View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16633_high_8 (Length: 275)
Name: NF16633_high_8
Description: NF16633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16633_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 36465013 - 36465256
Alignment:
| Q |
18 |
tccttcaagagagcatttataaaatttgattcaaatggattcaagaagagaagttgaggaatcatcaacagctcccatcctagaatccaaaaggacaaga |
117 |
Q |
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| T |
36465013 |
tccttcaagagagcatttataaaatttgattcaaatggattcaagaagagaagttgaggaatcatcaacagctcccatcctagaatccaaaaggacaaga |
36465112 |
T |
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| Q |
118 |
agcaatggaaaagggaaatccattgatggagatcgttctcctccacatgctgcaactgttgttaccacaaaagctacttcactacaaaaaggtggaatga |
217 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36465113 |
agcaatggaaaagggaaatccattgatggagatcattctcctccacatgctgcaactgttgttaccacaaaagctactccactacaaaaaggtggaatga |
36465212 |
T |
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| Q |
218 |
aaaagggaattgcaatcttagactttattttgaggcttggtgcc |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36465213 |
aaaagggaattgcaatcttagactttattttgaggcttggtgcc |
36465256 |
T |
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