View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16634_low_25 (Length: 309)

Name: NF16634_low_25
Description: NF16634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16634_low_25
NF16634_low_25
[»] chr2 (32 HSPs)
chr2 (116-309)||(28617826-28618016)
chr2 (238-309)||(11258817-11258889)
chr2 (239-309)||(38840499-38840570)
chr2 (238-308)||(18905995-18906065)
chr2 (239-297)||(36449802-36449860)
chr2 (239-309)||(7899888-7899959)
chr2 (236-309)||(22848212-22848286)
chr2 (236-309)||(18300731-18300804)
chr2 (236-304)||(18868945-18869013)
chr2 (243-309)||(38839270-38839337)
chr2 (236-308)||(13030311-13030383)
chr2 (236-297)||(32739644-32739705)
chr2 (239-309)||(7898715-7898786)
chr2 (239-309)||(18299397-18299468)
chr2 (239-309)||(22587960-22588030)
chr2 (247-309)||(23869541-23869604)
chr2 (236-305)||(802601-802671)
chr2 (238-292)||(13567995-13568049)
chr2 (236-309)||(18797268-18797342)
chr2 (243-308)||(41879219-41879285)
chr2 (239-292)||(18904391-18904444)
chr2 (236-297)||(24475245-24475306)
chr2 (253-309)||(41878132-41878189)
chr2 (243-305)||(810791-810854)
chr2 (239-309)||(1034475-1034546)
chr2 (239-290)||(36450947-36450998)
chr2 (236-309)||(22587522-22587595)
chr2 (240-298)||(24476862-24476920)
chr2 (236-297)||(11938808-11938868)
chr2 (239-292)||(13570581-13570634)
chr2 (238-309)||(18869169-18869242)
chr2 (236-269)||(21837302-21837335)
[»] chr4 (40 HSPs)
chr4 (236-305)||(49308038-49308107)
chr4 (239-306)||(1290207-1290275)
chr4 (236-309)||(19750581-19750655)
chr4 (236-309)||(19789151-19789225)
chr4 (235-309)||(1835108-1835183)
chr4 (239-309)||(12129647-12129718)
chr4 (239-308)||(8758844-8758914)
chr4 (236-309)||(31599810-31599884)
chr4 (238-309)||(25685828-25685900)
chr4 (238-309)||(26421628-26421700)
chr4 (238-309)||(31600991-31601063)
chr4 (236-309)||(8155757-8155832)
chr4 (239-309)||(10471394-10471465)
chr4 (236-309)||(5525380-5525454)
chr4 (236-309)||(13509365-13509439)
chr4 (236-297)||(17383013-17383074)
chr4 (238-309)||(5526132-5526204)
chr4 (239-309)||(1963220-1963291)
chr4 (239-309)||(35935539-35935610)
chr4 (236-309)||(17388217-17388291)
chr4 (236-309)||(25684955-25685029)
chr4 (236-309)||(48780269-48780343)
chr4 (236-309)||(14868910-14868983)
chr4 (236-309)||(14876951-14877024)
chr4 (239-309)||(8757698-8757769)
chr4 (240-295)||(49306799-49306854)
chr4 (239-309)||(52491613-52491684)
chr4 (238-309)||(1834142-1834215)
chr4 (236-309)||(13386538-13386612)
chr4 (247-308)||(21539078-21539140)
chr4 (237-308)||(37728572-37728644)
chr4 (243-309)||(10447035-10447102)
chr4 (239-309)||(10470570-10470641)
chr4 (238-309)||(13386037-13386111)
chr4 (238-292)||(3927689-3927743)
chr4 (236-309)||(10448266-10448340)
chr4 (236-309)||(21178017-21178091)
chr4 (236-309)||(35934363-35934437)
chr4 (114-203)||(41294206-41294293)
chr4 (131-203)||(20215228-20215297)
[»] chr8 (36 HSPs)
chr8 (236-309)||(18978040-18978114)
chr8 (238-309)||(1824084-1824156)
chr8 (238-309)||(1858529-1858601)
chr8 (236-306)||(18970931-18971002)
chr8 (236-309)||(5514002-5514076)
chr8 (239-309)||(12351945-12352016)
chr8 (236-309)||(22221370-22221444)
chr8 (236-309)||(22227712-22227786)
chr8 (236-309)||(24488686-24488759)
chr8 (238-309)||(10006367-10006439)
chr8 (239-309)||(12353367-12353437)
chr8 (239-309)||(29968343-29968414)
chr8 (236-309)||(5003104-5003178)
chr8 (239-309)||(10007769-10007840)
chr8 (236-302)||(11287797-11287864)
chr8 (236-309)||(8388483-8388557)
chr8 (236-298)||(18979138-18979200)
chr8 (236-309)||(32207331-32207405)
chr8 (236-308)||(24122903-24122976)
chr8 (238-309)||(22220411-22220483)
chr8 (239-309)||(1823576-1823647)
chr8 (239-309)||(1858021-1858092)
chr8 (239-309)||(24123904-24123975)
chr8 (239-309)||(30335663-30335734)
chr8 (236-309)||(30336507-30336581)
chr8 (236-306)||(45114526-45114596)
chr8 (236-309)||(38974816-38974890)
chr8 (236-309)||(38980050-38980124)
chr8 (236-309)||(39005914-39005988)
chr8 (236-309)||(39011147-39011221)
chr8 (236-309)||(5514277-5514350)
chr8 (243-306)||(8389698-8389762)
chr8 (239-306)||(11282032-11282100)
chr8 (274-309)||(24359866-24359902)
chr8 (236-292)||(32968477-32968533)
chr8 (236-292)||(32973960-32974016)
[»] chr7 (27 HSPs)
chr7 (236-309)||(18372463-18372537)
chr7 (237-308)||(18371446-18371518)
chr7 (236-309)||(31659644-31659718)
chr7 (236-309)||(127357-127430)
chr7 (234-309)||(22630458-22630534)
chr7 (236-309)||(3227600-3227674)
chr7 (237-309)||(42886292-42886365)
chr7 (238-309)||(17782559-17782631)
chr7 (234-309)||(31949341-31949417)
chr7 (243-309)||(22629514-22629581)
chr7 (236-309)||(3227128-3227202)
chr7 (236-309)||(31949808-31949882)
chr7 (236-309)||(14999161-14999234)
chr7 (236-309)||(17781682-17781756)
chr7 (236-309)||(21505435-21505509)
chr7 (236-309)||(47369802-47369876)
chr7 (236-289)||(34174010-34174063)
chr7 (238-298)||(7501870-7501930)
chr7 (238-309)||(47525373-47525445)
chr7 (236-287)||(20163585-20163636)
chr7 (238-289)||(47524548-47524599)
chr7 (236-309)||(34351513-34351587)
chr7 (239-292)||(11658403-11658456)
chr7 (236-292)||(48934927-48934983)
chr7 (239-309)||(128607-128678)
chr7 (239-309)||(7500478-7500549)
chr7 (131-203)||(48066891-48066961)
[»] chr5 (33 HSPs)
chr5 (236-309)||(7311611-7311685)
chr5 (236-309)||(19752932-19753006)
chr5 (239-309)||(25523093-25523164)
chr5 (236-309)||(19754136-19754210)
chr5 (239-309)||(22940629-22940699)
chr5 (239-309)||(28538700-28538771)
chr5 (237-309)||(25056387-25056460)
chr5 (236-307)||(36486496-36486568)
chr5 (239-309)||(18486908-18486979)
chr5 (236-309)||(5777920-5777994)
chr5 (236-298)||(33158119-33158181)
chr5 (236-292)||(1796075-1796131)
chr5 (238-309)||(5778842-5778914)
chr5 (236-307)||(28539828-28539900)
chr5 (239-309)||(16650861-16650932)
chr5 (235-289)||(34893685-34893739)
chr5 (239-308)||(18154518-18154586)
chr5 (243-306)||(24332941-24333005)
chr5 (243-309)||(33160292-33160359)
chr5 (256-309)||(25524104-25524158)
chr5 (238-309)||(25055435-25055507)
chr5 (236-292)||(25524151-25524207)
chr5 (247-306)||(40255681-40255741)
chr5 (236-291)||(2685765-2685820)
chr5 (244-306)||(5730871-5730934)
chr5 (239-298)||(20214219-20214278)
chr5 (137-203)||(35763030-35763093)
chr5 (236-306)||(36485321-36485392)
chr5 (238-292)||(18485161-18485215)
chr5 (239-296)||(5730466-5730523)
chr5 (258-306)||(21835083-21835132)
chr5 (253-309)||(42195170-42195227)
chr5 (241-308)||(5962579-5962647)
[»] chr3 (40 HSPs)
chr3 (236-309)||(12700194-12700268)
chr3 (239-309)||(7267667-7267738)
chr3 (239-306)||(7758426-7758494)
chr3 (236-306)||(29931247-29931318)
chr3 (236-306)||(29980401-29980472)
chr3 (239-309)||(54540796-54540867)
chr3 (236-309)||(8456498-8456572)
chr3 (238-309)||(12703506-12703578)
chr3 (238-309)||(47610586-47610658)
chr3 (238-309)||(47614208-47614280)
chr3 (239-298)||(55192013-55192072)
chr3 (236-309)||(22776818-22776892)
chr3 (238-307)||(29932707-29932776)
chr3 (238-307)||(29981861-29981930)
chr3 (236-308)||(24516481-24516554)
chr3 (238-309)||(534522-534594)
chr3 (236-307)||(7268835-7268907)
chr3 (236-292)||(19984870-19984926)
chr3 (234-309)||(51469991-51470067)
chr3 (236-290)||(5001221-5001275)
chr3 (236-309)||(5029689-5029763)
chr3 (236-309)||(47609718-47609792)
chr3 (236-309)||(52840610-52840684)
chr3 (239-308)||(54539779-54539849)
chr3 (242-309)||(31645000-31645068)
chr3 (236-309)||(535788-535862)
chr3 (236-309)||(18442652-18442726)
chr3 (236-309)||(19487726-19487800)
chr3 (239-308)||(34019152-34019222)
chr3 (236-308)||(51470462-51470535)
chr3 (239-307)||(6249633-6249701)
chr3 (254-309)||(8875945-8876001)
chr3 (237-308)||(49216269-49216341)
chr3 (239-309)||(51037559-51037630)
chr3 (237-306)||(11671350-11671420)
chr3 (236-309)||(18456069-18456143)
chr3 (236-309)||(28262213-28262287)
chr3 (236-309)||(46721226-46721300)
chr3 (236-273)||(22775796-22775833)
chr3 (239-291)||(6170296-6170348)
[»] chr1 (40 HSPs)
chr1 (238-309)||(24426081-24426153)
chr1 (239-309)||(24422824-24422895)
chr1 (236-309)||(36613910-36613984)
chr1 (236-309)||(52274989-52275063)
chr1 (236-309)||(45149976-45150051)
chr1 (236-309)||(39699773-39699847)
chr1 (236-309)||(43058806-43058880)
chr1 (239-306)||(11437208-11437276)
chr1 (236-292)||(14999305-14999361)
chr1 (239-306)||(45148605-45148672)
chr1 (236-309)||(41364849-41364923)
chr1 (238-309)||(33088623-33088695)
chr1 (236-292)||(45157233-45157289)
chr1 (238-309)||(51685771-51685843)
chr1 (239-305)||(39222483-39222550)
chr1 (239-309)||(44404466-44404537)
chr1 (239-309)||(51684390-51684461)
chr1 (239-309)||(37526884-37526954)
chr1 (239-309)||(39698587-39698657)
chr1 (236-309)||(52827368-52827442)
chr1 (236-309)||(35594238-35594310)
chr1 (239-306)||(11436066-11436134)
chr1 (238-309)||(23980472-23980544)
chr1 (243-306)||(39153125-39153189)
chr1 (237-309)||(41366137-41366209)
chr1 (237-309)||(46066545-46066617)
chr1 (239-306)||(50680355-50680423)
chr1 (238-309)||(52276169-52276241)
chr1 (238-309)||(52828076-52828148)
chr1 (239-309)||(7675465-7675536)
chr1 (238-308)||(43060013-43060084)
chr1 (239-308)||(43378720-43378790)
chr1 (243-292)||(39151959-39152008)
chr1 (236-292)||(7674548-7674603)
chr1 (239-306)||(7983073-7983141)
chr1 (243-309)||(35067008-35067075)
chr1 (234-288)||(14999983-15000037)
chr1 (129-203)||(27054093-27054164)
chr1 (238-309)||(35595198-35595271)
chr1 (252-296)||(44411986-44412030)
[»] scaffold0294 (2 HSPs)
scaffold0294 (236-309)||(5444-5518)
scaffold0294 (236-309)||(4463-4537)
[»] chr6 (23 HSPs)
chr6 (236-309)||(1829609-1829683)
chr6 (238-309)||(8659288-8659360)
chr6 (238-308)||(8821896-8821967)
chr6 (236-309)||(27322074-27322148)
chr6 (239-292)||(16704521-16704574)
chr6 (238-306)||(26575063-26575132)
chr6 (239-309)||(8822799-8822870)
chr6 (236-290)||(27318335-27318389)
chr6 (243-307)||(14822388-14822453)
chr6 (238-309)||(7314903-7314974)
chr6 (239-309)||(10784617-10784688)
chr6 (234-296)||(3722527-3722589)
chr6 (236-309)||(10785919-10785993)
chr6 (247-307)||(14823583-14823644)
chr6 (236-306)||(17496818-17496890)
chr6 (238-309)||(3721635-3721707)
chr6 (237-308)||(8660211-8660282)
chr6 (234-309)||(34834585-34834661)
chr6 (239-309)||(7316300-7316371)
chr6 (238-309)||(26574642-26574713)
chr6 (239-308)||(27437852-27437922)
chr6 (240-309)||(34830927-34830997)
chr6 (238-291)||(6842308-6842361)
[»] scaffold0302 (2 HSPs)
scaffold0302 (239-297)||(17494-17552)
scaffold0302 (237-298)||(18794-18855)
[»] scaffold0320 (1 HSPs)
scaffold0320 (243-306)||(19516-19580)
[»] scaffold0019 (2 HSPs)
scaffold0019 (243-309)||(61465-61532)
scaffold0019 (238-309)||(60113-60185)
[»] scaffold0059 (2 HSPs)
scaffold0059 (236-309)||(3696-3770)
scaffold0059 (234-292)||(4754-4812)
[»] scaffold1303 (1 HSPs)
scaffold1303 (238-309)||(1462-1534)
[»] scaffold0186 (2 HSPs)
scaffold0186 (236-309)||(23100-23174)
scaffold0186 (234-299)||(23907-23972)
[»] scaffold0093 (2 HSPs)
scaffold0093 (236-308)||(2472-2546)
scaffold0093 (236-308)||(7095-7169)
[»] scaffold0112 (1 HSPs)
scaffold0112 (253-309)||(37185-37242)
[»] scaffold0586 (2 HSPs)
scaffold0586 (258-309)||(6386-6438)
scaffold0586 (273-309)||(9033-9069)
[»] scaffold2034 (1 HSPs)
scaffold2034 (239-309)||(257-328)
[»] scaffold0632 (1 HSPs)
scaffold0632 (236-309)||(3314-3388)
[»] scaffold0227 (1 HSPs)
scaffold0227 (236-309)||(125-199)
[»] scaffold0003 (1 HSPs)
scaffold0003 (239-308)||(49440-49510)
[»] scaffold0049 (1 HSPs)
scaffold0049 (258-309)||(7421-7473)
[»] scaffold0045 (1 HSPs)
scaffold0045 (239-291)||(49109-49161)


Alignment Details
Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 116 - 309
Target Start/End: Original strand, 28617826 - 28618016
Alignment:
Q  116 caaacttgtcactcctgtcaagcgcagacatgtgtcagagaagggaactcattcccctggcatttcaaatggcgggaatgaggaaaacaacnnnnnnnng 215  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||        |    
T  28617826 caaacttgtcactcctgtcaagcgcatacatgtgtcagagaagggaactcattcc--tgccatttcaaatggcgggaatgaggaaaacgacaaaaaaaag 28617923  T
Q  216 cataaagtgcannnnnnnctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28617924 cataaagtacatttttt-ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccctaagatttagcc 28618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 11258889 - 11258817
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  11258889 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcc 11258817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 38840570 - 38840499
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  38840570 taactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagcc 38840499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 18906065 - 18905995
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagc 308  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||  |||||||||||||||    
T  18906065 ctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccctaagatttagc 18905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 36449802 - 36449860
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  36449802 taactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccc 36449860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 7899959 - 7899888
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||||||    
T  7899959 taactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcc 7899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 22848212 - 22848286
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||||| |||| || |||||||||||||||||| || |||||||||||||||    
T  22848212 ccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcc 22848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 18300804 - 18300731
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||| || |||||||||||| ||||| |||||||||||||||||||||| ||||||  ||||||||    
T  18300804 ccctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccctataatttagcc 18300731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 18868945 - 18869013
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatt 304  Q
    ||||||||||||||| ||||||||||||||| || || |||||||||||||||||||  ||||||||||    
T  18868945 ccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttgatccctaagatt 18869013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 38839270 - 38839337
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| ||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||    
T  38839270 tttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagcc 38839337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 13030311 - 13030383
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaa-ttttgccccctaagatttagc 308  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||| ||||| |||||||||||||||||||||    
T  13030311 ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttttgccccctaagatttagc 13030383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 32739644 - 32739705
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    ||||||||||||||| |||||||||||||||||  | |||||||||||||||||||| ||||    
T  32739644 ccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggcccc 32739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 7898715 - 7898786
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||| ||| || ||||| | ||||||||||||| ||||||||||||||||||    
T  7898715 taactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagcc 7898786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 18299397 - 18299468
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||| ||||||||||| || ||||| ||||||||||||||| |||||||| |||||||||    
T  18299397 taactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcc 18299468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 22588030 - 22587960
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||||| |||| | ||||||||||||||||||| ||||| ||||||||||||    
T  22588030 taactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaattttggccccttaagatttagcc 22587960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 309
Target Start/End: Complemental strand, 23869604 - 23869541
Alignment:
Q  247 aaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||| |||||||||||||||||| || |||||||||||||||||| || |||||||||||||||    
T  23869604 aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcc 23869541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 802671 - 802601
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattt 305  Q
    |||||| |||||||| ||||||||||||||||||   |||||||||||||||||||| ||| |||||||||    
T  802671 ccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattt 802601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 13567995 - 13568049
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||| |||||||| |||||||||||||||||| || |||||||||||||||||||    
T  13567995 ctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 18797268 - 18797342
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||  |||||  ||||||||||||||| |||||||| ||||||||    
T  18797268 ccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcc 18797342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 41879285 - 41879219
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||||||  |||||||| |||||||    
T  41879285 tttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagc 41879219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 18904391 - 18904444
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||| | |||||||||||||||  ||||||||||||||||||||||    
T  18904391 taactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttg 18904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 24475245 - 24475306
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    ||||||||||||||| |||| |||||| |||||| ||||| |||||||||||||||| ||||    
T  24475245 ccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggcccc 24475306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 41878132 - 41878189
Alignment:
Q  253 ttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  41878132 ttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcc 41878189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 810854 - 810791
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattt 305  Q
    |||||||| ||||||||||||||||||   |||||||||||||||||||| ||| |||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattt 810791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 1034546 - 1034475
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| | |||||||||||||||| | |||| ||||| ||||||| | |||||||||||||||||    
T  1034546 taactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 290
Target Start/End: Complemental strand, 36450998 - 36450947
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt 290  Q
    |||||||||||| ||||||||||||| |||| ||||||| ||||||||||||    
T  36450998 taactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattt 36450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 22587522 - 22587595
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  || ||||||||| |||| |  |||||||||||||||||| ||||||||||||||||||    
T  22587522 ccctaactttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcc 22587595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 24476920 - 24476862
Alignment:
Q  240 aactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    |||||| |||| |||| |||||||| |||| |||||||||||||||||||||| |||||    
T  24476920 aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccct 24476862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 11938868 - 11938808
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    ||||||||||||||| ||||||||||||| | || ||||||||||| || ||||||||||||    
T  11938868 ccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgccccc 11938808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 13570634 - 13570581
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||| ||||||||||| | |||  |||||||||||||| |||||||    
T  13570634 taactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttg 13570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 18869242 - 18869169
Alignment:
Q  238 ctaactttcaaaatcttg-caattttggccccccaagtacaaaaactacaa-ttttgccccctaagatttagcc 309  Q
    |||||||||||||  ||| |||||||||||  | ||||||||||||||||| ||||  ||||||||||||||||    
T  18869242 ctaactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcc 18869169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 21837335 - 21837302
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccc 269  Q
    ||||||||||||||| ||||||||||||||||||    
T  21837335 ccctaactttcaaaaacttgcaattttggccccc 21837302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 49308107 - 49308038
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagattt 305  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  49308107 ccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccctatgattt 49308038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 1290275 - 1290207
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||    
T  1290275 taactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagattta 1290207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 19750655 - 19750581
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  19750655 ccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagcc 19750581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 19789151 - 19789225
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  19789151 ccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagcc 19789225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 1835183 - 1835108
Alignment:
Q  235 tccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||||||| |||||||||||| ||||| |||||  ||||||||||||||| |||||||||||||||||    
T  1835183 tccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 1835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 12129647 - 12129718
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||    
T  12129647 taactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcc 12129718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 8758914 - 8758844
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||    
T  8758914 taactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagc 8758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 31599810 - 31599884
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||    
T  31599810 ccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcc 31599884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 25685900 - 25685828
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  25685900 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcc 25685828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 26421700 - 26421628
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||| || || |||||||||||||||||||||| |||| ||||||||||||    
T  26421700 ctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagcc 26421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 31601063 - 31600991
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||| |||| |||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||    
T  31601063 ctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcc 31600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 8155757 - 8155832
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggc-cccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||| || |||| |||| |||||||||||||||| ||||||||||||||||||    
T  8155757 ccctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagcc 8155832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 10471465 - 10471394
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  10471465 taactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 10471394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 5525380 - 5525454
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  5525380 ccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 5525454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 13509439 - 13509365
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||    
T  13509439 ccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcc 13509365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 17383013 - 17383074
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    ||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||| ||||    
T  17383013 ccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggcccc 17383074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 5526204 - 5526132
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||| ||||||| | |||||||||||||||||    
T  5526204 ctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagcc 5526132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 1963220 - 1963291
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||  |||||||||||||| || | ||||||||||||||||||| ||||||||||| ||||||    
T  1963220 taactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcc 1963291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 35935610 - 35935539
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| ||||  |||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  35935610 taacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcc 35935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 17388291 - 17388217
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||||| |||  ||||||| ||||||||||||| |||||| |||| ||||||    
T  17388291 ccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcc 17388217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 25684955 - 25685029
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||| | |||||| ||||| ||||||| | |||||||||||||||||    
T  25684955 ccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagcc 25685029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 48780269 - 48780343
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  48780269 ccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 48780343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 14868910 - 14868983
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||| |||||||||||||||||||||||||| | |||||  ||||| |||||||  |||||||||| ||||||    
T  14868910 ccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagcc 14868983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 14877024 - 14876951
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||| |||||||||||||||||||||||||| | |||||  ||||| |||||||  |||||||||| ||||||    
T  14877024 ccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagcc 14876951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 8757698 - 8757769
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||| ||||||| |||||| ||||||| ||||||||||||| | ||| ||||||||||||    
T  8757698 taactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagcc 8757769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 49306799 - 49306854
Alignment:
Q  240 aactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccc 295  Q
    ||||||||||| |||||||||||||||    |||||||||||||||||||||||||    
T  49306799 aactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttgccc 49306854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 52491684 - 52491613
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||||| || | || |||| ||||||||||||| ||||||||| ||||||||    
T  52491684 taactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagcc 52491613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 1834142 - 1834215
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg--ccccctaagatttagcc 309  Q
    |||||||| |||| ||| |||||||| ||||| | ||| ||||||||||||||||  |||||||||||||||||    
T  1834142 ctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcc 1834215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 13386612 - 13386538
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||  |||||| ||||| ||||||| | ||||||||||| |||||    
T  13386612 ccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcc 13386538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 21539140 - 21539078
Alignment:
Q  247 aaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    |||| ||||||||||||||| || ||||  |||||||||||||||| ||||||||||||||||    
T  21539140 aaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagc 21539078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 37728644 - 37728572
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    ||||||||| ||||  |||||||||||||| || | |||||||||||||||||||| |||  |||||||||||    
T  37728644 cctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagc 37728572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 10447035 - 10447102
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgcccc-ctaagatttagcc 309  Q
    ||||||||  |||||||||| |||||| | |||||||||| |||||||| |||| |||||||||||||    
T  10447035 tttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcc 10447102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 10470570 - 10470641
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| ||| | |||||| ||||  ||||||| | |||||||||||||||||    
T  10470570 taactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcc 10470641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 13386037 - 13386111
Alignment:
Q  238 ctaactttcaaaat-cttgcaattttggccccccaagtacaaaaactacaatt--ttgccccctaagatttagcc 309  Q
    |||||||||||||  |||||||||||||||||| |||||| ||||| ||||||  |  |||||||||||||||||    
T  13386037 ctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 3927689 - 3927743
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||| ||||| |||| |||||||||||||| |||  |||||||||||||||    
T  3927689 ctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttg 3927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 10448340 - 10448266
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| ||||||||  |||| ||||| |||||| | ||||||||||||||||||| |||| ||||||| |||||    
T  10448340 ccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcc 10448266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 21178017 - 21178091
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| ||  |||||||||||  |||| | | |||||||||||||||||| |||||||| ||||||||    
T  21178017 ccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcc 21178091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 35934363 - 35934437
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||| |||||||| |||| ||||| | ||| || |||||| ||||| ||||||||||||    
T  35934363 ccctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagcc 35934437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 203
Target Start/End: Complemental strand, 41294293 - 41294206
Alignment:
Q  114 gtcaaacttgtcactcctgtcaagcgcagacatgtgtcagagaagggaactcattcccctggcatttcaaatggcgggaatgaggaaaac 203  Q
    ||||||| |||| | ||||||| ||||||||| ||||| | ||||||  |||||||||  | | ||||||| ||||||||||||||||||    
T  41294293 gtcaaacctgtcgcgcctgtcacgcgcagacaagtgtcggggaagggggctcattccc--gccgtttcaaagggcgggaatgaggaaaac 41294206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 20215228 - 20215297
Alignment:
Q  131 tgtcaagcgcagacatgtgtcagagaagggaactcattcccctggcatttcaaatggcgggaatgaggaaaac 203  Q
    ||||| ||||||| |||||||||||| |||  |||||||||  | | ||||||||||||||||||||||||||    
T  20215228 tgtcacgcgcagatatgtgtcagagaggggg-ctcattccc--gccgtttcaaatggcgggaatgaggaaaac 20215297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 18978040 - 18978114
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  18978040 ccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcc 18978114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 1824156 - 1824084
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  1824156 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1824084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 1858601 - 1858529
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||    
T  1858601 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 18970931 - 18971002
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct-aagattta 306  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  18970931 ccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagattta 18971002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 5514002 - 5514076
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||    
T  5514002 ccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcc 5514076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 12351945 - 12352016
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||  ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  12351945 taactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 22221444 - 22221370
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||  ||||||||||||||| |||||||||||||||||    
T  22221444 ccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 22221370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 22227786 - 22227712
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||  ||||||||||||||| |||||||||||||||||    
T  22227786 ccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 22227712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 24488759 - 24488686
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| || ||  ||||| ||||||||||||| ||||||||||||    
T  24488759 ccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttgccccgtaagatttagcc 24488686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 10006367 - 10006439
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  10006367 ctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcc 10006439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 12353437 - 12353367
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||    
T  12353437 taactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagcc 12353367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 29968414 - 29968343
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatt-ttgccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||||||||| | | ||||||||||||||||    
T  29968414 taacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagcc 29968343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 5003178 - 5003104
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtac-aaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||||||||||||||||||   |||| |||||| |||||| ||||||||| ||||||||||||||||    
T  5003178 ccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccctaagatttagcc 5003104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 10007840 - 10007769
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| ||||| | |||| |||||||| | ||||||||||||||||    
T  10007840 taactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcc 10007769  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 11287797 - 11287864
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaaga 302  Q
    |||||||||| |||| |||||||||||||||| | ||||||| ||||||||||||| |||||||||||    
T  11287797 ccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaaga 11287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 8388483 - 8388557
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| ||||  |||||||||| |||||| | |||||||||||| |||||| ||||||||||||||||||    
T  8388483 ccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcc 8388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 18979200 - 18979138
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    ||||||||||||| | |||||||||||||||||| || || |||||||||||||||| |||||    
T  18979200 ccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggcccct 18979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 32207405 - 32207331
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| ||||||| |||||||||||| | ||| ||||||||||||||||||||| ||| | ||||||||||||    
T  32207405 ccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcc 32207331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 24122903 - 24122976
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||| ||||  ||||||||||| ||||| |||||||||||||| |||||| | |||||||||||||||    
T  24122903 ccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagc 24122976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 22220411 - 22220483
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| |||  |||||||||||| ||||| | ||| ||||||||||||||| ||||||||||||||||||    
T  22220411 ctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcc 22220483  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 1823576 - 1823647
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||| ||| | ||||||||||||||||||||  | ||||||||||||||||    
T  1823576 taacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcc 1823647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 1858021 - 1858092
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||| ||| | ||||||||||||||||||||  | ||||||||||||||||    
T  1858021 taacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcc 1858092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 24123975 - 24123904
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||||||| |  |||||| |||| ||||||||| ||| ||||||||||||||    
T  24123975 taactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcc 24123904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 30335663 - 30335734
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||||| | | ||||||||||| |||||||||  |||||||||||||||||    
T  30335663 taacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcc 30335734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 30336581 - 30336507
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||  |||||| ||| || |||||||||||||||||||||  ||| |||||||||||||    
T  30336581 ccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagcc 30336507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 45114596 - 45114526
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagattta 306  Q
    ||||||||||||||| |||||||||||||  | | | ||||| |||||||||||||| || ||||||||||    
T  45114596 ccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcctctaagattta 45114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 38974816 - 38974890
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  38974816 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 38974890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 38980124 - 38980050
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  38980124 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 38980050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 39005914 - 39005988
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  39005914 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 39005988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 39011221 - 39011147
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  39011221 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 39011147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 5514350 - 5514277
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||| ||| |||| ||||||||||| |||  | || ||||||||||||||||||| || |||| ||||||||    
T  5514350 ccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttgacctctaaaatttagcc 5514277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 8389762 - 8389698
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    ||||||||  |||||||||||| |||  | ||||||||||||||||||| | |||||||||||||    
T  8389762 tttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagattta 8389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11282032 - 11282100
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    ||||||| ||||  ||||||||||||||||| |  ||||||||  ||||||||| ||||||||||||||    
T  11282032 taacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagattta 11282100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 24359866 - 24359902
Alignment:
Q  274 tacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24359866 tacaaaaactacaattttgaccccctaagatttagcc 24359902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 32968477 - 32968533
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||||    
T  32968477 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttg 32968533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 32974016 - 32973960
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||||    
T  32974016 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttg 32973960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 18372537 - 18372463
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18372537 ccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcc 18372463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 18371446 - 18371518
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  18371446 cctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagc 18371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 31659644 - 31659718
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  31659644 ccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcc 31659718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 127357 - 127430
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||||| |||| |||||| ||||| ||||||| ||||||||||||||||||    
T  127357 ccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttagccccctaagatttagcc 127430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 22630534 - 22630458
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||| |||||||||||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||    
T  22630534 ctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcc 22630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 3227674 - 3227600
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgc-cccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| || ||||||||||||||||    
T  3227674 ccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcc 3227600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 42886365 - 42886292
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||  ||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||    
T  42886365 cctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcc 42886292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 17782631 - 17782559
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  17782631 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 17782559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 31949341 - 31949417
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||| |||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  31949341 ctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 31949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 22629514 - 22629581
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  22629514 tttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcc 22629581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 3227128 - 3227202
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc-taagatttagcc 309  Q
    |||||| |||||||| |||||||||||||||||| |||||| ||||| ||||||| |||||| ||||||||||||    
T  3227128 ccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagcc 3227202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 31949882 - 31949808
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgc-cccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||| || ||||||||||||||||    
T  31949882 ccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagcc 31949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 14999234 - 14999161
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| |||||||| |||||||||||| ||||| || |||||||||||||||||| || |||||||||||||||    
T  14999234 ccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcc 14999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 17781682 - 17781756
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| |||||||   |||||||||||||||||    
T  17781682 ccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcc 17781756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 21505435 - 21505509
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||| |  ||||||||||||||||||| |||| ||||||||||||    
T  21505435 ccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcc 21505509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 47369802 - 47369876
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||| ||| |  |||||||||||||| |||||| ||||| ||||||||||||    
T  47369802 ccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcc 47369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 34174063 - 34174010
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatt 289  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  34174063 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 7501930 - 7501870
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||| ||||||||| |||||    
T  7501930 ctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggcccct 7501870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 47525445 - 47525373
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||| |||||| |||||  ||||| ||||||| | |||||||||||||||||    
T  47525445 ctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagcc 47525373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 20163636 - 20163585
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaa 287  Q
    ||||||||||||||| |||||||||||||| ||| | |||||||||||||||    
T  20163636 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 47524548 - 47524599
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatt 289  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||    
T  47524548 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 34351513 - 34351587
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||| |||||||||| |||||||||||||| | ||||||| | |||||||||||||  |||| ||||||||||||    
T  34351513 ccctgactttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagatttagcc 34351587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 11658403 - 11658456
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||| | ||||||||| |||||| | ||||||||||||||||||||    
T  11658403 taactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttg 11658456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 48934983 - 48934927
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    ||||||||||||||| |||| ||||||| ||| | |||||||||||||| |||||||    
T  48934983 ccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 128678 - 128607
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||  ||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||| ||||    
T  128678 taactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagcc 128607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 7500478 - 7500549
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||||  || | ||||| | |||| |||||||| ||||||||||||||||||    
T  7500478 taactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcc 7500549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 48066961 - 48066891
Alignment:
Q  131 tgtcaagcgcagacatgtgtcagagaagggaactcattcccctggcatttcaaatggcgggaatgaggaaaac 203  Q
    ||||| ||||||||| ||||||| ||||||  |||||||||   |  ||||||||||||||||||||||||||    
T  48066961 tgtcacgcgcagacaagtgtcagggaagggggctcattccctccg--tttcaaatggcgggaatgaggaaaac 48066891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 7311611 - 7311685
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  7311611 ccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 19752932 - 19753006
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  19752932 ccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcc 19753006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 25523093 - 25523164
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  25523093 taactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcc 25523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 19754210 - 19754136
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||||| |||||||||    
T  19754210 ccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcc 19754136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 22940699 - 22940629
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||    
T  22940699 taactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccctaaaatttagcc 22940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 28538700 - 28538771
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||    
T  28538700 taactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcc 28538771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 25056460 - 25056387
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||||| |||||||||||| ||||| |||||  ||||||||||||||| |||||||||||||||||    
T  25056460 cctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 36486568 - 36486496
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttag 307  Q
    |||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||    
T  36486568 ccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttag 36486496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 18486979 - 18486908
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| ||||| | |||| |||||||| ||||||||||||||||||    
T  18486979 taactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcc 18486908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 5777920 - 5777994
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  5777920 ccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 5777994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 33158119 - 33158181
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    ||||||||||||||| |||||||||||| | ||| |||||||||||||||||||||| |||||    
T  33158119 ccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccct 33158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 1796075 - 1796131
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    ||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  1796075 ccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 5778914 - 5778842
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  5778914 ctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 5778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 28539900 - 28539828
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttag 307  Q
    |||||||||| |||| |||||||||||| ||| | ||||||||||||||||||||| | ||||||||||||||    
T  28539900 ccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttag 28539828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 16650932 - 16650861
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||    
T  16650932 taacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcc 16650861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 34893685 - 34893739
Alignment:
Q  235 tccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatt 289  Q
    |||||||||||||||| |||||||||||||| ||| | |||||||||||||||||    
T  34893685 tccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 18154518 - 18154586
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagc 308  Q
    |||||||||||| ||| |||||||| ||||  ||||||||||||||||||||||||| |||| |||||||    
T  18154518 taactttcaaaaacttacaattttgacccct-aagtacaaaaactacaattttgccctctaaaatttagc 18154586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 24332941 - 24333005
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||||| |||||||||||||||||  | |||||||||||||||||||| ||| ||||||||||    
T  24332941 tttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagattta 24333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 33160359 - 33160292
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||| ||||||||||| |||||| ||||| | |||||||||||||| |||| ||||||||||||    
T  33160359 tttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagcc 33160292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 25524158 - 25524104
Alignment:
Q  256 caattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||| || |||||||||||||| ||||||| |||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcc 25524104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 25055435 - 25055507
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| ||  |||||||||||||  |||| | ||| ||||||||||||||| ||||||||||||||||||    
T  25055435 ctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcc 25055507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 25524207 - 25524151
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||| ||| ||||  ||| ||||||||||||| ||||||||||||||||||||||    
T  25524207 ccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 25524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 40255741 - 40255681
Alignment:
Q  247 aaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    |||| |||||||||||| ||||| || |||| ||||||||||||| |||||||||||||||    
T  40255741 aaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagattta 40255681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 2685765 - 2685820
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt 291  Q
    |||||| |||||||| |||  |||||||| |||| |||||||||||||||||||||    
T  2685765 ccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 5730934 - 5730871
Alignment:
Q  244 ttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    ||||||| ||| |||||||||||||| |||||| ||||| ||||||| | ||||||||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagattta 5730871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20214219 - 20214278
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    |||||||||||| ||||||||||| || | | | |||||||||||||||||||| |||||    
T  20214219 taactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccct 20214278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 35763030 - 35763093
Alignment:
Q  137 gcgcagacatgtgtcagagaagggaactcattcccctggcatttcaaatggcgggaatgaggaaaac 203  Q
    |||||||||||||||||||| |||  |||||||||  | | ||||||||||||||||||||||||||    
T  35763030 gcgcagacatgtgtcagagaggggg-ctcattccc--gccgtttcaaatggcgggaatgaggaaaac 35763093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 36485321 - 36485392
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    |||||||||| |||| ||| |||||||| || |  |||||||||||||| |||||| |||||||||||||||    
T  36485321 ccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagattta 36485392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 18485161 - 18485215
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||| |||| |||||||||||||||||| |||||  ||||| |||||||||    
T  18485161 ctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttg 18485215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 5730466 - 5730523
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgcccc 296  Q
    |||||||||||| ||||||||||||||  || |||||| ||||| ||||||| |||||    
T  5730466 taactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaatttagcccc 5730523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 21835083 - 21835132
Alignment:
Q  258 attttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||| ||||| | |||||||||||||||||||| ||||||||||||||    
T  21835083 attttgaccccctatgtacaaaaactacaattttgaccccctaagattta 21835132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 42195170 - 42195227
Alignment:
Q  253 ttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||| |||||||||||| | |||||||| |||||||||| | ||||||||||||||||    
T  42195170 ttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcc 42195227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 5962647 - 5962579
Alignment:
Q  241 actttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    ||||||||||  ||| |||||||| |||| |||||||||||||| |||||| ||| ||||| |||||||    
T  5962647 actttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatatttagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 12700194 - 12700268
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  12700194 ccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagcc 12700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 7267667 - 7267738
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  7267667 taactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 7758426 - 7758494
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaa-ttttgccccctaagattta 306  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  7758426 taactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagattta 7758494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 29931247 - 29931318
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||||||||||| |||||||||||||||    
T  29931247 ccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagattta 29931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 29980401 - 29980472
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    ||||||||||||||| ||||||||||| |||||| || |||||||||||||||||| |||||||||||||||    
T  29980401 ccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagattta 29980472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 54540867 - 54540796
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||    
T  54540867 taactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcc 54540796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 8456498 - 8456572
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| |||||||| ||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||||    
T  8456498 ccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 12703578 - 12703506
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  12703578 ctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcc 12703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 47610658 - 47610586
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  47610658 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 47610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 47614208 - 47614280
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||| |||||||| ||||||||||||||||||    
T  47614208 ctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcc 47614280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 55192072 - 55192013
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    |||||||||||| |||||||||||||||| | |||||||||||||||||||||| |||||    
T  55192072 taactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccct 55192013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 22776892 - 22776818
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| ||  ||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||    
T  22776892 ccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagcc 22776818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 29932776 - 29932707
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttag 307  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||    
T  29932776 ctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaagatttag 29932707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 29981930 - 29981861
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttag 307  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||||||    
T  29981930 ctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaagatttag 29981861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 24516481 - 24516554
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||| |||| |||||||||||||| ||| ||||| ||||||||||||||| ||||| |||||||||||    
T  24516481 ccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagc 24516554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 534522 - 534594
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| |||||| |||||||||||| || || | ||||||||||||||||||| ||||||||||||||||||    
T  534522 ctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcc 534594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 7268907 - 7268835
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttag 307  Q
    ||||||||||||||| ||||||||||||||| || ||||| | ||||||||||||| ||| ||||||||||||    
T  7268907 ccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttag 7268835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 19984870 - 19984926
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  19984870 ccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 19984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 51469991 - 51470067
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    |||||||| |||||||| |||||||||||||||||| |||||| ||||| |||||||   |||||||||||||||||    
T  51469991 ctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagcc 51470067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 5001221 - 5001275
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt 290  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  5001221 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 5029763 - 5029689
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaa-ttttgccccctaagatttagcc 309  Q
    ||||| ||||||||||||||||||||||||| || |||||| ||||| |||| |||| |||||||||| ||||||    
T  5029763 ccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagcc 5029689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 47609718 - 47609792
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| |||||||   |||||||||||||||||    
T  47609718 ccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcc 47609792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 52840684 - 52840610
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||| ||| || ||  ||||| ||||||||| |||||||||||||||||    
T  52840684 ccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagcc 52840610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 54539779 - 54539849
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    |||||||||||| |||||||||||  ||||| || |||||||||||||||||||  |||||||||||||||    
T  54539779 taactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagc 54539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 31645000 - 31645068
Alignment:
Q  242 ctttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||| ||| |||||||||||||| |||| ||||||||||||||||  || ||||||||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcc 31645068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 535862 - 535788
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||||| |||  |||||  ||||||| ||||||  |||||||||||||||||    
T  535862 ccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagcc 535788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 18442652 - 18442726
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  |||||||||||||| |||||||| | |||||||    
T  18442652 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcc 18442726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 19487726 - 19487800
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  |||||||||||||| |||||||| | |||||||    
T  19487726 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaattttggccccctatgttttagcc 19487800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 34019222 - 34019152
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||||| |||||||||||| ||||| | ||||||| ||||||||||| | ||||||| |||||||    
T  34019222 taactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagc 34019152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 51470535 - 51470462
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgc-cccctaagatttagc 308  Q
    ||||||||||||||| |||||||||| |  |||| |||||| ||||| ||||||| || |||||||||||||||    
T  51470535 ccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagc 51470462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 6249633 - 6249701
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttag 307  Q
    |||||||||||| |||||||||||   |||  |||||||||||||||||||||  ||| ||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaattttatcccttaagatttag 6249701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 8875945 - 8876001
Alignment:
Q  254 tgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||| |||||  | ||||||||||||||||||| ||||||||||||||||||    
T  8875945 tgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagcc 8876001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 49216269 - 49216341
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    ||||| ||||||||  ||||||||||| ||||| | ||||||||||||||||| || |||| |||||||||||    
T  49216269 cctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagc 49216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 51037559 - 51037630
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||  ||||||||||| ||| | | | ||||||||||||||||| ||||||||||| ||||||    
T  51037559 taactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcc 51037630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 11671420 - 11671350
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactaca-attttgccccctaagattta 306  Q
    |||||||||||||| ||||||||||| |||||| || || |||||||||| ||||  ||||||| ||||||    
T  11671420 cctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgattta 11671350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 18456143 - 18456069
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  18456143 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 18456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 28262213 - 28262287
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  28262213 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 28262287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 46721300 - 46721226
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| ||||  |||| |||||  ||||| | ||||||||||||||||||| | ||||||||||||||||    
T  46721300 ccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcc 46721226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 22775796 - 22775833
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaag 273  Q
    |||||||||||||||  |||||||||||||||||||||    
T  22775796 ccctaactttcaaaaagttgcaattttggccccccaag 22775833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt 291  Q
    |||||||||||| ||||||||||||  |||  ||||||||||| |||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 24426153 - 24426081
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  24426153 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcc 24426081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 24422824 - 24422895
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24422824 taactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcc 24422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 36613984 - 36613910
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  36613984 ccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcc 36613910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 52274989 - 52275063
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||    
T  52274989 ccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcc 52275063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 45150051 - 45149976
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgc--cccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||| ||||||||||  ||||||||||||||||    
T  45150051 ccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcc 45149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 39699847 - 39699773
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||| | |||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  39699847 ccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagcc 39699773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 43058806 - 43058880
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||||    
T  43058806 ccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcc 43058880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 11437276 - 11437208
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    |||||||||||| ||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  11437276 taactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagattta 11437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 14999305 - 14999361
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  14999305 ccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 45148605 - 45148672
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  45148605 taactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagattta 45148672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 41364849 - 41364923
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||| | |||||||||||||||||    
T  41364849 ccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagcc 41364923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 33088695 - 33088623
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgcc-ccctaagatttagcc 309  Q
    ||||| ||||||| |||||||||||| |||   |||||||||||||||||||||||| |||||||||||||||    
T  33088695 ctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcc 33088623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 45157289 - 45157233
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  45157289 ccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 45157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 51685843 - 51685771
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||||  |||| |||||||||| | | |||||||||||||||||||| |||||||||||||||||    
T  51685843 ctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcc 51685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 39222550 - 39222483
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaat-tttgccccctaagattt 305  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||| || |||| |||||||||    
T  39222550 taactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattt 39222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 44404466 - 44404537
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| || |||||||| |||||| |||||||||||||| |||||| ||||||||| ||||||||    
T  44404466 taactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagcc 44404537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 51684390 - 51684461
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| ||||  ||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||    
T  51684390 taacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcc 51684461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 37526954 - 37526884
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||| ||| || || | |||| ||||||||| ||||||||||||||||    
T  37526954 taactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccctaagatttagcc 37526884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 39698587 - 39698657
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||| |||| ||| |||||||||||||| ||||||| |||||| ||||||| || |||||||||||||    
T  39698587 taacttttaaaaactttcaattttggccccctaagtacagaaactataattttggccactaagatttagcc 39698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 52827368 - 52827442
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt-tgccccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||||| |||||| ||||| |||||||   |||||||||||||||||    
T  52827368 ccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcc 52827442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 35594238 - 35594310
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||| | |||| |||||  ||||||||||||||| ||||||| ||||||||    
T  35594238 ccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaattttgacccctaaaatttagcc 35594310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 11436066 - 11436134
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    |||||||||||| |||||||||||||||    ||||| ||||||||||||||| |||||||||||||||    
T  11436066 taactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagattta 11436134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 23980544 - 23980472
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| |||| |||||||||||||| ||| |||||||||||||| |||||| | | ||||||||||||||    
T  23980544 ctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcc 23980472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 306
Target Start/End: Complemental strand, 39153189 - 39153125
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||||| |||||||||||||||||  | |||||||||||||||||||| ||| ||||||||||    
T  39153189 tttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagattta 39153125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 41366209 - 41366137
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||||| | ||||||||| |||||  |||||  ||||| ||||||| ||||||||||||||||||    
T  41366209 cctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttagccccctaagatttagcc 41366137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 46066545 - 46066617
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||||||||||  |||| ||||| |||||  | |||||||||||||||||||  ||||||||||||||||    
T  46066545 cctaactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagcccctaagatttagcc 46066617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 50680355 - 50680423
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    |||||| ||||| |||||||||||||||||| ||||| |||||||| |||||| | |||||||||||||    
T  50680355 taacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagattta 50680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 52276241 - 52276169
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaacta-caattttgccccctaagatttagcc 309  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||||||  ||||| | ||||||||||||||||    
T  52276241 ctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagcc 52276169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 52828148 - 52828076
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||| |||||||| |||||||||||||| ||| |||||| ||||| ||||||| | |||||||||||||||||    
T  52828148 ctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagcc 52828076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 7675536 - 7675465
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| || || ||||| ||||| || ||||||| |||||||||||||||||    
T  7675536 taactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcc 7675465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 43060084 - 43060013
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    |||||||||||||  ||| ||||||| ||||  |||||||||||||||||||||| |||| |||||||||||    
T  43060084 ctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagc 43060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 43378790 - 43378720
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    |||||||||||| ||| ||||||||  |||| ||||||||||| |||||||||| || |||||||||||||    
T  43378790 taactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagc 43378720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 39151959 - 39152008
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||| |||| ||||||||||||| | ||||||||||||||||||||    
T  39151959 tttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 7674548 - 7674603
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||| |||| ||||||||||||| |||  ||||||||||||||||||||||    
T  7674548 ccctaacttttaaaaacttgcaattttgggccct-aagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 7983073 - 7983141
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||||||| | |||||||||||||||||| | |||  ||||| ||||||||| ||||||||||||||    
T  7983073 taactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagattta 7983141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 35067075 - 35067008
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||  |||| |||||||||||| | | ||||||||||||||||| ||||||||| ||||||||    
T  35067075 tttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcc 35067008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 15000037 - 14999983
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaat 288  Q
    |||||||||||| |||| ||||||||||||  |||| |||||||||| |||||||    
T  15000037 ctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaat 14999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 27054093 - 27054164
Alignment:
Q  129 cctgtcaagcgcagacatgtgtcagagaagggaactcattccc-ctggcatttcaaatggcgggaatgaggaaaac 203  Q
    ||||||| |||||||||||||||||||| |||  ||||||||| |||   ||||||||||||| ||||||||||||    
T  27054093 cctgtcatgcgcagacatgtgtcagagaggggg-ctcattcccgctg---tttcaaatggcggaaatgaggaaaac 27054164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 35595271 - 35595198
Alignment:
Q  238 ctaactttcaaaatctt-gcaattttggccccccaagtacaaaaacta-caattttgccccctaagatttagcc 309  Q
    |||||||| |||| ||| ||||||||| ||||| | ||| |||||||| |||||||| ||||||||||||||||    
T  35595271 ctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccctaagatttagcc 35595198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 44412030 - 44411986
Alignment:
Q  252 cttgcaattttggccccccaagtacaaaaactacaattttgcccc 296  Q
    ||||||||||| | |||| ||||||||||||||||||||| ||||    
T  44412030 cttgcaattttagtcccctaagtacaaaaactacaattttacccc 44411986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 5518 - 5444
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc-taagatttagcc 309  Q
    |||||| |||||||| |||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||||||    
T  5518 ccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcc 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 4463 - 4537
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||| |||||||| ||| ||||||| |||||  ||||||||||| |||||||||  |||||||| ||||||||    
T  4463 ccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcc 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 1829683 - 1829609
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  1829683 ccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcc 1829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 8659288 - 8659360
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  8659288 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 8659360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 8821896 - 8821967
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||    
T  8821896 ctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 27322148 - 27322074
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||||  |||||||||| ||||||    
T  27322148 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcc 27322074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 16704574 - 16704521
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  16704574 taactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 306
Target Start/End: Complemental strand, 26575132 - 26575063
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagattta 306  Q
    ||||||||||||| |||||||||||  ||||  ||||||||||||||||||||| |||||||||||||||    
T  26575132 ctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagattta 26575063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 8822870 - 8822799
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||| ||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  8822870 taactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 8822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 290
Target Start/End: Original strand, 27318335 - 27318389
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattt 290  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  27318335 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 307
Target Start/End: Original strand, 14822388 - 14822453
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttag 307  Q
    |||||||| |||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||||    
T  14822388 tttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 7314903 - 7314974
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||||| |||| |||||  ||||| ||||||||| |||||||||||||||||    
T  7314903 ctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaattttgaccccctaagatttagcc 7314974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 10784617 - 10784688
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||| |||| |||||||||||  ||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  10784617 taacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcc 10784688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 3722589 - 3722527
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgcccc 296  Q
    ||||||||||||||||| |||||||||||| ||| | |||||| ||||| ||||||| |||||    
T  3722589 ctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccc 3722527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 10785993 - 10785919
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||| ||||  ||||||||||  ||||| |||||||||||||||||||||  |||| ||||||||||||    
T  10785993 ccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcc 10785919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 14823644 - 14823583
Alignment:
Q  247 aaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttag 307  Q
    |||| ||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||||||    
T  14823644 aaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 17496818 - 17496890
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg--ccccctaagattta 306  Q
    ||||||||||||||| ||| |||||||  ||| | ||||||||||||| ||||||||  ||||||||||||||    
T  17496818 ccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagattta 17496890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 3721635 - 3721707
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||| |||||||||||| ||||| |||||| ||||| | ||||| | |||| ||||||||||||    
T  3721635 ctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagcc 3721707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 8660282 - 8660211
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    |||||||||||||| ||||||||||| | |||| |||||| ||||| ||||||| | ||||||||||||||||    
T  8660282 cctaactttcaaaaacttgcaatttt-gacccctaagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 34834661 - 34834585
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||||||||||||||| ||||||||||||  | || |||||  ||||| ||||||| | |||||||||||||||||    
T  34834661 ctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagcc 34834585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 7316371 - 7316300
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||| |||||||||||||||||| || ||   |||| |||||||| ||||| ||||||||||||    
T  7316371 taactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcc 7316300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 26574642 - 26574713
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccctaagatttagcc 309  Q
    ||||||||||||| ||||||||||||  || | |||||||||||||||| |||   ||| ||||||||||||    
T  26574642 ctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactacattttgatcccttaagatttagcc 26574713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 27437852 - 27437922
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    ||||||| ||||  ||||||||||||||||| |   | |||||||||||||||| ||||||||||||||||    
T  27437852 taactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagc 27437922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 34830927 - 34830997
Alignment:
Q  240 aactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||||||  |||||  |||||||||| |||||| ||||| ||||||| | |||||||||||||||||    
T  34830927 aactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 34830997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 6842361 - 6842308
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt 291  Q
    |||| ||||||||  ||||||||||||||||| | || ||||||||||||||||    
T  6842361 ctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 17494 - 17552
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccc 297  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  17494 taacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggcccc 17552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 18855 - 18794
Alignment:
Q  237 cctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgccccct 298  Q
    ||||||||| ||||  |||||||||||| |||| | |||||||||||| ||||||| |||||    
T  18855 cctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggcccct 18794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 19516 - 19580
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagattta 306  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||    
T  19516 tttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagattta 19580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 61532 - 61465
Alignment:
Q  243 tttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||| ||||||||||| |||||| |||||||||||||| |||||| |||||||| |||||||||    
T  61532 tttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagcc 61465  T

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Target: scaffold0019; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 60113 - 60185
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||| |||| |||||||||||| ||||| | ||| |||||||||||||||| ||||||| |||||||||    
T  60113 ctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcc 60185  T

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Target: scaffold0059 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 3696 - 3770
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||||| ||||||||||||||||||  |||| | |||||| |||||| | ||||||||||||||||    
T  3696 ccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagcc 3770  T

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Target: scaffold0059; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 4812 - 4754
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg 292  Q
    |||||||||||| |||| | |||||||||||||||| || |||| ||||||||||||||    
T  4812 ctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttg 4754  T

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Target: scaffold1303 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 1462 - 1534
Alignment:
Q  238 ctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||||| |||| |||||||||||| ||||| | ||| |||||||| ||||||| |||||||||||||||||    
T  1462 ctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcc 1534  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 23100 - 23174
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgc-cccctaagatttagcc 309  Q
    ||||||||||||||| |||||||||||| ||| | |||||| ||||| ||||| |||| |||||||| |||||||    
T  23100 ccctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagcc 23174  T

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Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 23972 - 23907
Alignment:
Q  234 ctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttgcccccta 299  Q
    ||||||||||||||||| |||||||||||||| ||| || ||  ||||| |||| ||| |||||||    
T  23972 ctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaacttttcccccta 23907  T

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Target: scaffold0093 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 2546 - 2472
Alignment:
Q  236 ccctaactttcaaaat-cttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||||||||  |||||||||||| ||||| |||||||||||| || ||||| |||||||| ||||||||    
T  2546 ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

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Target: scaffold0093; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 7169 - 7095
Alignment:
Q  236 ccctaactttcaaaat-cttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagc 308  Q
    |||||||||||||||  |||||||||||| ||||| |||||||||||| || ||||| |||||||| ||||||||    
T  7169 ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 37185 - 37242
Alignment:
Q  253 ttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||||||| |||||||||    
T  37185 ttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagcc 37242  T

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Target: scaffold0586 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 6386 - 6438
Alignment:
Q  258 attttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    ||||| |||||| | |||||||||||||||||||| |||||||||||||||||    
T  6386 attttagccccctatgtacaaaaactacaattttgaccccctaagatttagcc 6438  T

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Target: scaffold0586; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 9069 - 9033
Alignment:
Q  273 gtacaaaaactacaattttgccccctaagatttagcc 309  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9069 gtacaaaaactacaattttggcccctaagatttagcc 9033  T

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Target: scaffold2034 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 257 - 328
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    ||||||||||||  |||||||||||| |||| | |||||||||||| |||||| | ||||||||| ||||||    
T  257 taactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcc 328  T

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Target: scaffold0632 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 3388 - 3314
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||| |||||||||| ||| |||||||| ||||  | |||||||||||| |||||| | ||||||||||||||||    
T  3388 cccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcc 3314  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 199 - 125
Alignment:
Q  236 ccctaactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt-gccccctaagatttagcc 309  Q
    |||||||||||||||  |||| |||||||||||||| |||  ||||| |||||||| |||||||| | |||||||    
T  199 ccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccccctatgttttagcc 125  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 49510 - 49440
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaattttg-ccccctaagatttagc 308  Q
    ||||||| ||||  ||||||||||||||||| |   | |||||||||||||||| ||||||||||||||||    
T  49510 taactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagc 49440  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 309
Target Start/End: Complemental strand, 7473 - 7421
Alignment:
Q  258 attttggccccccaagtacaaaaactacaattttg-ccccctaagatttagcc 309  Q
    |||||| ||||| | ||||| |||||||||||||| |||||||||||||||||    
T  7473 attttgaccccctatgtacagaaactacaattttgaccccctaagatttagcc 7421  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 49161 - 49109
Alignment:
Q  239 taactttcaaaatcttgcaattttggccccccaagtacaaaaactacaatttt 291  Q
    ||||||| |||| ||||||||||||||| || |||||  ||||||||||||||    
T  49161 taacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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