View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16645_high_12 (Length: 291)
Name: NF16645_high_12
Description: NF16645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16645_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 45671670 - 45671911
Alignment:
| Q |
13 |
catcaagagtttaaatacaaagggtcaaccatgtttaggctccgttccttctcattcaagacaagctgtaccagaagacacgagaagtttatagacaaac |
112 |
Q |
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| T |
45671670 |
catcaagagtttaaagacaaagggtcaaccatgtttaggctccgttccttctcattcaagacaagctgtaccagaagacacgagaagtttatagacaaac |
45671769 |
T |
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| Q |
113 |
acatttgttcttattcttcataacgcagacaaaaacccatctaaatacgtgtcatttatccaaatctgtactctttgcagccacataattcatggtgtgg |
212 |
Q |
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| T |
45671770 |
acatttgttcttattcttcataacgcagacaaaaacccatctaaatacgtgtcatttatccaaatctgtaatctttgcagccacataattcatggtgtgg |
45671869 |
T |
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| Q |
213 |
acaccaccaaagcatcaactgtgactgattttgattcttgtg |
254 |
Q |
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| T |
45671870 |
acaccaccaaagcatcaactgtgactgattttgattcttgtg |
45671911 |
T |
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