View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16642_low_24 (Length: 271)
Name: NF16642_low_24
Description: NF16642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16642_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 32835767 - 32836006
Alignment:
| Q |
18 |
cttgcaagtgtttaatcttttcgacagaatgtaatgagattcctaataggagcacaagtagatcaacaagatgaggacataatgcaaagatgagttaatt |
117 |
Q |
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| T |
32835767 |
cttgcaagtgtttaatctattcgacagaatgtaatgagattcctaataggagcacaagtagatcaacaagatgaggacataatgcaaagatgagttaatt |
32835866 |
T |
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| Q |
118 |
tctaaccaataataaccaataaatgttgtacttctttatatgagataaaataattattcctagatattgaattttttcattttagccaatcggatgctga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32835867 |
tctaaccaataataaccaataaatgttgtacttctttatatgagataaaataattattcctagatattgaattttttcattttagccaatcggatgctga |
32835966 |
T |
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| Q |
218 |
aacgttttcggtcattttcatttaaaaagttctgtctgtg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
32835967 |
aacgttttcggtcattttcatttaaaaagttctgtctgtg |
32836006 |
T |
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