View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16636_high_9 (Length: 340)
Name: NF16636_high_9
Description: NF16636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16636_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 7 - 325
Target Start/End: Original strand, 26700808 - 26701126
Alignment:
| Q |
7 |
gaatcatctcatccaccaatccaaaaccctccaaaaatttcccaacaccacacaatccacgtatcaacgaaccatacgtaaattcgttcggacaaacccc |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26700808 |
gaatcatctcatccaccaatccaaaaccctccaaaaatttcccaacaccacacaatccacgtatcaacgaaccatacgtaaattcgttcggacaaacccc |
26700907 |
T |
|
| Q |
107 |
atttcccatcatctcattataaaactcaaaaccctcatcaacaaatccatttctacacaaacaatcaatcacaatactatacataacaacatttcctttc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26700908 |
atttcccatcatctcattataaaactcaaaaccctcatcaacaaatccatttctacacaaacaatcaatcacaatactatacataacaacatttcctttc |
26701007 |
T |
|
| Q |
207 |
acnnnnnnnccatctttttccttttccttctccttctcaatcattctcaacaaattcacagcttcattcaccctcccgttttcacataacccattaatca |
306 |
Q |
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|| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26701008 |
acaaaaaaaccatccttttccttctccttctccttctcaatcattctcaacaaattcacagcttcattcaccctcccgttttcacataacccattaatca |
26701107 |
T |
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| Q |
307 |
aaatcccataactaacctc |
325 |
Q |
| |
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||||||||||||||||||| |
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| T |
26701108 |
aaatcccataactaacctc |
26701126 |
T |
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