View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16640_low_16 (Length: 247)
Name: NF16640_low_16
Description: NF16640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16640_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 32810565 - 32810746
Alignment:
| Q |
11 |
cacagagtaattatgtagaacaagaacatacacggagaatagctatagcggcagtttaatcagcagaggtatgccatctctaaccagtaactactgacca |
110 |
Q |
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| T |
32810565 |
cacagagtaattatgtagaacaagaacatacacggagaatagctatagcggcagtttaatcagcagaggtatgccatctctaaccagtaactactgacca |
32810664 |
T |
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| Q |
111 |
attttgattgcatacacgcaatatttcccccactttcagaacaatggaactnnnnnnntaggtcagttttgatttcttattc |
192 |
Q |
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| T |
32810665 |
attttgattgcatacacgcaatatttcccccactttcagaacaatggaactaaaaaaataggtcagttttgatttattattc |
32810746 |
T |
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