View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16633_high_11 (Length: 227)
Name: NF16633_high_11
Description: NF16633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16633_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 37497818 - 37497650
Alignment:
| Q |
13 |
cagagaccacaatgaaaatcttagttgagccctagtatcaattttctccctccaaatttcttttatgaaaaatttgcacagtagttacagtttgcatagc |
112 |
Q |
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| T |
37497818 |
cagaaaccacaatgaaaatcttagttgagccctagtatcaattttctccctccaaatttcttttatgaaaaatttgcacagtagttacagtttgcatagc |
37497719 |
T |
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| Q |
113 |
gcaagaggcacaaaaaacatgcattcaagacacattttttgtccataatttaatttcagtatacaattg |
181 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37497718 |
gcaagcggcacaaaaaacatgcattcaagacacattttttgtccataatttaatttcagtatacaattg |
37497650 |
T |
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