View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16644_low_9 (Length: 222)
Name: NF16644_low_9
Description: NF16644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16644_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 4620745 - 4620910
Alignment:
| Q |
10 |
gagcagagaacaaagaaacaaaacaatatctaacgatcatatacatacaatcgcttacgagtcgggacgatacgaaattgaagaaaaagaaagcttgccc |
109 |
Q |
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| T |
4620745 |
gagcagaaaacaaagaaacaaaacaatatctaacgatcatatacatacaatcgcttacgagtcgggacgatacgaaattgaagaaaaagaaagcttgccc |
4620844 |
T |
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| Q |
110 |
tggaaggaagagaaatattgtagagaggagcagattggttccatatatatatatatattctcaccg |
175 |
Q |
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| T |
4620845 |
tggaaggaagagaaagattgtagagaggagcagattggttccatatatatatatatattctcaccg |
4620910 |
T |
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