatttgcagggaccaaaatcatattttagcc 16724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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