View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16635_low_8 (Length: 397)

Name: NF16635_low_8
Description: NF16635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16635_low_8
NF16635_low_8
[»] scaffold0328 (1 HSPs)
scaffold0328 (4-397)||(14668-15061)
[»] chr5 (49 HSPs)
chr5 (319-397)||(22392693-22392771)
chr5 (325-394)||(25586930-25586999)
chr5 (325-397)||(8484788-8484860)
chr5 (325-397)||(13038581-13038653)
chr5 (325-397)||(13108576-13108648)
chr5 (325-397)||(15641232-15641304)
chr5 (325-397)||(38631088-38631160)
chr5 (325-396)||(32059568-32059639)
chr5 (315-397)||(1827657-1827739)
chr5 (319-397)||(34310134-34310212)
chr5 (325-397)||(11926629-11926701)
chr5 (325-397)||(36954816-36954888)
chr5 (325-396)||(34049820-34049891)
chr5 (324-394)||(15971252-15971322)
chr5 (331-397)||(33709628-33709694)
chr5 (320-397)||(31288073-31288150)
chr5 (328-397)||(38684209-38684278)
chr5 (325-397)||(15931057-15931129)
chr5 (325-397)||(27498858-27498930)
chr5 (325-396)||(4603775-4603846)
chr5 (320-395)||(30485821-30485896)
chr5 (312-394)||(23270652-23270734)
chr5 (333-394)||(42193491-42193552)
chr5 (325-397)||(7085753-7085825)
chr5 (325-385)||(25750750-25750810)
chr5 (338-397)||(37495058-37495117)
chr5 (331-394)||(6014410-6014473)
chr5 (326-397)||(37397712-37397783)
chr5 (320-394)||(5067294-5067368)
chr5 (351-397)||(18207231-18207277)
chr5 (325-394)||(12317280-12317349)
chr5 (344-397)||(12398575-12398628)
chr5 (344-393)||(19456340-19456389)
chr5 (326-378)||(3715055-3715107)
chr5 (325-397)||(19145538-19145610)
chr5 (325-389)||(27487690-27487754)
chr5 (329-396)||(10869693-10869760)
chr5 (321-371)||(42006787-42006837)
chr5 (325-394)||(11465037-11465106)
chr5 (318-397)||(15485418-15485498)
chr5 (318-365)||(19230466-19230513)
chr5 (325-372)||(40330631-40330678)
chr5 (344-397)||(7151346-7151399)
chr5 (325-397)||(930612-930684)
chr5 (321-372)||(21042677-21042728)
chr5 (325-372)||(22253297-22253344)
chr5 (325-372)||(33025478-33025525)
chr5 (325-395)||(21236491-21236561)
chr5 (325-394)||(16616117-16616186)
[»] scaffold0623 (1 HSPs)
scaffold0623 (324-397)||(1183-1256)
[»] scaffold0366 (2 HSPs)
scaffold0366 (324-397)||(9426-9499)
scaffold0366 (324-394)||(12130-12200)
[»] chr7 (52 HSPs)
chr7 (320-397)||(7275274-7275351)
chr7 (325-397)||(2103057-2103129)
chr7 (325-397)||(7175989-7176061)
chr7 (325-397)||(21217960-21218032)
chr7 (325-397)||(22119890-22119962)
chr7 (325-397)||(40543037-40543109)
chr7 (320-395)||(23854393-23854468)
chr7 (320-397)||(13332550-13332627)
chr7 (325-397)||(2751273-2751345)
chr7 (325-397)||(7799959-7800031)
chr7 (325-397)||(10091190-10091262)
chr7 (325-397)||(18044109-18044181)
chr7 (320-395)||(17212050-17212125)
chr7 (326-397)||(27312155-27312226)
chr7 (319-393)||(25333415-25333489)
chr7 (320-397)||(11997846-11997923)
chr7 (325-397)||(21835153-21835225)
chr7 (325-393)||(27009361-27009429)
chr7 (325-393)||(28089818-28089886)
chr7 (325-396)||(2344301-2344372)
chr7 (332-394)||(42913643-42913705)
chr7 (325-394)||(19421233-19421302)
chr7 (340-397)||(22703503-22703560)
chr7 (320-397)||(32849588-32849665)
chr7 (325-397)||(21370599-21370671)
chr7 (337-397)||(22299863-22299923)
chr7 (323-397)||(23012635-23012709)
chr7 (325-395)||(31197593-31197663)
chr7 (325-387)||(31713032-31713094)
chr7 (325-397)||(17197077-17197149)
chr7 (321-371)||(577677-577727)
chr7 (324-389)||(28003837-28003902)
chr7 (320-397)||(43785426-43785503)
chr7 (325-397)||(39145779-39145851)
chr7 (326-397)||(42814867-42814938)
chr7 (324-394)||(27704003-27704073)
chr7 (317-394)||(1469106-1469183)
chr7 (320-397)||(22638289-22638366)
chr7 (325-394)||(40332101-40332170)
chr7 (325-397)||(9718114-9718186)
chr7 (325-397)||(21574230-21574302)
chr7 (321-397)||(22696318-22696394)
chr7 (325-372)||(8435847-8435894)
chr7 (325-372)||(12211687-12211734)
chr7 (326-397)||(28646972-28647043)
chr7 (350-397)||(31273941-31273988)
chr7 (325-387)||(9683828-9683890)
chr7 (351-397)||(14199793-14199839)
chr7 (332-397)||(28950877-28950945)
chr7 (325-397)||(23330866-23330938)
chr7 (322-372)||(3951142-3951193)
chr7 (319-397)||(22264629-22264707)
[»] chr1 (46 HSPs)
chr1 (320-397)||(7197373-7197450)
chr1 (325-397)||(4621364-4621436)
chr1 (325-397)||(7766854-7766926)
chr1 (325-397)||(24674391-24674463)
chr1 (318-397)||(34778333-34778412)
chr1 (325-395)||(8077645-8077715)
chr1 (319-395)||(15059531-15059607)
chr1 (321-397)||(24122017-24122093)
chr1 (326-397)||(46113529-46113600)
chr1 (325-395)||(27454995-27455065)
chr1 (320-397)||(46607803-46607880)
chr1 (325-397)||(29057464-29057536)
chr1 (319-397)||(14258554-14258632)
chr1 (320-397)||(2272337-2272414)
chr1 (337-397)||(7578419-7578479)
chr1 (325-397)||(20487317-20487389)
chr1 (319-397)||(30677168-30677246)
chr1 (335-396)||(17935777-17935838)
chr1 (326-395)||(18646852-18646921)
chr1 (320-397)||(32729538-32729615)
chr1 (344-397)||(33905637-33905690)
chr1 (325-397)||(168199-168271)
chr1 (325-397)||(1818732-1818804)
chr1 (325-397)||(7946842-7946914)
chr1 (325-397)||(23232392-23232464)
chr1 (325-397)||(23734114-23734186)
chr1 (325-397)||(23741306-23741378)
chr1 (319-394)||(1378737-1378812)
chr1 (325-397)||(21726727-21726799)
chr1 (349-397)||(45859170-45859218)
chr1 (325-372)||(47091688-47091735)
chr1 (349-395)||(9500484-9500530)
chr1 (351-397)||(36156015-36156061)
chr1 (342-396)||(37351589-37351643)
chr1 (325-394)||(24216976-24217045)
chr1 (333-397)||(25237116-25237180)
chr1 (326-397)||(25496615-25496686)
chr1 (327-394)||(32930749-32930816)
chr1 (332-394)||(1378903-1378965)
chr1 (325-371)||(52135128-52135174)
chr1 (320-365)||(1095154-1095199)
chr1 (325-397)||(1486418-1486488)
chr1 (331-372)||(6776148-6776189)
chr1 (325-372)||(1138577-1138624)
chr1 (351-394)||(8779866-8779909)
chr1 (325-395)||(18533853-18533923)
[»] chr8 (39 HSPs)
chr8 (325-397)||(18532109-18532181)
chr8 (325-397)||(34237782-34237854)
chr8 (326-397)||(28193477-28193548)
chr8 (320-397)||(39349253-39349330)
chr8 (325-397)||(3734750-3734822)
chr8 (325-397)||(4718647-4718719)
chr8 (325-397)||(19471611-19471683)
chr8 (325-397)||(19542535-19542607)
chr8 (325-397)||(19590089-19590161)
chr8 (325-397)||(2618188-2618260)
chr8 (325-397)||(27746462-27746534)
chr8 (325-397)||(42643245-42643317)
chr8 (325-394)||(7558073-7558142)
chr8 (325-397)||(15259533-15259605)
chr8 (326-397)||(264526-264597)
chr8 (326-397)||(651324-651395)
chr8 (326-397)||(837059-837130)
chr8 (325-396)||(20305910-20305981)
chr8 (325-396)||(21092543-21092614)
chr8 (334-397)||(21603241-21603304)
chr8 (320-397)||(32879276-32879353)
chr8 (325-397)||(42328007-42328078)
chr8 (344-397)||(14632975-14633028)
chr8 (325-393)||(8042656-8042724)
chr8 (349-397)||(20469943-20469991)
chr8 (325-396)||(26168976-26169047)
chr8 (331-397)||(4698850-4698916)
chr8 (349-397)||(8765653-8765701)
chr8 (326-394)||(24018385-24018453)
chr8 (329-397)||(28088292-28088360)
chr8 (325-397)||(2166699-2166773)
chr8 (325-396)||(34694704-34694775)
chr8 (332-397)||(15974915-15974979)
chr8 (325-394)||(21667552-21667621)
chr8 (325-393)||(34639337-34639405)
chr8 (329-397)||(41070767-41070835)
chr8 (321-363)||(13580064-13580106)
chr8 (325-370)||(8387598-8387643)
chr8 (320-364)||(25248361-25248405)
[»] chr6 (28 HSPs)
chr6 (325-397)||(9238973-9239045)
chr6 (320-397)||(12591630-12591707)
chr6 (327-395)||(11448871-11448939)
chr6 (325-397)||(15360225-15360297)
chr6 (325-397)||(22576065-22576137)
chr6 (325-397)||(21982447-21982519)
chr6 (325-397)||(34147344-34147416)
chr6 (325-397)||(34159960-34160032)
chr6 (325-395)||(13753238-13753308)
chr6 (320-397)||(654273-654350)
chr6 (325-397)||(3222762-3222833)
chr6 (321-397)||(14212886-14212962)
chr6 (325-392)||(9843936-9844003)
chr6 (325-395)||(11007163-11007233)
chr6 (325-397)||(5360198-5360270)
chr6 (325-397)||(28672065-28672137)
chr6 (325-397)||(1344935-1345005)
chr6 (325-397)||(21148637-21148709)
chr6 (325-390)||(33499472-33499537)
chr6 (325-397)||(9208250-9208322)
chr6 (320-395)||(33718587-33718662)
chr6 (325-397)||(17081181-17081253)
chr6 (325-372)||(8479310-8479357)
chr6 (344-395)||(28968171-28968222)
chr6 (335-397)||(11840909-11840971)
chr6 (350-396)||(17706435-17706481)
chr6 (329-394)||(9690768-9690833)
chr6 (320-397)||(31039013-31039090)
[»] chr3 (51 HSPs)
chr3 (317-397)||(25289841-25289921)
chr3 (325-397)||(30807280-30807352)
chr3 (325-397)||(35492909-35492981)
chr3 (325-397)||(45529881-45529953)
chr3 (325-397)||(46576346-46576418)
chr3 (325-397)||(53424303-53424375)
chr3 (319-397)||(8456277-8456355)
chr3 (326-396)||(25379760-25379830)
chr3 (320-397)||(34492702-34492779)
chr3 (325-397)||(21362941-21363013)
chr3 (325-397)||(30257622-30257694)
chr3 (325-397)||(40940823-40940895)
chr3 (325-397)||(52455776-52455848)
chr3 (325-397)||(40133576-40133648)
chr3 (325-397)||(49258389-49258461)
chr3 (334-397)||(26108299-26108362)
chr3 (325-396)||(48977386-48977457)
chr3 (326-397)||(52821762-52821833)
chr3 (331-397)||(15566626-15566692)
chr3 (328-394)||(26174114-26174180)
chr3 (319-397)||(31537965-31538043)
chr3 (325-397)||(7485652-7485724)
chr3 (325-397)||(45272543-45272615)
chr3 (325-397)||(7470342-7470414)
chr3 (325-397)||(18177014-18177086)
chr3 (325-397)||(25344184-25344256)
chr3 (334-397)||(9853623-9853686)
chr3 (325-394)||(29915399-29915468)
chr3 (325-394)||(29964552-29964621)
chr3 (321-397)||(4462627-4462703)
chr3 (339-395)||(53234039-53234095)
chr3 (325-397)||(55287801-55287873)
chr3 (319-397)||(9842913-9842990)
chr3 (331-397)||(19857056-19857121)
chr3 (325-394)||(50582990-50583059)
chr3 (348-395)||(39041981-39042028)
chr3 (344-397)||(10083946-10083999)
chr3 (344-397)||(10190869-10190922)
chr3 (356-396)||(1692863-1692903)
chr3 (325-397)||(4252523-4252595)
chr3 (331-395)||(32151428-32151492)
chr3 (325-372)||(16140295-16140342)
chr3 (320-395)||(38732959-38733034)
chr3 (325-395)||(36660768-36660838)
chr3 (319-396)||(25017508-25017584)
chr3 (326-394)||(11390601-11390669)
chr3 (333-397)||(53288839-53288903)
chr3 (318-372)||(6041824-6041878)
chr3 (341-395)||(49167070-49167124)
chr3 (334-394)||(14343418-14343478)
chr3 (321-389)||(26158812-26158880)
[»] scaffold0459 (1 HSPs)
scaffold0459 (324-394)||(10823-10893)
[»] scaffold0199 (1 HSPs)
scaffold0199 (325-394)||(8537-8606)
[»] chr4 (38 HSPs)
chr4 (320-397)||(1985829-1985906)
chr4 (320-397)||(32986190-32986267)
chr4 (325-394)||(46714390-46714459)
chr4 (317-397)||(22625197-22625277)
chr4 (325-397)||(25852212-25852284)
chr4 (325-397)||(52983617-52983689)
chr4 (325-395)||(34844887-34844957)
chr4 (325-395)||(40058981-40059051)
chr4 (319-397)||(51535605-51535683)
chr4 (331-396)||(35229172-35229237)
chr4 (320-397)||(54127469-54127546)
chr4 (325-397)||(13873422-13873494)
chr4 (329-397)||(27528922-27528990)
chr4 (325-397)||(33696406-33696478)
chr4 (325-395)||(19660661-19660731)
chr4 (319-397)||(45787831-45787908)
chr4 (325-397)||(20566347-20566420)
chr4 (320-395)||(5609331-5609406)
chr4 (318-397)||(42245737-42245816)
chr4 (313-395)||(33992612-33992694)
chr4 (320-397)||(35674868-35674945)
chr4 (334-397)||(2351020-2351083)
chr4 (324-395)||(43719194-43719265)
chr4 (325-397)||(36131637-36131709)
chr4 (326-397)||(44343512-44343584)
chr4 (327-383)||(55961883-55961939)
chr4 (323-397)||(34835525-34835599)
chr4 (341-395)||(49287872-49287926)
chr4 (344-397)||(7392090-7392143)
chr4 (326-395)||(32942369-32942438)
chr4 (326-379)||(34722169-34722222)
chr4 (349-397)||(20078111-20078159)
chr4 (325-397)||(13584381-13584453)
chr4 (325-372)||(41621748-41621795)
chr4 (325-387)||(13550206-13550268)
chr4 (351-397)||(12500185-12500231)
chr4 (328-368)||(10125783-10125823)
chr4 (337-397)||(12710189-12710249)
[»] chr2 (37 HSPs)
chr2 (320-397)||(17324759-17324836)
chr2 (320-397)||(33827700-33827777)
chr2 (320-397)||(44946180-44946257)
chr2 (324-397)||(44976281-44976354)
chr2 (325-397)||(18976552-18976624)
chr2 (325-397)||(11941337-11941409)
chr2 (320-397)||(15037952-15038029)
chr2 (321-397)||(4852552-4852628)
chr2 (337-397)||(27290598-27290658)
chr2 (325-397)||(32845089-32845161)
chr2 (325-397)||(41313990-41314062)
chr2 (340-397)||(10582117-10582174)
chr2 (325-397)||(8192478-8192550)
chr2 (325-397)||(24196002-24196074)
chr2 (325-397)||(25293164-25293236)
chr2 (325-396)||(6714409-6714480)
chr2 (326-397)||(41329842-41329913)
chr2 (325-395)||(30466959-30467029)
chr2 (325-394)||(4567567-4567636)
chr2 (326-397)||(8258896-8258967)
chr2 (344-397)||(43374452-43374505)
chr2 (343-395)||(34516537-34516589)
chr2 (325-396)||(19054023-19054094)
chr2 (325-394)||(36390698-36390765)
chr2 (344-397)||(1191530-1191583)
chr2 (344-397)||(5394034-5394087)
chr2 (344-397)||(36242439-36242492)
chr2 (325-397)||(27269477-27269549)
chr2 (325-397)||(40997477-40997549)
chr2 (358-397)||(35171831-35171870)
chr2 (331-397)||(19605972-19606038)
chr2 (329-394)||(4618815-4618880)
chr2 (320-397)||(18691975-18692052)
chr2 (324-372)||(918851-918899)
chr2 (325-397)||(32526212-32526284)
chr2 (343-393)||(44610090-44610140)
chr2 (344-397)||(45271401-45271454)
[»] scaffold0576 (1 HSPs)
scaffold0576 (325-397)||(5209-5281)
[»] scaffold0068 (1 HSPs)
scaffold0068 (325-397)||(41771-41843)
[»] scaffold0070 (1 HSPs)
scaffold0070 (325-397)||(40323-40395)
[»] scaffold0026 (1 HSPs)
scaffold0026 (325-397)||(97493-97565)
[»] scaffold0217 (1 HSPs)
scaffold0217 (326-397)||(7436-7507)
[»] scaffold0051 (1 HSPs)
scaffold0051 (325-397)||(52998-53070)
[»] scaffold0717 (1 HSPs)
scaffold0717 (332-397)||(85-150)
[»] scaffold0460 (1 HSPs)
scaffold0460 (325-397)||(8306-8378)
[»] scaffold0049 (1 HSPs)
scaffold0049 (320-396)||(66755-66831)
[»] scaffold0240 (1 HSPs)
scaffold0240 (326-394)||(12884-12952)
[»] scaffold0019 (1 HSPs)
scaffold0019 (349-397)||(161831-161879)
[»] scaffold0028 (1 HSPs)
scaffold0028 (325-397)||(27774-27846)
[»] scaffold0200 (1 HSPs)
scaffold0200 (320-395)||(26672-26747)
[»] scaffold0157 (1 HSPs)
scaffold0157 (351-397)||(20246-20292)


Alignment Details
Target: scaffold0328 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 14668 - 15061
Alignment:
Q  4 atgaatagaatctggatcctcatatacatctatcaatttgcttaatatgaggaaatacggatttaggttctatatataatgcaagtcgtcgaacaattta 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14668 atgaatagaatctggatcctcatatacatctatcaatttgcttaatatgaggaaatacggatttaggttctatatataatgcaagtcgtcgaacaattta 14767  T
Q  104 atttgtgaaattaatgaaattttcaagtgatcttgaaaaataaaaattctctttcagctactacaatgtgatcaagaaattaaaaattttattaatttga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14768 atttgtgaaattaatgaaattttcaagtgatcttgaaaaataaaaattctctttcagctactacaatgtgatcaagaaatttaaaattttattaatttga 14867  T
Q  204 agaccaaaatattgttccctctttacaattctatggactaaaatgataaaggtgtttgtgtgcttagtggtaaaagttagattgtgtagaagagtatgat 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14868 agaccaaaatattgttccctctttacaattctatggactaaaatgataaaggtgtttgtgtgcttagtgataaaagttagattgtgtagaagagtatgat 14967  T
Q  304 tagatgacaatattataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  14968 taaatgacaatattataaacccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccc 15061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 22392693 - 22392771
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22392693 taaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22392771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 25586930 - 25586999
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  25586930 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 8484860 - 8484788
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  8484860 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 8484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 13038653 - 13038581
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  13038653 catttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 13038581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 13108648 - 13108576
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  13108648 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 13108576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 15641304 - 15641232
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15641304 catttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 15641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 38631160 - 38631088
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  38631160 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccc 38631088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 32059639 - 32059568
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  32059639 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 32059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 1827739 - 1827657
Alignment:
Q  315 attataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  1827739 attattaacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 1827657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 34310134 - 34310212
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  34310134 taaacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccc 34310212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 11926701 - 11926629
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||    
T  11926701 catttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccc 11926629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 36954816 - 36954888
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  36954816 catttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 36954888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 34049820 - 34049891
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34049820 catttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 394
Target Start/End: Complemental strand, 15971322 - 15971252
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  15971322 tcatttagggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 33709694 - 33709628
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccc 33709628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 31288150 - 31288073
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  31288150 aaacccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccc 31288073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 38684209 - 38684278
Alignment:
Q  328 ttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38684209 ttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 38684278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 15931057 - 15931129
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  || | ||||||||||||||||||    
T  15931057 catttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccc 15931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 27498930 - 27498858
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  27498930 catttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccc 27498858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 4603775 - 4603846
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| || ||||| ||||||||||    
T  4603775 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattcc 4603846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 30485821 - 30485896
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| ||||||||||||||| || |||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  30485821 aaacccatttggggttggcccagcggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 30485896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 312 - 394
Target Start/End: Complemental strand, 23270734 - 23270652
Alignment:
Q  312 aatattataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||| ||||||||    
T  23270734 aatataatcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 42193491 - 42193552
Alignment:
Q  333 gttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatt 42193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7085825 - 7085753
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  7085825 catttggggctggcttagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccc 7085753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 25750810 - 25750750
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctca 385  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  25750810 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 37495058 - 37495117
Alignment:
Q  338 cctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  37495058 cctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 37495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 6014473 - 6014410
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||| || |||||||||||||||||||||| | |||||| ||||||||||||||    
T  6014473 gggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 37397712 - 37397783
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||| ||| |||||| ||||| |||||||    
T  37397712 atttggggttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccc 37397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 320 - 394
Target Start/End: Original strand, 5067294 - 5067368
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||| ||||||| ||||| |||||||||  ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  5067294 aaacccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 18207231 - 18207277
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  18207231 ttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 18207277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 12317349 - 12317280
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||| |  |||||||| |||| ||||    
T  12317349 catttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatt 12317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 12398628 - 12398575
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 19456389 - 19456340
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 3715107 - 3715055
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccaga 378  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  3715107 atttggggttggcctagtggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 19145610 - 19145538
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||| |   ||||||| ||||||||||||    
T  19145610 catttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccc 19145538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 27487754 - 27487690
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggtt 389  Q
    |||||||||||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||    
T  27487754 catttggggttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtt 27487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 10869760 - 10869693
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||||||| | ||||||  |||| |||||||||||||||||| ||| |||||||||||||||||||    
T  10869760 tggggttggcatggtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattcc 10869693  T

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Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 42006787 - 42006837
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctc 371  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  42006787 aactcatttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 11465106 - 11465037
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||| |||||||||||||| || |||||  ||||||||||||||||| ||| | |||||||||||||||    
T  11465106 catttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatt 11465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 15485498 - 15485418
Alignment:
Q  318 ataaactcatttggggttggcctagtgg-ttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||||||||||| || || |||||||| |||||||| |||||| |   ||||||||||||||||||||    
T  15485498 ataaacccatttggggttggcctagcgggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 19230466 - 19230513
Alignment:
Q  318 ataaactcatttggggttggcctagtggttagcttgggatcttggagt 365  Q
    |||||| || |||||||||||||||||||||| |||||||||||||||    
T  19230466 ataaacccaattggggttggcctagtggttagtttgggatcttggagt 19230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 40330631 - 40330678
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  40330631 catttgaggttggcttagtggttagcttgagatcttggagtttgctcc 40330678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 7151346 - 7151399
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| | |||||||| |||||||| ||||    
T  7151346 ggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccc 7151399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 930684 - 930612
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||| ||||||| ||||| ||| || ||||||||||| |   | ||||||||||||||||||    
T  930684 catttggggttggcccagtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattccc 930612  T

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Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 372
Target Start/End: Complemental strand, 21042728 - 21042677
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||||||||||||||  ||||| || | ||||||||||||||||||||||    
T  21042728 aactcatttggggttggtttagtgattggtttgggatcttggagtttgctcc 21042677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 22253344 - 22253297
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||| ||||||||| |||||||||||| || ||||||||    
T  22253344 catttggggttggtctagtggttggcttgggatctttgactttgctcc 22253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 33025478 - 33025525
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||||||||||||| | |||| ||||||||||||||||| ||||||    
T  33025478 catttggggttggcctcgcggttggcttgggatcttggagtgtgctcc 33025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 21236561 - 21236491
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||| |||||||| |||| ||| |||| |||||||||||||| ||||  |||||||||  ||||||||||    
T  21236561 catttagggttggcttagtagttcgcttaggatcttggagttttctccttcagaggtcttcggttcgattc 21236491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 16616117 - 16616186
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||| | ||||| |||| ||| |||||||||||||||||||||||| | | || |||||| |||||||    
T  16616117 catttgagattggcttagtagttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

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Target: scaffold0623 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 1256 - 1183
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1256 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 1183  T

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Target: scaffold0366 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 9499 - 9426
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9499 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 9426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 394
Target Start/End: Complemental strand, 12200 - 12130
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12200 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

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Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 7275274 - 7275351
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7275274 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7275351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 2103057 - 2103129
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2103057 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 2103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7176061 - 7175989
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7176061 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7175989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 21218032 - 21217960
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21218032 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 21217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 22119890 - 22119962
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 40543109 - 40543037
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40543109 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 40543037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 23854393 - 23854468
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23854393 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 13332627 - 13332550
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||    
T  13332627 aaactcatttggggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccc 13332550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 2751273 - 2751345
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  2751273 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 2751345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7800031 - 7799959
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7800031 catttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7799959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 10091190 - 10091262
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10091190 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 10091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 18044109 - 18044181
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  18044109 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccc 18044181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 17212050 - 17212125
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  17212050 aaacccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 17212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 27312155 - 27312226
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||    
T  27312155 atttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccc 27312226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 393
Target Start/End: Original strand, 25333415 - 25333489
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  25333415 taaacccatttggggttggcttagtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 11997846 - 11997923
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||| |||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11997846 aaacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 11997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 21835153 - 21835225
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  21835153 catttagggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 21835225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 27009361 - 27009429
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||    
T  27009361 catttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgat 27009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 28089818 - 28089886
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||    
T  28089818 catttggggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgat 28089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 2344301 - 2344372
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||| |||||||||    
T  2344301 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattcc 2344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 42913705 - 42913643
Alignment:
Q  332 ggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 19421233 - 19421302
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  19421233 catttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 397
Target Start/End: Original strand, 22703503 - 22703560
Alignment:
Q  340 tagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 32849588 - 32849665
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  32849588 aaacccatttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccc 32849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 21370599 - 21370671
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  21370599 catttggggttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccc 21370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 22299863 - 22299923
Alignment:
Q  337 gcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  22299863 gcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccc 22299923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 397
Target Start/End: Complemental strand, 23012709 - 23012635
Alignment:
Q  323 ctcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| | |||||||||| ||||| |||||||    
T  23012709 ctcatttagggttggcccagtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccc 23012635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 31197593 - 31197663
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||  ||||| |||||||||| |||||    
T  31197593 catttggggttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 31713094 - 31713032
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcagg 387  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||||||    
T  31713094 catttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 17197149 - 17197077
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| |||||||||||| | ||| |||||||||||||||||| ||| |||||||| |||||||||||    
T  17197149 catttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccc 17197077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 577677 - 577727
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctc 371  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  577677 aactcatttggggttggcctagtggtttgcttgggatcttagagtttgctc 577727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 28003837 - 28003902
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggtt 389  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||| ||||| |||| |||||    
T  28003837 tcatttggggttgatctagtggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 43785503 - 43785426
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||| |||| ||||| |||||||||||| ||| ||||||| ||| |||||||| |||||||||||    
T  43785503 aaacccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattccc 43785426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 39145851 - 39145779
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||| ||||||||||  ||||||||||||||||||||||| ||||| ||||  ||||||||||||    
T  39145851 catttgaggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccc 39145779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 42814867 - 42814938
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||| ||||||||  ||||||||||||||||||||||| |  || ||||||||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccc 42814938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 394
Target Start/End: Original strand, 27704003 - 27704073
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||| ||||| | ||||||| ||||| ||||||| ||||||||||  ||||||||||||||||||||    
T  27704003 tcatttggagttggtccagtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatt 27704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 394
Target Start/End: Original strand, 1469106 - 1469183
Alignment:
Q  317 tataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||||||||||||||||||  ||||  ||||||||||||| ||  |   |||||||||||||||||    
T  1469106 tataaactcatttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatt 1469183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 22638289 - 22638366
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||| |||||||||  |||| |||||| ||||||||||   || ||||||||||||||||||||    
T  22638289 aaacccatttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccc 22638366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 40332101 - 40332170
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||| ||||| ||||||||| |||||  ||||||||||||||||| | | |||||||||||||||||    
T  40332101 catttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 9718186 - 9718114
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||||||||| || || ||| |||||||||||||| ||| | |||||| |||||||||||    
T  9718186 catttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccc 9718114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 21574302 - 21574230
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | ||||||| ||||||| |||||| |   ||||| ||||||||||||||    
T  21574302 catttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattccc 21574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 22696318 - 22696394
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||| ||||||||||||||||||   ||||||||||||||| |||||| |   |||||||||||| |||||||    
T  22696318 aactcattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccc 22696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 8435894 - 8435847
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||||    
T  8435894 catttggggttggtctagtggttgacttgggatcttggagtttgctcc 8435847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 12211734 - 12211687
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||    
T  12211734 catttggggttggcctagtggttggcttaggatcttggagtgtgctcc 12211687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 28646972 - 28647043
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||| | |   ||||||||||||||||||||    
T  28646972 atttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccc 28647043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 397
Target Start/End: Original strand, 31273941 - 31273988
Alignment:
Q  350 cttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  31273941 cttgggatcttggagtttgctcctccagagctctcaagttcgattccc 31273988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 9683828 - 9683890
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcagg 387  Q
    |||||| ||||||||||||||||  |||| ||||| |||||||||||| | ||||||||||||    
T  9683828 catttgcggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcagg 9683890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 14199839 - 14199793
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||    
T  14199839 ttggaatcttggagtttcctcctccagaggtctcaggttcgattccc 14199793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 28950877 - 28950945
Alignment:
Q  332 ggttggcctagtggttagcttgggatcttgg---agtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||| ||||||| ||||||   ||||||||||  |||||||||||||||||| ||||    
T  28950877 ggttggcctagtggttggcttggggtcttggagtagtttgctccttcagaggtctcaggttcgactccc 28950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 23330938 - 23330866
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| ||||||||||| ||||||||| || |||| |||||| |   ||||||||||||||| ||||    
T  23330938 catttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccc 23330866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 372
Target Start/End: Complemental strand, 3951193 - 3951142
Alignment:
Q  322 actcatttggggttggcctagtggttagctt-gggatcttggagtttgctcc 372  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  3951193 actcatttggggttggtctagtggttggcttggggatcttggagtgtgctcc 3951142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 22264707 - 22264629
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||| |  |||| | |||| ||||||||||||||||| |   ||||||||| ||||||||||    
T  22264707 taaacccatttggggttggccgaagggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccc 22264629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 7197450 - 7197373
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7197450 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7197373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 4621436 - 4621364
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4621436 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 4621364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7766926 - 7766854
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7766926 cattcggggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7766854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 24674391 - 24674463
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24674391 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 24674463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 34778333 - 34778412
Alignment:
Q  318 ataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  34778333 ataaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 34778412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 8077645 - 8077715
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8077645 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 8077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 319 - 395
Target Start/End: Complemental strand, 15059607 - 15059531
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15059607 taaacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattc 15059531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 24122017 - 24122093
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24122017 aactcatttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccc 24122093  T

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Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 46113600 - 46113529
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 46113529  T

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Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 27455065 - 27454995
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  27455065 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27454995  T

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Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 46607803 - 46607880
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  46607803 aaacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 46607880  T

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Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 29057536 - 29057464
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  29057536 catttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccc 29057464  T

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Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 14258632 - 14258554
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||| ||| ||||| ||||| ||||||||||||    
T  14258632 taaacccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccc 14258554  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 2272337 - 2272414
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||| |||||||    
T  2272337 aaacacatttggggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccc 2272414  T

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Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 7578419 - 7578479
Alignment:
Q  337 gcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7578419 gcctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccc 7578479  T

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Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 20487389 - 20487317
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  20487389 catttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccc 20487317  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 30677168 - 30677246
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| |||||||||||| |||||||||| | ||||||||| |||||||||||| ||| |||||||||||| |||||||    
T  30677168 taaacccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccc 30677246  T

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Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 396
Target Start/End: Original strand, 17935777 - 17935838
Alignment:
Q  335 tggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  17935777 tggcatagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 17935838  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 18646852 - 18646921
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||| |||||||||| ||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  18646852 atttggggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattc 18646921  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 32729538 - 32729615
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |   | ||||||||||||||||||    
T  32729538 aaacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccc 32729615  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 33905690 - 33905637
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 33905637  T

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Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 168199 - 168271
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||   || ||||||||||||||||||||    
T  168199 catttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccc 168271  T

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Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 1818732 - 1818804
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||| || ||| |||| ||||||||||||||||||  |||||||| |||||||||||||||    
T  1818732 catttggggttggcctggtagttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattccc 1818804  T

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Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 7946842 - 7946914
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| | |||||||||| ||||| ||||||| |||||||||| |||||||||||| |||||||||||    
T  7946842 catttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccc 7946914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 23232464 - 23232392
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||| ||||||||||||||  |||||||||||| |||||||||  |||||||| |||||||||||||||    
T  23232464 catttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccc 23232392  T

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Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 23734114 - 23734186
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||  |||| ||| |||||||||||| || |||||||| ||||||||||||||||||||||||    
T  23734114 catttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccc 23734186  T

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Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 23741306 - 23741378
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||  |||| ||| |||||||||||| || |||||||| ||||||||||||||||||||||||    
T  23741306 catttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccc 23741378  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 394
Target Start/End: Original strand, 1378737 - 1378812
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||| |||| ||| |||||||| ||||||||    
T  1378737 taaactcatttggggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgatt 1378812  T

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Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 21726727 - 21726799
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||| ||||||||||   ||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  21726727 catttgaggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccc 21726799  T

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Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 45859218 - 45859170
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  45859218 gcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 45859170  T

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Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 47091688 - 47091735
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  47091688 catttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 349 - 395
Target Start/End: Complemental strand, 9500530 - 9500484
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||    
T  9500530 gcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 9500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 36156061 - 36156015
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  36156061 ttgggatcttggagtttgctcctccagaggtgtcaggttcgattccc 36156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 342 - 396
Target Start/End: Complemental strand, 37351643 - 37351589
Alignment:
Q  342 gtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||| |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattcc 37351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 24216976 - 24217045
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||| ||||||||||  |||||||||||||||| |||||| |   |||||||||||||||||    
T  24216976 catttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 25237180 - 25237116
Alignment:
Q  333 gttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||| ||||||| |||||||||||||||||||| | |   ||||||||||||||||||||    
T  25237180 gttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccc 25237116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 25496686 - 25496615
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||||| || |||||||||||||||| ||||||| |   |||||||| |||||||||||    
T  25496686 atttggcgttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccc 25496615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 32930749 - 32930816
Alignment:
Q  327 tttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||| |||||||||| | |||| |||||||||||| ||||  ||||||||||| ||||||||    
T  32930749 tttggggttgacctagtggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatt 32930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 1378903 - 1378965
Alignment:
Q  332 ggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||| | |||||| ||||||||    
T  1378903 ggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatt 1378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 371
Target Start/End: Original strand, 52135128 - 52135174
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctc 371  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||    
T  52135128 catttggggttggtctagtggttgacttgggatcttggagtttgctc 52135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 365
Target Start/End: Complemental strand, 1095199 - 1095154
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagt 365  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||    
T  1095199 aaacttatttggggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 1486418 - 1486488
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| |||||||||| ||||||||||||||||  |||| | |   ||||||||||||||||||||    
T  1486418 catttggggttgacctagtggttggcttgggatcttggag--tgctactctcaaggtctcaggttcgattccc 1486488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 6776148 - 6776189
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  6776148 gggttggcctagtggttggtttgggatcttggagtttgctcc 6776189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 1138577 - 1138624
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||||||||| |||||||||| ||||| ||||||||||| ||||||    
T  1138577 catttggggttgacctagtggttggcttgagatcttggagtgtgctcc 1138624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 394
Target Start/End: Complemental strand, 8779909 - 8779866
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||||||| | ||||||||||||| |||||||    
T  8779909 ttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 18533923 - 18533853
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||||||||| | ||||||||  |||| |||||| ||||||||||| |||||||| |||| || |||||    
T  18533923 catttggggttgacatagtggttgacttgagatcttagagtttgctcctccagaggtatcagatttgattc 18533853  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 18532109 - 18532181
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18532109 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 18532181  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 34237854 - 34237782
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34237854 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 34237782  T

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Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 28193477 - 28193548
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28193477 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 28193548  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 39349253 - 39349330
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39349253 aaacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 39349330  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 3734822 - 3734750
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3734822 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 3734750  T

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Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 4718647 - 4718719
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  4718647 catttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 4718719  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 19471611 - 19471683
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19471611 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19471683  T

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Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 19542535 - 19542607
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19542535 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19542607  T

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Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 19590161 - 19590089
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19590161 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19590089  T

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Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 2618188 - 2618260
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  2618188 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccc 2618260  T

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Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 27746534 - 27746462
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27746534 catttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 27746462  T

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Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 42643317 - 42643245
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  42643317 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccc 42643245  T

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Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 7558142 - 7558073
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  7558142 catttggggttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatt 7558073  T

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Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 15259605 - 15259533
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||| ||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  15259605 catttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccc 15259533  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 264597 - 264526
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 264526  T

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Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 651324 - 651395
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 651395  T

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Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 837059 - 837130
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 837130  T

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Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 20305910 - 20305981
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||| |||||||||    
T  20305910 catttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 20305981  T

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Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 21092543 - 21092614
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||| |||||||||    
T  21092543 catttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 21092614  T

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Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 21603241 - 21603304
Alignment:
Q  334 ttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccc 21603304  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 32879276 - 32879353
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||| |||||||||  ||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  32879276 aaacccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccc 32879353  T

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Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 42328007 - 42328078
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| ||||||| |||||||    
T  42328007 catttggggttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccc 42328078  T

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Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 14632975 - 14633028
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 14633028  T

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Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 8042656 - 8042724
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    |||||||||||| ||||||| || |||||||||||||||||||||||| ||| | ||||||||||||||    
T  8042656 catttggggttgacctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

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Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 20469943 - 20469991
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20469943 gcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 20469991  T

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Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 26169047 - 26168976
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| |   |||||||||||| ||||||    
T  26169047 catttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcc 26168976  T

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Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 4698916 - 4698850
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||| || |||| | ||||||||||||||||||||||  |||||||||||||||||||||||    
T  4698916 gggttggcccagcggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 4698850  T

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Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 8765701 - 8765653
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8765701 gcttgagatcttggagtttgctcccccagagatctcaggttcgattccc 8765653  T

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Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 24018385 - 24018453
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||  |||||||||  ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  24018385 atttggggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

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Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 28088292 - 28088360
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| ||||||||  ||||||||||||||||||| ||  ||||||||||||| ||||||||||    
T  28088292 tggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccc 28088360  T

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Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 2166699 - 2166773
Alignment:
Q  325 catttggggttggcctagtg--gttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||| ||||  ||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  2166699 catttggggttggcccagtgcagttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattccc 2166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 34694775 - 34694704
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||| |||||||||  |||| |||||||||||||||||| |   |||||| ||||||||||||    
T  34694775 catttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattcc 34694704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 397
Target Start/End: Original strand, 15974915 - 15974979
Alignment:
Q  332 ggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||| |||||||||||||||| |||||| |   |||||||| |||||||||||    
T  15974915 ggttggcctagtggtta-cttgggatcttggagtatgctcctctcaaggtctcaagttcgattccc 15974979  T

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Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 21667552 - 21667621
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||| |||||| ||||||||| |||||| ||||||||| ||||||| ||| || | ||||||||||||    
T  21667552 catttgaggttggtctagtggttggcttggaatcttggaggttgctcctccaaagatttcaggttcgatt 21667621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 34639405 - 34639337
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    ||||||||||| | ||||||||| ||||||||||||||||| |||||| |   |||||||||| |||||    
T  34639405 catttggggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcgat 34639337  T

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Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 41070767 - 41070835
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||  |||||||||||||||| |||| | |   |||||||| |||||||||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccc 41070835  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 13580106 - 13580064
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttgga 363  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||    
T  13580106 aactcatttggggttggtctagtagttaggttgggatcttgga 13580064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 370
Target Start/End: Complemental strand, 8387643 - 8387598
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgct 370  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||    
T  8387643 catttggggttggcctagtggttgtcttgagatcttagagtttgct 8387598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 25248361 - 25248405
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggag 364  Q
    ||||||||||| |||||  ||||||||| ||||||||||||||||    
T  25248361 aaactcatttgaggttgatctagtggttggcttgggatcttggag 25248405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 9238973 - 9239045
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9238973 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 9239045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 12591630 - 12591707
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12591630 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12591707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 11448871 - 11448939
Alignment:
Q  327 tttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 11448939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 15360297 - 15360225
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  15360297 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 15360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 22576065 - 22576137
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  22576065 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccc 22576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 21982519 - 21982447
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  21982519 catttggggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattccc 21982447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 34147344 - 34147416
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  34147344 catttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccc 34147416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 34159960 - 34160032
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  34159960 catttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccc 34160032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 13753238 - 13753308
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  13753238 catttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattc 13753308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 654350 - 654273
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||| |||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  654350 aaacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 654273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 3222833 - 3222762
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||    
T  3222833 catttggggttggcctagtggttggcttgggatcttgcagtttgct-cctcagaggtctcaggttcgattccc 3222762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 14212886 - 14212962
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| ||| |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14212886 aactcatttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccc 14212962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 9843936 - 9844003
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcga 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  9843936 catttggggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 11007163 - 11007233
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  11007163 catttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 5360270 - 5360198
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||| | | ||||||||||||||||||||||    
T  5360270 catttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccc 5360198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 28672065 - 28672137
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||| | |||||||| |||||||||||||    
T  28672065 catttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccc 28672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 1344935 - 1345005
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| |||||||||| |  ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  1344935 catttggggttgacctagtggttgg--tgggatcttggagtttgttcctccagaggtctcaggttcgattccc 1345005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 21148709 - 21148637
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    ||||||||||| |||||||||||    
T  21148709 catttggagttggcctagtggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccc 21148637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 33499472 - 33499537
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttc 390  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||| |   |||||||||||||    
T  33499472 catttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 9208250 - 9208322
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||  ||||||||| | |||||||||||||||||||||| |   ||||||||||||||||||||    
T  9208250 catttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc 9208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 33718662 - 33718587
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| ||||| ||||||| ||||||||| | ||||||||||||||||| || | |||||| |||||||||||||||    
T  33718662 aaacccatttagggttggtctagtggttggtttgggatcttggagtttacttctccagagatctcaggttcgattc 33718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 17081253 - 17081181
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||| | ||||||||| |||| ||||||||||||||||||| ||||| |||||| ||| |||||||    
T  17081253 catttgaggttagtctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccc 17081181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 8479310 - 8479357
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||    
T  8479310 catttggggttggcctagtggttgacttgggatcttggagtgtgctcc 8479357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 28968222 - 28968171
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| |||||||||||||||||||||||| | ||||||||||| ||||||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattc 28968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 11840909 - 11840971
Alignment:
Q  335 tggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||| ||||||||| || || |||||||| |||||||||||||| |||||||||    
T  11840909 tggccaagtggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccc 11840971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 17706481 - 17706435
Alignment:
Q  350 cttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  17706481 cttgggatcttggagtttgctcctccagaagtctcaagttcgattcc 17706435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 9690833 - 9690768
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||| |||||||||| | ||| ||| |||||||||||||  |||||||||| ||||||||||    
T  9690833 tggggttgacctagtggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatt 9690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 31039013 - 31039090
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||| || ||| ||| |||| | ||||||||||||||||| ||| || ||||| ||| |||||||    
T  31039013 aaacccatttggggttgacccagtagttggctttgaatcttggagtttgctccaccaaagatctcaagtttgattccc 31039090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 25289921 - 25289841
Alignment:
Q  317 tataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25289921 tataaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 25289841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 30807352 - 30807280
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30807352 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 30807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 35492909 - 35492981
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35492909 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 35492981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 45529953 - 45529881
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45529953 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 45529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 46576346 - 46576418
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46576346 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 46576418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 53424375 - 53424303
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53424375 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 53424303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 8456355 - 8456277
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8456355 taaacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccc 8456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 326 - 396
Target Start/End: Original strand, 25379760 - 25379830
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 25379830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 34492779 - 34492702
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  34492779 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccc 34492702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 21362941 - 21363013
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21362941 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 21363013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 30257622 - 30257694
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  30257622 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 30257694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 40940823 - 40940895
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40940823 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 40940895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 52455848 - 52455776
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  52455848 catttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccc 52455776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 40133648 - 40133576
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  40133648 catttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccc 40133576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 49258461 - 49258389
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  49258461 catttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccc 49258389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 26108299 - 26108362
Alignment:
Q  334 ttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 26108362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 48977386 - 48977457
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  48977386 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 48977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 52821833 - 52821762
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 52821762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 15566692 - 15566626
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 15566626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 26174114 - 26174180
Alignment:
Q  328 ttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 31538043 - 31537965
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||| ||| |||||||    
T  31538043 taaacccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccc 31537965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7485724 - 7485652
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7485724 catttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 7485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 45272615 - 45272543
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  45272615 catttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccc 45272543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 7470414 - 7470342
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| |||||||||||  |||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  7470414 catttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccc 7470342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 18177086 - 18177014
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||  |||||||| |||||||||||||||    
T  18177086 catttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccc 18177014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 25344256 - 25344184
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| |||||| ||||||||| |||||||    
T  25344256 catttggggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccc 25344184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 9853623 - 9853686
Alignment:
Q  334 ttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9853623 ttggtctagtggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 9853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 29915468 - 29915399
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||| |||||| |||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  29915468 catttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 29964621 - 29964552
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||| |||||| |||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  29964621 catttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 4462627 - 4462703
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |  || | |||||| |||||||||||    
T  4462627 aactcatttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccc 4462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 53234095 - 53234039
Alignment:
Q  339 ctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattc 53234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 55287801 - 55287873
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||||| |||||| ||||| |||||||||||  ||||||| |||||||||||||||    
T  55287801 catttggggttggcatagtggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccc 55287873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 9842913 - 9842990
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||| ||||||||| | ||||||||||||||||| |||| ||||||||||| | ||||||||||    
T  9842913 taaacccatttggggttggtctagtggttggtttgggatcttggagttttctcctccagaggtctc-gattcgattccc 9842990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 19857056 - 19857121
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  19857056 gggttggcctggtggttggcttgg-atcttggagtttgctcctccagatgtctcaggttcgattccc 19857121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 50582990 - 50583059
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| |   |||| ||||||||||||    
T  50582990 catttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 348 - 395
Target Start/End: Complemental strand, 39042028 - 39041981
Alignment:
Q  348 agcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  39042028 agcttgggatcttggagtttgctcctccagaggtctcaagttcgattc 39041981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 10083999 - 10083946
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccc 10083946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 10190922 - 10190869
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccc 10190869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 1692863 - 1692903
Alignment:
Q  356 atcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1692863 atcttggagtttgctcctccagaggtctcaggttcgattcc 1692903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 4252595 - 4252523
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||||| |   |||||||| ||| |||||||    
T  4252595 catttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccc 4252523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 32151428 - 32151492
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||| |||| |||  ||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattc 32151492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Original strand, 16140295 - 16140342
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||    
T  16140295 catttggggttggcctagtgattagtttgggatcttggagcttgctcc 16140342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 38732959 - 38733034
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| |||||| |||||| ||| |||||  ||||| ||||||||||||| ||| ||||||||||||||| ||||||    
T  38732959 aaacccatttgaggttgggctaatggttgacttggaatcttggagtttgttcctccagaggtctcaggtccgattc 38733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 36660768 - 36660838
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||||||||| |||||||||| | || ||||||||||||||||||| |   ||||||||||||| ||||    
T  36660768 catttggggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttcaattc 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 25017508 - 25017584
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||| ||||||||||||||| ||  ||| |||||| ||||||||||||||||| ||| || ||| ||||||||||||    
T  25017508 taaacccatttggggttggcccagatgttggcttgg-atcttggagtttgctcctccaaagatcttaggttcgattcc 25017584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 11390601 - 11390669
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||||||||| | ||| ||||||||||||| |||| ||| || | ||||||| ||||    
T  11390601 atttggggttggcctagtggttggtttgagatcttggagttttctcctccaaagatttcaggtttgatt 11390669  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 53288903 - 53288839
Alignment:
Q  333 gttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| ||||||| | ||||||| || ||||||||||| ||| |||||||||| |||||||||    
T  53288903 gttggccaagtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccc 53288839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 6041878 - 6041824
Alignment:
Q  318 ataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||||||||| |||| |||||  ||||  |||||||||||||||||    
T  6041878 ataaactcatttggggttgccctaatggttgacttgaaatcttggagtttgctcc 6041824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 49167070 - 49167124
Alignment:
Q  341 agtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattc 49167124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 14343478 - 14343418
Alignment:
Q  334 ttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||| ||| ||||| | ||| |||||||||||||||||| ||||| ||||||| |||||||    
T  14343478 ttggtctattggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 26158812 - 26158880
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggtt 389  Q
    |||||||||||||||||||||   ||| ||||| ||||||||||| |||||| |   ||||||||||||    
T  26158812 aactcatttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtt 26158880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 324 - 394
Target Start/End: Complemental strand, 10893 - 10823
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  10893 tcatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

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Target: scaffold0199 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 8606 - 8537
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  8606 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

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Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 1985829 - 1985906
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1985829 aaacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 1985906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 32986190 - 32986267
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  32986190 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 32986267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 46714390 - 46714459
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  46714390 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 22625277 - 22625197
Alignment:
Q  317 tataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  22625277 tataaacccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccc 22625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 25852212 - 25852284
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  25852212 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 25852284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 52983617 - 52983689
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  52983617 catttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 52983689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 34844957 - 34844887
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  34844957 catttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattc 34844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 40059051 - 40058981
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||    
T  40059051 catttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattc 40058981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 51535605 - 51535683
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  51535605 taaactcatttagggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccc 51535683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 35229172 - 35229237
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 35229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 54127546 - 54127469
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  54127546 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccc 54127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 13873494 - 13873422
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||    
T  13873494 catttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccc 13873422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 329 - 397
Target Start/End: Complemental strand, 27528990 - 27528922
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27528990 tggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 27528922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 33696478 - 33696406
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  33696478 catttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 33696406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 19660731 - 19660661
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  19660731 catttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 19660661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 45787908 - 45787831
Alignment:
Q  319 taaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||| |||||||||||||||||    
T  45787908 taaactcatttggggttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccc 45787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 20566347 - 20566420
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggt-ctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  20566347 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccc 20566420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 5609406 - 5609331
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||   ||| |||||||||||||||||    
T  5609406 aaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattc 5609331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 42245737 - 42245816
Alignment:
Q  318 ataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| | | ||||||| ||||||||||||    
T  42245737 ataaactcatttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccc 42245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 395
Target Start/End: Original strand, 33992612 - 33992694
Alignment:
Q  313 atattataaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||| |||| ||||| |||||| |||||||||| | |||||||||||||||||||||| |||||||||| |||||||||||    
T  33992612 atattaaaaacccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattc 33992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 35674945 - 35674868
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  35674945 aaacccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccc 35674868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 2351020 - 2351083
Alignment:
Q  334 ttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  2351020 ttggcctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccc 2351083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 324 - 395
Target Start/End: Complemental strand, 43719265 - 43719194
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||||||||||| ||||||||| | ||| |||||||||||||||||| |||||||| |||||||||||||    
T  43719265 tcatttggggttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattc 43719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 36131709 - 36131637
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||||| ||||||||| |||||||| | ||| ||||| ||||||||||||||||||    
T  36131709 catttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccc 36131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 44343512 - 44343584
Alignment:
Q  326 atttggggttggcctagtggttag-cttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  44343512 atttggggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccc 44343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 383
Target Start/End: Complemental strand, 55961939 - 55961883
Alignment:
Q  327 tttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtct 383  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 397
Target Start/End: Original strand, 34835525 - 34835599
Alignment:
Q  323 ctcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||||| |   |||||||| |||||||||||    
T  34835525 ctcatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 34835599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 49287872 - 49287926
Alignment:
Q  341 agtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 49287926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 7392143 - 7392090
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 7392090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 32942369 - 32942438
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| |||| |||||||| | |||||||||||    
T  32942369 atttggggttggtctagtggttggcttgagatcttggagtttactcctccagaggtttaaggttcgattc 32942438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 34722169 - 34722222
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagag 379  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  34722169 atttggggttggcttagtggttggcttgggatcttggagtttgctcctccagag 34722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 397
Target Start/End: Complemental strand, 20078159 - 20078111
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  20078159 gcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 20078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 13584453 - 13584381
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||||||||| || || ||| |||||||||||||| ||| | |||||| |||||||||||    
T  13584453 catttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccc 13584381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 41621795 - 41621748
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  41621795 catttggggttggcctaatggttggcttgagatcttggagtttgctcc 41621748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 13550206 - 13550268
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcagg 387  Q
    |||||| ||||||||||||||||  |||| ||||| |||||||||||| | ||||||||||||    
T  13550206 catttgcggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctcagg 13550268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Complemental strand, 12500231 - 12500185
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||    
T  12500231 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccc 12500185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 368
Target Start/End: Original strand, 10125783 - 10125823
Alignment:
Q  328 ttggggttggcctagtggttagcttgggatcttggagtttg 368  Q
    |||| |||||||||||||||  |||||||||||||||||||    
T  10125783 ttggagttggcctagtggttgacttgggatcttggagtttg 10125823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 12710189 - 12710249
Alignment:
Q  337 gcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| | ||||||||||||||| |||| | |   ||||||||||||||||||||    
T  12710189 gcctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccc 12710249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 17324759 - 17324836
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17324759 aaactcatttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccc 17324836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 33827777 - 33827700
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  33827777 aaacccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccc 33827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 397
Target Start/End: Complemental strand, 44946257 - 44946180
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44946257 aaacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 44946180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 397
Target Start/End: Complemental strand, 44976354 - 44976281
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  44976354 tcatttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccc 44976281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 18976624 - 18976552
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  18976624 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccc 18976552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 11941409 - 11941337
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11941409 catttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 11941337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 15037952 - 15038029
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||||||||||||||  || |||||||||||||||||||| ||| ||||||||||||||||||||    
T  15037952 aaacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 15038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 397
Target Start/End: Original strand, 4852552 - 4852628
Alignment:
Q  321 aactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  4852552 aactcatttggggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccc 4852628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 27290598 - 27290658
Alignment:
Q  337 gcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27290598 gcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 27290658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 32845089 - 32845161
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| | || |||||||||||||||    
T  32845089 catttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccc 32845161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 41313990 - 41314062
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||| | |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  41313990 catttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 41314062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 397
Target Start/End: Complemental strand, 10582174 - 10582117
Alignment:
Q  340 tagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 10582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 8192550 - 8192478
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| |   ||||||||||||||||||||    
T  8192550 catttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccc 8192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 24196002 - 24196074
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||| |||| ||| ||||| |||||||| |||||||||||||||    
T  24196002 catttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccc 24196074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 25293164 - 25293236
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25293164 catttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccc 25293236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 6714480 - 6714409
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||||| |||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  6714480 catttgggattggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattcc 6714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 41329842 - 41329913
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||| |||| ||||||||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccc 41329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 30467029 - 30466959
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||||||||||||||||||||| | ||||||| |||||||||| ||| | ||||||||||||||||||||    
T  30467029 catttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattc 30466959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 4567636 - 4567567
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||  |||| |||||||||||||||    
T  4567636 catttggggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatt 4567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 326 - 397
Target Start/End: Original strand, 8258896 - 8258967
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||| | || ||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  8258896 atttggggttgacataatggttagtttgagatcttggagtttgctcctccagatgtctcaggttcgattccc 8258967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 43374505 - 43374452
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 43374452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 34516589 - 34516537
Alignment:
Q  343 tggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 19054023 - 19054094
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||||||||| ||||||||| || ||||| ||||||||||| |||||| ||| |||||||||||| ||||||    
T  19054023 catttggggtgggcctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattcc 19054094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 36390765 - 36390698
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||||||| | |||||||||  ||||||||| | ||| |||||||||||||||||    
T  36390765 catttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatt 36390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 1191530 - 1191583
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccc 1191583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 5394034 - 5394087
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccc 5394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 36242492 - 36242439
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| ||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccc 36242439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 27269549 - 27269477
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||||| | | |||| | ||||| |||||||    
T  27269549 catttggggttggcatagtggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccc 27269477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 40997549 - 40997477
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| ||| || |||||||||  ||||||||||||||||||||||| ||| |||||||| |||| ||||||    
T  40997549 catttgaggtgggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccc 40997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 397
Target Start/End: Original strand, 35171831 - 35171870
Alignment:
Q  358 cttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35171831 cttggagtttgctcctccagaggtctcaggttcgattccc 35171870  T

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Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 19606038 - 19605972
Alignment:
Q  331 gggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||| |||||||||| |||||||||||||||||  ||||| |   ||||||||||||||||||||    
T  19606038 gggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccc 19605972  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 4618880 - 4618815
Alignment:
Q  329 tggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| |   |||| ||||||||||||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatt 4618815  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 18691975 - 18692052
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||| ||||| |||||| || ||||||| |||||  |   || |||||||||||||||||    
T  18691975 aaactcatttggggttggcctaatggtttgcttggaattttggagtgtgctcatctcaagatctcaggttcgattccc 18692052  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 918899 - 918851
Alignment:
Q  324 tcatttggggttggcctagtggttagcttgggatcttggagtttgctcc 372  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||||||    
T  918899 tcatttggggttgacctagtggttggcttgggattttgaagtttgctcc 918851  T

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Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 32526284 - 32526212
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||| |||||| ||||||||   ||||||||||| |||||||||| |   ||||||||||||||||||||    
T  32526284 catttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccc 32526212  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 44610090 - 44610140
Alignment:
Q  343 tggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgat 393  Q
    ||||| ||||| |||||||||||||||||  ||| ||||||||||||||||    
T  44610090 tggttggcttgagatcttggagtttgctcttccaaaggtctcaggttcgat 44610140  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 45271401 - 45271454
Alignment:
Q  344 ggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||| |||||||||||| ||||||||| | |||||||| ||| |||||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccc 45271454  T

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Target: scaffold0576 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 5281 - 5209
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5281 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 5209  T

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Target: scaffold0068 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 41843 - 41771
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41843 catttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 41771  T

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Target: scaffold0070 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 40323 - 40395
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  40323 catttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccc 40395  T

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Target: scaffold0026 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 97565 - 97493
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  97565 catttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccc 97493  T

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Target: scaffold0217 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 7507 - 7436
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7507 atttggggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 7436  T

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Target: scaffold0051 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 53070 - 52998
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||||||    
T  53070 catttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccc 52998  T

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Target: scaffold0717 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 150 - 85
Alignment:
Q  332 ggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccc 85  T

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Target: scaffold0460 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 8378 - 8306
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  8378 catttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccc 8306  T

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Target: scaffold0049 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 66755 - 66831
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattcc 396  Q
    |||| |||||||| |||| ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  66755 aaacccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattcc 66831  T

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Target: scaffold0240 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 12952 - 12884
Alignment:
Q  326 atttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgatt 394  Q
    ||||||| ||||||||||||||  ||||||||||||||||| ||||| |||||| ||||||||||||||    
T  12952 atttgggattggcctagtggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

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Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 161831 - 161879
Alignment:
Q  349 gcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  161831 gcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 161879  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 27774 - 27846
Alignment:
Q  325 catttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||| ||||||||| | ||||||| |||||||||||||| |   ||||||| ||||||||||||    
T  27774 catttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccc 27846  T

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Target: scaffold0200 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 26747 - 26672
Alignment:
Q  320 aaactcatttggggttggcctagtggttagcttgggatcttggagtttgctcccccagaggtctcaggttcgattc 395  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||||||||||   | |||||||||| ||| |||||    
T  26747 aaacccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattc 26672  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 397
Target Start/End: Original strand, 20246 - 20292
Alignment:
Q  351 ttgggatcttggagtttgctcccccagaggtctcaggttcgattccc 397  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||    
T  20246 ttgggatcttggagtttgctccttcaaaggtctcaggtttgattccc 20292  T

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