View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16635_low_29 (Length: 214)

Name: NF16635_low_29
Description: NF16635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16635_low_29
NF16635_low_29
[»] chr4 (28 HSPs)
chr4 (160-214)||(37050700-37050755)
chr4 (160-214)||(32104084-32104139)
chr4 (160-214)||(35828273-35828328)
chr4 (166-214)||(1033523-1033572)
chr4 (166-214)||(12821170-12821219)
chr4 (166-210)||(24550818-24550863)
chr4 (166-214)||(30044658-30044707)
chr4 (166-214)||(42856568-42856617)
chr4 (166-214)||(47462110-47462159)
chr4 (166-214)||(49535890-49535939)
chr4 (166-214)||(49882783-49882832)
chr4 (166-214)||(50779865-50779914)
chr4 (166-214)||(54907966-54908015)
chr4 (172-214)||(51281477-51281520)
chr4 (166-214)||(3084316-3084365)
chr4 (166-214)||(3848892-3848941)
chr4 (185-214)||(4379332-4379361)
chr4 (166-210)||(5397018-5397063)
chr4 (166-214)||(7512772-7512821)
chr4 (166-210)||(9569480-9569525)
chr4 (154-214)||(14285088-14285149)
chr4 (185-214)||(25586401-25586430)
chr4 (185-214)||(28033217-28033246)
chr4 (166-210)||(37166143-37166188)
chr4 (166-210)||(42154216-42154261)
chr4 (166-214)||(42412062-42412111)
chr4 (166-210)||(46488195-46488240)
chr4 (166-209)||(23974721-23974765)
[»] chr8 (37 HSPs)
chr8 (166-214)||(9569729-9569778)
chr8 (159-214)||(37295124-37295180)
chr8 (166-214)||(2733621-2733670)
chr8 (166-214)||(6845057-6845106)
chr8 (166-214)||(19649572-19649621)
chr8 (166-214)||(26690699-26690748)
chr8 (166-214)||(33067462-33067511)
chr8 (166-210)||(38953558-38953603)
chr8 (163-214)||(2442764-2442816)
chr8 (172-214)||(3054035-3054078)
chr8 (160-214)||(25893850-25893905)
chr8 (160-214)||(34540138-34540193)
chr8 (172-214)||(35810248-35810291)
chr8 (180-214)||(43820888-43820922)
chr8 (166-214)||(4312138-4312187)
chr8 (166-210)||(4430813-4430858)
chr8 (166-210)||(6317305-6317350)
chr8 (185-214)||(6436708-6436737)
chr8 (166-214)||(10096617-10096666)
chr8 (185-214)||(11100362-11100391)
chr8 (166-214)||(14188095-14188144)
chr8 (185-214)||(24242659-24242688)
chr8 (166-214)||(24654979-24655028)
chr8 (185-214)||(25063365-25063394)
chr8 (166-214)||(25213634-25213683)
chr8 (166-214)||(25250790-25250839)
chr8 (166-214)||(27928163-27928212)
chr8 (185-214)||(31639176-31639205)
chr8 (185-214)||(34143428-34143457)
chr8 (166-214)||(34711629-34711678)
chr8 (166-214)||(36586487-36586536)
chr8 (163-211)||(37708524-37708573)
chr8 (166-210)||(38070559-38070604)
chr8 (185-214)||(39666969-39666998)
chr8 (166-214)||(44604895-44604944)
chr8 (166-210)||(44814868-44814913)
chr8 (163-214)||(37817378-37817430)
[»] chr1 (25 HSPs)
chr1 (158-214)||(43086545-43086602)
chr1 (166-214)||(10635494-10635543)
chr1 (166-214)||(19338252-19338301)
chr1 (166-214)||(28999379-28999428)
chr1 (166-214)||(29005095-29005144)
chr1 (166-214)||(34010099-34010148)
chr1 (166-214)||(40958648-40958697)
chr1 (166-214)||(42631059-42631108)
chr1 (166-214)||(43676098-43676147)
chr1 (166-214)||(48391961-48392010)
chr1 (159-210)||(24119654-24119706)
chr1 (160-214)||(15331136-15331191)
chr1 (172-214)||(20164147-20164190)
chr1 (180-214)||(32880653-32880687)
chr1 (185-214)||(270395-270424)
chr1 (166-214)||(3315799-3315848)
chr1 (166-214)||(13018078-13018127)
chr1 (185-214)||(17068177-17068206)
chr1 (185-214)||(18216369-18216398)
chr1 (166-210)||(40809291-40809336)
chr1 (185-214)||(47429666-47429695)
chr1 (166-210)||(48314172-48314217)
chr1 (166-210)||(49500866-49500911)
chr1 (166-214)||(49948246-49948295)
chr1 (178-214)||(9705545-9705581)
[»] chr7 (28 HSPs)
chr7 (163-214)||(42557576-42557628)
chr7 (166-214)||(3497591-3497640)
chr7 (166-214)||(4887587-4887636)
chr7 (166-214)||(10061090-10061139)
chr7 (166-214)||(27396388-27396437)
chr7 (166-210)||(37410780-37410825)
chr7 (166-214)||(48612522-48612571)
chr7 (171-214)||(5508695-5508739)
chr7 (164-211)||(33512800-33512848)
chr7 (166-212)||(45041809-45041856)
chr7 (180-214)||(16816711-16816745)
chr7 (180-214)||(21226085-21226119)
chr7 (157-210)||(48729762-48729816)
chr7 (185-214)||(1573915-1573944)
chr7 (166-210)||(2354875-2354920)
chr7 (185-214)||(4106579-4106608)
chr7 (166-214)||(6596547-6596596)
chr7 (185-214)||(8946453-8946482)
chr7 (185-214)||(10166895-10166924)
chr7 (166-214)||(17895639-17895688)
chr7 (185-214)||(19258449-19258478)
chr7 (166-214)||(19306717-19306766)
chr7 (185-214)||(31717322-31717351)
chr7 (166-210)||(35157162-35157207)
chr7 (166-214)||(35849300-35849349)
chr7 (185-214)||(40013289-40013318)
chr7 (166-210)||(45236935-45236980)
chr7 (158-214)||(47182800-47182857)
[»] chr3 (40 HSPs)
chr3 (163-214)||(29212139-29212191)
chr3 (166-214)||(4232251-4232300)
chr3 (166-214)||(4833183-4833232)
chr3 (166-214)||(6583309-6583358)
chr3 (166-214)||(8381084-8381133)
chr3 (166-214)||(8507937-8507986)
chr3 (162-214)||(10473988-10474041)
chr3 (166-214)||(13525174-13525223)
chr3 (166-214)||(35069318-35069367)
chr3 (166-214)||(54097514-54097563)
chr3 (169-214)||(1218445-1218491)
chr3 (184-214)||(8128364-8128394)
chr3 (166-211)||(11312595-11312641)
chr3 (180-214)||(22371470-22371504)
chr3 (166-211)||(24250730-24250776)
chr3 (180-214)||(24650621-24650655)
chr3 (180-214)||(35359737-35359771)
chr3 (166-214)||(47069011-47069061)
chr3 (166-214)||(1242222-1242271)
chr3 (166-210)||(2687564-2687609)
chr3 (185-214)||(3440751-3440780)
chr3 (166-210)||(3917771-3917816)
chr3 (166-214)||(4976782-4976831)
chr3 (185-214)||(9609957-9609986)
chr3 (185-214)||(11751237-11751266)
chr3 (185-214)||(17500952-17500981)
chr3 (185-214)||(24273954-24273983)
chr3 (166-210)||(24751758-24751803)
chr3 (166-214)||(25118780-25118829)
chr3 (185-214)||(27396879-27396908)
chr3 (185-214)||(28171053-28171082)
chr3 (166-214)||(30553042-30553091)
chr3 (166-214)||(32961052-32961101)
chr3 (183-212)||(35240053-35240082)
chr3 (185-214)||(40840194-40840223)
chr3 (166-214)||(41464669-41464718)
chr3 (185-214)||(43898037-43898066)
chr3 (185-214)||(46838801-46838830)
chr3 (159-214)||(12948808-12948864)
chr3 (159-214)||(50238914-50238970)
[»] chr6 (20 HSPs)
chr6 (160-214)||(18861841-18861896)
chr6 (166-214)||(8448216-8448265)
chr6 (166-214)||(8457020-8457069)
chr6 (166-214)||(31205257-31205306)
chr6 (172-214)||(735456-735499)
chr6 (160-210)||(1241594-1241645)
chr6 (160-214)||(31747060-31747115)
chr6 (180-214)||(4480494-4480528)
chr6 (157-214)||(8329632-8329690)
chr6 (166-211)||(13540238-13540284)
chr6 (185-214)||(1686308-1686337)
chr6 (166-210)||(2314677-2314722)
chr6 (166-214)||(4083592-4083641)
chr6 (159-211)||(8487630-8487683)
chr6 (185-214)||(9949225-9949254)
chr6 (166-214)||(10263145-10263194)
chr6 (185-214)||(16496726-16496755)
chr6 (166-210)||(17534601-17534646)
chr6 (185-214)||(32643802-32643831)
chr6 (159-210)||(21513070-21513122)
[»] chr5 (32 HSPs)
chr5 (160-214)||(29119605-29119660)
chr5 (169-214)||(34930233-34930279)
chr5 (166-214)||(1244255-1244304)
chr5 (166-214)||(2103031-2103080)
chr5 (166-214)||(6672246-6672295)
chr5 (166-214)||(17869198-17869247)
chr5 (166-214)||(18473919-18473968)
chr5 (166-214)||(23311247-23311296)
chr5 (166-214)||(25328378-25328427)
chr5 (166-214)||(28143306-28143355)
chr5 (166-214)||(36569284-36569333)
chr5 (166-214)||(36726994-36727043)
chr5 (166-214)||(41562463-41562512)
chr5 (171-214)||(16906347-16906391)
chr5 (166-211)||(9902578-9902624)
chr5 (180-214)||(27390001-27390035)
chr5 (180-214)||(36854232-36854266)
chr5 (185-214)||(1277463-1277492)
chr5 (185-214)||(1650316-1650345)
chr5 (166-210)||(4164964-4165009)
chr5 (166-214)||(9054045-9054094)
chr5 (166-214)||(12707950-12707999)
chr5 (166-210)||(12878196-12878241)
chr5 (185-214)||(21728686-21728715)
chr5 (185-214)||(22620725-22620754)
chr5 (185-214)||(23074718-23074747)
chr5 (166-214)||(26267075-26267124)
chr5 (185-214)||(34856606-34856635)
chr5 (185-214)||(37067726-37067755)
chr5 (166-214)||(37940923-37940972)
chr5 (166-214)||(42448216-42448265)
chr5 (163-214)||(10165534-10165586)
[»] scaffold0882 (1 HSPs)
scaffold0882 (166-211)||(3774-3820)
[»] chr2 (23 HSPs)
chr2 (157-214)||(4772299-4772357)
chr2 (166-214)||(20251559-20251608)
chr2 (166-214)||(32023257-32023306)
chr2 (166-214)||(38490474-38490523)
chr2 (158-214)||(42133516-42133573)
chr2 (159-214)||(34481745-34481801)
chr2 (160-210)||(38463138-38463189)
chr2 (166-211)||(7975091-7975137)
chr2 (166-211)||(36754818-36754864)
chr2 (185-214)||(12236146-12236175)
chr2 (166-210)||(15897219-15897264)
chr2 (166-210)||(23080176-23080221)
chr2 (166-214)||(33607048-33607097)
chr2 (166-210)||(34667049-34667094)
chr2 (166-214)||(35476564-35476613)
chr2 (185-214)||(35687860-35687889)
chr2 (185-214)||(39070044-39070073)
chr2 (166-214)||(40592318-40592367)
chr2 (166-210)||(42160335-42160380)
chr2 (185-214)||(42414530-42414559)
chr2 (166-210)||(45049390-45049435)
chr2 (166-209)||(2287388-2287432)
chr2 (163-214)||(3048544-3048596)
[»] scaffold0432 (1 HSPs)
scaffold0432 (166-214)||(9372-9421)
[»] scaffold0402 (1 HSPs)
scaffold0402 (166-214)||(1315-1364)
[»] scaffold0287 (1 HSPs)
scaffold0287 (166-214)||(1132-1181)
[»] scaffold0595 (1 HSPs)
scaffold0595 (157-214)||(341-399)
[»] scaffold0036 (1 HSPs)
scaffold0036 (180-214)||(95169-95203)
[»] scaffold0778 (1 HSPs)
scaffold0778 (166-214)||(823-872)
[»] scaffold0457 (1 HSPs)
scaffold0457 (166-210)||(6784-6829)
[»] scaffold0179 (1 HSPs)
scaffold0179 (166-214)||(4089-4138)
[»] scaffold0061 (1 HSPs)
scaffold0061 (166-210)||(8937-8982)
[»] scaffold0024 (1 HSPs)
scaffold0024 (185-214)||(160473-160502)
[»] scaffold0008 (1 HSPs)
scaffold0008 (185-214)||(39387-39416)
[»] scaffold0163 (1 HSPs)
scaffold0163 (163-214)||(26991-27043)


Alignment Details
Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 37050700 - 37050755
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  37050700 attcagaagtcttagctcaactggcaaaatgccgaaattgttaggccggatgccat 37050755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 32104139 - 32104084
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  32104139 attcagaagtcttagctaaaatggcaaaatgccgaaattgttaggccggatgccat 32104084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 35828273 - 35828328
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  35828273 attcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 35828328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 1033572 - 1033523
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  1033572 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 1033523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 12821170 - 12821219
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  12821170 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 12821219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 24550818 - 24550863
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  24550818 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatg 24550863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 30044707 - 30044658
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  30044707 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 30044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 42856568 - 42856617
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  42856568 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 42856617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 47462159 - 47462110
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  47462159 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 47462110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 49535890 - 49535939
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  49535890 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 49535939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 49882832 - 49882783
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  49882832 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 49882783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 50779914 - 50779865
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  50779914 aagtcttagttcaactggcaaaatgccgaaattgttaggccggatgccat 50779865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 54908015 - 54907966
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  54908015 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 54907966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 51281477 - 51281520
Alignment:
Q  172 tagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  51281477 tagctcaactggcaaaatgccgaaattgttaggccggatgccat 51281520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 3084365 - 3084316
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  3084365 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 3084316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 3848941 - 3848892
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||||||||||||| |||||||||||||||    
T  3848941 aagtcctagctcaactggcaaaatgccgaaattgctaggccggatgccat 3848892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 4379332 - 4379361
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  4379332 aaatgccgaaattgttaggccggatgccat 4379361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 5397063 - 5397018
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  5397063 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 5397018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 7512772 - 7512821
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||    
T  7512772 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccat 7512821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 9569480 - 9569525
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  9569480 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 9569525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 14285088 - 14285149
Alignment:
Q  154 aacgtaattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| || ||||| |||||||| || | ||||||| ||||||||||||||||||||||    
T  14285088 aacgtaatccagaagtcctagctcaactgacaaaatgccaaaattgttaggccggatgccat 14285149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 25586430 - 25586401
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  25586430 aaatgccgaaattgttaggccggatgccat 25586401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 28033217 - 28033246
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  28033217 aaatgccgaaattgttaggccggatgccat 28033246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 37166143 - 37166188
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  37166143 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 37166188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 42154261 - 42154216
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  42154261 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 42154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 42412111 - 42412062
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||||||||    
T  42412111 aagtcatagctcaactggcaaaatgccgaaattgttaggccagatgccat 42412062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 46488240 - 46488195
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  46488240 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 46488195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 23974765 - 23974721
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggat 209  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||    
T  23974765 aagtcctagctcaactggcaaaatgccgaaattgttaggccggat 23974721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 9569729 - 9569778
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  9569729 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatgccat 9569778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 37295124 - 37295180
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  37295124 aattcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 37295180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 2733621 - 2733670
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  2733621 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 2733670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 6845106 - 6845057
Alignment:
Q  166 aagtcttagctcaat-ggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  6845106 aagtcctagctcaattggcaaaatgccgaaattgttaggccggatgccat 6845057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 19649621 - 19649572
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  19649621 aagtcatagctcaactggcaaaatgccgaaattgttaggccggatgccat 19649572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 26690699 - 26690748
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  26690699 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 26690748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 33067511 - 33067462
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  33067511 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 33067462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 38953603 - 38953558
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  38953603 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatg 38953558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 2442764 - 2442816
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  2442764 cataagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 2442816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 3054035 - 3054078
Alignment:
Q  172 tagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  3054035 tagctcaactggcaaaatgccgaaattgttaggccggatgccat 3054078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 25893850 - 25893905
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  25893850 attcagaagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccat 25893905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 34540193 - 34540138
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||| ||| |||| |||| ||||||||||||||||||||||||||||||    
T  34540193 attcagaagtcctagttcaactggcaaaatgccgaaattgttaggccggatgccat 34540138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 35810248 - 35810291
Alignment:
Q  172 tagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  35810248 tagctcaactggcaaaatgccgaaattgttaggccggatgccat 35810291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 43820888 - 43820922
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  43820888 tggcaaaatgccgaaattgttaggccggatgccat 43820922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4312138 - 4312187
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  4312138 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 4312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 4430858 - 4430813
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  4430858 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 4430813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 6317305 - 6317350
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  6317305 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 6317350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 6436708 - 6436737
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  6436708 aaatgccgaaattgttaggccggatgccat 6436737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 10096617 - 10096666
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  10096617 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 10096666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 11100391 - 11100362
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  11100391 aaatgccgaaattgttaggccggatgccat 11100362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 14188095 - 14188144
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  14188095 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 14188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 24242688 - 24242659
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  24242688 aaatgccgaaattgttaggccggatgccat 24242659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 24654979 - 24655028
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||    
T  24654979 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccat 24655028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 25063365 - 25063394
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  25063365 aaatgccgaaattgttaggccggatgccat 25063394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 25213634 - 25213683
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  25213634 aagtcctagctcaactggcaaaatgccgaaattgttagaccggatgccat 25213683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 25250790 - 25250839
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||    
T  25250790 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccat 25250839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 27928163 - 27928212
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  27928163 aagtcctagctcaactggcaaaatgccgaaattgttagaccggatgccat 27928212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 31639205 - 31639176
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  31639205 aaatgccgaaattgttaggccggatgccat 31639176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 34143457 - 34143428
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  34143457 aaatgccgaaattgttaggccggatgccat 34143428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 34711678 - 34711629
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  34711678 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 34711629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 36586487 - 36586536
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  36586487 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 36586536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 37708573 - 37708524
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    |||||||| |||||||| |||| ||||||||||||||||||| |||||||    
T  37708573 cataagtcctagctcaactggcaaaatgccgaaattgttaggacggatgc 37708524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 38070604 - 38070559
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  38070604 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 38070559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 39666998 - 39666969
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  39666998 aaatgccgaaattgttaggccggatgccat 39666969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 44604944 - 44604895
Alignment:
Q  166 aagtcttagctcaat-ggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||||||| ||| ||||||||||||||||||| ||||||||||    
T  44604944 aagtcctagctcaattggcaaaatgccgaaattgttaggtcggatgccat 44604895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 44814868 - 44814913
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  44814868 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 44814913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 37817378 - 37817430
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||||||| |||| ||||| ||||||||||||| ||||||||||    
T  37817378 cataagtcctagctcaactggcaaaatgacgaaattgttaggtcggatgccat 37817430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 43086602 - 43086545
Alignment:
Q  158 taattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  43086602 taatccataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 43086545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 10635494 - 10635543
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  10635494 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 10635543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 19338301 - 19338252
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  19338301 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 19338252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 28999379 - 28999428
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  28999379 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 28999428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 29005095 - 29005144
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  29005095 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 29005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 34010099 - 34010148
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  34010099 aagtcttagctcaactggcaaaatgtcgaaattgttaggccggatgccat 34010148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 40958697 - 40958648
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  40958697 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 40958648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 42631108 - 42631059
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  42631108 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 42631059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 43676147 - 43676098
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  43676147 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 43676098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 48391961 - 48392010
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  48391961 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 48392010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 24119654 - 24119706
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  24119654 aattcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 24119706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15331191 - 15331136
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||| |||||||| |||  ||||||||||||||||||| ||||||||||    
T  15331191 attcataagtcctagctcaactggaaaaatgccgaaattgttaggtcggatgccat 15331136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 20164190 - 20164147
Alignment:
Q  172 tagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  20164190 tagctcaactggcaaaatgccgaaattgttaggccggatgccat 20164147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 32880687 - 32880653
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  32880687 tggcaaaatgccgaaattgttaggccggatgccat 32880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 270424 - 270395
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  270424 aaatgccgaaattgttaggccggatgccat 270395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 3315799 - 3315848
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||||||||||    
T  3315799 aagtcctagctcaactggcaaaatgccgacattgttaggccggatgccat 3315848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 13018078 - 13018127
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| |||| || ||||||||||||||| |||||||||||    
T  13018078 aagtcttagctcaactggcaaagtgccgaaattgttagaccggatgccat 13018127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 17068177 - 17068206
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  17068177 aaatgccgaaattgttaggccggatgccat 17068206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 18216369 - 18216398
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  18216369 aaatgccgaaattgttaggccggatgccat 18216398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 40809336 - 40809291
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  40809336 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 40809291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 47429695 - 47429666
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  47429695 aaatgccgaaattgttaggccggatgccat 47429666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 48314172 - 48314217
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  48314172 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 48314217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 49500866 - 49500911
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  49500866 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 49500911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 49948246 - 49948295
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  49948246 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 49948295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 9705545 - 9705581
Alignment:
Q  178 aatggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  9705545 aatggcaaaatgccaaaattgttaggccggatgccat 9705581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 42557628 - 42557576
Alignment:
Q  163 cataagtcttagctcaat-ggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  42557628 cataagtcctagctcaattggcaaaatgccgaaattgttaggccggatgccat 42557576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 3497640 - 3497591
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  3497640 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 3497591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4887636 - 4887587
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  4887636 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 4887587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 10061139 - 10061090
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  10061139 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 10061090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 27396437 - 27396388
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  27396437 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 27396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 37410825 - 37410780
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  37410825 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatg 37410780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 48612522 - 48612571
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  48612522 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 48612571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 5508695 - 5508739
Alignment:
Q  171 ttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  5508695 ttagctcaactggcaaaatgccgaaattgttaggccggatgccat 5508739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 33512800 - 33512848
Alignment:
Q  164 ataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  33512800 ataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgc 33512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 45041856 - 45041809
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgcc 212  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  45041856 aagtcttagctcaactggcaaaatgccgaaattgttaggtcggatgcc 45041809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 16816711 - 16816745
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  16816711 tggcaaaatgccgaaattgttaggccggatgccat 16816745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 21226085 - 21226119
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  21226085 tggcaaaatgccgaaattgttaggccggatgccat 21226119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 48729816 - 48729762
Alignment:
Q  157 gtaattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| || ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  48729816 gtaatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 48729762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 1573944 - 1573915
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  1573944 aaatgccgaaattgttaggccggatgccat 1573915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 2354920 - 2354875
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  2354920 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 2354875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 4106579 - 4106608
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  4106579 aaatgccgaaattgttaggccggatgccat 4106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 6596547 - 6596596
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||    
T  6596547 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccat 6596596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 8946453 - 8946482
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  8946453 aaatgccgaaattgttaggccggatgccat 8946482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 10166895 - 10166924
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  10166895 aaatgccgaaattgttaggccggatgccat 10166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 17895639 - 17895688
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  17895639 aagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccat 17895688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 19258449 - 19258478
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  19258449 aaatgccgaaattgttaggccggatgccat 19258478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 19306717 - 19306766
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||| ||||||||||||||||    
T  19306717 aagtcctagctcaactggcaaaatgccgaaattattaggccggatgccat 19306766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 31717322 - 31717351
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  31717322 aaatgccgaaattgttaggccggatgccat 31717351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 35157207 - 35157162
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  35157207 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 35157162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 35849300 - 35849349
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| || |||||||||||||||||||||||||||    
T  35849300 aagtcctagctcaactggcaaagtgccgaaattgttaggccggatgccat 35849349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 40013289 - 40013318
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  40013289 aaatgccgaaattgttaggccggatgccat 40013318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 45236935 - 45236980
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  45236935 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 45236980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 47182800 - 47182857
Alignment:
Q  158 taattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| |||||||| |||||||| |||| ||||||| |||||||||| |||||||||||    
T  47182800 taatccataagtcctagctcaactggcaaaatgccaaaattgttagaccggatgccat 47182857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 29212191 - 29212139
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  29212191 cataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 29212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4232300 - 4232251
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  4232300 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 4232251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4833232 - 4833183
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  4833232 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 4833183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 6583358 - 6583309
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  6583358 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 6583309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 8381084 - 8381133
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  8381084 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 8381133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 8507937 - 8507986
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  8507937 aagtcttagctcaactggaaaaatgccgaaattgttaggccggatgccat 8507986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 10474041 - 10473988
Alignment:
Q  162 tcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  10474041 tcataagtcctagctcaactggcaaaatgctgaaattgttaggccggatgccat 10473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 13525174 - 13525223
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  13525174 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 13525223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 35069318 - 35069367
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  35069318 aagtcttagttcaactggcaaaatgccgaaattgttaggccggatgccat 35069367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 54097563 - 54097514
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  54097563 aagtcctagctcaaatggcaaaatgccgaaattgttaggccggatgccat 54097514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 1218491 - 1218445
Alignment:
Q  169 tcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  1218491 tcttagctcaactggtaaaatgccgaaattgttaggccggatgccat 1218445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 8128394 - 8128364
Alignment:
Q  184 gaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||||||||||||||||||||    
T  8128394 gaaatgccgaaattgttaggccggatgccat 8128364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 11312595 - 11312641
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  11312595 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgc 11312641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 22371470 - 22371504
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  22371470 tggcaaaatgccgaaattgttaggccggatgccat 22371504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 24250730 - 24250776
Alignment:
Q  166 aagtcttagctcaat-ggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  24250730 aagtcctagctcaattggcaaaatgccgaaattgttaggccggatgc 24250776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 24650655 - 24650621
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  24650655 tggcaaaatgccgaaattgttaggccggatgccat 24650621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 35359737 - 35359771
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  35359737 tggcaaaatgccgaaattgttaggccggatgccat 35359771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 47069011 - 47069061
Alignment:
Q  166 aagtcttagctcaa-tggcgaaa-tgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  47069011 aagtcttagctcaactggcaaaaatgccgaaattgttaggccggatgccat 47069061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 1242222 - 1242271
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||| ||||||||||||||||    
T  1242222 aagtcctagctcaactggcaaaatgccgaaattattaggccggatgccat 1242271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 2687564 - 2687609
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  2687564 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 2687609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 3440751 - 3440780
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  3440751 aaatgccgaaattgttaggccggatgccat 3440780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 3917771 - 3917816
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  3917771 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 3917816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4976831 - 4976782
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||| ||||||||||||||||||||||    
T  4976831 aagtcctagctcaactggcaaaatgccaaaattgttaggccggatgccat 4976782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 9609957 - 9609986
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  9609957 aaatgccgaaattgttaggccggatgccat 9609986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 11751237 - 11751266
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  11751237 aaatgccgaaattgttaggccggatgccat 11751266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 17500952 - 17500981
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  17500952 aaatgccgaaattgttaggccggatgccat 17500981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 24273983 - 24273954
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  24273983 aaatgccgaaattgttaggccggatgccat 24273954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 24751758 - 24751803
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  24751758 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 24751803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 25118829 - 25118780
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||||||||| | || ||||| ||||||||||||||||||||||||    
T  25118829 aagtcttagctcaactagcaaaatgtcgaaattgttaggccggatgccat 25118780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 27396879 - 27396908
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  27396879 aaatgccgaaattgttaggccggatgccat 27396908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 28171082 - 28171053
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  28171082 aaatgccgaaattgttaggccggatgccat 28171053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 30553091 - 30553042
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  30553091 aagtcctagctcaactggcaaaatgccgaaattgttagaccggatgccat 30553042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 32961101 - 32961052
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||||||||    
T  32961101 aagtcctagctcaactggcaaaatgccgaaattgttaggccagatgccat 32961052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 35240053 - 35240082
Alignment:
Q  183 cgaaatgccgaaattgttaggccggatgcc 212  Q
    ||||||||||||||||||||||||||||||    
T  35240053 cgaaatgccgaaattgttaggccggatgcc 35240082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 40840194 - 40840223
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  40840194 aaatgccgaaattgttaggccggatgccat 40840223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 41464669 - 41464718
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  41464669 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 41464718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 43898066 - 43898037
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  43898066 aaatgccgaaattgttaggccggatgccat 43898037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 46838830 - 46838801
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  46838830 aaatgccgaaattgttaggccggatgccat 46838801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 12948808 - 12948864
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||| ||||| |||||||| |||  ||||| ||||||||||||||||||||||||    
T  12948808 aattcagaagtcctagctcaactggtaaaatgacgaaattgttaggccggatgccat 12948864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 50238970 - 50238914
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||| ||||| |||||||| |||  ||||| ||||||||||||||||||||||||    
T  50238970 aattcagaagtcctagctcaactggtaaaatgtcgaaattgttaggccggatgccat 50238914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 18861896 - 18861841
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  18861896 attcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 18861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 8448265 - 8448216
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  8448265 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 8448216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 8457069 - 8457020
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  8457069 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 8457020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 31205306 - 31205257
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  31205306 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 31205257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 735456 - 735499
Alignment:
Q  172 tagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  735456 tagctcaactggcaaaatgccgaaattgttaggccggatgccat 735499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 1241594 - 1241645
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  1241594 attcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 1241645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 31747115 - 31747060
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| || ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  31747115 attcagaaatcttagctcaactggtaaaatgccgaaattgttaggccggatgccat 31747060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 4480494 - 4480528
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  4480494 tggcaaaatgccgaaattgttaggccggatgccat 4480528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 8329690 - 8329632
Alignment:
Q  157 gtaattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| || ||||| |||||||| |||| | ||||||||||||||||||||||||||||    
T  8329690 gtaatccaaaagtcctagctcaactggcaatatgccgaaattgttaggccggatgccat 8329632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 13540284 - 13540238
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  13540284 aagtcctagctcaaatggcaaaatgccgaaattgttaggccggatgc 13540238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 1686337 - 1686308
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  1686337 aaatgccgaaattgttaggccggatgccat 1686308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 2314722 - 2314677
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  2314722 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 2314677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4083592 - 4083641
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  4083592 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 4083641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 8487683 - 8487630
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    |||||| |||||||||||||| |||  |||||||||||||||||||||| ||||    
T  8487683 aattcagaagtcttagctcaactggtaaaatgccgaaattgttaggccgaatgc 8487630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 9949254 - 9949225
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  9949254 aaatgccgaaattgttaggccggatgccat 9949225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 10263194 - 10263145
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| || |||||||||||||||||||||||||||    
T  10263194 aagtcctagctcaactggcaaagtgccgaaattgttaggccggatgccat 10263145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 16496755 - 16496726
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  16496755 aaatgccgaaattgttaggccggatgccat 16496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 17534646 - 17534601
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  17534646 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 17534601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 32643831 - 32643802
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  32643831 aaatgccgaaattgttaggccggatgccat 32643802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 21513070 - 21513122
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||| ||||| |||||||| |||| ||||| ||||||||||||||||||||    
T  21513070 aattcagaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatg 21513122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 29119605 - 29119660
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  29119605 attcagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 29119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 34930233 - 34930279
Alignment:
Q  169 tcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  34930233 tcttagctcaactggcaaaatgccgaaattgttaggccggatgccat 34930279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 1244304 - 1244255
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  1244304 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 1244255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 2103031 - 2103080
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  2103031 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 2103080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 6672246 - 6672295
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  6672246 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 6672295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 17869247 - 17869198
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  17869247 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 17869198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 18473919 - 18473968
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  18473919 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 18473968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 23311296 - 23311247
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  23311296 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 23311247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 25328427 - 25328378
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  25328427 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 25328378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 28143355 - 28143306
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  28143355 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 28143306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 36569284 - 36569333
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  36569284 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 36569333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 36726994 - 36727043
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  36726994 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 36727043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 41562463 - 41562512
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  41562463 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 41562512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 16906347 - 16906391
Alignment:
Q  171 ttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||    
T  16906347 ttagctcaactggcaaaatgccgaaattgttaggccggatgccat 16906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 9902624 - 9902578
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  9902624 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgc 9902578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 27390035 - 27390001
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  27390035 tggcaaaatgccgaaattgttaggccggatgccat 27390001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 36854266 - 36854232
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  36854266 tggcaaaatgccgaaattgttaggccggatgccat 36854232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 1277463 - 1277492
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  1277463 aaatgccgaaattgttaggccggatgccat 1277492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 1650316 - 1650345
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  1650316 aaatgccgaaattgttaggccggatgccat 1650345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 4164964 - 4165009
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  4164964 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 4165009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 9054094 - 9054045
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| |||| |||||||||||||||||||||||||    
T  9054094 aagtcctagctcaactggcaaaataccgaaattgttaggccggatgccat 9054045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 12707999 - 12707950
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  12707999 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 12707950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 12878241 - 12878196
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  12878241 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 12878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 21728686 - 21728715
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  21728686 aaatgccgaaattgttaggccggatgccat 21728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 22620754 - 22620725
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  22620754 aaatgccgaaattgttaggccggatgccat 22620725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 23074747 - 23074718
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  23074747 aaatgccgaaattgttaggccggatgccat 23074718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 26267124 - 26267075
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||| ||||||||||||    
T  26267124 aagtcgtagctcaactggcaaaatgccgaaattgttaagccggatgccat 26267075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 34856606 - 34856635
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  34856606 aaatgccgaaattgttaggccggatgccat 34856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 37067726 - 37067755
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  37067726 aaatgccgaaattgttaggccggatgccat 37067755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 37940923 - 37940972
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  37940923 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 37940972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 42448216 - 42448265
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  42448216 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 42448265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 10165534 - 10165586
Alignment:
Q  163 cataagtcttagctcaat-ggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| || |||||| ||| |||||||||||||||||| |||||||||||    
T  10165534 cataagtcctaactcaattggcaaaatgccgaaattgttagaccggatgccat 10165586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 3820 - 3774
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  3820 aagtcttagctcaactggcaaaatgccgaaattgttaggccggatgc 3774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 4772299 - 4772357
Alignment:
Q  157 gtaattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  4772299 gtaatccataagtcatagctcaactggcaaaatgctgaaattgttaggccggatgccat 4772357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 20251608 - 20251559
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  20251608 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 20251559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 32023257 - 32023306
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  32023257 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 32023306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 38490523 - 38490474
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  38490523 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 38490474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 42133573 - 42133516
Alignment:
Q  158 taattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||||| ||||||||||    
T  42133573 taattcagaagtcttagttcaactggcaaaatgccgaaattgttaggtcggatgccat 42133516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 34481801 - 34481745
Alignment:
Q  159 aattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||| ||||| |||||||| |||| |||||||||||||||||||| |||||||||    
T  34481801 aattcagaagtcctagctcaactggcaaaatgccgaaattgttaggctggatgccat 34481745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 38463138 - 38463189
Alignment:
Q  160 attcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||| ||||||    
T  38463138 attcagaagtcttagctcaactggcaaaatgccgaaattgttaggtcggatg 38463189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 7975137 - 7975091
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  7975137 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgc 7975091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 36754864 - 36754818
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgc 211  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||||    
T  36754864 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgc 36754818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 12236146 - 12236175
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  12236146 aaatgccgaaattgttaggccggatgccat 12236175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 15897219 - 15897264
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  15897219 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 15897264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 23080221 - 23080176
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  23080221 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 23080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 33607048 - 33607097
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||||||||    
T  33607048 aagtcctagctcaactggcaaaatgccgaaattgttaggccagatgccat 33607097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 34667049 - 34667094
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  34667049 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 34667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 35476613 - 35476564
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  35476613 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 35476564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 35687889 - 35687860
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  35687889 aaatgccgaaattgttaggccggatgccat 35687860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 39070044 - 39070073
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  39070044 aaatgccgaaattgttaggccggatgccat 39070073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 40592318 - 40592367
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||||||||    
T  40592318 aagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccat 40592367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 42160380 - 42160335
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  42160380 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 42160335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 42414530 - 42414559
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  42414530 aaatgccgaaattgttaggccggatgccat 42414559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 45049390 - 45049435
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||    
T  45049390 aagtcttagctcaactggcaaaatgtcgaaattgttaggccggatg 45049435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 2287432 - 2287388
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggat 209  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||    
T  2287432 aagtcctagctcaactggcaaaatgccgaaattgttaggccggat 2287388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 3048544 - 3048596
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||| |||||||| | || ||||| ||||||||||||||||||||||||    
T  3048544 cataagtcctagctcaactagcaaaatgtcgaaattgttaggccggatgccat 3048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 9372 - 9421
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  9372 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 9421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 1364 - 1315
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  1364 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 1181 - 1132
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  1181 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccat 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 341 - 399
Alignment:
Q  157 gtaattcataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| || ||||| |||||||| |||| | ||||||||||||||||||||||||||||    
T  341 gtaatccaaaagtcctagctcaactggcaatatgccgaaattgttaggccggatgccat 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 95169 - 95203
Alignment:
Q  180 tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||| ||||||||||||||||||||||||||||||    
T  95169 tggcaaaatgccgaaattgttaggccggatgccat 95203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 823 - 872
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||| ||||||||||||||||||||||||    
T  823 aagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgccat 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 6784 - 6829
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  6784 aagtcctagctcaactggcaaaatgccgaaattgttaggccggatg 6829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 4138 - 4089
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    ||||| |||||||| |||| ||||||||||||||||| ||||||||||||    
T  4138 aagtcctagctcaactggcaaaatgccgaaattgttaagccggatgccat 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 8982 - 8937
Alignment:
Q  166 aagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatg 210  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  8982 aagtcatagctcaactggcaaaatgccgaaattgttaggccggatg 8937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Original strand, 160473 - 160502
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  160473 aaatgccgaaattgttaggccggatgccat 160502  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 39416 - 39387
Alignment:
Q  185 aaatgccgaaattgttaggccggatgccat 214  Q
    ||||||||||||||||||||||||||||||    
T  39416 aaatgccgaaattgttaggccggatgccat 39387  T

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Target: scaffold0163 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 27043 - 26991
Alignment:
Q  163 cataagtcttagctcaa-tggcgaaatgccgaaattgttaggccggatgccat 214  Q
    |||||||  |||||||| |||| |||||| |||||||||||||||||||||||    
T  27043 cataagttctagctcaactggcaaaatgcagaaattgttaggccggatgccat 26991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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