View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16642_low_17 (Length: 302)
Name: NF16642_low_17
Description: NF16642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16642_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 25930005 - 25929721
Alignment:
| Q |
1 |
taagtctgaatgcaacagtgatcctcagctattacaccagaatttcagaactaaaagttttacagaaaatattatctctgtcaataagaacaaacaaatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25930005 |
taagtctgaatgcaacagtgatcctcagctattacaccagaatttcagaactaaaatttttacagaaaatattatctctgtcaataagaacaaacaaatc |
25929906 |
T |
|
| Q |
101 |
atgagatgaagtcatgccccctccatcctctctaattggtctcaccgtacctgtaaataactgccacatcaacagtgctcttcctattattttattggct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25929905 |
atgagatgaagtcatgccccctccatcctctctaattagtctcaccgtacctgtaaataactgccacatcaacagtgctcttcctattattttattggct |
25929806 |
T |
|
| Q |
201 |
acttgattctcattgtttccatttttacctttagcccttcgccaaaaaactctccacactttttggtttcccttggcttcctaac |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25929805 |
acttgattctcattgtttccatttttacctttagcccttcgccaaaaaactctccacactttttggtttcccttggcttcctaac |
25929721 |
T |
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