View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16635_low_22 (Length: 249)

Name: NF16635_low_22
Description: NF16635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16635_low_22
NF16635_low_22
[»] chr5 (18 HSPs)
chr5 (25-233)||(378914-379115)
chr5 (7-58)||(40411459-40411510)
chr5 (7-52)||(11632686-11632731)
chr5 (7-54)||(10553437-10553484)
chr5 (7-53)||(10553777-10553823)
chr5 (7-53)||(13717144-13717190)
chr5 (7-52)||(4239580-4239625)
chr5 (7-48)||(13949805-13949846)
chr5 (7-52)||(13999214-13999259)
chr5 (7-44)||(18676939-18676976)
chr5 (7-48)||(26629516-26629557)
chr5 (7-52)||(40012817-40012862)
chr5 (17-57)||(6827947-6827987)
chr5 (7-50)||(5950463-5950506)
chr5 (13-52)||(13926988-13927027)
chr5 (7-52)||(4549364-4549409)
chr5 (16-53)||(17519567-17519604)
chr5 (7-52)||(39853401-39853446)
[»] chr7 (31 HSPs)
chr7 (7-52)||(30111834-30111879)
chr7 (7-52)||(152902-152947)
chr7 (7-52)||(510697-510742)
chr7 (7-52)||(28343359-28343404)
chr7 (7-51)||(12741423-12741467)
chr7 (17-52)||(39300426-39300461)
chr7 (7-57)||(21068407-21068457)
chr7 (7-49)||(27417651-27417693)
chr7 (7-57)||(29894006-29894056)
chr7 (3-52)||(3023969-3024018)
chr7 (7-52)||(12252386-12252431)
chr7 (7-52)||(23102340-23102385)
chr7 (7-52)||(33475578-33475623)
chr7 (7-52)||(39785147-39785192)
chr7 (7-52)||(47912524-47912569)
chr7 (13-49)||(32884814-32884850)
chr7 (7-55)||(37328876-37328924)
chr7 (7-50)||(29613906-29613949)
chr7 (7-57)||(12893103-12893153)
chr7 (7-53)||(18839343-18839389)
chr7 (17-51)||(32631578-32631612)
chr7 (7-49)||(37971509-37971551)
chr7 (7-52)||(30823636-30823681)
chr7 (7-52)||(39029102-39029147)
chr7 (7-52)||(40459833-40459878)
chr7 (7-52)||(43056688-43056733)
chr7 (7-52)||(48136362-48136407)
chr7 (8-52)||(9881401-9881445)
chr7 (24-52)||(46197105-46197133)
chr7 (7-51)||(46405302-46405346)
chr7 (17-45)||(47032371-47032399)
[»] chr3 (36 HSPs)
chr3 (7-52)||(36054010-36054055)
chr3 (7-58)||(24149831-24149882)
chr3 (7-52)||(26004848-26004893)
chr3 (7-52)||(26556908-26556953)
chr3 (7-52)||(30589886-30589931)
chr3 (7-52)||(38628820-38628865)
chr3 (7-52)||(50902418-50902463)
chr3 (8-52)||(26292564-26292608)
chr3 (17-53)||(27593998-27594034)
chr3 (7-58)||(11432596-11432647)
chr3 (7-57)||(33417106-33417157)
chr3 (16-50)||(43152080-43152114)
chr3 (7-52)||(2124705-2124750)
chr3 (7-52)||(10728125-10728170)
chr3 (7-52)||(17947269-17947314)
chr3 (7-52)||(27239327-27239372)
chr3 (7-52)||(31645364-31645409)
chr3 (7-52)||(36673260-36673305)
chr3 (7-51)||(6783189-6783233)
chr3 (11-51)||(19551153-19551193)
chr3 (17-57)||(28845681-28845721)
chr3 (8-48)||(44904961-44905001)
chr3 (7-50)||(20833947-20833990)
chr3 (11-54)||(23754592-23754635)
chr3 (7-50)||(46223308-46223351)
chr3 (7-54)||(50761220-50761267)
chr3 (7-48)||(10661237-10661278)
chr3 (7-52)||(18750684-18750729)
chr3 (7-52)||(23360618-23360663)
chr3 (7-52)||(23367458-23367503)
chr3 (13-50)||(37455891-37455928)
chr3 (7-52)||(45254555-45254600)
chr3 (7-52)||(52617087-52617132)
chr3 (7-52)||(54629902-54629947)
chr3 (7-51)||(48380199-48380243)
chr3 (22-58)||(52811408-52811444)
[»] chr8 (30 HSPs)
chr8 (17-56)||(30381818-30381857)
chr8 (7-57)||(4656117-4656167)
chr8 (7-52)||(7149075-7149120)
chr8 (7-52)||(9458548-9458593)
chr8 (7-52)||(40264275-40264320)
chr8 (7-58)||(18957828-18957879)
chr8 (7-58)||(34893407-34893458)
chr8 (17-52)||(37566521-37566556)
chr8 (9-52)||(41385870-41385913)
chr8 (10-53)||(42366941-42366984)
chr8 (7-57)||(32498940-32498990)
chr8 (7-53)||(37857926-37857972)
chr8 (7-48)||(10795379-10795420)
chr8 (7-52)||(14781248-14781293)
chr8 (7-52)||(39466634-39466679)
chr8 (8-48)||(17791611-17791651)
chr8 (7-47)||(38805929-38805969)
chr8 (7-51)||(44724898-44724942)
chr8 (16-51)||(4302112-4302147)
chr8 (7-50)||(9287608-9287651)
chr8 (7-53)||(4030442-4030488)
chr8 (22-56)||(8502636-8502670)
chr8 (7-45)||(43604382-43604420)
chr8 (7-48)||(1605804-1605845)
chr8 (17-58)||(10128314-10128355)
chr8 (7-52)||(18305077-18305122)
chr8 (7-48)||(19716983-19717024)
chr8 (7-48)||(42304745-42304786)
chr8 (13-49)||(40012297-40012333)
chr8 (13-45)||(43307661-43307693)
[»] chr2 (20 HSPs)
chr2 (7-58)||(24192657-24192708)
chr2 (7-56)||(28845627-28845676)
chr2 (7-52)||(29941930-29941975)
chr2 (7-52)||(45547956-45548001)
chr2 (9-55)||(6288553-6288599)
chr2 (17-51)||(24935292-24935326)
chr2 (17-51)||(25683985-25684019)
chr2 (7-52)||(214625-214670)
chr2 (7-52)||(379959-380004)
chr2 (7-52)||(7486957-7487002)
chr2 (8-57)||(10658480-10658529)
chr2 (7-52)||(18178321-18178366)
chr2 (7-52)||(25289204-25289249)
chr2 (7-52)||(26789834-26789879)
chr2 (7-52)||(35171381-35171426)
chr2 (17-52)||(11535725-11535760)
chr2 (13-52)||(30239161-30239200)
chr2 (17-51)||(12135585-12135619)
chr2 (7-49)||(36599148-36599190)
chr2 (7-52)||(33136646-33136691)
[»] scaffold0237 (1 HSPs)
scaffold0237 (7-52)||(20447-20492)
[»] scaffold0153 (1 HSPs)
scaffold0153 (7-52)||(33825-33870)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-52)||(80793-80838)
[»] chr6 (12 HSPs)
chr6 (7-52)||(3109350-3109395)
chr6 (7-52)||(29864752-29864797)
chr6 (17-52)||(10008375-10008410)
chr6 (17-51)||(35165691-35165725)
chr6 (7-52)||(6475743-6475788)
chr6 (7-52)||(7498149-7498194)
chr6 (7-52)||(30384172-30384217)
chr6 (7-52)||(31068469-31068514)
chr6 (7-52)||(31896686-31896731)
chr6 (7-52)||(4199587-4199632)
chr6 (22-51)||(5958074-5958103)
chr6 (7-51)||(14261552-14261596)
[»] chr4 (27 HSPs)
chr4 (7-52)||(42315923-42315968)
chr4 (7-52)||(47686862-47686907)
chr4 (17-57)||(388612-388652)
chr4 (7-47)||(3434832-3434872)
chr4 (7-55)||(44930650-44930698)
chr4 (5-52)||(7820988-7821035)
chr4 (7-58)||(23988246-23988297)
chr4 (17-52)||(28846170-28846205)
chr4 (17-52)||(54510611-54510646)
chr4 (7-53)||(42217447-42217493)
chr4 (7-52)||(5442440-5442485)
chr4 (7-52)||(7809039-7809084)
chr4 (7-52)||(27769113-27769158)
chr4 (7-52)||(32683135-32683180)
chr4 (7-52)||(48262124-48262169)
chr4 (17-49)||(5117868-5117900)
chr4 (7-51)||(32323119-32323163)
chr4 (7-45)||(8583008-8583046)
chr4 (8-50)||(41726156-41726198)
chr4 (7-48)||(5801762-5801803)
chr4 (7-52)||(37916857-37916902)
chr4 (7-52)||(50019240-50019285)
chr4 (7-52)||(54342196-54342241)
chr4 (7-51)||(29649131-29649175)
chr4 (24-52)||(44929876-44929904)
chr4 (7-51)||(49833973-49834017)
chr4 (9-53)||(56399082-56399126)
[»] chr1 (24 HSPs)
chr1 (7-48)||(26881820-26881861)
chr1 (7-52)||(45319516-45319561)
chr1 (17-52)||(10897693-10897728)
chr1 (9-52)||(14389465-14389508)
chr1 (17-52)||(36403135-36403170)
chr1 (7-54)||(48176644-48176691)
chr1 (7-49)||(45535798-45535840)
chr1 (7-57)||(52706429-52706479)
chr1 (7-52)||(6313625-6313670)
chr1 (7-52)||(9321619-9321664)
chr1 (7-52)||(25613141-25613186)
chr1 (7-52)||(28386558-28386603)
chr1 (7-52)||(29395538-29395583)
chr1 (17-52)||(33242461-33242496)
chr1 (13-52)||(46329023-46329062)
chr1 (18-52)||(9832768-9832802)
chr1 (7-53)||(49232033-49232079)
chr1 (7-56)||(1087507-1087556)
chr1 (8-49)||(8139980-8140021)
chr1 (15-48)||(9174936-9174969)
chr1 (7-52)||(20111682-20111727)
chr1 (7-52)||(25830360-25830405)
chr1 (7-52)||(51702643-51702688)
chr1 (16-52)||(15835374-15835410)
[»] scaffold0940 (1 HSPs)
scaffold0940 (7-52)||(3574-3619)
[»] scaffold0839 (1 HSPs)
scaffold0839 (7-51)||(3114-3158)
[»] scaffold0054 (1 HSPs)
scaffold0054 (7-51)||(36401-36445)
[»] scaffold0095 (1 HSPs)
scaffold0095 (7-50)||(21822-21865)
[»] scaffold0042 (1 HSPs)
scaffold0042 (7-52)||(57170-57215)
[»] scaffold1521 (1 HSPs)
scaffold1521 (7-59)||(1285-1337)
[»] scaffold0492 (1 HSPs)
scaffold0492 (16-52)||(12094-12130)
[»] scaffold0383 (1 HSPs)
scaffold0383 (7-59)||(16140-16192)
[»] scaffold0152 (1 HSPs)
scaffold0152 (7-59)||(29382-29434)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 378914 - 379115
Alignment:
Q  25 cttttaaaatctcaatccaatacaccccttaaatacttcataaccccaaattgctttggtcnnnnnnnnnnnnnncaccaattgctagcaaagatcaatt 124  Q
    ||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||||||||               |||||||||||||||||||||||||    
T  378914 cttttaaaatcccaatccaatataccc--taagtacttcataaccccaaattgctttggt-----aaaaaaaaaacaccaattgctagcaaagatcaatt 379006  T
Q  125 aacaatatttctttgtagaaaaagaaacaactgtgatgaattgacccacttgatatagacctttgaacaccaattatatgagggagtataacatgttcca 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  379007 aacaatatttctttgtagaaaaagaaacaactgtgatgaattgacccacttgatatagacctttgaacaccaattatatgagggagtataacatgttcca 379106  T
Q  225 agtgcctgt 233  Q
    | |||||||    
T  379107 attgcctgt 379115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 40411459 - 40411510
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  40411459 tttttctatcaaaacagtcttttaaaatctcaatccaatacaccccctaaat 40411510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 11632731 - 11632686
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  11632731 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 11632686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 10553484 - 10553437
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccctt 54  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  10553484 tttttctatcaaaacagtctttttaaatctcaatccaatacacccctt 10553437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 10553777 - 10553823
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  10553777 tttttctatcaaaacagtcttttaaaatctcaatccaatacatccct 10553823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 13717144 - 13717190
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13717144 tttttttattaaaatagtcttttaaaatcctaatccaatacacccct 13717190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 4239625 - 4239580
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  4239625 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 4239580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 13949846 - 13949805
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  13949846 tttttctatcaaaacagtcttttaaaatctcaatccaataca 13949805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 13999259 - 13999214
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  13999259 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 13999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 18676976 - 18676939
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaa 44  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  18676976 tttttctatcaaaatagtcttttaaaatctcaatccaa 18676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 26629557 - 26629516
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  26629557 tttttcaatcaaaatagtcttttaaaatctcaatccaataca 26629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 40012862 - 40012817
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  40012862 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 40012817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 6827987 - 6827947
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  6827987 aaaataatcttttaaaatctcaatccaatacaccccctaaa 6827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 5950463 - 5950506
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  5950463 tttttttattaaaatagtcttttaaaatcataatccaatacacc 5950506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 13926988 - 13927027
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  13926988 tattaaaatagtcttttaaaatcctaatccaatacacccc 13927027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 4549409 - 4549364
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||| ||||||||||    
T  4549409 tttttttattaaaatagtcttttaaaatcctaatcgaatacacccc 4549364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 17519567 - 17519604
Alignment:
Q  16 taaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  17519567 taaaatagtcttttaaaatcttaatccaatacatccct 17519604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 39853401 - 39853446
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||    
T  39853401 tttttatattaaaatagtcttttaaaattctaatccaatacacccc 39853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 30111834 - 30111879
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  30111834 tttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 30111879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 152902 - 152947
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  152902 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 152947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 510697 - 510742
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  510697 tttttttattaaaatagtcttttaaaatcccaatccaatacacccc 510742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 28343359 - 28343404
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  28343359 tttttttattaaaatagtcttttaaaatcccaatccaatacacccc 28343404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 12741423 - 12741467
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  12741423 tttttttattaaaatagtcttttaaaatcttaatccaatacaccc 12741467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 39300461 - 39300426
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  39300461 aaaatagtcttttaaaatctcaatccaatacacccc 39300426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 21068407 - 21068457
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  21068407 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaa 21068457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 27417693 - 27417651
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  27417693 tttttctatcaaaatactcttttaaaatctcaatccaatacac 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 29894006 - 29894056
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  29894006 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccataaa 29894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 3023969 - 3024018
Alignment:
Q  3 aaaatttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||| |||| |||||||||||||||||||||||  |||||||||||||||    
T  3023969 aaaacttttttattaaaatagtcttttaaaatcctaatccaatacacccc 3024018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 12252431 - 12252386
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||    
T  12252431 tttttctatcaaaacaatcttttaaaatctcaatccaatacacccc 12252386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 23102340 - 23102385
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  23102340 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 23102385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 33475578 - 33475623
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||    
T  33475578 tttttctatcaaaacagtcttttaaaatctcaatcaaatacacccc 33475623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 39785147 - 39785192
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  39785147 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 39785192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 47912569 - 47912524
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  47912569 tttttctatcaaaacagtcttttaaaatctcaatccaatatacccc 47912524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 32884814 - 32884850
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32884814 tattaaaatagtcttttaaaatcttaatccaatacac 32884850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 37328876 - 37328924
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccctta 55  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  37328876 tttttttattaaaatagtcttttaaaattctaatccaatacacccctta 37328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 29613949 - 29613906
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  29613949 tttttttattaaaatagtcttttaaaatcctaatccaatacacc 29613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 12893153 - 12893103
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||| |||| ||||||| ||||||||||  ||||||||||||||||||||    
T  12893153 tttttttattgaaatagtattttaaaatcctaatccaatacaccccttaaa 12893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 18839343 - 18839389
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||    
T  18839343 tttttttattaaaataatcttttaaaatcctaatccaatacacccct 18839389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 32631578 - 32631612
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    |||||||||||| ||||||||||||||||||||||    
T  32631578 aaaatagtctttcaaaatctcaatccaatacaccc 32631612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 37971551 - 37971509
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    ||||| |||||||||||||||||||||||  ||||||||||||    
T  37971551 tttttttattaaaatagtcttttaaaatcctaatccaatacac 37971509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 30823636 - 30823681
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  ||| |||||||||||    
T  30823636 tttttttattaaaatagtcttttaaaatcctaattcaatacacccc 30823681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 39029102 - 39029147
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||| ||||||||||||  |||||||||||||||    
T  39029102 tttttttattaaaataatcttttaaaatcctaatccaatacacccc 39029147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 40459878 - 40459833
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||    
T  40459878 tttttttattaaaatagtcttttaaaattctaatccaatacacccc 40459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 43056733 - 43056688
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| | ||||||||||||||||| |||||||||||    
T  43056733 tttttctatcaaaacattcttttaaaatctcaattcaatacacccc 43056688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 48136407 - 48136362
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  ||||||||| |||||    
T  48136407 tttttttattaaaatagtcttttaaaatcctaatccaatatacccc 48136362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 9881445 - 9881401
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||| ||||||||| |||||||||||||  |||||||||||||||    
T  9881445 ttttttattaaaattgtcttttaaaatcctaatccaatacacccc 9881401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 46197133 - 46197105
Alignment:
Q  24 tcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||||||||    
T  46197133 tcttttaaaatctcaatccaatacacccc 46197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 46405346 - 46405302
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  |||| |||||||||    
T  46405346 tttttttattaaaatagtcttttaaaatcctaatctaatacaccc 46405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 47032371 - 47032399
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaat 45  Q
    |||||||||||||||||||||||||||||    
T  47032371 aaaatagtcttttaaaatctcaatccaat 47032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 36054055 - 36054010
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  36054055 tttttctatcaaaatagtcttttaaaatctcaatccaatacacccc 36054010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 24149882 - 24149831
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  24149882 tttttctatcaaaatagtcttttaaaatcttaatccaatacaccccctaaat 24149831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 26004893 - 26004848
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  26004893 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26004848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 26556908 - 26556953
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  26556908 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26556953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 30589886 - 30589931
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  30589886 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 30589931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 38628865 - 38628820
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  38628865 tttttctatcaaaagagtcttttaaaatctcaatccaatacacccc 38628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 50902463 - 50902418
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  50902463 tttttttattaaaatagtcttttaaaatcttaatccaatacacccc 50902418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 26292608 - 26292564
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  26292608 ttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 26292564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 27593998 - 27594034
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    |||||||||||||||||||||||||||||||||||||    
T  27593998 aaaatagtcttttaaaatctcaatccaatacacccct 27594034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 11432596 - 11432647
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| |||||    
T  11432596 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaat 11432647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 33417106 - 33417157
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacac-cccttaaa 57  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  33417106 tttttcaatcaaaatagtcttttaaaatctcaatccaatacactcccttaaa 33417157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 43152080 - 43152114
Alignment:
Q  16 taaaatagtcttttaaaatctcaatccaatacacc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  43152080 taaaatagtcttttaaaatctcaatccaatacacc 43152114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 2124750 - 2124705
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||    
T  2124750 tttttttatcaaaacagtcttttaaaatctcaatccaatacacccc 2124705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 10728170 - 10728125
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  10728170 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 10728125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 17947269 - 17947314
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  17947269 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 17947314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 27239372 - 27239327
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  27239372 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 27239327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 31645409 - 31645364
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||    
T  31645409 tttttttattaaaattgtcttttaaaatcttaatccaatacacccc 31645364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 36673305 - 36673260
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  36673305 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 36673260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 6783233 - 6783189
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  6783233 tttttttatcaaaatagtcttttaaaatttcaatccaatacaccc 6783189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 19551193 - 19551153
Alignment:
Q  11 tctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  19551193 tctatcaaaacagtcttttaaaatctcaatccaatacaccc 19551153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 28845681 - 28845721
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  28845681 aaaatagtcttttaaaacctcaatccaatacaccccctaaa 28845721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 44905001 - 44904961
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  44905001 ttttttattaaaatagtcttttaaaatcttaatccaataca 44904961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 20833947 - 20833990
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  20833947 tttttttattaaaatagtcttttaaaatcctaatccaatacacc 20833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 23754592 - 23754635
Alignment:
Q  11 tctattaaaatagtcttttaaaatctcaatccaatacacccctt 54  Q
    ||||| || ||| |||||||||||||||||||||||||||||||    
T  23754592 tctatcaacataatcttttaaaatctcaatccaatacacccctt 23754635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 46223351 - 46223308
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||    
T  46223351 tttttctatcaaaacagtcttttaaaatctcaattcaatacacc 46223308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 50761267 - 50761220
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccctt 54  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||||    
T  50761267 tttttttattaaaatagtcttttaatatcctaatccaatacacccctt 50761220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 10661237 - 10661278
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  10661237 tttttttattaaaatagtcttttaaaatcctaatccaataca 10661278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 18750684 - 18750729
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  ||| |||||||||||    
T  18750684 tttttttattaaaatagtcttttaaaatcctaattcaatacacccc 18750729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 23360618 - 23360663
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||    
T  23360618 tttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23360663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 23367458 - 23367503
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||||    
T  23367458 tttttatatcaaaacagtcttttagaatctcaatccaatacacccc 23367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 37455891 - 37455928
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    |||||||||||||||||||||||  |||||||||||||    
T  37455891 tattaaaatagtcttttaaaatcctaatccaatacacc 37455928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 45254600 - 45254555
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||| ||||||||||    
T  45254600 tttttttattaaaatagtcttttaaaatcctaatctaatacacccc 45254555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 52617132 - 52617087
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||| |||||||||||||  |||||||||||||||    
T  52617132 tttttttattaaaattgtcttttaaaatcctaatccaatacacccc 52617087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 54629902 - 54629947
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||| |||||||||||||  |||||||||||||||    
T  54629902 tttttttattaaaattgtcttttaaaatcctaatccaatacacccc 54629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 48380199 - 48380243
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||    
T  48380199 tttttttattaaaatagtcttttaaaattctaatccaatacaccc 48380243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 52811408 - 52811444
Alignment:
Q  22 agtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  52811408 agtcttttaaaatcttaattcaatacaccccttaaat 52811444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 30381857 - 30381818
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccccttaa 56  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30381857 aaaatagtcttttaaaatctcaatccaatacaccccttaa 30381818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 4656117 - 4656167
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  4656117 tttttctatcaaaacagtcttttaaaatctcaatccaatacaccccctaaa 4656167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 7149075 - 7149120
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  7149075 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 7149120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 9458548 - 9458593
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  9458548 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 9458593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 40264320 - 40264275
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  40264320 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 40264275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 18957879 - 18957828
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| |||||    
T  18957879 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaat 18957828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 34893407 - 34893458
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| |||||    
T  34893407 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaat 34893458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 37566556 - 37566521
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  37566556 aaaatagtcttttaaaatctcaatccaatacacccc 37566521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 41385913 - 41385870
Alignment:
Q  9 tttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  41385913 tttctatcaaaacagtcttttaaaatctcaatccaatacacccc 41385870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 42366941 - 42366984
Alignment:
Q  10 ttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  42366941 ttctatcaaaatagtcatttaaaatctcaatccaatacacccct 42366984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 32498940 - 32498990
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  32498940 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaa 32498990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 37857926 - 37857972
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  37857926 tttttttattaaaatagtcttttaaaatcctaatccaatacacccct 37857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 10795420 - 10795379
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  10795420 tttttctatcaaaacagtcttttaaaatctcaatccaataca 10795379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 14781293 - 14781248
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  14781293 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 14781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 39466679 - 39466634
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||||    
T  39466679 tttttttattaaaataatcttttaaaatcttaatccaatacacccc 39466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 17791611 - 17791651
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  17791611 ttttcaatcaaaatagtcttttaaaatctcaatccaataca 17791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 38805969 - 38805929
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatac 47  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  38805969 tttttctaccaaaatagtcttttaaaatctcaatccaatac 38805929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 44724942 - 44724898
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  44724942 tttttttattaaaatagtcttttaaaatcctaatccaatacaccc 44724898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 4302147 - 4302112
Alignment:
Q  16 taaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4302147 taaaatagtcttttaaattctcaatccaatacaccc 4302112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 9287651 - 9287608
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  9287651 tttttttattaaaatagtcttttaaaatcctaatccaatacacc 9287608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 4030488 - 4030442
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||| |||||||||||||||||||||||  |||| |||||||||||    
T  4030488 tttttttattaaaatagtcttttaaaatcctaatctaatacacccct 4030442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 8502670 - 8502636
Alignment:
Q  22 agtcttttaaaatctcaatccaatacaccccttaa 56  Q
    ||||||||||||||||||||||||||| |||||||    
T  8502670 agtcttttaaaatctcaatccaatacatcccttaa 8502636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 43604420 - 43604382
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaat 45  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  43604420 tttttctatcaaaacagtcttttaaaatctcaatccaat 43604382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 1605845 - 1605804
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||||||| |||| ||| |||||||||||||||||||||||    
T  1605845 tttttctatcaaaacagtattttaaaatctcaatccaataca 1605804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 10128314 - 10128355
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    |||||| ||||||||| ||||||||||||||||||| |||||    
T  10128314 aaaataatcttttaaattctcaatccaatacaccccctaaat 10128355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 18305122 - 18305077
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||| |||||||||||||  |||||||||||||||    
T  18305122 tttttttattaaaattgtcttttaaaatcctaatccaatacacccc 18305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 19717024 - 19716983
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  19717024 tttttttattaaaatagtcttttaaaatcctaatccaataca 19716983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 42304786 - 42304745
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  42304786 tttttttattaaaatagtcttttaaaatcctaatccaataca 42304745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 40012333 - 40012297
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  40012333 tattaaaatagtattttaaaatcttaatccaatacac 40012297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 43307693 - 43307661
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaat 45  Q
    |||||||||||||||||||||||| ||||||||    
T  43307693 tattaaaatagtcttttaaaatcttaatccaat 43307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 24192708 - 24192657
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  24192708 tttttttatcaaaatagtcttttaaaatctcaatccaatacaccccctaaat 24192657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 28845627 - 28845676
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaa 56  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  28845627 tttttttattaaaatagtcttttaaaatcctaatccaatacaccccttaa 28845676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 29941930 - 29941975
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  29941930 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 29941975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 45547956 - 45548001
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  45547956 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 45548001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 6288599 - 6288553
Alignment:
Q  9 tttctattaaaatagtcttttaaaatctcaatccaatacacccctta 55  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||||    
T  6288599 tttctatcaaaacagtcttttaaaatctcaatccaatccacccctta 6288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 24935326 - 24935292
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    |||||||||||||||||||||||||||||||||||    
T  24935326 aaaatagtcttttaaaatctcaatccaatacaccc 24935292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 25684019 - 25683985
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    |||||||||||||||||||||||||||||||||||    
T  25684019 aaaatagtcttttaaaatctcaatccaatacaccc 25683985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 214670 - 214625
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  214670 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 214625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 379959 - 380004
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  379959 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 7487002 - 7486957
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  7487002 tttttctatcaaaacggtcttttaaaatctcaatccaatacacccc 7486957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 10658480 - 10658529
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    |||| |||||||||||||||||||||||  ||||||||||||||| ||||    
T  10658480 ttttttattaaaatagtcttttaaaatcctaatccaatacaccccctaaa 10658529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 18178321 - 18178366
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  18178321 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 18178366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25289204 - 25289249
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  25289204 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 25289249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 26789834 - 26789879
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  26789834 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 26789879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 35171426 - 35171381
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||    
T  35171426 tttttctatcaaaacagtcttttaaaatctcaatccaacacacccc 35171381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 11535725 - 11535760
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||| |||||||||||    
T  11535725 aaaatagtcttttaaaatctcaattcaatacacccc 11535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 30239200 - 30239161
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  30239200 tattaaaatagtcttttaaaatcataatccaatacacccc 30239161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 12135585 - 12135619
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    |||||||||||| ||||||||||||||||||||||    
T  12135585 aaaatagtctttcaaaatctcaatccaatacaccc 12135619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 36599190 - 36599148
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||    
T  36599190 tttttctattaaaatagtcctttaaaatttcattccaatacac 36599148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 33136646 - 33136691
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||| |||||||||||||  |||||||||||||||    
T  33136646 tttttttattaaaattgtcttttaaaatcctaatccaatacacccc 33136691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 20492 - 20447
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  20492 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 20447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 33870 - 33825
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  33870 tttttctatcaaaaaagtcttttaaaatctcaatccaatacacccc 33825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 80838 - 80793
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  80838 tttttctatcaaaaaagtcttttaaaatctcaatccaatacacccc 80793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 3109395 - 3109350
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  3109395 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 3109350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 29864797 - 29864752
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  29864797 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 29864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 10008410 - 10008375
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  10008410 aaaatagtcttttaaaatctcaatccaatacacccc 10008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 35165691 - 35165725
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    |||||||||||||||||||||||||||||||||||    
T  35165691 aaaatagtcttttaaaatctcaatccaatacaccc 35165725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 6475788 - 6475743
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||||    
T  6475788 tttttctatcaaaacagtcttttaaaatctcaattcaatacacccc 6475743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 7498149 - 7498194
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  7498149 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 7498194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 30384217 - 30384172
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  30384217 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 30384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 31068469 - 31068514
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  31068469 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 31068514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 31896686 - 31896731
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  31896686 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 31896731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 4199632 - 4199587
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||| ||||||||||  |||||||||||||||    
T  4199632 tttttttattaaaatagtgttttaaaatcctaatccaatacacccc 4199587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 5958074 - 5958103
Alignment:
Q  22 agtcttttaaaatctcaatccaatacaccc 51  Q
    ||||||||||||||||||||||||||||||    
T  5958074 agtcttttaaaatctcaatccaatacaccc 5958103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 14261596 - 14261552
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| ||||||||| |||||||||||||  ||||||||||||||    
T  14261596 tttttttattaaaattgtcttttaaaatcataatccaatacaccc 14261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 42315923 - 42315968
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  42315923 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 42315968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 47686862 - 47686907
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47686862 tttttttatcaaaatagtcttttaaaatctcaatccaatacacccc 47686907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 388652 - 388612
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  388652 aaaatagtcttttaaaatctcaatccaatacaccccctaaa 388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 3434872 - 3434832
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatac 47  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  3434872 tttttctattaaaatagtcttttaaaatctcaattcaatac 3434832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 44930650 - 44930698
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccctta 55  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  44930650 tttttttatcaaaacagtcttttaaaatctcaatccaatacacccctta 44930698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 7820988 - 7821035
Alignment:
Q  5 aatttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  7820988 aatttttctatcaaatcagtcttttaaaatctcaatccaatacacccc 7821035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 23988246 - 23988297
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaat 58  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| ||||    
T  23988246 tttttttattaaaatagtcttttaaaatcctaatccaatacacccctaaaat 23988297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 28846205 - 28846170
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  28846205 aaaatagtcttttaaaatctcaatccaatacacccc 28846170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 54510611 - 54510646
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  54510611 aaaatagtcttttaaaatctcaatccaatacacccc 54510646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 42217493 - 42217447
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||    
T  42217493 tttttctatcaaaacagtcttttaaaatctcaatcaaatacacccct 42217447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 5442440 - 5442485
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  5442440 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 5442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 7809039 - 7809084
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||    
T  7809039 tttttctatcaaaccagtcttttaaaatctcaatccaatacacccc 7809084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 27769113 - 27769158
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  27769113 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 27769158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 32683180 - 32683135
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  32683180 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 32683135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 48262124 - 48262169
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  48262124 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 48262169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 5117868 - 5117900
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacac 49  Q
    |||||||||||||||||||||||||||||||||    
T  5117868 aaaatagtcttttaaaatctcaatccaatacac 5117900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32323119 - 32323163
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  32323119 tttttttattaaaatagtcttttaaaatcctaatccaatacaccc 32323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 8583046 - 8583008
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaat 45  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  8583046 tttttctatcaaaacagtcttttaaaatctcaatccaat 8583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 41726156 - 41726198
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  41726156 ttttttattaaaatagtcttttaaaatcataatccaatacacc 41726198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 5801762 - 5801803
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||| |||||||||||| ||||||||||| |||||||||||    
T  5801762 tttttttattaaaatagttttttaaaatcttaatccaataca 5801803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 37916857 - 37916902
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||| ||||||||  |||||||||||||||    
T  37916857 tttttttattaaaatagtctcttaaaatcctaatccaatacacccc 37916902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 50019240 - 50019285
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||    
T  50019240 tttttttattaaaatagtcttttaaaattctaatccaatacacccc 50019285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 54342196 - 54342241
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||    
T  54342196 tttttttattaaaatagtcttttaaaattctaatccaatacacccc 54342241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 29649175 - 29649131
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  |||||||| |||||    
T  29649175 tttttttattaaaatagtcttttaaaatcctaatccaattcaccc 29649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 44929904 - 44929876
Alignment:
Q  24 tcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||||||||    
T  44929904 tcttttaaaatctcaatccaatacacccc 44929876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 49834017 - 49833973
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||    
T  49834017 tttttttattaaaatagtcttttaaaatcctaatccaatataccc 49833973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 56399082 - 56399126
Alignment:
Q  9 tttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||||| ||||  |||||||||||||||||| ||||||||||||    
T  56399082 tttctatcaaaacggtcttttaaaatctcaattcaatacacccct 56399126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 26881861 - 26881820
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  26881861 tttttctatcaaaatagtcttttaaaatctcaatccaataca 26881820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 45319516 - 45319561
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  45319516 tttttctatcaaaacagtcttttaaaatctcaatccaatacacccc 45319561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 10897693 - 10897728
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  10897693 aaaatagtcttttaaaatctcaatccaatacacccc 10897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 14389465 - 14389508
Alignment:
Q  9 tttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  14389465 tttctatcaaaacagtcttttaaaatctcaatccaatacacccc 14389508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 36403135 - 36403170
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  36403135 aaaatagtcttttaaaatctcaatccaatacacccc 36403170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 48176691 - 48176644
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccctt 54  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||    
T  48176691 tttttttattaaaatagtcttttaaaatcctaatccaatacacccctt 48176644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 45535798 - 45535840
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  45535798 tttttctatcaaaacagtcttttaaaatctcaatccaatacac 45535840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 52706429 - 52706479
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaa 57  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||| ||||    
T  52706429 tttttctatcaaaacattcttttaaaatctcaatccaatacaccccctaaa 52706479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 6313625 - 6313670
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  6313625 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 6313670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 9321664 - 9321619
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||    
T  9321664 tttttttattaaaatagtcttttaaaatcccaattcaatacacccc 9321619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25613141 - 25613186
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  25613141 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 25613186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 28386603 - 28386558
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  28386603 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 28386558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 29395583 - 29395538
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  29395583 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 29395538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 33242496 - 33242461
Alignment:
Q  17 aaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||| |||||||||||    
T  33242496 aaaatagtcttttaaaatctcaatgcaatacacccc 33242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 46329023 - 46329062
Alignment:
Q  13 tattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  46329023 tattaaaatagtcttttaaaatcctaatccaatacacccc 46329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 9832768 - 9832802
Alignment:
Q  18 aaatagtcttttaaaatctcaatccaatacacccc 52  Q
    |||||||||||||||||||||||| ||||||||||    
T  9832768 aaatagtcttttaaaatctcaatctaatacacccc 9832802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 49232033 - 49232079
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccct 53  Q
    ||||| ||||||||| |||||||||||||  ||||||||||||||||    
T  49232033 tttttttattaaaattgtcttttaaaatcctaatccaatacacccct 49232079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 1087556 - 1087507
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaa 56  Q
    |||||||| |||||||||| |||||||||  || ||||||||||||||||    
T  1087556 tttttctaataaaatagtcctttaaaatccaaaaccaatacaccccttaa 1087507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 8140021 - 8139980
Alignment:
Q  8 ttttctattaaaatagtcttttaaaatctcaatccaatacac 49  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  8140021 ttttatattaaaatagtcttttaaaattttaatccaatacac 8139980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 9174936 - 9174969
Alignment:
Q  15 ttaaaatagtcttttaaaatctcaatccaataca 48  Q
    ||||||||||||||||||||||||||| ||||||    
T  9174936 ttaaaatagtcttttaaaatctcaatcaaataca 9174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 20111727 - 20111682
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||| ||||||||||    
T  20111727 tttttttattaaaatagtcttttaaaatcgtaatcaaatacacccc 20111682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 25830405 - 25830360
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  ||| |||||||||||    
T  25830405 tttttttattaaaatagtcttttaaaatcctaattcaatacacccc 25830360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 51702643 - 51702688
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||    
T  51702643 tttttttattaaaatagtcttttaaaatcctaatcctatacacccc 51702688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 15835374 - 15835410
Alignment:
Q  16 taaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||  |||||||||||||||    
T  15835374 taaaatagtcttttaaaatcctaatccaatacacccc 15835410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 3619 - 3574
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  3619 tttttttattaaaatagtcttttaaaatcctaatccaatacacccc 3574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 3158 - 3114
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||    
T  3158 tttttttattaaaatagtcttttaaaatcttaatctaatacaccc 3114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 36445 - 36401
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccc 51  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  36445 tttttttattaaaatagtcttttaaaatcctaatccaatacaccc 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 21822 - 21865
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacc 50  Q
    ||||| |||||||||| ||||||||||||| |||||||||||||    
T  21822 tttttgtattaaaataatcttttaaaatcttaatccaatacacc 21865  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 57215 - 57170
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||| ||||||||||||||||||||||   |||||||||||||||    
T  57215 tttttttattaaaatagtcttttaaaattctaatccaatacacccc 57170  T

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Target: scaffold1521 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 1337 - 1285
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaata 59  Q
    ||||| |||||||||||||||||||||||  ||| |||||| |||| ||||||    
T  1337 tttttttattaaaatagtcttttaaaatcctaattcaatactccccctaaata 1285  T

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Target: scaffold0492 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 12094 - 12130
Alignment:
Q  16 taaaatagtcttttaaaatctcaatccaatacacccc 52  Q
    ||||||||||||||||||||  |||||||||||||||    
T  12094 taaaatagtcttttaaaatcctaatccaatacacccc 12130  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 16192 - 16140
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaata 59  Q
    ||||| |||||||||||||||||||||||  ||| |||||| |||| ||||||    
T  16192 tttttttattaaaatagtcttttaaaatcctaattcaatactccccctaaata 16140  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 29382 - 29434
Alignment:
Q  7 tttttctattaaaatagtcttttaaaatctcaatccaatacaccccttaaata 59  Q
    ||||| |||||||||||||||||||||||  ||| |||||| |||| ||||||    
T  29382 tttttttattaaaatagtcttttaaaatcctaattcaatactccccctaaata 29434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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