View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16646_high_1 (Length: 409)

Name: NF16646_high_1
Description: NF16646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16646_high_1
NF16646_high_1
[»] chr3 (86 HSPs)
chr3 (1-203)||(6110064-6110266)
chr3 (1-203)||(10572597-10572799)
chr3 (1-203)||(15600889-15601091)
chr3 (1-203)||(15607434-15607636)
chr3 (1-200)||(13211305-13211504)
chr3 (1-203)||(13248607-13248809)
chr3 (1-201)||(16482488-16482688)
chr3 (1-197)||(17781123-17781319)
chr3 (1-197)||(10579360-10579556)
chr3 (1-201)||(18522665-18522865)
chr3 (1-203)||(15357591-15357793)
chr3 (17-203)||(8490488-8490674)
chr3 (1-201)||(18519980-18520177)
chr3 (1-197)||(19089750-19089946)
chr3 (1-201)||(17200189-17200389)
chr3 (1-184)||(15342224-15342407)
chr3 (1-201)||(13516813-13517013)
chr3 (42-203)||(18640792-18640953)
chr3 (2-197)||(32056906-32057101)
chr3 (1-197)||(1647526-1647726)
chr3 (15-201)||(16200128-16200313)
chr3 (11-203)||(29924971-29925163)
chr3 (11-203)||(29974124-29974316)
chr3 (15-201)||(16200434-16200619)
chr3 (2-196)||(24253394-24253589)
chr3 (1-97)||(17136465-17136561)
chr3 (319-393)||(8608391-8608465)
chr3 (319-393)||(11183657-11183731)
chr3 (319-382)||(12557279-12557342)
chr3 (323-382)||(14890874-14890933)
chr3 (323-382)||(15599551-15599610)
chr3 (319-381)||(8806561-8806623)
chr3 (139-201)||(18534758-18534820)
chr3 (319-381)||(21610009-21610071)
chr3 (239-295)||(6109972-6110028)
chr3 (239-295)||(8490396-8490452)
chr3 (239-295)||(13248515-13248571)
chr3 (319-382)||(12477318-12477381)
chr3 (328-382)||(30093659-30093713)
chr3 (239-295)||(13211211-13211267)
chr3 (239-295)||(18640989-18641045)
chr3 (319-379)||(23285923-23285983)
chr3 (319-379)||(14885606-14885666)
chr3 (239-295)||(17136137-17136193)
chr3 (245-295)||(10579603-10579653)
chr3 (239-295)||(15607672-15607729)
chr3 (156-201)||(18510924-18510969)
chr3 (239-295)||(15351237-15351293)
chr3 (239-295)||(15357829-15357885)
chr3 (239-295)||(16482727-16482782)
chr3 (239-295)||(17200427-17200483)
chr3 (239-295)||(18519885-18519941)
chr3 (245-295)||(10572840-10572890)
chr3 (239-296)||(1647768-1647825)
chr3 (239-295)||(15601127-15601184)
chr3 (239-295)||(13516719-13516775)
chr3 (325-381)||(15682951-15683007)
chr3 (239-295)||(17781358-17781414)
chr3 (239-295)||(19089985-19090041)
chr3 (239-295)||(32057144-32057200)
chr3 (324-382)||(9552850-9552908)
chr3 (329-382)||(8203360-8203413)
chr3 (325-382)||(14420520-14420577)
chr3 (319-359)||(15622702-15622742)
chr3 (239-295)||(18510829-18510885)
chr3 (239-295)||(18522570-18522626)
chr3 (239-287)||(18534671-18534719)
chr3 (325-360)||(25265779-25265814)
chr3 (344-382)||(13109591-13109629)
chr3 (325-379)||(41000510-41000564)
chr3 (325-379)||(41009292-41009346)
chr3 (325-382)||(15697879-15697936)
chr3 (323-380)||(15912135-15912191)
chr3 (239-295)||(29924879-29924935)
chr3 (239-295)||(29974032-29974088)
chr3 (326-357)||(5957444-5957475)
chr3 (325-360)||(10720542-10720577)
chr3 (326-357)||(37263296-37263327)
chr3 (326-357)||(46373892-46373923)
chr3 (324-358)||(3677771-3677805)
chr3 (327-365)||(14396407-14396445)
chr3 (324-358)||(30014342-30014376)
chr3 (324-358)||(41433935-41433969)
chr3 (319-356)||(70395-70432)
chr3 (325-382)||(7095804-7095861)
chr3 (325-361)||(18960552-18960588)
[»] scaffold0234 (4 HSPs)
scaffold0234 (1-203)||(2326-2528)
scaffold0234 (1-203)||(11217-11419)
scaffold0234 (239-295)||(2564-2620)
scaffold0234 (239-295)||(11455-11511)
[»] chr4 (59 HSPs)
chr4 (1-203)||(19926765-19926967)
chr4 (1-203)||(26970463-26970665)
chr4 (1-203)||(55612683-55612885)
chr4 (1-203)||(868597-868799)
chr4 (1-203)||(5707320-5707522)
chr4 (1-203)||(26963640-26963842)
chr4 (1-201)||(18262214-18262414)
chr4 (1-203)||(5713948-5714150)
chr4 (1-203)||(10621338-10621540)
chr4 (1-203)||(10628417-10628619)
chr4 (1-201)||(18269070-18269275)
chr4 (1-201)||(28393139-28393339)
chr4 (1-201)||(4426609-4426808)
chr4 (5-191)||(8845215-8845401)
chr4 (5-191)||(8858179-8858365)
chr4 (88-203)||(12357136-12357251)
chr4 (4-195)||(20311299-20311491)
chr4 (11-197)||(5668140-5668327)
chr4 (1-197)||(10677560-10677753)
chr4 (1-197)||(10891200-10891393)
chr4 (4-201)||(5616215-5616414)
chr4 (3-197)||(35223576-35223760)
chr4 (239-296)||(19927003-19927060)
chr4 (325-381)||(3841888-3841944)
chr4 (239-295)||(5713856-5713912)
chr4 (319-379)||(14883771-14883831)
chr4 (239-295)||(26963548-26963604)
chr4 (239-295)||(26970371-26970427)
chr4 (319-382)||(3386324-3386387)
chr4 (319-382)||(20556141-20556204)
chr4 (239-295)||(5707228-5707284)
chr4 (239-295)||(10621576-10621632)
chr4 (239-295)||(12357044-12357100)
chr4 (239-293)||(868507-868561)
chr4 (239-296)||(17142372-17142429)
chr4 (239-295)||(10628655-10628711)
chr4 (239-295)||(55612594-55612650)
chr4 (239-297)||(4426847-4426905)
chr4 (241-295)||(28393380-28393434)
chr4 (239-295)||(18268976-18269032)
chr4 (319-382)||(16725986-16726049)
chr4 (87-154)||(39074278-39074346)
chr4 (239-288)||(55992680-55992729)
chr4 (325-381)||(26218480-26218536)
chr4 (11-177)||(21454152-21454319)
chr4 (319-357)||(15079813-15079851)
chr4 (239-280)||(5668371-5668412)
chr4 (325-382)||(14736118-14736175)
chr4 (239-287)||(8845118-8845166)
chr4 (239-287)||(8858082-8858130)
chr4 (319-359)||(15077507-15077547)
chr4 (239-279)||(18262136-18262176)
chr4 (94-153)||(11161913-11161972)
chr4 (325-367)||(1888796-1888838)
chr4 (344-378)||(15900744-15900778)
chr4 (239-293)||(20311207-20311261)
chr4 (324-356)||(9187096-9187128)
chr4 (239-287)||(24699958-24700006)
chr4 (14-66)||(39074218-39074270)
[»] chr1 (39 HSPs)
chr1 (1-203)||(18252030-18252232)
chr1 (1-203)||(18532519-18532721)
chr1 (1-203)||(27131414-27131616)
chr1 (1-201)||(21171238-21171438)
chr1 (1-201)||(27310582-27310782)
chr1 (1-201)||(16359040-16359240)
chr1 (1-197)||(36816638-36816834)
chr1 (1-203)||(3855924-3856126)
chr1 (1-203)||(22657226-22657429)
chr1 (3-197)||(27277564-27277756)
chr1 (11-169)||(12006554-12006712)
chr1 (4-169)||(12014292-12014457)
chr1 (239-296)||(18251935-18251992)
chr1 (239-296)||(18532757-18532814)
chr1 (323-382)||(1958052-1958111)
chr1 (319-382)||(22430150-22430213)
chr1 (239-295)||(27310821-27310877)
chr1 (5-191)||(9917927-9918106)
chr1 (239-295)||(16359280-16359336)
chr1 (319-367)||(35071822-35071870)
chr1 (325-382)||(2387380-2387437)
chr1 (239-295)||(21171479-21171535)
chr1 (344-382)||(14818077-14818115)
chr1 (325-382)||(13453041-13453098)
chr1 (128-197)||(30720625-30720694)
chr1 (242-287)||(36816881-36816926)
chr1 (239-295)||(3856164-3856220)
chr1 (319-359)||(6202951-6202991)
chr1 (243-295)||(22657469-22657521)
chr1 (239-295)||(27131652-27131704)
chr1 (325-379)||(31542170-31542224)
chr1 (96-173)||(3403248-3403325)
chr1 (96-173)||(3443494-3443571)
chr1 (325-358)||(27168335-27168368)
chr1 (239-295)||(27277800-27277856)
chr1 (326-357)||(5635645-5635676)
chr1 (325-360)||(31554387-31554422)
chr1 (352-382)||(19371051-19371081)
chr1 (328-356)||(2341491-2341519)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-203)||(18288-18490)
scaffold0220 (239-295)||(18196-18252)
[»] chr7 (49 HSPs)
chr7 (1-203)||(29327784-29327986)
chr7 (1-203)||(11536067-11536269)
chr7 (1-203)||(11542985-11543187)
chr7 (1-201)||(15152445-15152645)
chr7 (1-201)||(15148144-15148344)
chr7 (1-201)||(18561009-18561209)
chr7 (1-201)||(12750828-12751028)
chr7 (1-197)||(12738542-12738738)
chr7 (11-201)||(18257857-18258047)
chr7 (15-197)||(13392157-13392338)
chr7 (319-381)||(23884747-23884809)
chr7 (1-181)||(2364917-2365096)
chr7 (239-296)||(2653275-2653332)
chr7 (239-296)||(12738442-12738499)
chr7 (239-295)||(11543223-11543279)
chr7 (319-382)||(8812678-8812741)
chr7 (319-382)||(13268533-13268596)
chr7 (110-197)||(39111819-39111905)
chr7 (11-170)||(7396221-7396381)
chr7 (239-295)||(11536305-11536361)
chr7 (239-295)||(12750733-12750789)
chr7 (239-295)||(15152350-15152406)
chr7 (240-295)||(29327690-29327745)
chr7 (239-295)||(15148049-15148105)
chr7 (86-129)||(3132748-3132791)
chr7 (240-295)||(13392030-13392085)
chr7 (88-153)||(10234179-10234244)
chr7 (239-295)||(18258087-18258143)
chr7 (325-358)||(12586623-12586656)
chr7 (325-382)||(15186512-15186569)
chr7 (325-382)||(16146571-16146628)
chr7 (325-382)||(29082939-29082996)
chr7 (171-203)||(2653207-2653239)
chr7 (239-295)||(18560913-18560969)
chr7 (325-360)||(567505-567540)
chr7 (323-358)||(804907-804942)
chr7 (322-357)||(840417-840452)
chr7 (322-357)||(847593-847628)
chr7 (322-357)||(1205597-1205632)
chr7 (325-360)||(5207438-5207473)
chr7 (326-357)||(9463194-9463225)
chr7 (326-357)||(16399976-16400007)
chr7 (325-360)||(27974550-27974585)
chr7 (324-358)||(3430657-3430691)
chr7 (326-372)||(13491232-13491278)
chr7 (324-358)||(16293791-16293825)
chr7 (325-382)||(13833710-13833767)
chr7 (319-356)||(34136899-34136936)
chr7 (325-361)||(4950004-4950040)
[»] chr6 (46 HSPs)
chr6 (1-203)||(27381257-27381459)
chr6 (1-203)||(27471640-27471842)
chr6 (1-201)||(17684474-17684674)
chr6 (1-203)||(29308890-29309092)
chr6 (1-203)||(29315850-29316052)
chr6 (1-201)||(16566325-16566525)
chr6 (1-203)||(17691445-17691647)
chr6 (1-201)||(188982-189182)
chr6 (1-201)||(25537164-25537364)
chr6 (1-201)||(11651725-11651925)
chr6 (13-201)||(13359286-13359474)
chr6 (323-382)||(20457232-20457291)
chr6 (1-164)||(20553592-20553755)
chr6 (323-382)||(27072060-27072119)
chr6 (239-293)||(17691683-17691737)
chr6 (328-382)||(22326110-22326164)
chr6 (239-295)||(27381495-27381551)
chr6 (239-295)||(27471878-27471934)
chr6 (239-295)||(29308798-29308854)
chr6 (239-295)||(29315758-29315814)
chr6 (319-382)||(621123-621186)
chr6 (319-382)||(20056094-20056157)
chr6 (239-295)||(17684712-17684768)
chr6 (11-184)||(8509941-8510115)
chr6 (241-295)||(11651630-11651684)
chr6 (11-180)||(27925772-27925946)
chr6 (1-165)||(17850500-17850663)
chr6 (326-382)||(19715888-19715944)
chr6 (239-295)||(25537405-25537461)
chr6 (325-381)||(28270071-28270127)
chr6 (325-381)||(28305038-28305094)
chr6 (325-381)||(28348821-28348877)
chr6 (141-196)||(31258065-31258120)
chr6 (324-382)||(25504303-25504361)
chr6 (325-382)||(25700559-25700616)
chr6 (239-287)||(13359512-13359560)
chr6 (239-287)||(16566563-16566611)
chr6 (239-297)||(189221-189282)
chr6 (325-382)||(18219276-18219333)
chr6 (325-382)||(23981844-23981901)
chr6 (326-357)||(9142926-9142957)
chr6 (325-360)||(16636388-16636423)
chr6 (325-360)||(27056632-27056667)
chr6 (239-281)||(16394484-16394526)
chr6 (325-382)||(18112896-18112953)
chr6 (122-187)||(22259925-22259990)
[»] scaffold0390 (4 HSPs)
scaffold0390 (1-203)||(6939-7141)
scaffold0390 (1-203)||(13955-14157)
scaffold0390 (239-295)||(7177-7233)
scaffold0390 (239-295)||(14193-14249)
[»] chr8 (29 HSPs)
chr8 (1-203)||(21940665-21940867)
chr8 (2-201)||(28554885-28555084)
chr8 (1-201)||(22171491-22171689)
chr8 (4-197)||(6094129-6094322)
chr8 (1-197)||(24642655-24642851)
chr8 (70-197)||(24636860-24636987)
chr8 (319-382)||(20740986-20741049)
chr8 (319-382)||(20744506-20744569)
chr8 (319-378)||(20735952-20736011)
chr8 (328-382)||(22160921-22160975)
chr8 (239-296)||(22070107-22070164)
chr8 (239-295)||(21940573-21940629)
chr8 (239-295)||(6094031-6094087)
chr8 (239-295)||(22171396-22171452)
chr8 (243-295)||(24642556-24642608)
chr8 (331-382)||(32001989-32002040)
chr8 (1-191)||(38232382-38232570)
chr8 (239-295)||(28554791-28554847)
chr8 (325-384)||(6665956-6666015)
chr8 (325-384)||(6673618-6673677)
chr8 (12-173)||(32872857-32873019)
chr8 (124-182)||(2375027-2375085)
chr8 (102-165)||(10920234-10920297)
chr8 (325-364)||(24709308-24709347)
chr8 (325-359)||(22104979-22105013)
chr8 (325-372)||(19837639-19837686)
chr8 (242-295)||(2374947-2375000)
chr8 (258-295)||(24636605-24636642)
chr8 (325-377)||(39843389-39843441)
[»] chr2 (23 HSPs)
chr2 (1-203)||(21330253-21330455)
chr2 (1-203)||(18796506-18796708)
chr2 (5-201)||(18619807-18620002)
chr2 (58-197)||(19692598-19692737)
chr2 (11-138)||(20977957-20978084)
chr2 (239-296)||(21330493-21330550)
chr2 (1-169)||(36270199-36270368)
chr2 (325-382)||(25494065-25494122)
chr2 (11-169)||(18822115-18822275)
chr2 (332-382)||(24701191-24701241)
chr2 (340-393)||(20278855-20278908)
chr2 (325-381)||(21112228-21112284)
chr2 (332-382)||(24692352-24692402)
chr2 (325-382)||(15950844-15950901)
chr2 (325-380)||(24287828-24287882)
chr2 (325-379)||(35140838-35140892)
chr2 (325-382)||(21857907-21857964)
chr2 (239-295)||(19692773-19692829)
chr2 (325-360)||(3764277-3764312)
chr2 (325-360)||(16275660-16275695)
chr2 (326-357)||(22942997-22943028)
chr2 (325-382)||(42386970-42387027)
chr2 (12-167)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (1-203)||(7107-7309)
scaffold0433 (239-295)||(7015-7071)
[»] chr5 (43 HSPs)
chr5 (1-203)||(24695471-24695673)
chr5 (1-203)||(18569868-18570070)
chr5 (1-201)||(19714503-19714703)
chr5 (1-197)||(19707223-19707419)
chr5 (15-198)||(27347497-27347679)
chr5 (11-197)||(22547031-22547217)
chr5 (94-203)||(39537962-39538071)
chr5 (18-199)||(17285754-17285935)
chr5 (239-295)||(24695709-24695765)
chr5 (318-382)||(36450478-36450542)
chr5 (319-382)||(29895330-29895393)
chr5 (94-197)||(31886537-31886640)
chr5 (328-382)||(20097456-20097510)
chr5 (18-199)||(17298907-17299088)
chr5 (239-295)||(19714742-19714798)
chr5 (319-382)||(22956931-22956994)
chr5 (319-382)||(25528421-25528484)
chr5 (1-137)||(18807039-18807175)
chr5 (1-90)||(39538701-39538790)
chr5 (239-295)||(19707462-19707518)
chr5 (239-295)||(27347722-27347778)
chr5 (325-382)||(21866247-21866304)
chr5 (325-381)||(20378716-20378772)
chr5 (319-357)||(26871292-26871330)
chr5 (87-177)||(33477389-33477479)
chr5 (239-287)||(18570108-18570156)
chr5 (240-295)||(39537870-39537925)
chr5 (325-379)||(24963093-24963147)
chr5 (326-357)||(5446723-5446754)
chr5 (325-360)||(11811760-11811795)
chr5 (326-357)||(11950936-11950967)
chr5 (325-360)||(12178906-12178941)
chr5 (326-357)||(15791233-15791264)
chr5 (326-357)||(17950712-17950743)
chr5 (325-360)||(26087675-26087710)
chr5 (326-357)||(31513916-31513947)
chr5 (325-360)||(33843170-33843205)
chr5 (326-357)||(36382501-36382532)
chr5 (326-357)||(37007173-37007204)
chr5 (324-357)||(7789073-7789106)
chr5 (85-153)||(11479420-11479489)
chr5 (319-359)||(7259912-7259952)
chr5 (325-357)||(37578887-37578919)
[»] scaffold0657 (2 HSPs)
scaffold0657 (1-203)||(993-1195)
scaffold0657 (239-296)||(900-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-203)||(25995-26197)
scaffold0186 (240-295)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-201)||(5531-5731)
scaffold0063 (239-287)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (20-201)||(230365-230545)
scaffold0008 (239-295)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (139-203)||(8446-8510)
scaffold0176 (239-295)||(8546-8602)
[»] scaffold0600 (1 HSPs)
scaffold0600 (319-382)||(8213-8276)
[»] scaffold0327 (1 HSPs)
scaffold0327 (319-382)||(17263-17326)
[»] scaffold0320 (1 HSPs)
scaffold0320 (319-382)||(4140-4203)
[»] scaffold0155 (1 HSPs)
scaffold0155 (319-382)||(20750-20813)
[»] scaffold0132 (1 HSPs)
scaffold0132 (319-382)||(31095-31158)
[»] scaffold0357 (1 HSPs)
scaffold0357 (324-382)||(8544-8602)
[»] scaffold0243 (1 HSPs)
scaffold0243 (324-382)||(16754-16812)
[»] scaffold0203 (1 HSPs)
scaffold0203 (239-295)||(23769-23825)
[»] scaffold1818 (1 HSPs)
scaffold1818 (319-382)||(86-149)
[»] scaffold0551 (1 HSPs)
scaffold0551 (319-382)||(5237-5300)
[»] scaffold0183 (1 HSPs)
scaffold0183 (319-382)||(30660-30723)
[»] scaffold0326 (2 HSPs)
scaffold0326 (239-295)||(16523-16579)
scaffold0326 (170-203)||(16615-16648)
[»] scaffold0306 (1 HSPs)
scaffold0306 (319-382)||(17869-17932)
[»] scaffold0114 (1 HSPs)
scaffold0114 (319-382)||(31832-31895)
[»] scaffold0001 (1 HSPs)
scaffold0001 (319-382)||(98842-98905)
[»] scaffold0019 (1 HSPs)
scaffold0019 (319-381)||(19579-19642)
[»] scaffold0478 (1 HSPs)
scaffold0478 (328-382)||(314-368)
[»] scaffold0023 (2 HSPs)
scaffold0023 (325-382)||(131564-131621)
scaffold0023 (325-382)||(144620-144677)
[»] scaffold0004 (1 HSPs)
scaffold0004 (325-382)||(192499-192556)
[»] scaffold0705 (1 HSPs)
scaffold0705 (239-295)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (239-295)||(8944-9000)
[»] scaffold0441 (1 HSPs)
scaffold0441 (319-382)||(9268-9332)
[»] scaffold0582 (1 HSPs)
scaffold0582 (325-382)||(5133-5190)
[»] scaffold0565 (2 HSPs)
scaffold0565 (239-293)||(10202-10256)
scaffold0565 (153-184)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (259-300)||(1-42)
[»] scaffold0362 (1 HSPs)
scaffold0362 (319-360)||(1866-1907)
[»] scaffold0044 (1 HSPs)
scaffold0044 (325-382)||(74425-74482)
[»] scaffold0364 (1 HSPs)
scaffold0364 (319-358)||(285-324)
[»] scaffold0393 (1 HSPs)
scaffold0393 (319-357)||(3736-3774)
[»] scaffold0125 (1 HSPs)
scaffold0125 (325-359)||(11474-11508)
[»] scaffold0605 (1 HSPs)
scaffold0605 (325-382)||(7074-7131)
[»] scaffold0389 (1 HSPs)
scaffold0389 (325-382)||(1933-1990)
[»] scaffold0056 (1 HSPs)
scaffold0056 (325-382)||(12188-12245)
[»] scaffold0014 (1 HSPs)
scaffold0014 (325-358)||(185846-185879)
[»] scaffold0170 (1 HSPs)
scaffold0170 (243-295)||(5878-5930)
[»] scaffold0138 (1 HSPs)
scaffold0138 (324-360)||(10400-10436)
[»] scaffold0107 (1 HSPs)
scaffold0107 (319-359)||(202-242)
[»] scaffold2162 (1 HSPs)
scaffold2162 (325-360)||(111-146)
[»] scaffold0029 (1 HSPs)
scaffold0029 (326-357)||(22791-22822)
[»] scaffold0435 (1 HSPs)
scaffold0435 (319-353)||(14563-14597)
[»] scaffold0031 (1 HSPs)
scaffold0031 (323-365)||(29509-29551)
[»] scaffold0032 (1 HSPs)
scaffold0032 (102-174)||(92194-92267)
[»] scaffold0046 (1 HSPs)
scaffold0046 (325-353)||(38786-38814)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6110266 - 6110064
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110266 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 6110167  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110166 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 6110067  T
Q  201 tgt 203  Q
    |||    
T  6110066 tgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10572597 - 10572799
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572597 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 10572696  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572697 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 10572796  T
Q  201 tgt 203  Q
    |||    
T  10572797 tgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15600889 - 15601091
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600889 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 15600988  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15600989 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 15601088  T
Q  201 tgt 203  Q
    |||    
T  15601089 tgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15607434 - 15607636
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607434 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 15607533  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15607534 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 15607633  T
Q  201 tgt 203  Q
    |||    
T  15607634 tgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13211504 - 13211305
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211504 cagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 13211405  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211404 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13248809 - 13248607
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13248809 cagtctacctacataatagtctctatgctttaatgttatcccacttctcaacaaagcttgactacgaatactttgagaatagtttccttatgtttaatgg 13248710  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248709 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 13248610  T
Q  201 tgt 203  Q
    |||    
T  13248609 tgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16482488 - 16482688
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  16482488 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgtttaatgg 16482587  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 16482687  T
Q  201 t 201  Q
    |    
T  16482688 t 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17781123 - 17781319
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781123 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 17781222  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781223 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 10579360 - 10579556
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579360 cagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 10579459  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579460 ggtctcacaattaagttatacttaatgttccatttaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18522865 - 18522665
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  18522865 cagtctacctacataatagtctctatgcttaaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaatgg 18522766  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522765 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18522666  T
Q  201 t 201  Q
    |    
T  18522665 t 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15357591 - 15357793
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  15357591 cagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatgg 15357690  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15357691 ggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 15357790  T
Q  201 tgt 203  Q
    |||    
T  15357791 tgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 8490674 - 8490488
Alignment:
Q  17 tagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490674 tagtctctatgctttaatgatatcccacttctcaacaaagcttgactacagatactttgagaatagtttccttatgtttaatggggtctcacaattaagt 8490575  T
Q  117 tatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490574 tatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18520177 - 18519980
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   || |||||||||||||||||||||| ||    
T  18520177 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggat---ttaagaatagtttccttatgtttaacgg 18520081  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18519981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 19089750 - 19089946
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||    
T  19089750 cagtctacctacataatagtctctatgatttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttcattatgtttaaagg 19089849  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19089850 ggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 17200189 - 17200389
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||| ||||||||||| |||||||||| ||    
T  17200189 cagtctacccacataatagtctctatgctttaatgatatcacacatctcaataaagcttaactacggatactttaagaatagtttcattatgtttaaagg 17200288  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200289 ggtatcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 17200388  T
Q  201 t 201  Q
    |    
T  17200389 t 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 15342224 - 15342407
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  15342224 cagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatgg 15342323  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 184  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  15342324 ggtctcacaattaagttatacttaatgttccattaaacgaacaaactattctagggactttattattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 13517013 - 13516813
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||| ||    
T  13517013 cagtctacccacataatagtctctgtgctttaatgatatcctacttctcaataaagcttgactacagatactttaagaatcgtttccttatgtttaacgg 13516914  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516913 ggtctcacaattaagttatacttaatgttccatgaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 13516814  T
Q  201 t 201  Q
    |    
T  13516813 t 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 18640792 - 18640953
Alignment:
Q  42 cacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacgga 141  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18640792 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgga 18640891  T
Q  142 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640892 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 32056906 - 32057101
Alignment:
Q  2 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggg 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||| |||||||||| |||    
T  32056906 agtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagtttgactacggacactttaagaatagtttctttatgtttaacggg 32057005  T
Q  102 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32057006 gtcttacaataaagttatacttgatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 1647526 - 1647726
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||| | |||||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||||||| | |||||||||||||||||||| ||    
T  1647526 cagtctatccacataatagtctctatgctttaattatatcccttttctcaataaagcttgattacggatactttaaaaatagtttccttatgtttaacgg 1647625  T
Q  101 ggtctcacaattaag----ttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 196  Q
    |||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647626 ggtctcacaattaagttaattatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 1647725  T
Q  197 g 197  Q
    |    
T  1647726 g 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 16200313 - 16200128
Alignment:
Q  15 aatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 114  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| |||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||    
T  16200313 aatagtctccatgctttaatgatatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttaatggggtctcacaattaa 16200214  T
Q  115 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200213 gttatacataatgttccattaaacgaactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 29925163 - 29924971
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    ||||||||| ||| |||||||||||||||| |||||| ||| |||||||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29925163 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29925064  T
Q  111 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29925063 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 29974316 - 29974124
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    ||||||||| ||| |||||||||||||||| |||||| ||| |||||||||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  29974316 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29974217  T
Q  111 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    |||| |||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29974216 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 16200619 - 16200434
Alignment:
Q  15 aatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 114  Q
    ||||||||  |||||||||||| |||||||||| ||| ||| |||||||||| ||||||| |||||| | |||||||||||| ||| |||||||||||||    
T  16200619 aatagtcttcatgctttaatgacatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttattggagtctcacaattaa 16200520  T
Q  115 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200519 gttatacataatgttccattaaacggactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 24253394 - 24253589
Alignment:
Q  2 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggg 101  Q
    |||||||| ||||||||||||||||||||||||| || | |||||  ||| |||  ||||| ||  ||||||| |||||||| ||||||||||| |||||    
T  24253394 agtctaccgacataatagtctctatgctttaatgttacctcactttacaataaattttgaccacatatactttaagaatagtgtccttatgtttgatggg 24253493  T
Q  102 g-tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 196  Q
    | |||||| ||||||| |||||||||||||||| ||||| || | |||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  24253494 gatctcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggactttattattttgaagtaaaacaaaatcaataaagaaat 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17136561 - 17136465
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaa 97  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  17136561 cagtctacccacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 8608465 - 8608391
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagatgatgtccat 393  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8608465 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagattaagtccat 8608391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 11183731 - 11183657
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagatgatgtccat 393  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  11183731 aaaggtgttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagattaagtccat 11183657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 12557342 - 12557279
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12557342 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 12557279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 14890874 - 14890933
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14890874 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 14890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 15599551 - 15599610
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15599551 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 15599610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 8806623 - 8806561
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8806623 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 8806561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 18534820 - 18534758
Alignment:
Q  139 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534820 ggactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 319 - 381
Target Start/End: Complemental strand, 21610071 - 21610009
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21610071 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 21610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 6110028 - 6109972
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 6109972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 8490452 - 8490396
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 13248571 - 13248515
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 13248515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 12477318 - 12477381
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12477318 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatgaaatgcatggtgag 12477381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 30093659 - 30093713
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30093659 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 30093713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 13211267 - 13211211
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 13211211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 18640989 - 18641045
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 23285923 - 23285983
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23285923 aaagtttttacgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 23285983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 319 - 379
Target Start/End: Original strand, 14885606 - 14885666
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  14885606 aaagtttttatgaatgaaagaatgtatgcatgattatgctaaagaacatggaatgcatggt 14885666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 10579603 - 10579653
Alignment:
Q  245 acaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10579603 acaaagtcaaacccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 15607672 - 15607729
Alignment:
Q  239 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaaca 15607729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  156 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 15351237 - 15351293
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15351293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 15357829 - 15357885
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 16482727 - 16482782
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaaca 16482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 17200427 - 17200483
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  17200427 catgctacaaagccaaacccaatcaacatagattggctattagggcttactccaaca 17200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 10572840 - 10572890
Alignment:
Q  245 acaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  10572840 acaaagtcaaacccaatcaatataggttggctattagggcttattccaaca 10572890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 1647768 - 1647825
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaacat 1647825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 15601127 - 15601184
Alignment:
Q  239 catgatacaaagccaaacccaatcaa-tatagattggctattagggcttattccaaca 295  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaaca 15601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 13516775 - 13516719
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaaca 13516719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 15682951 - 15683007
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  15682951 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 15683007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 17781358 - 17781414
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  17781358 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaaca 17781414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 19089985 - 19090041
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||||    
T  19089985 catgatataaaaccaaactcaatcaatatagattggctattagggcttactccaaca 19090041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 9552850 - 9552908
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||||  ||||||||    
T  9552850 ttttatgaatgaatgcatgtatgcatgataatgctaaagtacatagaatatatggtgag 9552908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 8203360 - 8203413
Alignment:
Q  329 tgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||| |||| || | |||||||||    
T  8203360 tgaatgaatgcatgtatgcatgattatgctaaagtacatagagtacatggtgag 8203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 14420577 - 14420520
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| | ||||||||| |||| |||| |||||||||    
T  14420577 tttatgaatgaatgcatgtatgcatggtgatgctaaagtacatagaatacatggtgag 14420520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 15622742 - 15622702
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  15622742 aaagtttttatgaatgaatgcatgtatgcatgattatgcta 15622702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18510885 - 18510829
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18510829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18522626 - 18522570
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||  ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18522570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 18534719 - 18534671
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggctta 18534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 25265814 - 25265779
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  25265814 tttatgaatgaatgcatgtatgcatgattatgctaa 25265779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 13109591 - 13109629
Alignment:
Q  344 atgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13109591 atgcatgattatgctaaggaacatggaatgcatggtgag 13109629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 41000564 - 41000510
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||    
T  41000564 tttacgaatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggt 41000510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 41009346 - 41009292
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||    
T  41009346 tttacgaatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggt 41009292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 15697936 - 15697879
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||| ||||||||||||||| ||||||||||||||| |||| |||| |||| ||||    
T  15697936 tttatgcatgaatgcatgtatggatgattatgctaaagtacatagaatacatgatgag 15697879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 15912191 - 15912135
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtg 380  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||  |||||||    
T  15912191 gttttatgaatgaatg-atgtatgcatgattatgctaaaaaacatagaaaacatggtg 15912135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 5957444 - 5957475
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  5957444 ttatgaatgaatgcatgtatgcatgattatgc 5957475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 10720542 - 10720577
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  10720542 tttatgaatgaatgcatgtatgcatggttatgctaa 10720577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 37263296 - 37263327
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  37263296 ttatgaatgaatgcatgtatgcatgattatgc 37263327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 46373923 - 46373892
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  46373923 ttatgaatgaatgcatgtatgcatgattatgc 46373892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 3677805 - 3677771
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  3677805 ttttatggatgaatgcatgtatgcatgattatgct 3677771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 14396407 - 14396445
Alignment:
Q  327 tatgaatgaatgcatgtatgcatgattatgctaaagaac 365  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  14396407 tatgaatgaatacatgtaggcatgattatgctaaagaac 14396445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 30014376 - 30014342
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  30014376 ttttatggatgaatgcatgtatgcatgattatgct 30014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 41433969 - 41433935
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  41433969 ttttatggatgaatgcatgtatgcatgattatgct 41433935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 70432 - 70395
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatg 356  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  70432 aaagtttttatgaatgaatgcatgtatgcatgtttatg 70395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 7095804 - 7095861
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||  |||| |||| |||||||||    
T  7095804 tttatgaatgaatgcatgtatgtatgataatgctcaattacatagaatacatggtgag 7095861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 18960552 - 18960588
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaa 361  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  18960552 tttatgaatggatgcatgcatgcatgattatgctaaa 18960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 199; Significance: 1e-108; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2326 - 2528
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2326 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 2425  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2426 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 2525  T
Q  201 tgt 203  Q
    |||    
T  2526 tgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11217 - 11419
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11217 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 11316  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11317 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 11416  T
Q  201 tgt 203  Q
    |||    
T  11417 tgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 2564 - 2620
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 11455 - 11511
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 19926765 - 19926967
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926765 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 19926864  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926865 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 19926964  T
Q  201 tgt 203  Q
    |||    
T  19926965 tgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26970665 - 26970463
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26970665 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgtttaatgg 26970566  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970565 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 26970466  T
Q  201 tgt 203  Q
    |||    
T  26970465 tgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 55612885 - 55612683
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  55612885 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgtttaatgg 55612786  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612785 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 55612686  T
Q  201 tgt 203  Q
    |||    
T  55612685 tgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 868799 - 868597
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  868799 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaacgg 868700  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  868699 ggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 868600  T
Q  201 tgt 203  Q
    |||    
T  868599 tgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5707522 - 5707320
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707522 cagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 5707423  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707422 ggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 5707323  T
Q  201 tgt 203  Q
    |||    
T  5707322 tgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26963842 - 26963640
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26963842 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgtttaatgg 26963743  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963742 ggtctcacaattaagttatatttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 26963643  T
Q  201 tgt 203  Q
    |||    
T  26963642 tgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18262414 - 18262214
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18262414 cagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacgg 18262315  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18262314 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacgaaacaaaatcaataaagaaatgcct 18262215  T
Q  201 t 201  Q
    |    
T  18262214 t 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5714150 - 5713948
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714150 cagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 5714051  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714050 ggtctcacaattaagttatacttaatgttccattaaatgggctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 5713951  T
Q  201 tgt 203  Q
    |||    
T  5713950 tgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10621338 - 10621540
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10621338 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatgg 10621437  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621438 gctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 10621537  T
Q  201 tgt 203  Q
    |||    
T  10621538 tgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10628417 - 10628619
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10628417 cagtctacctacataatagtctctatgctttaataatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatgg 10628516  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628517 gctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 10628616  T
Q  201 tgt 203  Q
    |||    
T  10628617 tgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18269275 - 18269070
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18269275 cagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacgg 18269176  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-----aaaatcaataaagaaa 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||    
T  18269175 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaacaaaatcaataaagaaa 18269076  T
Q  196 tgcctt 201  Q
    ||||||    
T  18269075 tgcctt 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 28393139 - 28393339
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  28393139 cagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaatgg 28393238  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28393239 ggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaatgcct 28393338  T
Q  201 t 201  Q
    |    
T  28393339 t 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 4426609 - 4426808
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||    
T  4426609 cagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtt-ccttatgtttaacgg 4426707  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4426708 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 4426807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 8845401 - 8845215
Alignment:
Q  5 ctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtc 104  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  8845401 ctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacgggatc 8845302  T
Q  105 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845301 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 8858365 - 8858179
Alignment:
Q  5 ctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtc 104  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| ||    
T  8858365 ctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacgggatc 8858266  T
Q  105 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858265 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 88 - 203
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  88 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  188 taaagaaatgccttgt 203  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 20311491 - 20311299
Alignment:
Q  4 tctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggt 103  Q
    |||||| ||| |||||||||||||||||||||||||| |||||| ||| |||||||||| ||  ||||||| | || ||| |||||||||||||||||||    
T  20311491 tctacccacaaaatagtctctatgctttaatgatatctcacttcacaataaagcttgacaacaaatactttaaaaacagtgtccttatgtttaatggggt 20311392  T
Q  104 ctcacaattaagttata-cttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 195  Q
    ||||||||||||||||| ||||||| |||||| |||  | |||||||| || | ||||||||||||| |||||||||||||||||||||||||    
T  20311391 ctcacaattaagttataccttaatgctccattgaacatattaactattataagtactttattattttaaaacaaaacaaaatcaataaagaaa 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 5668140 - 5668327
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggata--ctttgagaatagtttccttatgtttaatggggtctcac 108  Q
    ||||||||||||||||| ||||||| |||| |  ||| ||| |||||||||||||  |||  |||| |||||| | |||||   ||||||||| ||||||    
T  5668140 acataatagtctctatgatttaatgttatctcttttcacaataaagcttgactacaaatatactttaagaataatgtcctttcatttaatggg-tctcac 5668238  T
Q  109 aattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
     ||||| | | |||||||| |||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5668239 gattaaatcacacttaatgctccattaaatagactaattattctagagactttattattttgaaacaaaacaaaatcaacaaagaaatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 10677560 - 10677753
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||| ||| |||||||| |||| || ||| | |  ||||||||||||||||||||| |||||| | || ||  |||||||||    
T  10677560 cagtctacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaagaataatatcatttcgtttaatgg 10677657  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    | |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||||    
T  10677658 g-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaatg 10677753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 10891200 - 10891393
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||| ||| |||||||| |||| || ||| | |  ||||||||||||||||||||| |||||| | || ||  |||||||||    
T  10891200 cagtctacccacataatagtctatatactttaatgttatctcatttcacta--aagcttgactacggatactttaagaataatatcatttcgtttaatgg 10891297  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    | |||| | ||||||| |||||||||| ||||||| || |||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||||    
T  10891298 g-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaatg 10891393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 5616414 - 5616215
Alignment:
Q  4 tctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagc--ttgactacggatactttgagaatagtttccttatgtttaatggg 101  Q
    ||||| |||||||||||||| |||||||| | |||||||| |||  || ||| |  ||||| ||||||||||| |||||| | ||||   |||||| |||    
T  5616414 tctacatacataatagtctcaatgctttattaatatcccaattcataataaaacctttgacaacggatactttaagaataatgtcctctagtttaacggg 5616315  T
Q  102 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
     |||||  ||| ||| | |||||||||||||  |||  |||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  5616314 atctcatgatttagtcagacttaatgttccaagaaatagactaattattttaggaactttattattttgaaacaaaacaaaatgaataaagaaatgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 35223760 - 35223576
Alignment:
Q  3 gtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgggg 102  Q
    ||||||| |||||||||||| |||||||||||| |||||   ||  ||| |||||||||||||| ||||||| |||||| | |||||  |||| | |       
T  35223760 gtctacccacataatagtctatatgctttaatgttatccttttttacaataaagcttgactacgaatactttaagaataatgtcctttcgttttacg--- 35223664  T
Q  103 tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
           ||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35223663 -------attaagtcacacttaatgctccattaaacagactaattattctagggactttattattttaaaacaaaacaaaatcaacaaagaaatg 35223576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 19927003 - 19927060
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 19927060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 3841888 - 3841944
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3841888 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 3841944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 5713912 - 5713856
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 5713856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 379
Target Start/End: Complemental strand, 14883831 - 14883771
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14883831 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 14883771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 26963604 - 26963548
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 26970427 - 26970371
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 3386324 - 3386387
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3386324 aaaggtttaataaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 3386387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 20556204 - 20556141
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20556204 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatcgaatgcatggtgag 20556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 5707284 - 5707228
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 10621576 - 10621632
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 10621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17142372 - 17142429
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaacat 17142429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 55612650 - 55612594
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 4426847 - 4426905
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacatt 297  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaacatt 4426905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 28393380 - 28393434
Alignment:
Q  241 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18269032 - 18268976
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 18268976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 16725986 - 16726049
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||    
T  16725986 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaaggatatggaatatatggtgag 16726049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 39074278 - 39074346
Alignment:
Q  87 cttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctag 154  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||||||    
T  39074278 cttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttat 288  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 26218480 - 26218536
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||| ||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  26218480 tttatggatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 26218536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 21454152 - 21454319
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||||| ||| ||||| ||| || |||| || ||| ||| |||| |||||||  |||| ||| | |||| | || ||||  ||||||||||||||  |    
T  21454152 acataataatctttatgcattattgttatctcatttcacaataaagtttgactatagatattttaaaaataatgtcattataattaatggggtctcaata 21454251  T
Q  111 ttaagttatactt-aatgttccattaaacggactaactattctagggactttattattttgaaacaaa 177  Q
    |||||| | | || ||||||||||||| |  ||||||||||||| | ||||||||| |||||||||||    
T  21454252 ttaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 15079813 - 15079851
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  15079813 aaagtttttatgaatgaatgcatgtatgcatgattatgc 15079851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctatta 280  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 14736118 - 14736175
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  14736118 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 14736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 8845166 - 8845118
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 8858130 - 8858082
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 15077507 - 15077547
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  15077507 aaagtttttatgaatgcatgcatgtatgcatgattatgcta 15077547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctatt 279  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  94 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 153  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 1888796 - 1888838
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacat 367  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||    
T  1888796 tttatggatgaatgcatgtatgcatgataatgctaaagtacat 1888838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 378
Target Start/End: Original strand, 15900744 - 15900778
Alignment:
Q  344 atgcatgattatgctaaagaacatggaatgcatgg 378  Q
    |||||||||||| ||||||||||||||||||||||    
T  15900744 atgcatgattatactaaagaacatggaatgcatgg 15900778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 20311261 - 20311207
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 293  Q
    ||||||||||||||||| ||||| |||| |||||||||||||  ||||| |||||    
T  20311261 catgatacaaagccaaatccaatgaatacagattggctattacagcttactccaa 20311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 9187128 - 9187096
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatg 356  Q
    ||||||||||||||||||||||||||| |||||    
T  9187128 ttttatgaatgaatgcatgtatgcatgtttatg 9187096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 24700006 - 24699958
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    ||||||||||| |||||  ||||||||||||||||| |||| |||||||    
T  24700006 catgatacaaaaccaaattcaatcaatatagattggttattcgggctta 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 39074218 - 39074270
Alignment:
Q  14 taatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacg 66  Q
    |||||||||| |||||||||||||||| |||||| ||| ||||  ||||||||    
T  39074218 taatagtctccatgctttaatgatatctcacttcacaataaagtatgactacg 39074270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18252232 - 18252030
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252232 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 18252133  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252132 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18252033  T
Q  201 tgt 203  Q
    |||    
T  18252032 tgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18532519 - 18532721
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532519 cagtctatctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 18532618  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532619 ggtctcacaattaagttatacttaatgttccattaaacgaactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18532718  T
Q  201 tgt 203  Q
    |||    
T  18532719 tgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27131414 - 27131616
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  27131414 cagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacaaatactttgagaatagtttccttatgtttaatgg 27131513  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131514 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 27131613  T
Q  201 tgt 203  Q
    |||    
T  27131614 tgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21171238 - 21171438
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||    
T  21171238 cagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttcaacgg 21171337  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21171338 ggtctcacaattaagttatatttaatgttccatgaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 21171437  T
Q  201 t 201  Q
    |    
T  21171438 t 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 27310582 - 27310782
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| || |     
T  27310582 cagtctacccacataatagtctctatgctttaatgatattccacttctcaataaagcttgactactgatactttaagaatagtttccttatgttcaacgt 27310681  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27310682 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 27310781  T
Q  201 t 201  Q
    |    
T  27310782 t 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16359040 - 16359240
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| || |||||| |||||||||||||||||||||| ||    
T  16359040 cagtctacccacataatagtctctatgctttaatgatattccatttctcaataaagcttgactagggttactttaagaatagtttccttatgtttaacgg 16359139  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359140 ggtctcacaattaagttattcttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 16359239  T
Q  201 t 201  Q
    |    
T  16359240 t 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 36816638 - 36816834
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||| | ||||||||||||| ||    
T  36816638 cagtctatccacataatagtctctatgctttaatggtatcccacttctcaataaagcttgactatggatactttaagaataatgtccttatgtttaacgg 36816737  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
     ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36816738 agtctcacaattaatttatacttaatgttccattaaacagacgaactattctagggacttcattattttgaaacaaaacaaaatcaataaagaaatg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 3855924 - 3856126
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| || |||||||||| |||||||||| |||||||||||| ||| |||| ||||||||  ||| ||| |||||| | ||||||||||||||||    
T  3855924 cagtctacccacgtaatagtctccatgctttaataatatcccacttcacaataaagtttgactacaaatattttaagaataatgtccttatgtttaatgg 3856023  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  3856024 ggtctcacaattaagttatacttaatgttccattaaacgggctaactattctagggactttgttattttgaaacaaaacaaaataaacaaagaaatgcct 3856123  T
Q  201 tgt 203  Q
    |||    
T  3856124 tgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22657226 - 22657429
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||| | |||| ||||||||||||||||||||||||| || |||  || ||||||||||||  || ||||| ||||| || ||||||||||||| ||    
T  22657226 cagtctatccacatgatagtctctatgctttaatgatatctcatttcagaataaagcttgactagagacactttaagaattgtgtccttatgtttaaagg 22657325  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaac-aaaatcaataaagaaatgcc 199  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |    
T  22657326 ggtctcacaattaagttatatttaatgttccattaaacagactaactattctaggaactttattattttgaaacaaaacaaaaatcaataaagaaatgtc 22657425  T
Q  200 ttgt 203  Q
    ||||    
T  22657426 ttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 197
Target Start/End: Original strand, 27277564 - 27277756
Alignment:
Q  3 gtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgggg 102  Q
    ||||||| ||||||||||||||||||||||||| ||||||  ||| ||| ||||| |||||||||||||||| |||||| | || ||  | ||||   ||    
T  27277564 gtctacccacataatagtctctatgctttaatgttatcccttttcacaataaagcctgactacggatactttaagaataatgtcatttcggttaa-aagg 27277662  T
Q  103 tctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||| | ||||||| | || ||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  27277663 tctcgcgattaagtcacac-taatgctccgttaaatggactaattattctagggacgttattattttgaaacaaaacaaaaacaacaaagaaatg 27277756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 12006554 - 12006712
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||| | |||||| | ||||||| |||||| |||| ||  || ||||||||||| ||  ||| | |||| | ||||||||||| |||||||||||| |    
T  12006554 acataacaatctctaagttttaatgttatccctcttcacactaaggcttgactacgaatgttttaataataatgtccttatgtttcatggggtctcacga 12006653  T
Q  111 ttaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 169  Q
    |||||  | ||||||| ||||||||||  ||||||||||||||||||||||||||||||    
T  12006654 ttaaggcacacttaatattccattaaatagactaactattctagggactttattatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 12014292 - 12014457
Alignment:
Q  4 tctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggt 103  Q
    |||||| ||||||| |||| || ||||||||  |||||| |||| ||  ||||||| |||||||||  ||| ||||||   || |||||||||||||| |    
T  12014292 tctacccacataatggtctttacgctttaatcgtatccctcttcacactaaagcttaactacggatgttttaagaataacatcattatgtttaatgggat 12014391  T
Q  104 ctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 169  Q
    || || ||||| ||| ||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  12014392 ctaacgattaatttacacttaatattccattaaacggactatgtattctagtgactttattatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 18251992 - 18251935
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 18251935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 18532757 - 18532814
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 18532814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 1958111 - 1958052
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1958111 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgtatggtgag 1958052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 22430213 - 22430150
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22430213 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaaaatggaatgcatggtgag 22430150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27310821 - 27310877
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 9917927 - 9918106
Alignment:
Q  5 ctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtc 104  Q
    ||||| ||||| || ||||||||||| |||| ||||||||||  ||| ||||||| ||||  |||| ||| |||||| | ||||||| ||||||||  ||    
T  9917927 ctaccgacatagtattctctatgcttcaatgctatcccacttaacaataaagcttaactatagatattttaagaataatgtccttatatttaatgga-tc 9918025  T
Q  105 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 191  Q
    ||   || |||||||||||||||||| |||||||  |||||       || ||||||||||||||| ||||||||||||||||||||    
T  9918026 tcgtgatcaagttatacttaatgttcgattaaacaaactaa------aagtgactttattattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 16359280 - 16359336
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 35071870 - 35071822
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacat 367  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35071870 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacat 35071822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 2387437 - 2387380
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| |||||||||    
T  2387437 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtgag 2387380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 21171479 - 21171535
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaaca 21171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 14818077 - 14818115
Alignment:
Q  344 atgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14818077 atgcatgattatgctaaagaacatggaatgcatggtgag 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 13453098 - 13453041
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||| ||||||||||||||||||||| ||||||||| |||| |||| |||||||||    
T  13453098 tttatggatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggtgag 13453041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  128 ttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||| ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 36816881 - 36816926
Alignment:
Q  242 gatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||    
T  36816881 gatacaaagccaaacccaatcaatatagattgaatattagggctta 36816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 3856164 - 3856220
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||| ||||||||||||| || |||||||||||||||| || |||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaaca 3856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 6202951 - 6202991
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  6202951 aaagtttttatgaatgaatgcatgtatgcatgattatgcta 6202991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 22657469 - 22657521
Alignment:
Q  243 atacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||| |||||||    
T  22657469 atacaaagccaaactcaatcaatatatattggctattaaggcttactccaaca 22657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27131652 - 27131704
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 31542224 - 31542170
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||    
T  31542224 tttacgaatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggt 31542170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  96 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 173  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  96 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaa 173  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| | ||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 27168368 - 27168335
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||||||||||||||||||||||||||||||    
T  27168368 tttatgaatgaatgcatgtatgcatgattatgct 27168335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||| |||||  ||| || |||||||||||||||||||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 5635645 - 5635676
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  5635645 ttatgaatgaatgcatgtatgcatgattatgc 5635676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 31554422 - 31554387
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  31554422 tttatgaatgaatgcatgtatgcatggttatgctaa 31554387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 382
Target Start/End: Complemental strand, 19371081 - 19371051
Alignment:
Q  352 ttatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||    
T  19371081 ttatgctaaagaacatggaatgcatggtgag 19371051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 356
Target Start/End: Original strand, 2341491 - 2341519
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatg 356  Q
    |||||||||||||||||||||||||||||    
T  2341491 atgaatgaatgcatgtatgcatgattatg 2341519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18490 - 18288
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18490 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 18391  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18390 ggtctcacaattaagttatacttaatgttcaattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18291  T
Q  201 tgt 203  Q
    |||    
T  18290 tgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18252 - 18196
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29327986 - 29327784
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327986 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 29327887  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327886 ggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 29327787  T
Q  201 tgt 203  Q
    |||    
T  29327786 tgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11536067 - 11536269
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11536067 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatgg 11536166  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536167 ggtctcacaattaagttgtacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 11536266  T
Q  201 tgt 203  Q
    |||    
T  11536267 tgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11542985 - 11543187
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11542985 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgtttaatgg 11543084  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11543085 ggtctgacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcat 11543184  T
Q  201 tgt 203  Q
    |||    
T  11543185 tgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15152645 - 15152445
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  15152645 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccgtatgtttaacgg 15152546  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15152545 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaatgcct 15152446  T
Q  201 t 201  Q
    |    
T  15152445 t 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15148344 - 15148144
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||    
T  15148344 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaacgg 15148245  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15148244 ggtctcacaattaagttatacttaatgttcaatcaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaatgcct 15148145  T
Q  201 t 201  Q
    |    
T  15148144 t 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18561209 - 18561009
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||||||| ||    
T  18561209 cagtctacccacataatagtctctatgctttaatgatatcccacctctcaataaagcttgactacagatactttaagaatagtttcctaatgtttaacgg 18561110  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561109 ggtctcacagttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 18561010  T
Q  201 t 201  Q
    |    
T  18561009 t 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12751028 - 12750828
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| |     
T  12751028 cagtctatccacataatagtctctatgctttaatgatatccaacttctcaataaagcttgactacggatactttaagaatagtttctttatgtttaacga 12750929  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750928 ggtctcacaattaagttatacttaatgtttcattaaacggactaactattctagggactttattactttgaaacaaaacaaaatcaataaagaaatgcct 12750829  T
Q  201 t 201  Q
    |    
T  12750828 t 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 12738738 - 12738542
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||       
T  12738738 cagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaacaa 12738639  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12738638 ggtctcacaattaagttataattaatgtttcattaaacaaactaactattctagggactttattattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 18257857 - 18258047
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||||||||| ||||| ||| || ||||| ||||  ||| ||| |||||||||||||||||| |||||| | ||||| ||||||||||||||||||||    
T  18257857 acataatagtctttatgcattattgttatcctacttaacaaaaaaacttgactacggatactttaagaataatgtccttgtgtttaatggggtctcacaa 18257956  T
Q  111 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257957 ttaagtcatacttaatgttccattaaacagactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 13392338 - 13392157
Alignment:
Q  15 aatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 114  Q
    ||||||||||||| ||||||| ||||||  ||| ||| |||| |||||||  |||||||| |||||| | |||||   ||||||||| |||||| |||||    
T  13392338 aatagtctctatgttttaatgttatcccttttcacaataaagtttgactattgatactttaagaataatgtcctttcatttaatggg-tctcacgattaa 13392240  T
Q  115 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    || | |||||||| |||||||| | |||||| | ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  13392239 gtcacacttaatgctccattaagcagactaattgttctaggaactttattattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 23884747 - 23884809
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23884747 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 23884809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 2365096 - 2364917
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||| ||| |||| |||||||||||| ||||||| |||| || ||| ||| || | ||||||||| ||| ||| |||||| | || ||  |||||||||    
T  2365096 cagtcgacccacatgatagtctctatgttttaatgttatctcatttcacaataagg-ttgactacgaatattttaagaataatgtcatttagtttaatgg 2364998  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaa 181  Q
    | |||||| ||||||  | |||||||||||||||| |  |||||| |||||||| |||||||||||||||||||| |||||    
T  2364997 gttctcacgattaagccacacttaatgttccattagaaagactaattattctagagactttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 2653275 - 2653332
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaacat 2653332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 12738499 - 12738442
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaacat 12738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 11543223 - 11543279
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 11543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 8812741 - 8812678
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8812741 aaagtttttatgaatgaatgcatgtatgcatgtttatgctgaagaacatggaatgcatggtgag 8812678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 13268533 - 13268596
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  13268533 aaagtttttatgaatgaatgcttgtatgcatgattatgctaaggaacatggaatgcatggtgag 13268596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 39111905 - 39111819
Alignment:
Q  110 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||  ||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39111905 attaagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt-ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 7396381 - 7396221
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    ||||||||||||||||||||||||   |||  | ||| ||  || ||||||||||  ||  ||| |||||| ||| |||||||||||| ||||||||  |    
T  7396381 acataatagtctctatgctttaatatcatcgtatttcacactaaggcttgactacatatgttttaagaataattttcttatgtttaatagggtctcaaga 7396282  T
Q  111 ttaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttg 170  Q
    |||||| ||||||||||||||| ||||| | |||||||||||||| ||| || ||||||||    
T  7396281 ttaagtcatacttaatgttccatttaaatgaactaactattctagcgacatttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 11536305 - 11536361
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaaca 11536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 12750789 - 12750733
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaaca 12750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 15152406 - 15152350
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 15152350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 29327745 - 29327690
Alignment:
Q  240 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 29327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 3132791 - 3132748
Alignment:
Q  86 ccttatgtttaatggggtctcacaattaagttatacttaatgtt 129  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  3132791 ccttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 13392085 - 13392030
Alignment:
Q  240 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaaca 13392030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 10234244 - 10234179
Alignment:
Q  88 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 153  Q
    |||||||||||||  |||||  ||||||||||| |||||| | |||||||||||||||||||||||    
T  10234244 ttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 18258087 - 18258143
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||||||| |||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaaca 18258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 12586656 - 12586623
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||||||||||||||||||||||||||||||    
T  12586656 tttatgaatgaatgcatgtatgcatgattatgct 12586623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 15186569 - 15186512
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  15186569 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 15186512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 16146571 - 16146628
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  16146571 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 16146628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 29082996 - 29082939
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  29082996 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 29082939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  171 aaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 18560969 - 18560913
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||| ||||||||| |||||||| || | |||||||| |||||||    
T  18560969 catgatacaaagccaagcccaatcaacatagattgcctttaagggcttactccaaca 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 567505 - 567540
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  567505 tttatgaatgaatgcatgtatgcatggttatgctaa 567540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 358
Target Start/End: Original strand, 804907 - 804942
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    |||||||| |||||||||||||||||||||||||||    
T  804907 gttttatggatgaatgcatgtatgcatgattatgct 804942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 840452 - 840417
Alignment:
Q  322 ggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||||||| |||||||||||||||||||||||||||    
T  840452 ggttttatcaatgaatgcatgtatgcatgattatgc 840417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 847628 - 847593
Alignment:
Q  322 ggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||||||| |||||||||||||||||||||||||||    
T  847628 ggttttatcaatgaatgcatgtatgcatgattatgc 847593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 1205632 - 1205597
Alignment:
Q  322 ggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||||||| |||||||||||||||||||||||||||    
T  1205632 ggttttatcaatgaatgcatgtatgcatgattatgc 1205597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 5207438 - 5207473
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  5207438 tttatgaatgaatgcatgtatgcatggttatgctaa 5207473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 9463225 - 9463194
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  9463225 ttatgaatgaatgcatgtatgcatgattatgc 9463194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 16399976 - 16400007
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  16399976 ttatgaatgaatgcatgtatgcatgattatgc 16400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 27974550 - 27974585
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  27974550 tttatgaatgaatgcatgtatgcatggttatgctaa 27974585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 3430657 - 3430691
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  3430657 ttttatggatgaatgcatgtatgcatgattatgct 3430691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 372
Target Start/End: Original strand, 13491232 - 13491278
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaat 372  Q
    ||||||||| ||||||| ||||||||||||||||||  |||||||||    
T  13491232 ttatgaatggatgcatgcatgcatgattatgctaaaatacatggaat 13491278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 16293791 - 16293825
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  16293791 ttttatggatgaatgcatgtatgcatgattatgct 16293825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 13833767 - 13833710
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| ||||  ||||| |||| |||| |||| ||||    
T  13833767 tttatgaatgaatgcatgtatgcatggttattataaagtacatagaatacatgatgag 13833710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 34136899 - 34136936
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatg 356  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  34136899 aaagtttttatgaatgaatgcatgtatgcatgtttatg 34136936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 4950004 - 4950040
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaa 361  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  4950004 tttatgaatgaatgcatgtatacatggttatgctaaa 4950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27381257 - 27381459
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  27381257 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgtttaatgg 27381356  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381357 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 27381456  T
Q  201 tgt 203  Q
    |||    
T  27381457 tgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27471640 - 27471842
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  27471640 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgtttaatgg 27471739  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471740 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 27471839  T
Q  201 tgt 203  Q
    |||    
T  27471840 tgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 17684474 - 17684674
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17684474 cagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgtttaacgg 17684573  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 17684673  T
Q  201 t 201  Q
    |    
T  17684674 t 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29309092 - 29308890
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309092 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 29308993  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308992 gctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 29308893  T
Q  201 tgt 203  Q
    |||    
T  29308892 tgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 29316052 - 29315850
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316052 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 29315953  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315952 gctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 29315853  T
Q  201 tgt 203  Q
    |||    
T  29315852 tgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16566325 - 16566525
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||    
T  16566325 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgtttaacgg 16566424  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 16566524  T
Q  201 t 201  Q
    |    
T  16566525 t 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17691445 - 17691647
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  17691445 cagtctacctacataatagtctttatgctttaatgatatcccacttctcactaaagcttgactacggatactttaagaatagtttccttatgtttaatgg 17691544  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17691545 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaagaaaacaaaatcaataaagaaatgcct 17691644  T
Q  201 tgt 203  Q
    |||    
T  17691645 tgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 188982 - 189182
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  188982 cagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacaaatactttaagaatagtttccttatgtttaatgg 189081  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  189082 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 189181  T
Q  201 t 201  Q
    |    
T  189182 t 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25537164 - 25537364
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  25537164 cagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacgaatactttaagaatagtttccttatgtttaacgg 25537263  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25537264 ggtctcacaataaagttatacttaatgttccattaaacggactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 25537363  T
Q  201 t 201  Q
    |    
T  25537364 t 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 11651925 - 11651725
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  11651925 cagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactactgatacttttagaatagtttccttatttttaatgg 11651826  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11651825 ggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaatgcct 11651726  T
Q  201 t 201  Q
    |    
T  11651725 t 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 13359286 - 13359474
Alignment:
Q  13 ataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaatt 112  Q
    ||||||||||||| ||||||||| | ||||| ||| ||| |||| ||||||||||||||||| | |||| | |  ||||||||||||| || |||| |||    
T  13359286 ataatagtctctacgctttaatgttgtcccatttcacaataaaggttgactacggatactttaaaaataatgtttttatgtttaatggagtttcacgatt 13359385  T
Q  113 aagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  13359386 aagttatacttaatgctccattaagcgaactaactattctagggactttattattttgaaacaaaacaaaataaataaataaatgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 20457232 - 20457291
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20457232 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgtatggtgag 20457291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20553592 - 20553755
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||| | ||| |||||||||||  |||| |||||| ||| |||  || ||||||||| |||| |||||| | | ||||| ||||||||    
T  20553592 cagtctaccaacataaaaatctttatgctttaattttatctcacttcacaataaaaattcactacggatgctttaagaataatattcttatatttaatgg 20553691  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatt 164  Q
    | |||||| |||||||  |||||||| || |||||||||||||| |||| |||| |||||||||    
T  20553692 gatctcacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactttatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 27072060 - 27072119
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27072060 gttttatgaatgaatgcgtgtatgcatgattatgctaaagaacatggaatgcatggtgag 27072119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 22326164 - 22326110
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22326164 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 22326110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27381495 - 27381551
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381495 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 27381551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27471878 - 27471934
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471878 catgaaacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 27471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 29308854 - 29308798
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29308798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 29315814 - 29315758
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29315758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 621123 - 621186
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  621123 aaagtttttatgaatgaatgcatgtatgcatgtttatgctgaagaacatggaatgcatggtgag 621186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 20056094 - 20056157
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  20056094 aaagtttttatgaatgaatgcatgtatgcatgtttatgctgaagaacatggaatgcatggtgag 20056157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 17684712 - 17684768
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaaca 17684768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 8510115 - 8509941
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgggg-tctcaca 109  Q
    |||||||||||| |||| ||||||| |||| || |||  || ||||||| |||||  ||||||| | ||||   |||| || |||||||||| ||||| |    
T  8510115 acataatagtctttatgttttaatgctatctcatttcataataaagcttaactacatatactttaataatatcatcctcatatttaatgggggtctcata 8510016  T
Q  110 attaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaat 184  Q
    |||||||  ||| ||||||||||| |||  |||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510015 attaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 11651684 - 11651630
Alignment:
Q  241 tgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 180
Target Start/End: Complemental strand, 27925946 - 27925772
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||||||||| | ||||| |||| ||| |||||||  || |||| |||||||  |||||||| |||||| ||| |||  ||||||||| ||||||| |    
T  27925946 acataatagtctttgtgcttcaatgctataccacttccaaataaagtttgactagagatactttaagaataattttctttagtttaatggagtctcacga 27925847  T
Q  111 ttaagt--tatactta---atgttccattaaacggactaactattctagggactttattattttgaaacaaaaca 180  Q
    ||||||   | |||||   ||||||| ||||||  ||||  ||||||| ||||||||||||||||||||||||||    
T  27925846 ttaagtcacacacttaattatgttccgttaaacatactagttattctaaggactttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17850500 - 17850663
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| | |||||||||| ||| ||| |||| |||   ||||| ||| |||||||||||| ||||| ||| |||||||| ||||| | |||||| |    
T  17850500 cagtctacccatataatagtctatatacttgaatgttatttgacttcacaa-aaagcttgactatggataatttaagaatagtgtccttgtttttaattg 17850598  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 165  Q
    | | ||||||||||||  ||| ||||||||||  ||||  |||| ||||| ||||||||||||||    
T  17850599 gatatcacaattaagtcttacataatgttccaacaaacaaactagctattatagggactttatta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 19715944 - 19715888
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  19715944 ttatgtatgaatgcatgtatgcatgattatgctaaagaatgtggaatgcatggtgag 19715888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 25537405 - 25537461
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaaca 25537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 28270127 - 28270071
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  28270127 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 28270071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 28305094 - 28305038
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  28305094 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 28305038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 28348877 - 28348821
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  28348877 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 28348821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  141 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 196  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 25504303 - 25504361
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| ||||  ||||||||    
T  25504303 ttttatgaatgaatgcatgtatgcatgataatgctaaagtacatagaatatatggtgag 25504361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 25700616 - 25700559
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||| ||||||||||||||||||||| ||||||||| |||| |||| |||||||||    
T  25700616 tttatggatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggtgag 25700559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 13359512 - 13359560
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctattaggactta 13359560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 189221 - 189282
Alignment:
Q  239 catgatacaaagccaaacccaatcaata---tagattggctattagggcttattccaacatt 297  Q
    ||||||||||||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  189221 catgatacaaagccaaacccaatcaatatactagattgattattagggcttactccaacatt 189282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 18219276 - 18219333
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  18219276 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 18219333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 23981844 - 23981901
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| |||||||||    
T  23981844 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacatggtgag 23981901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 9142926 - 9142957
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  9142926 ttatgaatgaatgcatgtatgcatgattatgc 9142957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 16636423 - 16636388
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  16636423 tttatgaatgaatgcatgtatgcatggttatgctaa 16636388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 27056632 - 27056667
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  27056632 tttatgaatgaatgcatgtatgcatggttatgctaa 27056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 16394484 - 16394526
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattag 281  Q
    |||||||||||| ||||| |||||||||||||||| |||||||    
T  16394484 catgatacaaagtcaaactcaatcaatatagattgtctattag 16394526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 18112953 - 18112896
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||  |||| |||| |||||||||    
T  18112953 tttatgaatgaatgcatgtatgtatgataatgctcaaatacatagaatacatggtgag 18112896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 22259925 - 22259990
Alignment:
Q  122 ttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 187  Q
    ||||||||  |||||| ||||||  |||| |||||| |||||||||||| |||| |||||||||||    
T  22259925 ttaatgttatattaaatggactagttattttagggagtttattattttgcaacataacaaaatcaa 22259990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 191; Significance: 1e-103; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6939 - 7141
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  6939 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatag 7038  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7039 ggtctcacagttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 7138  T
Q  201 tgt 203  Q
    |||    
T  7139 tgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 13955 - 14157
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13955 cagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgtttaatgg 14054  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14055 ggtctcacagttaagttatacttaatgttccattaaacggactaactattgtagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 14154  T
Q  201 tgt 203  Q
    |||    
T  14155 tgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 7177 - 7233
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 7233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 14193 - 14249
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-103; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21940867 - 21940665
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940867 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 21940768  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  21940767 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaaatcaataaagaaatgcat 21940668  T
Q  201 tgt 203  Q
    |||    
T  21940667 tgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 28555084 - 28554885
Alignment:
Q  2 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  28555084 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatacttttagaatagtttcattatgtttaatggg 28554985  T
Q  102 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  28554984 gtctcacaattaagttatacttaatgttccattaaacggactaactattttaggtattttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22171689 - 22171491
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  22171689 cagtctacctacataatagtctctatgctttaatgatattccacttctcaataaagcttgactacggatactttgagaatagtttc--tatgtttaatgg 22171592  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  22171591 ggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaataaaacaaaatcaataaggaaatgcct 22171492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 6094322 - 6094129
Alignment:
Q  4 tctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggt 103  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||| |||||    
T  6094322 tctacccatataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaaaaatagtttccttatgtttaacggggt 6094223  T
Q  104 ctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094222 ctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 24642851 - 24642655
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  24642851 cagtctacccacataatagtctctatactttaatgatatctcacttctcaataaagcttgactacgaatactttaagaatagtttccttatgtttaacgg 24642752  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24642751 ggtctcacaattaagttatacttaatgttccattaaacggactaacaattctagggactttatgattttgaaacaaaacaaaatcaataaagaaatg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  70 actttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattatttt 169  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  170 gaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 20741049 - 20740986
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741049 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 20740986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 20744569 - 20744506
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20744569 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 20744506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 20736011 - 20735952
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatgg 378  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20736011 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatgg 20735952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 22160921 - 22160975
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22160921 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 22160975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 22070164 - 22070107
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaacat 22070107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 21940629 - 21940573
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 6094087 - 6094031
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 22171452 - 22171396
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaaca 22171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 24642608 - 24642556
Alignment:
Q  243 atacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24642608 atacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 24642556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 32002040 - 32001989
Alignment:
Q  331 aatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32002040 aatgaatgcatgtatgcatgattatgctaaagaacatggaacgcatggtgag 32001989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 38232382 - 38232570
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||| |||||| | ||||||||||   |||| |||||  ||| |||| ||||||||  ||||||| |||||| | |  ||| |||||||||    
T  38232382 cagtctacccacaaaatagtttttatgctttaagactatctcactttacaataaagtttgactacaaatactttaagaatactatt-ttacgtttaatgg 38232480  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 191  Q
     || |||  |||||||||||| |||   |  ||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  38232481 agtgtcatgattaagttatacctaaaaatttattaaacagactaactattctagaga-tttattattttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 28554847 - 28554791
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaaca 28554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 6666015 - 6665956
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagat 384  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| |||||||||||    
T  6666015 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtgagat 6665956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 6673677 - 6673618
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgagat 384  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| |||||||||||    
T  6673677 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtgagat 6673618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 32872857 - 32873019
Alignment:
Q  12 cataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 111  Q
    |||||||||||||||||||| ||| ||||||||||| ||| ||| ||| |||||  ||| ||| | | || | ||  | | || |||| | |||||||||    
T  32872857 cataatagtctctatgctttgatgttatcccacttcacaataaatcttaactacaaatattttaatagtattgtcactcttttcaatgagatctcacaat 32872956  T
Q  112 taagttatacttaatgttccat-taaacggactaactattctagggactttattattttgaaa 173  Q
    ||||| ||||||||||||| || |||| |||  ||||||| || |||||||||||||||||||    
T  32872957 taagtcatacttaatgttctatataaatggatgaactattataaggactttattattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 2375085 - 2375027
Alignment:
Q  124 aatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaa 182  Q
    ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375085 aatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  102 gtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttatta 165  Q
    ||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 24709308 - 24709347
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaa 364  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24709308 tttatgaatgagtgcatgtatgcatgattatgctaaagaa 24709347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 22104979 - 22105013
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||||||||||||||||||||||||||||||||||    
T  22104979 tttatgaatgaatgcatgtatgcatgattatgcta 22105013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 19837686 - 19837639
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaat 372  Q
    |||||||||||||||||||||||||| ||||| ||||| |||| ||||    
T  19837686 tttatgaatgaatgcatgtatgcatgcttatgttaaagtacatagaat 19837639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 2375000 - 2374947
Alignment:
Q  242 gatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||| |||||||||| | |||   ||||||||||||||||||||    
T  2375000 gatacaaagccaaatccaatcaatacatatttattattagggcttattccaaca 2374947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  258 caatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 39843389 - 39843441
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatg 377  Q
    ||||| |||||||||||||||||||| |||| |||||| |||| |||| ||||    
T  39843389 tttattaatgaatgcatgtatgcatggttatactaaagtacattgaatacatg 39843441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 21330253 - 21330455
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330253 cagtccacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 21330352  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330353 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 21330452  T
Q  201 tgt 203  Q
    |||    
T  21330453 tgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18796708 - 18796506
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||| |||| ||| |||||| | |||||||||| || |     
T  18796708 cagtctacccacataatagtctcaatgctttaatgatataccacttcacaataaagcttgactacagataatttaagaataatatccttatgttaaaaga 18796609  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||| |||    
T  18796608 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttgttattttgaaacaaaacaaaataaacaaataaattcct 18796509  T
Q  201 tgt 203  Q
    |||    
T  18796508 tgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 18620002 - 18619807
Alignment:
Q  5 ctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtc 104  Q
    ||||| |||||||||||| |||||||||||  ||||||  ||| ||| |||| ||||| || |||||||| |||||| | ||||| ||||||||||| ||    
T  18620002 ctacccacataatagtctatatgctttaatattatcccttttcacaataaagtttgaccacagatactttaagaataatatccttttgtttaatggg-tc 18619904  T
Q  105 tcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||| |||||||| | |||||||| |||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18619903 tcataattaagtcacacttaatgctccattaaacagactaattattatagggactttattattttgaaacaaaacaaaatcaacaaagaaattcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  58 ttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggga 157  Q
    ||||||| ||||||||| |||||| |||||||  |||||||| | |||||  ||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  158 ctttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 20978084 - 20977957
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||||||||||||||||||| ||||||| |||||| ||  |||||||||||||||||  ||| |||||| ||||||||| ||||||||| |||||  |    
T  20978084 acataatagtctctatgctttagtgatatctcacttcacattaaagcttgactacggatgttttaagaataatttccttatttttaatgggatctcatga 20977985  T
Q  111 ttaagttatacttaatgttccattaaac 138  Q
    |||| |||| ||||||||||||||||||    
T  20977984 ttaaattattcttaatgttccattaaac 20977957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 21330493 - 21330550
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 21330550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 36270368 - 36270199
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||| |||||||| ||| |||||||| |||||| |||| ||  ||||||||| |||||||  ||| |||||||| || || |||||||||     
T  36270368 cagtctacccacacaatagtctttatactttaatgttatccctcttcacactaaagcttgattacggatgttttaagaatagtgtcattgtgtttaatga 36270269  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacgga-ctaactattctagggactttattatttt 169  Q
     ||||||| ||||||| | ||||||  || |||| ||   | ||||||||||||||||||||||||||||    
T  36270268 tgtctcacgattaagtcacacttaacatttcatttaagtaaactaactattctagggactttattatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 25494122 - 25494065
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  25494122 tttatgaatgaatgcatgtatgcatgattatgctaaagtacatagaatacatggtgag 25494065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 18822275 - 18822115
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    |||||||| ||| | ||||||||||||||||||||||  |  ||||||||| |||  ||  ||| |||||||| ||||| |||||||||| ||||||| |    
T  18822275 acataataatctatctgctttaatgatatcccacttcaaactaaagcttgattacatatgttttaagaatagtgtccttgtgtttaatggtgtctcacga 18822176  T
Q  111 ttaagttatacttaa-tgttcca-ttaaacggactaactattctagggactttattatttt 169  Q
    |||||  | |||||| | ||||| ||||||| |||||| ||||||  ||||||||||||||    
T  18822175 ttaagccacacttaatttttccatttaaacgaactaacaattctatagactttattatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 24701241 - 24701191
Alignment:
Q  332 atgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  24701241 atgaatgtatgtatgcatgcttatgctaaagaacatggaatgcatggtgag 24701191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 20278855 - 20278908
Alignment:
Q  340 atgtatgcatgattatgctaaagaacatggaatgcatggtgagatgatgtccat 393  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||    
T  20278855 atgtatgcatgattatgctacagaacatggaatgcatggtgagattaagtccat 20278908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 21112284 - 21112228
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||  ||||||||    
T  21112284 tttatggatgaatgcatgtatgcatgattatgctaaagaacatagaaaacatggtga 21112228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 382
Target Start/End: Complemental strand, 24692402 - 24692352
Alignment:
Q  332 atgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  24692402 atgaatgtatgtatgcatctttatgctaaagaacatggaatgcatggtgag 24692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 15950844 - 15950901
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| |||| ||||    
T  15950844 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatgatgag 15950901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 24287882 - 24287828
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtg 380  Q
    |||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  24287882 tttatgaatgaatgcatgtatgcatggttatgct-aagaacatagaatacatggtg 24287828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 35140892 - 35140838
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||    
T  35140892 tttacgaatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggt 35140838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 21857907 - 21857964
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||| ||||||||||||||| ||||||||||| |||| |||| |||| ||||    
T  21857907 tttatgaatggatgcatgtatgcatggttatgctaaagtacatagaatacatgatgag 21857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 19692773 - 19692829
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||| |||||| |||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaaca 19692829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 3764277 - 3764312
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  3764277 tttatgaatgaatgcatgtatgcatggttatgctaa 3764312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 16275695 - 16275660
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  16275695 tttatgaatgaatgcatgtatgcatggttatgctaa 16275660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 22943028 - 22942997
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  22943028 ttatgaatgaatgcatgtatgcatgattatgc 22942997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 42387027 - 42386970
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||| ||||| ||||| ||| |||| |||| || ||||||    
T  42387027 tttatgaatgaatgcatgtatgtatgataatgctcaagtacatagaatacaaggtgag 42386970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 36802664 - 36802820
Alignment:
Q  12 cataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaat 111  Q
    ||||||| ||| |||||||||||| ||||||||||  ||   || ||||| |||||||  ||| |||||| | || || |||||||||   |||  ||||    
T  36802664 cataataatctatatgctttaatgttatcccactttacactgaatcttgattacggatgttttaagaataatgtcattgtgtttaatgatatcttgcaat 36802763  T
Q  112 taagttatacttaatgttcca-ttaaacggactaactattctagggactttattatt 167  Q
    ||||| | | ||||| ||||| ||||||| | ||||||||| | |||||||||||||    
T  36802764 taagtaacatttaatattccatttaaacgaattaactattcaaaggactttattatt 36802820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 183; Significance: 7e-99; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7309 - 7107
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  7309 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatacttttagaatagtttcattatgtttaatgg 7210  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7209 ggtctcacaattaagttatacttaatgttctattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatacct 7110  T
Q  201 tgt 203  Q
    |||    
T  7109 tgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 7071 - 7015
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 7e-99; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 24695471 - 24695673
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  24695471 cagtctacctacataatagtctctatgctttattgatatctcacttctcaataaagcttgactacggatacttttagaatagtttcattatgtttaatgg 24695570  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695571 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 24695670  T
Q  201 tgt 203  Q
    |||    
T  24695671 tgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 18569868 - 18570070
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| ||    
T  18569868 cagtctaccaacataatagtctttatgctttaatgatattccacttctcaataaagcttgactacggatactttaagagtagtttccttatgtttaacgg 18569967  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18569968 ggtctcacaattaagttatacttaatgttcaattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 18570067  T
Q  201 tgt 203  Q
    |||    
T  18570068 tgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19714503 - 19714703
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||| ||||||| |||||||||||||| ||    
T  19714503 cagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgtttaacgg 19714602  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19714603 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaatgcct 19714702  T
Q  201 t 201  Q
    |    
T  19714703 t 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 19707223 - 19707419
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||| ||||||| |||||||||||||| ||    
T  19707223 cagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgtttaacgg 19707322  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19707323 ggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaatg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 27347497 - 27347679
Alignment:
Q  15 aatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaa 114  Q
    ||||||||||||||||||||| ||||||  ||| ||| |||||||||||||  ||||||| |||||| | |||||  |||||||||| |||||| |||||    
T  27347497 aatagtctctatgctttaatgttatcccttttcacaataaagcttgactacatatactttaagaataatgtcctttcgtttaatggg-tctcacgattaa 27347595  T
Q  115 gttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgc 198  Q
    || | |||||||| |||||||||| || ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  27347596 gtcacacttaatgctccattaaacagattaattattctaaggactttattattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 22547031 - 22547217
Alignment:
Q  11 acataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaa 110  Q
    ||||||||||||||||  ||||||| |||| |||||| ||| |||| |||||| || ||||||| | |||| | ||| ||| ||||||| | |||||| |    
T  22547031 acataatagtctctatattttaatgttatctcacttcacaataaagtttgactgcgaatactttaaaaataatgtccatatatttaatgagatctcacga 22547130  T
Q  111 ttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 197  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||| ||| |||||||||| |||||| |||||    
T  22547131 ttaagttatacttaatgttccattaaaccgactaactattatagcggttttattattttaaaataaaacaaaatgaataaataaatg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  94 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 193  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  194 aatgccttgt 203  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 17285754 - 17285935
Alignment:
Q  18 agtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 117  Q
    ||||| |||||||||||  ||||||| ||| ||| |||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17285754 agtctatatgctttaatactatcccaattcacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17285853  T
Q  118 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 199  Q
    | ||||||||||||||||||| |||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285854 acacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 24695709 - 24695765
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 24695765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 36450542 - 36450478
Alignment:
Q  318 caaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36450542 caaaagttttatgaatgaatgcatgtatgcatgattatgctaaggaacatggaatgcatggtgag 36450478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 29895393 - 29895330
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29895393 aaagtttttatgaatgaatgcatgtttgcatgattatgctaaagaacatggaatgcatggtgag 29895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  94 ttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 193  Q
    ||||||| ||||||| |||||||  ||||| |||||| |||||| | ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  194 aatg 197  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 20097456 - 20097510
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20097456 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 20097510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 17298907 - 17299088
Alignment:
Q  18 agtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagtt 117  Q
    ||||| |||||||||||  ||||||||||  ||| |||| | ||||| | ||||||| |||||| | || ||  ||||| | |||| |||| |||||||     
T  17298907 agtctatatgctttaatactatcccacttaacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17299006  T
Q  118 atacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 199  Q
      ||||||||||||||||| |||||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299007 gcacttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 19714742 - 19714798
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 22956931 - 22956994
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22956931 aaagtttttctgaacgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 22956994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 25528484 - 25528421
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25528484 aaagtttttgtgaatgaatgcatgtatgcatgtttatgctaaagaacatggaatgcatggtgag 25528421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18807039 - 18807175
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttcc-ttatgtttaatg 99  Q
    |||||||||  ||||||||||||||||||||| || ||||  ||||| ||| || |||||||||  |||||||| |||||| | ||| |||| |||||||    
T  18807039 cagtctacccgcataatagtctctatgctttattgttatcttacttcacaataacgcttgactatagatactttaagaataatgtccattat-tttaatg 18807137  T
Q  100 gggtctcacaattaagttatacttaatgttccattaaa 137  Q
    | ||||||| ||||||| | ||||||||||||||||||    
T  18807138 gtgtctcacgattaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39538790 - 39538701
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttcctta 90  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||| |||| ||||| ||| |||||||| ||||||    
T  39538790 cagtctacccacataatagtcttcatgctttaatgatatcccacttcacaataaagcttaactatggatattttaagaatagtgtcctta 39538701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 19707462 - 19707518
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 19707518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 27347722 - 27347778
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 21866247 - 21866304
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  21866247 tttatgaatgaatgcatgtatgcatggttatgctaaagaacatagaatacatggtgag 21866304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 20378772 - 20378716
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtga 381  Q
    |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  20378772 tttatgaatgaatgcatgtatgcatggttatgctaaagtacatagaatacatggtga 20378716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 26871330 - 26871292
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26871330 aaaggttttatgaatgaatgcatgtatgcatgattatgc 26871292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 33477389 - 33477479
Alignment:
Q  87 cttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaa 177  Q
    |||||| |||||| |||||||| ||||  | | |||||||| |||||||| | | ||||||||| || |||||||||||||||||||||||    
T  33477389 cttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 18570108 - 18570156
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctattagagctta 18570156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  240 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 24963093 - 24963147
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggt 379  Q
    |||| ||||||||||||||||||||||| ||||||||| |||| |||| ||||||    
T  24963093 tttacgaatgaatgcatgtatgcatgataatgctaaagtacatagaatacatggt 24963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 5446723 - 5446754
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  5446723 ttatgaatgaatgcatgtatgcatgattatgc 5446754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 11811760 - 11811795
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  11811760 tttatgaatgaatgcatgtatgcatggttatgctaa 11811795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 11950936 - 11950967
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  11950936 ttatgaatgaatgcatgtatgcatgattatgc 11950967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 12178906 - 12178941
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  12178906 tttatgaatgaatgcatgtatgcatggttatgctaa 12178941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 15791233 - 15791264
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  15791233 ttatgaatgaatgcatgtatgcatgattatgc 15791264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 17950743 - 17950712
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  17950743 ttatgaatgaatgcatgtatgcatgattatgc 17950712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 26087675 - 26087710
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  26087675 tttatgaatgaatgcatgtatgcatggttatgctaa 26087710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 31513947 - 31513916
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  31513947 ttatgaatgaatgcatgtatgcatgattatgc 31513916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 33843170 - 33843205
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  33843170 tttatgaatgaatgcatgtatgcatggttatgctaa 33843205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 36382501 - 36382532
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  36382501 ttatgaatgaatgcatgtatgcatgattatgc 36382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 37007173 - 37007204
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  37007173 ttatgaatgaatgcatgtatgcatgattatgc 37007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 7789106 - 7789073
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||| ||||||||||||||||||||||||||    
T  7789106 ttttatggatgaatgcatgtatgcatgattatgc 7789073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 11479489 - 11479420
Alignment:
Q  85 tccttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacggactaactattcta 153  Q
    ||||||||||||||| |||||||||||| |||| | ||||||| || ||||||||  ||||| |||||||    
T  11479489 tccttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 7259912 - 7259952
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||| |||||||||||||||| |||||||||||||| ||||    
T  7259912 aaagtttttatgaatgaatgcgtgtatgcatgattacgcta 7259952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 37578919 - 37578887
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||||||| ||||||||||||||||||||||||    
T  37578919 tttatgaacgaatgcatgtatgcatgattatgc 37578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 179; Significance: 2e-96; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 1195 - 993
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  1195 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttctttatgtttaatgg 1096  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1095 ggtctcacaattaagttatacttaatgtttcattaaacggactaactattttagggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 996  T
Q  201 tgt 203  Q
    |||    
T  995 tgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 957 - 900
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 175; Significance: 4e-94; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25995 - 26197
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25995 cagtctacctacataatagtcgctatgctttaatgatatcccacttttcaataaagcttgactacggatactttgagaatagtttccttatgtttaatgg 26094  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  26095 ggtctcacaattaagttatatttaatgttccattaaatggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaatgtct 26194  T
Q  201 tgt 203  Q
    |||    
T  26195 tgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 26231 - 26286
Alignment:
Q  240 atgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaaca 26286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 5731 - 5531
Alignment:
Q  1 cagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatgg 100  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||||||| ||    
T  5731 cagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacatatactttaagaataatttccttatgtttaacgg 5632  T
Q  101 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  5631 ggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaaataaatcaataaagaaatgcct 5532  T
Q  201 t 201  Q
    |    
T  5531 t 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 5492 - 5444
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggctta 287  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggctta 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 230365 - 230545
Alignment:
Q  20 tctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttat 119  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  230365 tctctatgctttaatgatatcccacttctcaataaatcttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttat 230463  T
Q  120 acttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 201  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  230464 acttaatgttccattaaacggactaactattataagaactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 230584 - 230640
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaaca 230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 8446 - 8510
Alignment:
Q  139 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8446 ggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 8546 - 8602
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaaca 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 8276 - 8213
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8276 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 8213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 17326 - 17263
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17326 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 17263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 4140 - 4203
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4140 aaaggttttatgaatgaatgtatgtatgcatgattatgctaaagaacatggaatgcatggtgag 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 20750 - 20813
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20750 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 20813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 31158 - 31095
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31158 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 31095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 8602 - 8544
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8602 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 8544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 16812 - 16754
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16812 ttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 16754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 23769 - 23825
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 23825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1818 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1818
Description:

Target: scaffold1818; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 86 - 149
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  86 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgaatggtgag 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 5237 - 5300
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5237 aaagtttttatgaatgaatgcatgtatgcataattatgctaaagaacatggaatgcatggtgag 5300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 30723 - 30660
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30723 aaagttttcatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 30660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 16579 - 16523
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579 catgatataaagccaaacccaatcaatatagattggctattagggcttattccaaca 16523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  170 gaaacaaaacaaaatcaataaagaaatgccttgt 203  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 17932 - 17869
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  17932 aaagtttttatgaatgaatgcatgtatgcatgattatgctaaagaacatcaaatgcatggtgag 17869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 31832 - 31895
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31832 aaagtttttacgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatgctgag 31895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 98905 - 98842
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  98905 aaaggtttaataaatgaatgcatgtatgcatgattatgctaaagaacatggaacgcatggtgag 98842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 19579 - 19642
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatga-ttatgctaaagaacatggaatgcatggtga 381  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19579 aaagtttttatgaatgaatgcatgtatgcatgatttatgctaaagaacatggaatgtatggtga 19642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 382
Target Start/End: Original strand, 314 - 368
Alignment:
Q  328 atgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  314 atgaatgaatgcatgtatgcatgattatgctaaagaacatcgaatggatggtgag 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 131564 - 131621
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  131564 tttatgaatgaatgcatgtatgcatggttatgctaaagaacatagaatacatggtgag 131621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 144620 - 144677
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||| |||||||||||||||||||| ||||||||||||| | ||||| |||||||||    
T  144620 tttataaatgaatgcatgtatgcatggttatgctaaagaaaacggaatacatggtgag 144677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 192499 - 192556
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||    
T  192499 tttatgaatgaatgcatgtatgcatgattatgctaaagaacttagaatacatggtgag 192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 41 - 97
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 9000 - 8944
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 9332 - 9268
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgca-tgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  9332 aaagattttatgaatgaatgcatgtatgaaatgattatgccaaagaacatggaatgcatggtgag 9268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 5133 - 5190
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||| |||||||||    
T  5133 tttatgaatgaatgcatgtatgcatgattatgctatagtacatagaatacatggtgag 5190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  239 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 293  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 184
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  153 agggactttattattttgaaacaaaacaaaat 184  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

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Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 1 - 42
Alignment:
Q  259 aatcaatatagattggctattagggcttattccaacattggt 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  1 aatcaatatagattggctattagggcttattccaacagtggt 42  T

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Target: scaffold0362 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 1866 - 1907
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  1866 aaagtttttatgaatgaatgcatgtatgcatgattatgctaa 1907  T

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Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 74425 - 74482
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| ||||||||||||| || || | |||||||||    
T  74425 tttatgaatgaatgcatgtatgcatggttatgctaaagaatatagattacatggtgag 74482  T

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Target: scaffold0364 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 358
Target Start/End: Original strand, 285 - 324
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgct 358  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  285 aaagtttttatgaatgaatgcatgtatgcatgattatgct 324  T

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Target: scaffold0393 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 3774 - 3736
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgc 357  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  3774 aaagtttttatgaatgaatgcatgtatgcatgattatgc 3736  T

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Target: scaffold0125 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 11508 - 11474
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||||||||||||||||||||||||||||||||||    
T  11508 tttatgaatgaatgcatgtatgcatgattatgcta 11474  T

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Target: scaffold0605 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 7074 - 7131
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| |||||| |||| |||| |||| |||| ||||    
T  7074 tttatgaatgaatgcatgtatgcatggttatgcgaaagtacatagaatacatgatgag 7131  T

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Target: scaffold0389 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 1990 - 1933
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    |||||||||||||||||||||||||| ||||| ||||| |||| |||| |||| ||||    
T  1990 tttatgaatgaatgcatgtatgcatggttatggtaaagtacatagaatacatgatgag 1933  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 12245 - 12188
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaaagaacatggaatgcatggtgag 382  Q
    ||||||||||||| |||||||||||| |||| |||||| |||| |||| |||||||||    
T  12245 tttatgaatgaatacatgtatgcatggttatactaaagtacatagaatacatggtgag 12188  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 185846 - 185879
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgct 358  Q
    ||||||||||||||||||||||||||||||||||    
T  185846 tttatgaatgaatgcatgtatgcatgattatgct 185879  T

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Target: scaffold0170 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 5930 - 5878
Alignment:
Q  243 atacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 295  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||| |||||||    
T  5930 atacaaagtcaaactcaatcaatatagattggctattatgacttactccaaca 5878  T

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Target: scaffold0138 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 10436 - 10400
Alignment:
Q  324 ttttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10436 ttttatgaatgaatgcatgtatgcatgtttatgctaa 10400  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 202 - 242
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgattatgcta 359  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  202 aaagtttttatgaatgaaagcatgtatgcatgattatgcta 242  T

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Target: scaffold2162 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold2162
Description:

Target: scaffold2162; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 146 - 111
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgattatgctaa 360  Q
    |||||||||||||||||||||||||| |||||||||    
T  146 tttatgaatgaatgcatgtatgcatggttatgctaa 111  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 22822 - 22791
Alignment:
Q  326 ttatgaatgaatgcatgtatgcatgattatgc 357  Q
    ||||||||||||||||||||||||||||||||    
T  22822 ttatgaatgaatgcatgtatgcatgattatgc 22791  T

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Target: scaffold0435 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 14563 - 14597
Alignment:
Q  319 aaaggttttatgaatgaatgcatgtatgcatgatt 353  Q
    |||| ||||||||||||||||||||||||||||||    
T  14563 aaagtttttatgaatgaatgcatgtatgcatgatt 14597  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 29509 - 29551
Alignment:
Q  323 gttttatgaatgaatgcatgtatgcatgattatgctaaagaac 365  Q
    |||||||||||| ||||||||||| |||| |||||||||||||    
T  29509 gttttatgaatgtatgcatgtatgaatgaatatgctaaagaac 29551  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  102 gtctcacaattaagttatacttaatgttcca-ttaaacggactaactattctagggactttattattttgaaac 174  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

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Target: scaffold0046 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 353
Target Start/End: Complemental strand, 38814 - 38786
Alignment:
Q  325 tttatgaatgaatgcatgtatgcatgatt 353  Q
    |||||||||||||||||||||||||||||    
T  38814 tttatgaatgaatgcatgtatgcatgatt 38786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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