View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16642_high_17 (Length: 288)
Name: NF16642_high_17
Description: NF16642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16642_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 36330498 - 36330766
Alignment:
| Q |
1 |
tgcatagttctagcattcttctcaattgattgaaccctaatctttagtttattgtgatcaacaaaatttggattaagaagatcctctatggtaatgagtc |
100 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36330498 |
tgcatagttctaccattcttctcaattgattgaaccctaatctttagtttattgtgatcaacaaaatttggattaagaagatcctctatggtaatgagtc |
36330597 |
T |
|
| Q |
101 |
catcaccacacacaacaacctcgcaactaggatcaaaagcatcactcatcatcaacttcttattctctgcattaccttgaaaagtctcagtaggcatacc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36330598 |
catcaccacacacaacaacctcgcaactaggatcaaaagcatcactcatcatcaacttcttattctctgcattaccttgaaaagtctcagtaggcatacc |
36330697 |
T |
|
| Q |
201 |
agtaattccttgtatcatcctcacatgtcttccctcagcatttgcatccctctttgttccaatgtaaca |
269 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36330698 |
agtaattccttctatcatcctcacatgtcttccctcagcatttgcatccctctttgttccaatgtaaca |
36330766 |
T |
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