View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16640_high_18 (Length: 227)
Name: NF16640_high_18
Description: NF16640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16640_high_18 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 45519684 - 45519905
Alignment:
| Q |
6 |
atttatccctaaaacggagattttatttatttattgaacctatatataattagggaagagttcaatgaatatattttggggtgctagaatccaatgaatt |
105 |
Q |
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| T |
45519684 |
atttatccctaaaacggagattttatttatttattgaacctatatataattagggaagagttcaatgaatatattttggggtgctagaatccaatgaatt |
45519783 |
T |
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| Q |
106 |
tgtatccaaaaatgtagcaaagagttgatgaatggtggtggctgaaaactatgaaaacaatgagcttaataaaaattgaggaactgaatagtttaatggt |
205 |
Q |
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| T |
45519784 |
tgtatccaaaaatgtagcaaagagttgatgaatggtggtggctgaaaactatgaaaacaatgagcttaataaaaattgaggaactgaatagtttaatggt |
45519883 |
T |
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| Q |
206 |
attaatgaattaacgttattaa |
227 |
Q |
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| T |
45519884 |
attaatgaattaacgttattaa |
45519905 |
T |
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