View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16635_low_12 (Length: 326)
Name: NF16635_low_12
Description: NF16635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16635_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 33835704 - 33836003
Alignment:
| Q |
18 |
atgtggttacatccaatcacttttgtcttcttaaactattatggtgtctagtgttgtgtatggtgtatgtatttgtgtctgtgtcagtgcttcataatca |
117 |
Q |
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| T |
33835704 |
atgtggttacatccaatcacttttgtcttcttaaactattatggtgtctagtgtcgtgtatggtgtatgtatttgtgtctgtgtcagtgcttcataatca |
33835803 |
T |
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| Q |
118 |
atgagtacctgacacatgcagctgaagcccacccaaaagctaagactaagcaaatgatacatccctgcacattgaacataaaattcagattatggggaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33835804 |
atgagtacctgacacatgcagctgaagcccacccaaaagctaagactaagcaaatgatacatccctgcacattgaacataaaattcagattatggggaca |
33835903 |
T |
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| Q |
218 |
aacacattaagttttgagcaactacacaaatggaattagacatcgcatcgtaacctaatatgttaatacattagatatataaatcctttcactgtatatt |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33835904 |
aacacattaagttttgagcaactacacaaatggaattagacatcgcatcgtaacctaatatgttaatacattagatatataaatcatttcactgtatatt |
33836003 |
T |
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