View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16637_high_6 (Length: 322)
Name: NF16637_high_6
Description: NF16637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16637_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 13076179 - 13075868
Alignment:
| Q |
1 |
acaaacattaaccatattaatagggaatcaaattagcaatggaaagacaattgctaacagtaatactaactaaaccatcgttactagacatggtagaagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13076179 |
acaaacattaaccatattaatagggaatcaaattagcaatggaaagacaattgctaacagtaatactaactaaaccatcgttactagacatggtagaagt |
13076080 |
T |
|
| Q |
101 |
aggtgatgcttttagatcctcaaaagcactctcacatgtagaaacatcagccataacagcactaagcataactgtaattgtaccaagatcgcgcgacgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
13076079 |
aggtgatgcttttagatcctcaaaagcactctcacatgtagaaacatcagccataacagcactaagcataactgtaattgtaccaagatcgcgcgatgca |
13075980 |
T |
|
| Q |
201 |
atagcatccgctgctttttgaagattgtccaaagcactattgtattgttccttacaatcagcaactgcactagcaacctctggattcttagctgcatgtg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13075979 |
atagcatccgctgctttttgaagattgtccaaagcactattgtattgttccttacaatcagcaactgcactagcaacctctggattcttagctgcatgtg |
13075880 |
T |
|
| Q |
301 |
catccacctttg |
312 |
Q |
| |
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|| ||||||||| |
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| T |
13075879 |
cagccacctttg |
13075868 |
T |
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