View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16645_high_18 (Length: 237)
Name: NF16645_high_18
Description: NF16645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16645_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 42395095 - 42395302
Alignment:
| Q |
16 |
atgaaaacagttaatacaacaaatgtgattacaaaaactagtagtattaatttgatatgttaaagttgaggtcggtcgataaagattaactacacttaaa |
115 |
Q |
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| T |
42395095 |
atgaaaacagttaatacaacaaatgtgattacaaaaactagtagtattaatttgatatgttaaagttgaggtcggtcgataaagattaactacacttaaa |
42395194 |
T |
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| Q |
116 |
atttgagttaaacctaaatcaatcgtaaaaaaccaaattata----aagtgcaaatcaactccactcataagctctattactatttgttatatatctatt |
211 |
Q |
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||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
42395195 |
atttgagttgaacctaaatcaatcgtaaaaaaccaaattatatattaagtgcaaatcaactccactcataagctctattactatttgttatataactatt |
42395294 |
T |
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| Q |
212 |
caatgtgg |
219 |
Q |
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|||||||| |
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| T |
42395295 |
caatgtgg |
42395302 |
T |
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