View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16638_high_51 (Length: 283)
Name: NF16638_high_51
Description: NF16638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16638_high_51 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43058344 - 43058541
Alignment:
| Q |
1 |
ttttaattaatcatattttaaaagaagacaacgaatgtgctgacaaggttggcaaatttggtgctataagatgtagatgtctcctcctcctcaattaaat |
100 |
Q |
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| T |
43058344 |
ttttaattaatcatattttaaaagaagacaacgaatgtgctgacaaggttggcaaatttggtgctataagatgtagatgtctcctcctcctcaattaaat |
43058443 |
T |
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| Q |
101 |
atttccctgcttacaaatatctttgaggtatttagacaacgcatcgctgnnnnnnnttctcctattttcctttcccttggtctttatttccccttgat |
198 |
Q |
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| T |
43058444 |
atttctctgcttgcaaatatctttgaggtatttagacaacacattgctaaaaaaaattctcccattttcctttcccttggtctttatttccccttgat |
43058541 |
T |
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