View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16648_low_10 (Length: 248)

Name: NF16648_low_10
Description: NF16648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16648_low_10
NF16648_low_10
[»] chr1 (65 HSPs)
chr1 (1-228)||(18939291-18939518)
chr1 (46-228)||(14872656-14872837)
chr1 (83-231)||(45789595-45789742)
chr1 (83-234)||(5983890-5984040)
chr1 (83-234)||(44915693-44915843)
chr1 (18-231)||(27580019-27580232)
chr1 (46-234)||(21947506-21947694)
chr1 (83-231)||(48750239-48750386)
chr1 (87-231)||(7836687-7836830)
chr1 (83-231)||(23291533-23291680)
chr1 (83-231)||(32395052-32395199)
chr1 (83-231)||(34878169-34878316)
chr1 (63-234)||(24582984-24583154)
chr1 (83-226)||(39888236-39888378)
chr1 (117-231)||(31984249-31984362)
chr1 (1-228)||(47132871-47133101)
chr1 (83-231)||(35484282-35484429)
chr1 (83-231)||(45415612-45415759)
chr1 (85-231)||(10776352-10776497)
chr1 (117-234)||(31317824-31317940)
chr1 (83-228)||(36775604-36775748)
chr1 (63-231)||(44543306-44543473)
chr1 (83-234)||(3228323-3228473)
chr1 (83-228)||(7337557-7337701)
chr1 (99-228)||(15431560-15431688)
chr1 (43-231)||(29738555-29738743)
chr1 (67-231)||(37720040-37720204)
chr1 (46-231)||(49626930-49627114)
chr1 (85-228)||(31919044-31919187)
chr1 (83-204)||(1742335-1742454)
chr1 (125-223)||(4413210-4413307)
chr1 (161-231)||(51373749-51373818)
chr1 (83-228)||(13144706-13144850)
chr1 (83-228)||(19060963-19061107)
chr1 (64-231)||(34412983-34413148)
chr1 (83-223)||(32873763-32873902)
chr1 (83-214)||(51916575-51916701)
chr1 (160-231)||(11462373-11462443)
chr1 (46-224)||(16262877-16263055)
chr1 (120-231)||(16989462-16989572)
chr1 (99-192)||(35461978-35462071)
chr1 (95-203)||(24597242-24597350)
chr1 (83-231)||(49504486-49504633)
chr1 (46-204)||(8211828-8211986)
chr1 (167-234)||(24583284-24583350)
chr1 (95-230)||(25564064-25564198)
chr1 (66-128)||(34528766-34528829)
chr1 (118-227)||(9341815-9341923)
chr1 (83-183)||(26535403-26535503)
chr1 (83-130)||(6217818-6217865)
chr1 (179-234)||(34529224-34529278)
chr1 (46-135)||(27456556-27456646)
chr1 (67-129)||(12635207-12635270)
chr1 (167-230)||(14489410-14489472)
chr1 (83-142)||(41994481-41994540)
chr1 (164-231)||(50377458-50377524)
chr1 (64-141)||(16161872-16161950)
chr1 (102-228)||(32679035-32679160)
chr1 (69-129)||(17337623-17337684)
chr1 (179-228)||(19596354-19596402)
chr1 (202-231)||(27456656-27456685)
chr1 (63-147)||(49648848-49648933)
chr1 (168-228)||(6217717-6217776)
chr1 (179-231)||(21687528-21687579)
chr1 (63-231)||(31692358-31692525)
[»] chr8 (57 HSPs)
chr8 (38-223)||(33347418-33347602)
chr8 (83-231)||(23230696-23230843)
chr8 (83-234)||(5046806-5046956)
chr8 (46-226)||(29617168-29617348)
chr8 (83-231)||(31013497-31013644)
chr8 (63-234)||(471050-471223)
chr8 (43-231)||(7677172-7677360)
chr8 (46-231)||(15344324-15344508)
chr8 (46-231)||(15433389-15433573)
chr8 (46-231)||(15524693-15524877)
chr8 (67-231)||(18890588-18890752)
chr8 (83-231)||(37971336-37971483)
chr8 (83-228)||(17693505-17693650)
chr8 (83-228)||(45445703-45445847)
chr8 (83-231)||(9637298-9637445)
chr8 (83-227)||(20553134-20553277)
chr8 (1-228)||(3673411-3673638)
chr8 (83-231)||(10377742-10377889)
chr8 (38-197)||(14544825-14544985)
chr8 (83-231)||(16928646-16928793)
chr8 (83-227)||(20559637-20559780)
chr8 (83-227)||(20571199-20571342)
chr8 (83-234)||(40211188-40211338)
chr8 (66-223)||(5333464-5333621)
chr8 (46-231)||(16247112-16247297)
chr8 (85-231)||(27110354-27110499)
chr8 (85-226)||(28086706-28086847)
chr8 (63-231)||(1239286-1239453)
chr8 (83-231)||(7883130-7883277)
chr8 (64-231)||(41896550-41896717)
chr8 (46-227)||(14916081-14916261)
chr8 (65-229)||(40618964-40619128)
chr8 (63-231)||(1236586-1236753)
chr8 (83-231)||(42046274-42046421)
chr8 (38-231)||(28897716-28897909)
chr8 (83-231)||(33214560-33214707)
chr8 (83-231)||(25190954-25191103)
chr8 (85-203)||(8443427-8443545)
chr8 (89-231)||(43833885-43834026)
chr8 (83-231)||(14585730-14585877)
chr8 (117-231)||(7198084-7198197)
chr8 (105-231)||(30568210-30568335)
chr8 (63-226)||(34609865-34610031)
chr8 (64-204)||(39657487-39657628)
chr8 (99-231)||(24186550-24186681)
chr8 (83-226)||(29939353-29939495)
chr8 (83-227)||(8826264-8826407)
chr8 (83-231)||(27498255-27498400)
chr8 (83-204)||(26469061-26469182)
chr8 (46-157)||(8981178-8981290)
chr8 (46-231)||(21237805-21237988)
chr8 (148-234)||(35283249-35283334)
chr8 (117-221)||(8867892-8867995)
chr8 (170-234)||(41060149-41060212)
chr8 (160-204)||(41684512-41684556)
chr8 (67-129)||(39450577-39450640)
chr8 (117-228)||(27746989-27747099)
[»] chr2 (65 HSPs)
chr2 (83-227)||(17151484-17151628)
chr2 (1-215)||(4264450-4264664)
chr2 (63-231)||(12554073-12554241)
chr2 (83-231)||(1421737-1421884)
chr2 (83-231)||(33923766-33923913)
chr2 (84-234)||(25508957-25509106)
chr2 (1-227)||(19028810-19029036)
chr2 (63-228)||(4904040-4904205)
chr2 (3-231)||(18763448-18763676)
chr2 (63-231)||(24461483-24461651)
chr2 (42-234)||(37876495-37876687)
chr2 (83-231)||(1415618-1415765)
chr2 (37-228)||(28871683-28871874)
chr2 (83-227)||(33760089-33760232)
chr2 (85-231)||(4778816-4778961)
chr2 (64-231)||(3308986-3309153)
chr2 (83-231)||(10237108-10237255)
chr2 (85-231)||(7646536-7646686)
chr2 (46-228)||(10929688-10929870)
chr2 (85-228)||(9169153-9169295)
chr2 (83-230)||(12677344-12677489)
chr2 (85-234)||(19062236-19062389)
chr2 (85-231)||(27097299-27097443)
chr2 (85-231)||(41694684-41694829)
chr2 (83-228)||(8809341-8809484)
chr2 (99-204)||(31128698-31128803)
chr2 (83-228)||(31788517-31788661)
chr2 (63-228)||(32448511-32448678)
chr2 (83-231)||(7677765-7677912)
chr2 (83-231)||(17249039-17249186)
chr2 (63-230)||(23933512-23933679)
chr2 (85-225)||(29279468-29279607)
chr2 (83-204)||(30399947-30400074)
chr2 (83-231)||(33585627-33585774)
chr2 (83-231)||(38445227-38445374)
chr2 (38-231)||(5427761-5427953)
chr2 (46-234)||(16375962-16376150)
chr2 (1-231)||(43397010-43397241)
chr2 (46-204)||(14423348-14423507)
chr2 (83-204)||(31210525-31210646)
chr2 (65-228)||(36691916-36692079)
chr2 (84-202)||(36943041-36943159)
chr2 (103-231)||(29173609-29173739)
chr2 (37-141)||(36175477-36175582)
chr2 (83-237)||(12646998-12647148)
chr2 (85-196)||(7448310-7448421)
chr2 (117-204)||(17994648-17994735)
chr2 (46-135)||(41327526-41327616)
chr2 (83-228)||(29574523-29574667)
chr2 (100-228)||(11985128-11985255)
chr2 (64-231)||(14955570-14955737)
chr2 (151-227)||(18107646-18107721)
chr2 (83-231)||(37416771-37416918)
chr2 (89-201)||(39310774-39310885)
chr2 (66-231)||(35220368-35220536)
chr2 (46-227)||(28533850-28534031)
chr2 (171-231)||(280946-281006)
chr2 (83-231)||(4041486-4041633)
chr2 (160-228)||(4100474-4100541)
chr2 (167-231)||(6358773-6358836)
chr2 (161-231)||(37994423-37994492)
chr2 (160-227)||(13014819-13014885)
chr2 (85-231)||(14416223-14416369)
chr2 (66-142)||(6358851-6358928)
chr2 (181-234)||(41327898-41327950)
[»] chr7 (49 HSPs)
chr7 (46-228)||(5348486-5348668)
chr7 (1-231)||(42978580-42978810)
chr7 (83-231)||(37837349-37837496)
chr7 (75-218)||(39229058-39229201)
chr7 (83-230)||(12141200-12141346)
chr7 (84-231)||(39171481-39171627)
chr7 (83-231)||(8001437-8001584)
chr7 (1-231)||(45349690-45349920)
chr7 (83-228)||(38798834-38798978)
chr7 (83-231)||(47590364-47590511)
chr7 (83-231)||(48316703-48316850)
chr7 (85-228)||(34899501-34899643)
chr7 (67-234)||(35132983-35133150)
chr7 (85-228)||(19404651-19404793)
chr7 (46-231)||(46700050-46700235)
chr7 (83-228)||(13796823-13796967)
chr7 (83-231)||(48061475-48061622)
chr7 (41-228)||(9977104-9977287)
chr7 (85-231)||(19296925-19297070)
chr7 (83-231)||(39328684-39328828)
chr7 (46-226)||(25255242-25255422)
chr7 (83-223)||(9450036-9450175)
chr7 (83-231)||(22742997-22743144)
chr7 (83-231)||(30756710-30756857)
chr7 (83-231)||(40993210-40993357)
chr7 (64-204)||(28476260-28476400)
chr7 (87-230)||(35665027-35665169)
chr7 (44-225)||(25287083-25287264)
chr7 (63-227)||(26623684-26623849)
chr7 (82-227)||(24770298-24770442)
chr7 (63-226)||(24069290-24069453)
chr7 (45-228)||(41553328-41553511)
chr7 (83-201)||(5792849-5792967)
chr7 (63-214)||(38880485-38880637)
chr7 (118-230)||(48930795-48930906)
chr7 (82-228)||(28044650-28044795)
chr7 (83-228)||(29617593-29617738)
chr7 (63-231)||(11343842-11344009)
chr7 (83-143)||(22087370-22087430)
chr7 (45-190)||(3224342-3224487)
chr7 (1-190)||(4530047-4530236)
chr7 (83-231)||(4999920-5000067)
chr7 (83-157)||(3394529-3394603)
chr7 (83-157)||(24350803-24350875)
chr7 (45-147)||(41553753-41553856)
chr7 (118-225)||(46244149-46244255)
chr7 (168-226)||(49148011-49148068)
chr7 (179-228)||(28407812-28407860)
chr7 (117-193)||(26610707-26610783)
[»] chr5 (37 HSPs)
chr5 (83-227)||(6216948-6217092)
chr5 (83-231)||(41630552-41630699)
chr5 (83-228)||(13421983-13422127)
chr5 (83-231)||(34945443-34945590)
chr5 (83-231)||(38597847-38597994)
chr5 (85-231)||(13007281-13007426)
chr5 (83-227)||(10722811-10722954)
chr5 (83-234)||(25980208-25980357)
chr5 (85-231)||(9113616-9113761)
chr5 (80-228)||(31391647-31391794)
chr5 (67-231)||(28540797-28540961)
chr5 (83-231)||(38007408-38007554)
chr5 (64-231)||(14211257-14211424)
chr5 (37-228)||(26878003-26878193)
chr5 (64-228)||(2979200-2979364)
chr5 (83-231)||(15571536-15571684)
chr5 (83-231)||(24229675-24229822)
chr5 (83-231)||(35850849-35850996)
chr5 (82-228)||(14726355-14726500)
chr5 (46-223)||(35920895-35921072)
chr5 (46-227)||(37986008-37986189)
chr5 (83-231)||(8088103-8088250)
chr5 (83-234)||(6012026-6012176)
chr5 (85-231)||(26825482-26825627)
chr5 (46-231)||(41749338-41749523)
chr5 (103-226)||(14082292-14082414)
chr5 (87-224)||(7930231-7930367)
chr5 (99-204)||(11976852-11976957)
chr5 (88-228)||(7036274-7036413)
chr5 (87-231)||(19103358-19103501)
chr5 (84-231)||(39567321-39567467)
chr5 (121-226)||(11192467-11192571)
chr5 (42-231)||(8096389-8096577)
chr5 (160-230)||(11867776-11867845)
chr5 (82-148)||(32691019-32691085)
chr5 (66-226)||(8514548-8514708)
chr5 (173-234)||(10332435-10332495)
[»] chr6 (44 HSPs)
chr6 (71-230)||(20225890-20226049)
chr6 (71-230)||(22119874-22120033)
chr6 (82-231)||(23128669-23128817)
chr6 (65-228)||(127702-127863)
chr6 (83-231)||(29255337-29255484)
chr6 (83-228)||(14801879-14802023)
chr6 (85-228)||(33053062-33053204)
chr6 (82-223)||(528249-528389)
chr6 (64-231)||(546062-546230)
chr6 (67-231)||(30493567-30493731)
chr6 (83-228)||(30608409-30608553)
chr6 (83-231)||(606256-606403)
chr6 (83-231)||(3913465-3913612)
chr6 (103-203)||(4010430-4010530)
chr6 (83-231)||(12170520-12170667)
chr6 (103-228)||(7515096-7515220)
chr6 (1-204)||(6957119-6957323)
chr6 (46-228)||(9380037-9380219)
chr6 (46-228)||(26588366-26588548)
chr6 (83-223)||(31852092-31852231)
chr6 (1-204)||(34018529-34018733)
chr6 (83-228)||(29319771-29319916)
chr6 (86-231)||(67892-68036)
chr6 (64-232)||(1523440-1523608)
chr6 (83-228)||(30894652-30894795)
chr6 (83-231)||(30776715-30776862)
chr6 (83-231)||(8102778-8102925)
chr6 (88-223)||(1933591-1933725)
chr6 (83-231)||(32327111-32327255)
chr6 (3-184)||(3355088-3355270)
chr6 (162-223)||(13546600-13546660)
chr6 (103-231)||(7976078-7976205)
chr6 (122-233)||(31296911-31297021)
chr6 (149-234)||(14174959-14175043)
chr6 (149-234)||(14179495-14179579)
chr6 (149-230)||(14846113-14846193)
chr6 (179-231)||(9341542-9341593)
chr6 (161-231)||(32802676-32802745)
chr6 (1-129)||(11321461-11321590)
chr6 (38-129)||(24227724-24227816)
chr6 (101-231)||(28981247-28981376)
chr6 (83-214)||(29743045-29743179)
chr6 (97-223)||(32191629-32191754)
chr6 (187-231)||(21426577-21426620)
[»] chr4 (64 HSPs)
chr4 (83-231)||(53811099-53811246)
chr4 (83-228)||(56040540-56040684)
chr4 (83-231)||(2520850-2520997)
chr4 (1-204)||(12199610-12199814)
chr4 (83-227)||(21662508-21662651)
chr4 (83-227)||(21671272-21671415)
chr4 (83-231)||(22611254-22611401)
chr4 (83-231)||(32766585-32766732)
chr4 (83-223)||(52060822-52060961)
chr4 (117-231)||(45418617-45418730)
chr4 (83-231)||(19853403-19853550)
chr4 (83-231)||(53444189-53444336)
chr4 (1-231)||(56156533-56156763)
chr4 (63-228)||(52944361-52944526)
chr4 (83-204)||(8670556-8670677)
chr4 (83-227)||(54021931-54022073)
chr4 (83-231)||(10496406-10496553)
chr4 (41-231)||(37030289-37030479)
chr4 (83-228)||(24098962-24099105)
chr4 (83-231)||(21686133-21686280)
chr4 (99-231)||(47320303-47320434)
chr4 (125-225)||(29120276-29120375)
chr4 (38-232)||(9178378-9178572)
chr4 (117-228)||(33921159-33921269)
chr4 (46-211)||(22038712-22038878)
chr4 (85-228)||(26090804-26090950)
chr4 (85-231)||(43510270-43510414)
chr4 (64-204)||(33332486-33332627)
chr4 (83-231)||(13634186-13634333)
chr4 (83-231)||(17949215-17949362)
chr4 (83-231)||(17953067-17953214)
chr4 (64-231)||(31891178-31891345)
chr4 (85-204)||(4142669-4142788)
chr4 (85-204)||(10258813-10258932)
chr4 (83-234)||(43095699-43095849)
chr4 (101-231)||(35348396-35348525)
chr4 (66-215)||(48351093-48351242)
chr4 (46-231)||(51888102-51888287)
chr4 (46-204)||(18935811-18935974)
chr4 (46-231)||(36161744-36161929)
chr4 (83-231)||(6155114-6155264)
chr4 (64-228)||(36194760-36194923)
chr4 (111-228)||(43853542-43853658)
chr4 (64-227)||(27651995-27652157)
chr4 (83-231)||(29960840-29960987)
chr4 (167-231)||(37465637-37465700)
chr4 (160-227)||(22305516-22305582)
chr4 (83-222)||(26633571-26633709)
chr4 (63-231)||(9048714-9048882)
chr4 (92-216)||(55228058-55228181)
chr4 (46-204)||(2069497-2069656)
chr4 (80-135)||(4937901-4937956)
chr4 (117-228)||(36184636-36184746)
chr4 (117-219)||(36700381-36700482)
chr4 (82-135)||(47158295-47158348)
chr4 (85-177)||(22300922-22301014)
chr4 (160-228)||(48257526-48257593)
chr4 (161-228)||(22806685-22806751)
chr4 (63-228)||(28857452-28857616)
chr4 (83-196)||(31359671-31359785)
chr4 (106-231)||(44596756-44596878)
chr4 (162-231)||(11299901-11299969)
chr4 (46-129)||(9643421-9643505)
chr4 (160-228)||(52978892-52978959)
[»] chr3 (78 HSPs)
chr3 (67-204)||(48199810-48199948)
chr3 (4-231)||(14859460-14859687)
chr3 (83-231)||(6954587-6954734)
chr3 (83-231)||(21533700-21533847)
chr3 (83-231)||(33579930-33580077)
chr3 (64-231)||(51303534-51303701)
chr3 (83-231)||(21431663-21431810)
chr3 (83-231)||(53807749-53807896)
chr3 (83-230)||(19339226-19339371)
chr3 (3-233)||(20464859-20465089)
chr3 (83-234)||(54149042-54149191)
chr3 (85-231)||(40556754-40556899)
chr3 (63-231)||(628814-628981)
chr3 (64-231)||(51923757-51923924)
chr3 (83-234)||(8914762-8914912)
chr3 (84-231)||(38545850-38545996)
chr3 (85-231)||(9998519-9998664)
chr3 (83-228)||(32701541-32701685)
chr3 (83-227)||(46304415-46304558)
chr3 (100-231)||(23799801-23799931)
chr3 (101-228)||(52923011-52923137)
chr3 (46-231)||(21313048-21313233)
chr3 (46-147)||(29239355-29239457)
chr3 (46-227)||(35175416-35175597)
chr3 (83-233)||(47041937-47042086)
chr3 (83-231)||(9797425-9797572)
chr3 (83-231)||(40487376-40487522)
chr3 (64-230)||(42460780-42460945)
chr3 (103-234)||(45568333-45568463)
chr3 (46-228)||(53099802-53099983)
chr3 (88-234)||(7448802-7448947)
chr3 (88-234)||(7456944-7457089)
chr3 (85-231)||(10229528-10229673)
chr3 (85-231)||(10233122-10233267)
chr3 (103-225)||(19619784-19619904)
chr3 (102-227)||(12050543-12050667)
chr3 (64-231)||(7546645-7546812)
chr3 (64-231)||(21289705-21289872)
chr3 (83-203)||(45424848-45424968)
chr3 (83-231)||(48650625-48650772)
chr3 (46-228)||(29922069-29922251)
chr3 (46-228)||(29971222-29971404)
chr3 (1-231)||(43488481-43488711)
chr3 (137-231)||(4711586-4711679)
chr3 (85-231)||(10108288-10108433)
chr3 (83-228)||(16235476-16235620)
chr3 (83-228)||(50194229-50194373)
chr3 (86-226)||(26275715-26275854)
chr3 (83-230)||(12149676-12149822)
chr3 (84-203)||(45425643-45425762)
chr3 (64-231)||(27706117-27706284)
chr3 (83-227)||(47896202-47896344)
chr3 (99-231)||(38860003-38860136)
chr3 (86-176)||(43016908-43016998)
chr3 (83-204)||(36461348-36461469)
chr3 (50-230)||(44805046-44805225)
chr3 (143-228)||(44959867-44959951)
chr3 (63-204)||(53508255-53508397)
chr3 (66-198)||(18011052-18011185)
chr3 (63-215)||(26716014-26716166)
chr3 (138-231)||(46220768-46220860)
chr3 (83-127)||(1649469-1649513)
chr3 (83-223)||(20608798-20608937)
chr3 (162-234)||(20987643-20987714)
chr3 (46-133)||(32246459-32246547)
chr3 (1-191)||(20987729-20987920)
chr3 (167-234)||(27856299-27856365)
chr3 (164-231)||(43017019-43017085)
chr3 (118-231)||(3085192-3085304)
chr3 (46-234)||(4821819-4822006)
chr3 (38-130)||(35864923-35865016)
chr3 (117-227)||(36734568-36734678)
chr3 (75-128)||(25053291-25053345)
chr3 (173-227)||(26739252-26739305)
chr3 (83-140)||(7887424-7887481)
chr3 (46-130)||(12947265-12947350)
chr3 (98-159)||(27066019-27066080)
chr3 (85-129)||(31310371-31310415)
[»] scaffold0127 (1 HSPs)
scaffold0127 (83-231)||(15543-15690)
[»] scaffold0017 (1 HSPs)
scaffold0017 (83-227)||(32642-32785)
[»] scaffold0050 (1 HSPs)
scaffold0050 (84-227)||(65937-66079)
[»] scaffold0445 (1 HSPs)
scaffold0445 (3-228)||(1314-1539)
[»] scaffold0121 (1 HSPs)
scaffold0121 (83-231)||(31165-31312)
[»] scaffold0049 (1 HSPs)
scaffold0049 (99-231)||(71191-71322)
[»] scaffold0088 (1 HSPs)
scaffold0088 (88-231)||(50832-50974)
[»] scaffold0884 (1 HSPs)
scaffold0884 (83-231)||(1864-2011)
[»] scaffold0347 (1 HSPs)
scaffold0347 (46-204)||(6043-6202)
[»] scaffold0009 (1 HSPs)
scaffold0009 (86-228)||(57982-58123)
[»] scaffold0042 (1 HSPs)
scaffold0042 (46-226)||(92392-92572)
[»] scaffold0888 (1 HSPs)
scaffold0888 (83-223)||(1577-1716)
[»] scaffold0136 (2 HSPs)
scaffold0136 (83-231)||(38104-38253)
scaffold0136 (46-231)||(9933-10118)
[»] scaffold0262 (1 HSPs)
scaffold0262 (83-204)||(1736-1857)
[»] scaffold0026 (1 HSPs)
scaffold0026 (83-231)||(71761-71902)
[»] scaffold0634 (1 HSPs)
scaffold0634 (83-230)||(8563-8709)
[»] scaffold0603 (1 HSPs)
scaffold0603 (83-231)||(7767-7913)
[»] scaffold0128 (1 HSPs)
scaffold0128 (105-229)||(36898-37021)
[»] scaffold0039 (1 HSPs)
scaffold0039 (67-231)||(93141-93305)
[»] scaffold0154 (1 HSPs)
scaffold0154 (99-197)||(25357-25455)
[»] scaffold0095 (1 HSPs)
scaffold0095 (67-129)||(9421-9484)
[»] scaffold0064 (1 HSPs)
scaffold0064 (83-130)||(19065-19112)
[»] scaffold0219 (1 HSPs)
scaffold0219 (117-231)||(14762-14874)


Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 18939291 - 18939518
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttc 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18939291 cgtcgtctgagtgaggcgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtcctgttgcggtgttcatttggttttattgaaagatcaacttc 18939390  T
Q  101 agtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggca 200  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  18939391 agtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgtattttggtgacttagaatttatcaaattatttgcaggca 18939490  T
Q  201 tttttgtcgttgtatgctattaacttgg 228  Q
    ||||||||||||||||||||||||||||    
T  18939491 tttttgtcgttgtatgctattaacttgg 18939518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 14872656 - 14872837
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtag 145  Q
    ||||||||| |||| | | ||||||||||||| ||| |||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| ||    
T  14872656 tttgatttcgcgtcttgtcgcggtgttcatttagttctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcag 14872755  T
Q  146 attcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    || |||||||||  |||||| ||||||||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  14872756 atccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggca-ttttgccgttgtatgctattaacttgg 14872837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 45789595 - 45789742
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||  ||||||||||||||    
T  45789595 tattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcatgtgcatttctttgacttagaattta 45789694  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | | |||||||||||| | ||||||| ||||||||||||||||||||||    
T  45789695 ttatattatttgtagg-aattttgtcattgtatgctattaacttgggtg 45789742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 5983890 - 5984040
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||||||||| ||| || |||| |||||||||  ||||||||||||||||   ||||    
T  5983890 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgtttta 5983989  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  5983990 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtgatg 5984040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 44915693 - 44915843
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| | |||| |||| |||||||||  ||||||||||  |||||| ||||    
T  44915693 tattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttcttagatttta 44915792  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| ||||| |||||||||||||  ||||||||||||    
T  44915793 tcatattatttgtaggca-ttttgccgttgtatgctatcgacttgggtgatg 44915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 27580232 - 27580019
Alignment:
Q  18 gttgtgttcttcgtcg-atcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatt 115  Q
    |||||||| ||||||| ||| ||||||||||||||||  |||| | | ||||||||||||| |||  |||||||||||| |||||||| ||||||| |||    
T  27580232 gttgtgttgttcgtcgtatc-gtgtggcatttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaatt 27580134  T
Q  116 taatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtat 215  Q
     ||| ||||||||||||||| || ||| ||||||| ||||||  |||||||||||||||||| ||||||| ||||||  || ||| ||||| | || |||    
T  27580133 caataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattattcataagca-ttttgccattttat 27580035  T
Q  216 gctattaacttgggtg 231  Q
    ||||||||||||||||    
T  27580034 gctattaacttgggtg 27580019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 21947694 - 21947506
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | | ||||||||  ||| ||| ||||||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |    
T  21947694 tttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 21947595  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||   |||||||||||||||   ||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  21947594 gatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggca-ttttgccgttgtattttattaacttgggtgatg 21947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 48750239 - 48750386
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||||||||||||||||||||||| |||||| |||| |  ||||||  |||||  ||||| ||||| || |    
T  48750239 tattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttca 48750338  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  48750339 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 48750386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 7836830 - 7836687
Alignment:
Q  87 gaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaa 186  Q
    |||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| | ||  ||| |||| || |||||||||||||||  |||||||     
T  7836830 gaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttaggttttatcat 7836731  T
Q  187 attatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||    
T  7836730 attatttgtaggca-ttttgccgttttatgctattaacttgggtg 7836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 23291680 - 23291533
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || ||||||||||||| || |||||| |||| ||||||||| || |||||||||||||||  ||||    
T  23291680 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 23291581  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||| ||| | ||||| |||| |||||||||||||||||||    
T  23291580 tcatattatttggaggta-ttttgccgttttatgctattaacttgggtg 23291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 32395052 - 32395199
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| ||||||| ||||||  ||||||||||||||||   ||||    
T  32395052 tattgaaagatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaagtttta 32395151  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||| || |||||||||||||||||||||    
T  32395152 tcatattatttataggca-ttttgccgctgtatgctattaacttgggtg 32395199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 34878316 - 34878169
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||| ||   ||| |||||||||  ||||    
T  34878316 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcagtgacttaggtttta 34878217  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| |||| |||||||||||||||||||    
T  34878216 tcatattatttgtaggca-ttttgccgttttatgctattaacttgggtg 34878169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 24582984 - 24583154
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| |||||| |||| | ||||||    ||    
T  24582984 ttgcggtgttcgttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaata 24583083  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||  ||||| ||||| | ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  24583084 ttctggtgatttagattatatcatattatttgtaggca-ttttgccgttgtatgatattaacttgggtgatg 24583154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 39888236 - 39888378
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| ||||||||||||||||  || ||||||||||||||||||| ||||||||||| ||   |||   |||||||||||||||||| ||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgacttagatttta 39888335  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||| ||| ||| || ||| |||| ||||||||||||||||||||    
T  39888336 tcatattctttatatgca-ttttatcgttgtatgctattaactt 39888378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 31984249 - 31984362
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    ||||||||||||||||||| |||||| | || |||||||||  |||||||||||||||||  ||||||| ||||||| || ||| |||||||||||||||    
T  31984249 aatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagca-ttttgtcgttgtatg 31984347  T
Q  217 ctattaacttgggtg 231  Q
    |||||||||||||||    
T  31984348 ctattaacttgggtg 31984362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 47132871 - 47133101
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatt---tgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaa 96  Q
    ||||||||||||| || |||||||| ||||||| |  ||| ||| ||   | ||||| |||| | ||||||||||| |||| ||  |||||||||||||     
T  47132871 cgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcag 47132970  T
Q  97 cttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgta 196  Q
    ||||||||||| ||||||| |||| ||||||||| |||| || ||| |||| |||||||||  |||||  ||||| ||||| || |||| ||| ||||||    
T  47132971 cttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgta 47133070  T
Q  197 ggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| ||||| |||| ||||||||||||||||    
T  47133071 ggca-ttttgccgttatatgctattaacttgg 47133101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 35484429 - 35484282
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| || ||||||  |||||||||||| || |  ||||    
T  35484429 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggtttta 35484330  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  35484329 tcatattatttgtaagca-ttttgccgttgtatgctattaacttgggtg 35484282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 45415612 - 45415759
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| | | || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  45415612 tattgaaagatctacatcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggtttta 45415711  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||  |||||| |||||||    
T  45415712 tcatattatttgtaggca-ttttgccgttgtataatattaatttgggtg 45415759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 10776497 - 10776352
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||  |||||||||||||| |||| || ||| |||| | |||||||  |||||||||||||||||  ||||||    
T  10776497 ttgaaagatcgacatcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatc 10776398  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |  ||||||||||||| |||||  ||||||| |||||||||||||||    
T  10776397 attttatttgtaggca-ttttgctgttgtattctattaacttgggtg 10776352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 31317824 - 31317940
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    ||||||||||||||||||| |||||  |||  |||||||||   ||||||||||| ||||||||||||| |||||||||||||| |||| |||||| ||     
T  31317824 aatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggca-ttttatcgttgcatc 31317922  T
Q  217 ctattaacttgggtgatg 234  Q
    ||||||||||||||||||    
T  31317923 ctattaacttgggtgatg 31317940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 36775748 - 36775604
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  |||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | ||| |||  ||||  |||||| ||||| || |    
T  36775748 tattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgatttagatttca 36775649  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||    
T  36775648 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgg 36775604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 44543306 - 44543473
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||| ||| ||||||| ||||||| |||||||||||||| |||| |||||| |||| | ||||||   |||    
T  44543306 ttgcggtgttcgttggttcatattgaaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagta 44543405  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||   |||| ||||| | ||||| |||||||||||||| ||||| |||| |||||||||||||||||||    
T  44543406 ttctagtgatttagattatatcatattatttgtaggca-ttttgccgttttatgctattaacttgggtg 44543473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 3228323 - 3228473
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||||||||||||| ||  ||||||||||||||||||| |||||| |||| || || |||   ||||||| ||| ||||  ||||    
T  3228323 tattgaaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttaggtttta 3228422  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| ||||| |||| |||| |||||||||||||||||    
T  3228423 tcatattatttgtaggca-ttttgccgttatatgttattaacttgggtgatg 3228473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 7337701 - 7337557
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||  |||| |||||| |||| |||||||||  |||||||||||| || |  ||||    
T  7337701 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggtttta 7337602  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| |||||  |||| |||||||||||||||    
T  7337601 tcatattatttgtaggca-ttttgctgttgcatgctattaacttgg 7337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 15431688 - 15431560
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    |||| |||||||| ||| ||||||||||||||||||| |||||| ||||  || ||||||  |||||| ||||| |||| ||||||| |||||||||||     
T  15431688 tcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacatagattttatcatattatttgtaga 15431589  T
Q  199 catttttgtcgttgtatgctattaacttgg 228  Q
    || |||| ||||||||||||||| ||||||    
T  15431588 ca-ttttatcgttgtatgctattcacttgg 15431560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 231
Target Start/End: Complemental strand, 29738743 - 29738555
Alignment:
Q  43 gcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgtt 141  Q
    ||||||||||||||||| |   ||| ||||  ||| |||| ||||| |||||| || ||||||||||||| ||| || |||||| ||||||||| | |||    
T  29738743 gcatttgatttcacgtcttgccgcgatgtttgtttagtttctattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaatgtt 29738644  T
Q  142 gtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | | || ||||||||| |||||||| |||||||||   |||||| ||||||| | |||| ||| | ||||||||||||||||||||||||    
T  29738643 gcaaatccggaagcatgtgtatttcagtgacttaggtgttatcatattatttattggca-tttggccgttgtatgctattaacttgggtg 29738555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 37720204 - 37720040
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  |||||||||||||||||||| |||| ||| ||| | | ||||||||||||||| |||||| |||| |  ||||||  |||||     
T  37720204 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtattc 37720105  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||| | ||||| ||||||| ||||||||||||||||||| | || | ||||||||||||||||||    
T  37720104 tggttatttagattttatcatattatttgtaggcatttttct-gtggaatgctattaacttgggtg 37720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 49626930 - 49627114
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtag 145  Q
    |||||||| || || | ||||||||||| || | |  ||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||| |||||| ||    
T  49626930 tttgatttgacatcttgttgcggtgttcgttggttcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcag 49627029  T
Q  146 attcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || | ||||||   |||||  | ||| ||||| | |||||  |||||||||| || ||||| |||||||||||||||| |||||||    
T  49627030 atgcagaagcaagagtattctgatgatttagattatatcatcttatttgtagaca-ttttgccgttgtatgctattaatttgggtg 49627114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 31919044 - 31919187
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgactta-gaatttat 183  Q
    |||||||||| || |||||||||||||  || ||||||||||||| || || |||||| |||| | |||||||    ||||| |||||||| |  |||||    
T  31919044 ttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgcagatccagaagcatgaaaatttcagtgacttagggttttat 31919143  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    || ||||||||||| || |||||||||||||||||||||||||||    
T  31919144 catattatttgtagaca-ttttgtcgttgtatgctattaacttgg 31919187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 1742335 - 1742454
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||| ||||||||| ||| || |||||||||||||||| |||||| |||| || |||||| || |||||||||||  ||  ||||    
T  1742335 tattgaaagatcggcatcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgac--aggtttta 1742432  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| ||||||||||||||||||    
T  1742433 tcatattatttgtaggcatttt 1742454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 4413210 - 4413307
Alignment:
Q  125 atttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||||||||||| |||||| |||| |||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||||  |||||||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggca-ttttgctgttgtatgctattaa 4413307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 51373818 - 51373749
Alignment:
Q  161 tatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  51373818 tatttcggtgacttatattttatcatattatttgtaggca-ttttgtcgtcgtatgctattaacttgggtg 51373749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 13144850 - 13144706
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||| | |||| | ||||||||| ||| |||||||||||||| |||| |  ||| ||||  | ||||||  ||||||| |||||||||| ||||    
T  13144850 tattgaaagaccgactttaatcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagatttta 13144751  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| | |||||||||||| ||||| | || ||||||||||||||||    
T  13144750 tcataatatttgtaggca-ttttgccattttatgctattaacttgg 13144706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 19060963 - 19061107
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||| | ||||||||||| |||| || ||||||| |||||| | || | ||||||||| | |||| |   |||||  ||||| ||||| | ||    
T  19060963 tattgaaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattata 19061062  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||    
T  19061063 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgg 19061107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 34413148 - 34412983
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||| ||| ||||||||||||| || ||| |||| ||| ||| ||||||| ||  || |||| ||||||||||| | |||||||  |||    
T  34413148 tgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcacaaattcaatcaataat--ggacgtcaacgttgtagatccagaagcatgggta 34413051  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| |||||||||||||| |||||  |||||||| ||||||||||||||    
T  34413050 ttctggtgatttagatttcatcatattatttgtaggca-ttttgcggttgtatgttattaacttgggtg 34412983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 32873902 - 32873763
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||| || | |||||||||||||||| ||||||||||||||||  ||||| | |||| |||| | ||| |||  |||||||| | |||| || ||||    
T  32873902 tattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttcgatcactttgatttta 32873803  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| ||||||||||| || | ||||| ||||||||||||||    
T  32873802 tcatattatttgtagaca-tattgtcattgtatgctattaa 32873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 51916701 - 51916575
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||  ||| ||||||||||||| ||| ||||||||||||| ||||| |||||| |||| |||||||||  ||||||| |||||||||| ||||    
T  51916701 tattgaaaga--aacgtcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatttc-gtgacttagatttta 51916605  T
Q  183 tcaaattatttgtaggcatttttgtcgttgta 214  Q
    ||| | |||||| | ||| |||||||||||||    
T  51916604 tcata-tatttgcatgca-ttttgtcgttgta 51916575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 11462443 - 11462373
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||||   ||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  11462443 gtatttcggtgacttaagttttatcatattatttgtaggaatttt-gtcgttgtatgctattaacttgggtg 11462373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 16262877 - 16263055
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | ||| ||||||| |||| ||  |||||||| ||||||| |||||||| ||| ||| ||||||||||||| || || |||||| |    
T  16262877 tttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacgttgca 16262976  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaac 224  Q
    ||| |||||||||  |||||  | ||| ||||| |||||||  ||||| ||| ||| ||||| |||| ||||||||||||    
T  16262977 gatccggaagcatgagtattctgatgatttagattttatcatgttattcgtatgca-ttttgccgttttatgctattaac 16263055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 16989462 - 16989572
Alignment:
Q  120 caatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgcta 219  Q
    |||| ||||| ||||| | |||| |||| ||||| ||| || ||||| |||||||||  ||||||| |||||||||||||| ||||| |||| |||||||    
T  16989462 caataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttaggttttatcatattatttgtaggca-ttttgccgttttatgcta 16989560  T
Q  220 ttaacttgggtg 231  Q
    ||||||||||||    
T  16989561 ttaacttgggtg 16989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 35462071 - 35461978
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatt 192  Q
    ||||||||||||| ||| || |||||||| || |||| |||||| |||| ||||||||| |||||||||||||||||   ||||||| ||||||    
T  35462071 tcagtcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaagttttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 24597350 - 24597242
Alignment:
Q  95 aacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttg 194  Q
    ||||||||||||||| | ||| |||||||||||||| |||| ||||||||||| |||||||||  |||||  | | ||||| | ||||| | ||||||||    
T  24597350 aacttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtattctgattacttatactttataatattatttg 24597251  T
Q  195 taggcattt 203  Q
    | |||||||    
T  24597250 ttggcattt 24597242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 49504633 - 49504486
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| | | || |||||||||||  ||| |||||| |||| |||||||||  || ||||||||| || |  ||||    
T  49504633 tattgaaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggtttta 49504534  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     || | ||||| |||||| ||||  ||||||||||||||||||||||||    
T  49504533 acataatatttttaggca-ttttaccgttgtatgctattaacttgggtg 49504486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 8211986 - 8211828
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||| |||||| | | ||| ||||||||| |||  |||||||||||| || |||||||| |||| ||| || ||||||| ||| |||| | |||| |    
T  8211986 tttgattccacgtcttgtcgcgatgttcatttagttactattgaaagatctacatcagtcaaatacaaattcaaccaatgatctgg-cgtcaatgttgca 8211888  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||| |||||||||  |||||||  ||||||||  ||||||| |||||||||||| |||||    
T  8211887 gatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggtatttt 8211828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 24583284 - 24583350
Alignment:
Q  167 ggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||| ||||| | ||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  24583284 ggtgatttagattatatcatattatttgtaggcatttt-gccgttgtatgctattaacttgggtgatg 24583350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 25564064 - 25564198
Alignment:
Q  95 aacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttg 194  Q
    ||||||||||||| ||||||| ||||||||||||||||||| || ||| ||||  ||||||||   ||||  ||||| ||| | ||||| | ||| ||||    
T  25564064 aacttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatattgtttg 25564163  T
Q  195 taggcatttttgtcgttgtatgctattaacttgggt 230  Q
    |||  | |||||| |||||||| |||||||||||||    
T  25564164 tagata-ttttgttgttgtatgttattaacttgggt 25564198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 34528766 - 34528829
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgattt 128  Q
    |||||||  |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  34528766 cggtgtttctttggtttatattgaaagatcaacttcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 9341815 - 9341923
Alignment:
Q  118 atcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgc 217  Q
    ||||||| ||||| |||| ||| || |||||| | ||||| | ||||  ||||||||||| ||||||| |||||||||||| | |||||| ||||||| |    
T  9341815 atcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttagattttatcatattatttgtaggta-ttttgttgttgtatac 9341913  T
Q  218 tattaacttg 227  Q
    ||||||||||    
T  9341914 tattaacttg 9341923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 26535403 - 26535503
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||| | |||||||  || |||||||||||||||| || |||||| |||| |||||||||  ||||| |||||||||||| ||||    
T  26535403 tattgaaagatcgaaatcaataaattacaatttaaatcaatgatttgggcttcaacgttgcagatccggaagcatgagtattccggtgacttagatttta 26535502  T
Q  183 t 183  Q
    |    
T  26535503 t 26535503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 6217865 - 6217818
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgg 130  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  6217865 tattgaaagatcaacttcagtcaatcacaaattcaatcaatgatttgg 6217818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 34529224 - 34529278
Alignment:
Q  179 tttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  34529224 tttatcacattatttgtaggcattttt-ttgttgtatactattaacttgggtgatg 34529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 27456556 - 27456646
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    ||||||||| |||| | | ||||||||| ||| |||  |||||||||||| || |||||||||||||  || |||||||||||||||||||    
T  27456556 tttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 12635207 - 12635270
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    |||||||||||||||  ||||||||||||||||| ||| ||| ||| ||| |||||||||||||    
T  12635207 ggtgttcatttggttcatattgaaagatcaactttagtaaatcacaaattcaatcaatgatttg 12635270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 14489410 - 14489472
Alignment:
Q  167 ggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||||| ||||| ||||||| |||||||||||| | |||||| |||||||| |||||||||||||    
T  14489410 ggtgatttagattttatcatattatttgtaggta-ttttgttgttgtatgttattaacttgggt 14489472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 41994481 - 41994540
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttg 142  Q
    |||||||||||||  |||||||||| | | |||||||||||||||||| |||| ||||||    
T  41994481 tattgaaagatcagtttcagtcaatcaaatatttaatcaatgatttggacgtcaacgttg 41994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 50377458 - 50377524
Alignment:
Q  164 ttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||||||||||| ||||||| ||| | |||||||||||||  ||| ||||| ||||||||||||||    
T  50377458 ttcggtgacttagattttatcatattgtctgtaggcattttt-ccgtcgtatgttattaacttgggtg 50377524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 16161872 - 16161950
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgtt 141  Q
    |||||||||| |||||||  ||||||||||||| ||| || |||| ||| ||| | ||||||||||||||||| |||||    
T  16161872 tgcggtgttcgtttggttcgtattgaaagatcagcttaagacaatcacaaattcattcaatgatttgggcgtcaacgtt 16161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 32679160 - 32679035
Alignment:
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
    |||||| ||||||| |||| ||||||||| || | || ||| | || |||||||||  |||||  ||||| ||||| || |||| ||| ||||||||||     
T  32679160 gtcaatcacagattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggca- 32679062  T
Q  202 ttttgtcgttgtatgctattaacttgg 228  Q
    ||||| |||| ||||| ||||||||||    
T  32679061 ttttgccgttatatgccattaacttgg 32679035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 17337623 - 17337684
Alignment:
Q  69 tgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    |||||||||||||| ||||| || ||| |||||||||||||| | |||| ||||||||||||    
T  17337623 tgttcatttggtttctattggaatatcgacttcagtcaattatatatttgatcaatgatttg 17337684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 19596402 - 19596354
Alignment:
Q  179 tttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||| |||||||||||||| ||||| |||| ||||||||||||||||    
T  19596402 tttatcatattatttgtaggca-ttttgccgttttatgctattaacttgg 19596354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Original strand, 27456656 - 27456685
Alignment:
Q  202 ttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||||||||||||||||||    
T  27456656 ttttgtcgttgtatgctattaacttgggtg 27456685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 49648933 - 49648848
Alignment:
Q  63 ttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagat 147  Q
    |||||||||| |||||||| |||| |||||||  ||||||  |||||| | ||| ||| ||||||||| ||||| |||||||||||    
T  49648933 ttgcggtgtttatttggttcttatcgaaagattgacttcaaccaattatacattcaattaatgatttgtgcgtcaacgttgtagat 49648848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 6217776 - 6217717
Alignment:
Q  168 gtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| ||||| ||||||| |||||||||||| |||||   |||||||||||||||||||||    
T  6217776 gtgatttagattttatcatattatttgtaggtattttac-cgttgtatgctattaacttgg 6217717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 21687528 - 21687579
Alignment:
Q  179 tttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||| |||||||||||||| |||| ||||| ||||||||||| |||||||    
T  21687528 tttatcatattatttgtaggca-ttttctcgttttatgctattaatttgggtg 21687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 31692525 - 31692358
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||| | ||| ||||||| ||| |||||||||||||||| |  ||| | ||||||||| || ||| ||   ||    
T  31692525 ttgcggtgttcgttggttcatattgaaagattagctttagtcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaagtatgcata 31692426  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||| ||  | ||||||| || ||||||| ||| |||||||| ||||| ||||  |||||||||    
T  31692425 ttttggtgaattttattttatcatataatttgtatgca-ttttgtcgatgtatactatcgacttgggtg 31692358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 9e-51; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 38 - 223
Target Start/End: Complemental strand, 33347602 - 33347418
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcga 137  Q
    ||||||| |||||||||| ||| | |||||||||||||||| |  ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  33347602 gtgtggcgtttgatttcatgtcttgttgcggtgttcatttgatcctattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcga 33347503  T
Q  138 cgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    |||||  ||| || ||||||  |||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||    
T  33347502 cgttgcggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtaggca-ttttgtcattgtatgctattaa 33347418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 23230696 - 23230843
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||| |||||| || ||||||||||||| ||| || |||||| ||||||||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  23230696 tattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 23230795  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23230796 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 23230843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 5046806 - 5046956
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| ||||| |||||||||||||||||| ||||||| |||||| ||||||||||| ||||||  || |||   |||||| |||||||||||||||    
T  5046806 tattgaaaaatcaaattcagtcaattacagattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgacttagaattta 5046905  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| |||| |||||||||| |||||||||||||||||    
T  5046906 tcatattatttgtaggca-ttttatcgttgtatgttattaacttgggtgatg 5046956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 29617348 - 29617168
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | ||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||| |||| |||||| |    
T  29617348 tttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgca 29617249  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||| |  || ||||  ||||  ||||| ||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  29617248 gatccataaacattgttattctggtgatttagattttatcatattatttgtaggca-ttttgttgttgtatgctattaactt 29617168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 31013644 - 31013497
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| ||| || ||||||||||| | ||| |||||||||||||| |||| |||||| |||||||||||||| |||||||| ||||||||   ||||    
T  31013644 tattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaagtttta 31013545  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  31013544 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 31013497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 471223 - 471050
Alignment:
Q  63 ttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    |||||||| || ||||||| |||||||||||||| ||||| ||||| | ||||| ||||||||||||| ||||| |||||| |||| |||||||||  ||    
T  471223 ttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggt 471124  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcat-ttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||  | ||| ||||| ||||||| ||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  471123 attctgatgatttagattttatcatattatttgtaggcattttttgtcgatgtatgttattaacttgggtgatg 471050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 43 - 231
Target Start/End: Complemental strand, 7677360 - 7677172
Alignment:
Q  43 gcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgtt 141  Q
    |||||||||||| |||| | | ||||||||| |||||||  || ||||| |||||| |||||||||||||||||  | |||||||||| ||||| |||||    
T  7677360 gcatttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaaatatcaacatcagtcaattacagattcgaccaatgatttgagcgtcaacgtt 7677261  T
Q  142 gtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||| |||||||||   ||||||||||||||||  ||||||| |||||||||| ||| ||||| ||||||||| ||||||||||||||    
T  7677260 gcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagca-ttttgccgttgtatgttattaacttgggtg 7677172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 15344324 - 15344508
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtag 145  Q
    |||||||| || || | ||||||||||| || | |  |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| |||||| ||    
T  15344324 tttgatttgacatcttgttgcggtgttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcag 15344423  T
Q  146 attcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || | ||||||   |||||  ||||| ||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15344424 atccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 15344508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 15433389 - 15433573
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtag 145  Q
    |||||||| || || | ||||||||||| || | |  |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| |||||| ||    
T  15433389 tttgatttgacatcttgttgcggtgttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcag 15433488  T
Q  146 attcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || | ||||||   |||||  ||||| ||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15433489 atccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 15433573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 15524693 - 15524877
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtag 145  Q
    |||||||| || || | ||||||||||| || | |  |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| |||||| ||    
T  15524693 tttgatttgacatcttgttgcggtgttcgttggttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcag 15524792  T
Q  146 attcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || | ||||||   |||||  ||||| ||||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15524793 atccagaagcaagagtattctggtgatttagattatatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 15524877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 18890752 - 18890588
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  ||||||||||||| |||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | ||| |||  |||||     
T  18890752 ggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtatta 18890653  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  18890652 tggtgatttagattttatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 18890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 37971336 - 37971483
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| ||||| |||  |||||||||||||||||  ||||    
T  37971336 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttaggtttta 37971435  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  37971436 tcacattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 37971483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 17693650 - 17693505
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||| ||||||| || ||||||||||||| ||| || |||||||||||||||| || ||| |||| |||||||||  |||||||| |||||||   ||||    
T  17693650 tattaaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatgtttta 17693551  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  17693550 tcatattatttgtaggcatttttgttgttgtatgttattaacttgg 17693505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 45445847 - 45445703
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| | || ||||||||| || |||| ||||||||||| ||||    
T  45445847 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagatttta 45445748  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| |||||| ||| ||||||||||||||||    
T  45445747 tcatattatttgtaggca-ttttgttgttttatgctattaacttgg 45445703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 9637445 - 9637298
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||| ||||| ||||||| |   ||| ||||||||| ||||| |||||| |||||||||| |||  |||||||||| ||||||  ||||    
T  9637445 tattgaaagatcaacatcagttaattacaaacacaattaatgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttaggtttta 9637346  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  9637345 tcatattatttttaggca-ttttgtcgttgtatgctattaacttgggtg 9637298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 20553277 - 20553134
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  20553277 tattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggtttta 20553178  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||    
T  20553177 tcatattatttgtaggca-ttttgccgttgtatgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 3673411 - 3673638
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| ||||||||||| |||||||     || ||  |||||||||  ||| | ||||||||||| ||| |||  |||||||||||| || |    
T  3673411 cgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatcgacat 3673510  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||||||| ||  |||||||| |||||||||| |||||| |||| |||||||||  ||||||| ||||||||   || |||| |||||||||||||    
T  3673511 cagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggc 3673610  T
Q  200 atttttgtcgttgtatgctattaacttgg 228  Q
    | ||||| |||||||| ||||||||||||    
T  3673611 a-ttttgccgttgtatcctattaacttgg 3673638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 10377742 - 10377889
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||| | ||| || ||||||||||| | || |||||| |||| |||||||||  ||||||||| ||||||   ||||    
T  10377742 tattgaaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagtttta 10377841  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  10377842 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 10377889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 14544985 - 14544825
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcg 136  Q
    ||||||| |||||||||||||| | | ||||||||||||| |||  |||||||||||| || ||| |||||||||  || ||||||| |||||||||||     
T  14544985 gtgtggcgtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgacatcaatcaattacaagttaaatcaattatttgggcgtca 14544886  T
Q  137 acgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtag 197  Q
    |||||| |||| |||||||||  | |||||||||||||| | ||||||| |||||||||||    
T  14544885 acgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 16928793 - 16928646
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| | || |||||| |||| || |||| |  |||||||||||||||||  ||||    
T  16928793 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggtttta 16928694  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | ||||||||||||||||||||||    
T  16928693 tcatattatttgtaggca-ttttgccattgtatgctattaacttgggtg 16928646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 20559780 - 20559637
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  20559780 tattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggtttta 20559681  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  20559680 tcatattatttgtgggca-ttttgccgttgtatgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 20571342 - 20571199
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  20571342 tattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggtttta 20571243  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  20571242 tcatattatttgtgggca-ttttgccgttgtatgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 40211338 - 40211188
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||||| |||||| |||  | |||||||||||||||| ||||||||||| |||||||||  |||||||| |||||| || ||||    
T  40211338 tattgaaagatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgacttggatttta 40211239  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||| ||| || || ||||||||||||||||  |||||||||    
T  40211238 tcatattatttgtaagca-ttatgccgttgtatgctattaatctgggtgatg 40211188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 5333464 - 5333621
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatt 164  Q
    |||||||| |||||||  ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||| ||||||||||| | |||||||  |||||    
T  5333464 cggtgttcgtttggttcctattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtatt 5333563  T
Q  165 tcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
       |||| ||||| ||| ||| |||||||||| ||| |||||| |||||||||||||||    
T  5333564 ctagtgatttagattttgtcatattatttgtatgca-ttttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 16247297 - 16247112
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | | ||||||||| ||| |||  ||| |||||||| || ||| | ||||||| ||| |||||||||||||||| || | |||| |    
T  16247297 tttgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaagatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgca 16247198  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||  |||||||| ||||||||| || |||| |||||||| ||||| ||||| |||||||||||||||||| |||||    
T  16247197 gatccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggca-ttttgccgttgtatgctattaactcgggtg 16247112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 27110499 - 27110354
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||  || |||| ||| |||| ||| ||||||||||||| ||||| |||||| ||||  |||||||| |||||||  |||||||||| ||||||    
T  27110499 ttgaaagattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgacttagattttatc 27110400  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||||||||| || |||| |||||||||||||||||||||||||    
T  27110399 atattatttgtagaca-ttttatcgttgtatgctattaacttgggtg 27110354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 28086847 - 28086706
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtga-cttagaatttat 183  Q
    |||||||||| |||||||| ||||||| ||| ||||||||||||||  ||| |||||| |||| || || |||| ||||||| ||||  ||||| |||||    
T  28086847 ttgaaagatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttat 28086748  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    || |||||||||||||| |||||||||||||||||||||||||    
T  28086747 catattatttgtaggca-ttttgtcgttgtatgctattaactt 28086706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 1239453 - 1239286
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||||||||||||||| ||| ||| |||||||||| ||| |||| |||||| |||| | ||||||   |||    
T  1239453 ttgcggtgttcgttggttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagta 1239354  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| | ||||| | |||||||||||| ||||| ||||||||||||||||||||||||    
T  1239353 ttctggtgatttagattatatcatactatttgtaggca-ttttgacgttgtatgctattaacttgggtg 1239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 7883277 - 7883130
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || | | ||||||||| ||| || |||| |||||| ||||  ||||| |||| |||||||||  |||||||||||||||||  ||||    
T  7883277 tattgaaagatctacattaatcaattacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggtttta 7883178  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  7883177 tcatattatttgtaggca-ttttgccgttgtatcctattaacttgggtg 7883130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 41896550 - 41896717
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||| ||| ||| ||| |||||||| ||| || |||||| ||||   |||||||  |||    
T  41896550 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagta 41896649  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  41896650 ttctggtgatttagatttcatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 41896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 14916261 - 14916081
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||| ||| | ||||||||||| |||||||  |||||||||| |||||||| ||||| | ||||| |||||||||||||| |||| | |||| |    
T  14916261 tttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgca 14916162  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||   ||||| | ||| ||||| ||||||| ||| |||||||||| |||||  |||||||||||||||||||    
T  14916161 gatccggaagcatgaatattt-gttgatttagattttatcatattgtttgtaggca-ttttgcagttgtatgctattaacttg 14916081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 40619128 - 40618964
Alignment:
Q  65 gcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtat 163  Q
    ||||||||||||| ||| ||||| ||||||| ||   ||||||||||| ||| ||||||| ||||||||||| |||||| |||| | |||||||  ||||    
T  40619128 gcggtgttcatttagttcttattcaaagatcgacaatagtcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtat 40619029  T
Q  164 ttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttggg 229  Q
    ||||  |||||| | ||||||| ||||| |||| ||| ||||| ||||||||||||||||||||||    
T  40619028 ttcgcagacttaaattttatcatattatgtgtatgca-ttttgccgttgtatgctattaacttggg 40618964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 1236753 - 1236586
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||||||||||||||| ||| ||| |||||||||| ||| |||| |||||| |||| | ||||||   |||    
T  1236753 ttgcggtgttcgttggttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagta 1236654  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| | ||||| | ||||| |||||| ||||| ||||||||||||||||||||||||    
T  1236653 ttctggtgatttagattatatcatactatttttaggca-ttttgccgttgtatgctattaacttgggtg 1236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 42046274 - 42046421
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||| ||||||||||||||||||| | |||| |||| | |||||||  |||||  ||||| ||||| || |    
T  42046274 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtgatttagatttca 42046373  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | | ||||||||||||||||||||    
T  42046374 tcatattatttgtaggca-ttttgacatcgtatgctattaacttgggtg 42046421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 231
Target Start/End: Original strand, 28897716 - 28897909
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcg 136  Q
    ||||||| ||||||||| |||| | | | ||||||| ||| |||  |||||||||||| || ||||||||||| |  || ||| ||||||||||||||      
T  28897716 gtgtggcgtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattataagttcaattaatgatttgggcgtaa 28897815  T
Q  137 acgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| |||| |||||| |||   |||||| ||||||||| ||||||| ||||||||||| || ||||||| || |||||||||||| ||||||    
T  28897816 acgttgcagatacggaagtattgaaatttcgatgacttagattttatcatattatttgtagtca-ttttgtcattctatgctattaacgtgggtg 28897909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 33214707 - 33214560
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || ||||||||||||| || |||||| |||| ||||||||| || |||||| |||||||   ||||    
T  33214707 tattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgcagatccggaagcatgtgaatttcgatgacttatgtttta 33214608  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| ||| || ||||| |||| |||||||||||||| ||||    
T  33214607 tcatattatttttagaca-ttttgccgttttatgctattaactttggtg 33214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 25191103 - 25190954
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgat--ttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatt 180  Q
    ||||||||||||| | |||||||||||   ||| || |||||||  ||||||||| |||||| |||| ||||||||| || ||| || ||||||||  ||    
T  25191103 tattgaaagatcagcatcagtcaattatgaattcaaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttt 25191004  T
Q  181 tatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| ||||||||||||||||||| |  || |||||||||||||||||||    
T  25191003 tatcatattatttgtaggcatttttct-attttatgctattaacttgggtg 25190954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 8443545 - 8443427
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| | || |||||| |||| |||||||| | |||||  ||||| ||||| || |||    
T  8443545 ttgaaagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatc 8443446  T
Q  185 aaattatttgtaggcattt 203  Q
    | ||||||||||| |||||    
T  8443445 atattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 43834026 - 43833885
Alignment:
Q  89 aagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaat 188  Q
    ||||| |||||||| |||| ||| ||| |||||||||||| | |||| |||||| ||||   |||||||  |||||  ||||| ||||  ||||||| ||    
T  43834026 aagattaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtgatttagtttttatcatat 43833927  T
Q  189 tatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  43833926 tatttgtaggca-ttttgccgttgtatgctattaacttgggtg 43833885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 14585730 - 14585877
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| |||| |||||| |||| ||| ||| ||||| |||||||| |||| |||||| |||| | |||||||  ||||   ||||| ||||| || |    
T  14585730 tattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtgatttagatttca 14585829  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||  ||||| ||||||||||||||||||||||||    
T  14585830 tcatattatttgtaggc-gttttgccgttgtatgctattaacttgggtg 14585877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 7198197 - 7198084
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    ||||||||||||||  ||| |||||| |||| |||||||||   ||||| ||||| ||||| ||||||| |||||||| ||| | |||||||||||||||    
T  7198197 aatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttgcagg-aattttgtcgttgtatg 7198099  T
Q  217 ctattaacttgggtg 231  Q
    ||||||| |||||||    
T  7198098 ctattaatttgggtg 7198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 30568335 - 30568210
Alignment:
Q  105 aattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||||||| ||| || |||||||||| ||||| |||||| ||||   ||||||| || |||||| ||||||||  |||||||  ||||||||||||| |||    
T  30568335 aattacaaattcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttaggttttatcatgttatttgtaggca-ttt 30568237  T
Q  205 tgtcgttgtatgctattaacttgggtg 231  Q
    || |||| |||||||||||||||||||    
T  30568236 tgccgttttatgctattaacttgggtg 30568210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 34609865 - 34610031
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaat----tacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatt 158  Q
    ||||||||||| |||| ||  ||||||||||||||||||||||||    |||| ||  ||||||||||||||||||  |||||| |||||||  | |||     
T  34609865 ttgcggtgttcgtttgtttccattgaaagatcaacttcagtcaatcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagattcgagaacatg 34609964  T
Q  159 tgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
     ||||| |||||| ||||  ||||||| ||||||  |||||| ||||| ||||| |||||||||||||    
T  34609965 agtattccggtgatttaggttttatcatattattaataggca-ttttggcgttgaatgctattaactt 34610031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 39657487 - 39657628
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||| | |||||| |||| | | ||| |||||||||||||| |||| |||||| |||| | |||||||  |||    
T  39657487 tgcggtgttcgtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 39657586  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||  ||||| ||||| || |||| ||||||||||||||||||    
T  39657587 ttctggtgatttagatttcatcatattatttgtaggcatttt 39657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 24186681 - 24186550
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    ||||||||||| |  || ||||||| ||||||||||| |||||| |||| || ||||||  ||||||| |||||||| | ||||||| ||||||| ||||    
T  24186681 tcagtcaattataagttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttatagg 24186582  T
Q  199 catttttgtcgttgtatgctattaacttgggtg 231  Q
    || ||||| ||| |||| |||||||||| ||||    
T  24186581 ca-ttttgccgtcgtatactattaacttaggtg 24186550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 29939353 - 29939495
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||||||||||||  ||| || |||||||||||||||  |||||| | || |  ||||||  ||||||| |||||||||  ||||    
T  29939353 tattgaaagatcgatctcagtcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggtttta 29939452  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||| ||||||||||| || ||||| ||||||||| |||||||||    
T  29939453 tcatattatttgtagtca-ttttgccgttgtatgatattaactt 29939495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 8826264 - 8826407
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| |||||||||| | ||| |  |||| |||||||||||||||| || |||||| | ||| |||||||| ||| ||  ||||| || |  ||||    
T  8826264 tattgaaatatcaacttcaatgaatcatcgattcaatcaatgatttgggcatcaacgttgcatatttggaagcatgtgtgttctggtgattttgttttta 8826363  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||| ||||||||| |||| |||||| ||||||||||||||    
T  8826364 tcatattacttgtaggca-ttttatcgttgcatgctattaacttg 8826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 27498400 - 27498255
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||||||||||||  | |||| ||| ||| ||||||||||||||| || ||| ||||| |||| || | ||||||| |||| ||||| ||||    
T  27498400 tattgaaagatcaacttcagt-tagtacaaattcaattaatgatttgggcgtcaacattgcagatttggaaaca-tggtatttcagtgatttagatttta 27498303  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| ||| || ||||||| || |||| ||| ||||||||||    
T  27498302 tcatattatttatagaca-ttttgtctttatatgttatgaacttgggtg 27498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 26469182 - 26469061
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||||| || ||| |||  || ||| ||||||||||||||||||| |||||||  ||  | | |||| ||||||  ||||| ||||| ||||    
T  26469182 tattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgtgcatctgaatgcatgtgtattctggtgatttagatttta 26469083  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| |||||||||||| |||||    
T  26469082 tcatattatttgtaggtatttt 26469061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 8981178 - 8981290
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | ||||||||||| |||| ||  ||||||||||||| | ||||||||| ||||||| |||  ||||||||| |||| |||||  |    
T  8981178 tttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttggacgtcaacgttaca 8981277  T
Q  145 gattcggaagcat 157  Q
    ||| |||||||||    
T  8981278 gatccggaagcat 8981290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 21237805 - 21237988
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||| ||| |||| | |||| |||||| |||||||  |||||||||| ||  |||| |||||  || ||| |||||||||||||| |||| | |||| |    
T  21237805 tttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatgttgca 21237904  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| | ||||||| |||| |  | ||| ||||| |||||||  || |||||||| |||||||||||||||| |||||||| ||||||    
T  21237905 gatccagaagcatgtgtactctgttgatttagattttatca--ttgtttgtagg-atttttgtcgttgtatcctattaacatgggtg 21237988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 35283334 - 35283249
Alignment:
Q  148 tcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||||||||  |||||||| | ||||||| ||||||| ||||||||||   |||||  ||||||||||||||||||||| ||||||    
T  35283334 tcggaagcatgagtatttcgatcacttagattttatcatattatttgtatatatttta-tcgttgtatgctattaacttgtgtgatg 35283249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 8867892 - 8867995
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    |||||||||||||||| || | |||| ||||  |||||| |   ||||  ||||| ||||| ||||||| |||||||||||||| |||||||||||||||    
T  8867892 aatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtaggca-ttttgtcgttgtatg 8867990  T
Q  217 ctatt 221  Q
     ||||    
T  8867991 ttatt 8867995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 41060212 - 41060149
Alignment:
Q  170 gacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||||||| ||||||| ||||||||||| || |||||| |||||||||||| || ||||||||||    
T  41060212 gacttagattttatcatattatttgtagcca-ttttgttgttgtatgctatcaatttgggtgatg 41060149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 41684512 - 41684556
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||    
T  41684512 gtatttcgatgacttagattttatcatattatttgtaggcatttt 41684556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 39450577 - 39450640
Alignment:
Q  67 ggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    ||||||| ||||||| || ||||||||||||||| ||||||||||| ||| |||||| ||||||    
T  39450577 ggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 39450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 27747099 - 27746989
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaat-tatttgtaggcatttttgtcgttgtat 215  Q
    |||||| ||||||||| || ||||||||||| |||| ||||  ||||| |||| ||||   |||||||| || | |||||||||| || ||||||| |||    
T  27747099 aatcaaagatttgggcatcaacgttgtagatccggatgcatgggtattccggtcactt-ttatttatcatatatttttgtaggca-ttatgtcgttatat 27747002  T
Q  216 gctattaacttgg 228  Q
    |||||||||||||    
T  27747001 gctattaacttgg 27746989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 17151484 - 17151628
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatt-tgtatttcggtgacttagaattt 181  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||    
T  17151484 tattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcattgggtatttcggtgacttggaattt 17151583  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    |||| |||||| ||||| | |||||| |||||||||||||||||||    
T  17151584 atcatattattagtaggta-ttttgttgttgtatgctattaacttg 17151628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 4264450 - 4264664
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaactt 99  Q
    ||||||| ||||||| ||||| ||| |||||||    ||| ||  ||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||    
T  4264450 cgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaactt 4264549  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    ||||||||||||||||||||||||||||| || ||| | |||  | ||  ||||||||  |||||||| ||||||  ||||||||| |||||||||||||    
T  4264550 cagtcaattacagatttaatcaatgatttaggagtcaatgttccaaatctggaagcatgggtatttcgatgacttcaaatttatcatattatttgtaggc 4264649  T
Q  200 atttttgtcgttgtat 215  Q
    | ||||||||||||||    
T  4264650 a-ttttgtcgttgtat 4264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 12554241 - 12554073
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||| ||  |||||||| |||||||||||||||||||||||| ||||||||||||||| || ||| ||| | ||| ||||||||  ||    
T  12554241 ttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgggtgtggacattgcatatttggaagcatgagt 12554142  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| || ||||||  ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  12554141 atttcagtaacttaggttttatcatattatttgtaggca-ttttgtcgttgtatgatattaacttgggtg 12554073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 1421737 - 1421884
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||| ||||  ||||    
T  1421737 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttta 1421836  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  1421837 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 1421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 33923766 - 33923913
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||| || |||||||||||||||  ||||    
T  33923766 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 33923865  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||| ||||  |||||||||| |||||||||||||||||||    
T  33923866 tcatattatttgcaggc-gttttgtcgttttatgctattaacttgggtg 33923913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 25509106 - 25508957
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| |||||||| |||||| | || ||||| |||  |||||||| ||||||||| |||||    
T  25509106 attgaaagatcaacatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttat 25509007  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |  |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  25509006 cgtattatttgtaggca-ttttgccgttgtatgttattaacttgggtgatg 25508957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19029036 - 19028810
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatca-gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaact 98  Q
    |||||||| |||  || |||||||| ||||||| ||| ||| ||||||||||||| |||| | |  |||||||||||| |||  |||||||||||| |||    
T  19029036 cgtcgtctaagttcggcgttgtgttattcgtcg-tcatgtgcggcatttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaagatcgact 19028938  T
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    |||||||| |||| ||| ||||||||||||| ||||| |||||| | || | |||||||   ||||||||| ||||||| ||||||| | ||||||||||    
T  19028937 tcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttcggtaacttagattttatcatactatttgtagg 19028838  T
Q  199 catttttgtcgttgtatgctattaacttg 227  Q
    ||||||| ||||| |||||||||||||||    
T  19028837 cattttt-tcgttttatgctattaacttg 19028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 4904205 - 4904040
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||||||  |||||||||||| || ||||||||||||| ||| ||   |||||||||| ||| |||||| |||| | |||||||   |    
T  4904205 ttgcggtgttcgtttggttcatattgaaagatcgacatcagtcaattacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggat 4904106  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  4904105 atttcggtgacttagattttatcatattatttgtagaca-ttttgtcgttgtatgctattaacttgg 4904040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 18763448 - 18763676
Alignment:
Q  3 tcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttca 101  Q
    |||||| |||| ||||||||||| |||||||    ||| ||| ||||||||| |||| | |  |||||||| ||| |||  ||||||||||||  | |||    
T  18763448 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggcatca 18763547  T
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
     ||||||||| ||| || |||| ||||||||||| |||||  |||| ||||||||| || |||||||||||||||  ||||||| ||||||||||||||     
T  18763548 atcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggca- 18763646  T
Q  202 ttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| |||| |||||||||||||||||||    
T  18763647 ttttgccgttttatgctattaacttgggtg 18763676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 24461483 - 24461651
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||  ||||||| |||| ||||||||| || | |||||| |||| |||||||||| ||    
T  24461483 ttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatccggaagcattagt 24461582  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| ||||| ||||| || |||| ||| |||||||| | |||||||||| |||||||||||||| ||||    
T  24461583 attttggtgatttagatttcatcatattttttgtaggta-ttttgtcgttatatgctattaactttggtg 24461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 37876687 - 37876495
Alignment:
Q  42 ggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgt 140  Q
    ||||||||||||| |||| | | ||||||||  ||| |||  ||||| |||||| || ||||||||||||| ||| || |||||| |||||| || ||||    
T  37876687 ggcatttgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgacttgggcatcaacgt 37876588  T
Q  141 tgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    || |||| || ||||||  |||||||||||||||| | ||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  37876587 tgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggca-ttttgccgtcgtatgctattaacttgggtgatg 37876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 1415618 - 1415765
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||| || |||||||||||||||  ||||    
T  1415618 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 1415717  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||  ||||  ||||||||||||||||||    
T  1415718 tcagattatttgtaggca-ttttaccgtttaatgctattaacttgggtg 1415765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 37 - 228
Target Start/End: Complemental strand, 28871874 - 28871683
Alignment:
Q  37 agtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    |||| ||| ||||||||| |||| | | ||||||||| |||||||  ||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  28871874 agtgcggcgtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtc 28871775  T
Q  136 gacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||| |||||| ||| ||| | |||||  |||||| | ||||||||| | || | ||| ||| ||||| |||||||| ||||||||||||    
T  28871774 gacgttgcagattcagaatcatgtatattttagtgactcaaaatttatcatactaatcgtaagca-ttttgccgttgtatactattaacttgg 28871683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 33760232 - 33760089
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| |||| |||| |  || ||| |||||||| ||||||||||| |||    
T  33760232 tattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataaacatgtgtatttcagtgacttagaactta 33760133  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||||||| |||||  |||||| ||||||||||||    
T  33760132 tcatattatttgtaggca-ttttgctgttgtaagctattaacttg 33760089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 4778816 - 4778961
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||||    
T  4778816 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatc 4778915  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||| |||||| |||||||    
T  4778916 atattatttgtaggca-ttttgccgttgtatgttattaatttgggtg 4778961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 3308986 - 3309153
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| ||| ||| ||||||||||||||||||  |||||| |||| | |||||||  |||    
T  3308986 tgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggta 3309085  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||| | || |||| ||||||||||| || ||||| ||||||||||||||||||||||||    
T  3309086 ttctggtgatttatatttcatcatattatttgtagtca-ttttgccgttgtatgctattaacttgggtg 3309153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 10237255 - 10237108
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||| |||||||||||||| |||| |||||| |||| | |||||||  |||||  | ||| ||||| || |    
T  10237255 tattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgatttagatttca 10237156  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  10237155 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 10237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 7646536 - 7646686
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgattt-----gggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaat 179  Q
    |||||||||| || ||||||||||||| ||| ||||||||||||     || |||| |||||| |||| |||||||||  ||||||||||||||||   |    
T  7646536 ttgaaagatctacatcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagtt 7646635  T
Q  180 ttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  7646636 ttatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 7646686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 10929688 - 10929870
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||  |||| | ||||||||||| |||||||  | |||||| |||| ||||||||||| ||||||| |||||||||||||| | || |||||| |    
T  10929688 tttgatttagcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgca 10929787  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||||||||| ||||||  ||||| ||| | ||||||| ||||||| |||||| |||||| |||| |||||||||||||||    
T  10929788 gatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggca-ttttgttgttgaatgctattaacttgg 10929870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 9169295 - 9169153
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||| ||||||| ||| ||  |||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||    |||||    
T  9169295 ttgaaagatctacatcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatc 9169196  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    | |||||||||||||| ||||| |||||||||||||||||||||    
T  9169195 atattatttgtaggca-ttttgccgttgtatgctattaacttgg 9169153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 12677489 - 12677344
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | | ||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||| || |||| ||||||||||  ||||    
T  12677489 tattgaaagatcggcataagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttta 12677390  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||| |||| ||||||||||||||  |||| ||||||||||||||||||    
T  12677389 tcatatta-ttgtaggcattttt-ccgttttatgctattaacttgggt 12677344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 19062389 - 19062236
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| |||||||||||||| |||| |||||  |||| || ||||||  ||||||||||||||||   ||||||    
T  19062389 ttgaaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatc 19062290  T
Q  185 aaatt-----atttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    | |||     ||||||||||| ||||| |||||||||||||||||||||||||||    
T  19062289 atattatttaatttgtaggca-ttttgccgttgtatgctattaacttgggtgatg 19062236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 27097443 - 27097299
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| ||||  ||||||| | ||||||||||||||||   ||||||    
T  27097443 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatctggaagca-tggtatttcggtgacttaagttttatc 27097345  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||| | ||||| |||||||| |||||||||||||||    
T  27097344 atattatttgtagg-aattttgccgttgtatactattaacttgggtg 27097299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 41694684 - 41694829
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    ||||||||||| |||||| |||||||| ||| |||||||||||||||| || |||||| |||| | ||||||| |  |||  ||||||||||| ||||||    
T  41694684 ttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagattttatc 41694783  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||||| |||||| |||||||||| |||| ||||||||| ||||    
T  41694784 atattatttataggca-ttttgtcgttatatgttattaactttggtg 41694829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 8809341 - 8809484
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||||||||||||  || ||||||||||||||||| | || ||| |||| |||||||||  | ||||| |||||||||| ||||    
T  8809341 tattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgacttagatttta 8809440  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||| | |||| || |||||||||||||||||||||||||||    
T  8809441 tcatatta-tagtagaca-ttttgtcgttgtatgctattaacttgg 8809484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 31128803 - 31128698
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||| |||| |||||||||  ||||||| |||||||| | ||||||| ||||||||||||    
T  31128803 tcagtcaattacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtagg 31128704  T
Q  199 catttt 204  Q
    ||||||    
T  31128703 catttt 31128698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 31788517 - 31788661
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |  ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| || ||||||  ||||||| |||||||||  ||||    
T  31788517 tattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggtttta 31788616  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     || |||||||||||||| ||||| |||||||||||||||||||||    
T  31788617 acatattatttgtaggca-ttttgccgttgtatgctattaacttgg 31788661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 32448678 - 32448511
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| |||||| |||| | ||||||   |||    
T  32448678 ttgcggtgttcgttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagta 32448579  T
Q  163 tttcggtgacttaga--att-tatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||  ||||| |||||  ||| ||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  32448578 ttctggtgatttagattattatatcatattatttgtaggca-ttttgccgttgtatgctattaacttgg 32448511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 7677912 - 7677765
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| | || |||||| |||| || ||||||  ||||||| |||| ||||  ||||    
T  7677912 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggtttta 7677813  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  7677812 tcatattatttttaggca-ttttgccgttgtatgctattaacttgggtg 7677765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 17249186 - 17249039
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||||  |||||||||| ||||||| |||||||||||||| |||| |||||| |||| |  |||||   |||||  ||||| ||||| | ||    
T  17249186 tattgaaagatcagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattata 17249087  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||| || ||||| ||||||||||||||||||||||||    
T  17249086 tcatattatttgtagaca-ttttgccgttgtatgctattaacttgggtg 17249039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 23933679 - 23933512
Alignment:
Q  63 ttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||| ||||||| |||||| |||| |||||  | ||  ||||||||   |    
T  23933679 ttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgttacatatctggaagcatggat 23933580  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    | |  ||||| ||||| ||||||| |||||||||||| | ||||| ||||||| |||||||||||||||    
T  23933579 aatctggtgatttagattttatcatattatttgtagg-aattttgccgttgtaagctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 225
Target Start/End: Complemental strand, 29279607 - 29279468
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    ||||| ||||||| |||||| |||||| ||| ||||||||||||| ||||| | |||| |||| ||||| |||  || ||||||||||||| | ||||||    
T  29279607 ttgaatgatcaacatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatc 29279508  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaact 225  Q
    | |||||||||||||| ||||| |||| |||||||||||||    
T  29279507 atattatttgtaggca-ttttgccgttttatgctattaact 29279468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 30400074 - 30399947
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagc------atttgtatttcggtgacttag 176  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |||| || ||||      |||||  |||  |||||||||    
T  30400074 tattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgacttag 30399975  T
Q  177 aatttatcaaattatttgtaggcatttt 204  Q
    | ||||||| ||||||||||||||||||    
T  30399974 attttatcatattatttgtaggcatttt 30399947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 33585774 - 33585627
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| ||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||| |||||||| |||   ||||    
T  33585774 tattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtaattcggtgatttaagtttta 33585675  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  33585674 tcatattatttgtatgca-ttttgccgttgtatgctattaacttgggtg 33585627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 38445227 - 38445374
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||| ||||||| ||| || ||||||||||| |||| |||||| |||| ||||||| |  ||||||||||||||||   ||||    
T  38445227 tattgaaagatctacatcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagtttta 38445326  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | ||||||| ||||||||| ||||    
T  38445327 tcatattatttgtaggca-ttttgccattgtatgttattaactttggtg 38445374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 231
Target Start/End: Complemental strand, 5427953 - 5427761
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcg 136  Q
    ||||||| ||||||||| |||| | | ||||||||  ||| |||  ||||| |||||| || ||||||||| ||| ||| || |||||| ||| |||||     
T  5427953 gtgtggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatctacatcagtcaat-acaaattcaaccaatgacttgtgcgtca 5427855  T
Q  137 acgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| |||| |||||| || |||||||| |||||||||  ||||||| |||||||| | |||||||  |||||||||||||||||||||||||    
T  5427854 acgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagcatttta-tcgttgtatgctattaacttgggtg 5427761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 16375962 - 16376150
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||| ||||| ||||||| ||| |||||||  |||||||||| |||   |||||| | ||||||| |||||||||||| |||||| | |||| |    
T  16375962 tttgatttcatgtcctgttgcggtattcgtttggttcctattgaaagaccaaaaccagtcagtcacagattcaatcaatgatttcggcgtcaaagttgca 16376061  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||||  |||||| ||||||  | ||| ||| | ||||||| ||||||||||| |||||| || ||||||||| |||||||||| |||||    
T  16376062 gattcaaaagcatgtgtattatgatgatttaaattttatcatattatttgtagtcattttggt-gttgtatgcgattaacttggatgatg 16376150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 43397241 - 43397010
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| |||||||    ||||||| ||||||||| |||| | | ||||||||| |||  ||  ||||||||||||  | |    
T  43397241 cgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcggcat 43397142  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgtt-gtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
     || ||| |||  ||| || |||||||||||||||| ||||| | |||| ||||||||| || ||||| |||||||||  ||||||| |||||||||| |    
T  43397141 tagccaactacgaattcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgtacg 43397042  T
Q  199 catttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| | |||| |||||||||||||||||||    
T  43397041 catttt-gccgttttatgctattaacttgggtg 43397010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 14423348 - 14423507
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||||| |  | ||||||||||  ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||| |    
T  14423348 tttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgca 14423447  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
     ||   ||| |||  |||||| ||| | ||||| ||||||| ||||| | ||||||||||    
T  14423448 aatctagaaacatgggtatttaggttagttagattttatcatattatatttaggcatttt 14423507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 31210646 - 31210525
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| ||||  | ||||||  |||||||||||| ||||  ||||    
T  31210646 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggtttta 31210547  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| ||||||||||||||||||    
T  31210546 tcatattatttgtaggcatttt 31210525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 36691916 - 36692079
Alignment:
Q  65 gcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtat 163  Q
    ||||||||| ||| |||| || ||||||||  || || |||||||||| ||| || ||||||||||| |||| || ||| |||| |  |||||| || ||    
T  36691916 gcggtgttcgtttagtttctactgaaagattgacatcggtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaat 36692015  T
Q  164 ttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||||| ||||  ||||||| |||||||||||||| ||||| |||| ||||||||||||||||    
T  36692016 ttcggtgatttaggttttatcatattatttgtaggca-ttttgccgttttatgctattaacttgg 36692079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 36943159 - 36943041
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    ||||||||||| || | |||| |||||| |||  | |||||||||||||||| |||||| |||| ||||| |||  |||||||||||||||  | |||||    
T  36943159 attgaaagatctacattagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttat 36943060  T
Q  184 caaattatttgtaggcatt 202  Q
    || ||||||||||||||||    
T  36943059 catattatttgtaggcatt 36943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 29173739 - 29173609
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatca---aattatttgtaggc 199  Q
    ||||||||| ||| ||||||| ||||||| ||| |||||| |||| || ||||||  |||||||||||||||||| |||||||    |||||||||| ||    
T  29173739 tcaattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattattatttgtatgc 29173640  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||| |||||||| ||||||||| ||||    
T  29173639 a-ttttgttgttgtatgttattaactttggtg 29173609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 36175582 - 36175477
Alignment:
Q  37 agtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    |||||||| ||||||| | |||| | ||||||||||| |||||||| ||||||||||||||| |||  |||||||| ||| |||||||||||||| ||||    
T  36175582 agtgtggcgtttgattccgcgtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtc 36175483  T
Q  136 gacgtt 141  Q
     |||||    
T  36175482 aacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 12647148 - 12646998
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| ||||||||||| ||||||| |||| || |||||| || | | ||||||||| |||||||||   ||||| ||||| |||||   |     
T  12647148 tattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtgatttaga---tt 12647052  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatgatg 237  Q
    ||| ||| |||||||||| |||||  |||  ||||||||||||||||||||||||    
T  12647051 tcatattttttgtaggca-ttttgctgttagatgctattaacttgggtgatgatg 12646998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 7448310 - 7448421
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || |||| |||||| |||| |||||| |||| |||||||||  ||||||| ||||||||   ||||||    
T  7448310 ttgaaagatctacatcagtcaattacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagttttatc 7448409  T
Q  185 aaattatttgta 196  Q
    | ||||||||||    
T  7448410 atattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 17994735 - 17994648
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    |||||||||||||| |||| |||||| | || ||||| |||  |||||||||||||||| | ||||||| ||||||||||||||||||    
T  17994735 aatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcatttt 17994648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 41327526 - 41327616
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    |||||||||||||  | ||||||||||| |||||||| |||||||||||| | |||||||||||||| ||| || ||||||||||| ||||    
T  41327526 tttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtc 41327616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 29574667 - 29574523
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||| | ||||||||||| ||||||| |||||||||||||| || | |||||| |||| |||||||||   ||||  | ||| ||||| || |    
T  29574667 tattgaaagattagcttcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttca 29574568  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||| ||||||| || ||||||| || ||||||||||| ||||    
T  29574567 tcatattttttgtagtca-ttttgtcattatatgctattaatttgg 29574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 11985255 - 11985128
Alignment:
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||||||| | | || ||||||||| || ||| |||||| |||| | |||| ||  ||||||| |||||||||  ||||||| |||||||||||||    
T  11985255 cagtcaattacaaactcaaccaatgatttaggtgtcaacgttgcagatccagaagaatgagtatttcagtgacttaggttttatcatattatttgtaggc 11985156  T
Q  200 atttttgtcgttgtatgctattaacttgg 228  Q
    | |||||  ||||||| ||||||||||||    
T  11985155 a-ttttgctgttgtatcctattaacttgg 11985128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 14955570 - 14955737
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||||||| |||| ||||||  ||| | | ||| ||||||||||||| ||||| |||||| |||| | ||| ||| ||||    
T  14955570 tgcggtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgta 14955669  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  | ||| ||||| ||||||| ||||||||||| || |||| || ||||||| ||||||||| ||||    
T  14955670 ttctgatgatttagattttatcatattatttgtagaca-ttttatcattgtatgttattaacttaggtg 14955737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 18107721 - 18107646
Alignment:
Q  151 gaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||||||| ||||||||| |||||||||||| |||| |||||||||||||| |||||||||| |||  ||||||||||    
T  18107721 gaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggca-ttttgtcgttttatattattaacttg 18107646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 37416771 - 37416918
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| |||||||  ||||||| ||||||| ||||||||||||||  ||| || ||| ||   ||||||||| ||||||   |||| ||| | ||||    
T  37416771 tattgaaatatcaactcgagtcaatcacagattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatatttta 37416870  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||| || ||||| ||||||||| | ||||||||||||    
T  37416871 tcatattatttgtagaca-ttttgccgttgtatgttgttaacttgggtg 37416918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 39310885 - 39310774
Alignment:
Q  89 aagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaat 188  Q
    |||||| |||||||||||||||| ||| ||||| |||||||||| || || ||| | || || | ||||  ||||||| |||||||||| ||||||| ||    
T  39310885 aagatcgacttcagtcaattacaaattcaatcattgatttgggcatcaacattgcacatccg-aggcatgggtatttcagtgacttagattttatcatat 39310787  T
Q  189 tatttgtaggcat 201  Q
    |||||||||||||    
T  39310786 tatttgtaggcat 39310774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 35220368 - 35220536
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatt 164  Q
    |||||||||||| |||  ||||||||||||||| |||||| |||||| ||| || |||||||||||||||| || ||| ||||    ||||||  |||||    
T  35220368 cggtgttcatttagttcctattgaaagatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgcagatcttaaagcatgggtatt 35220467  T
Q  165 tcggtgacttagaatttatcaaat---tatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||||||| |  ||     ||   |||||||||||| ||||||||||||||||||||||||||||||    
T  35220468 tctgtgacttaaatcttgaagcatgggtatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 35220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 28534031 - 28533850
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||||  || | ||||||||||| |||| ||  ||||||||||  | ||||| ||||| ||||||| ||| |||||||||| |||| || ||| |    
T  28534031 tttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagattcaataaatgatttggacgtcaactttgca 28533932  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
     ||   ||| ||||  ||||  ||||| || || ||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  28533931 aatctagaaacattgatattcgggtgatttggattttatcatattatttgtaggtatttt-gtcgttgtatgctattaacttg 28533850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 280946 - 281006
Alignment:
Q  171 acttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||| ||||||||||    |||||| ||||||||||||||||||||||||    
T  280946 acttagaatttatcatattatttgtatatttttttgccgttgtatgctattaacttgggtg 281006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 4041633 - 4041486
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||  || | |||||||| || | | || ||||||||||| |||| |||||| |||| || ||||||  |||||||| | ||||||  ||||    
T  4041633 tattgaaagatttacattagtcaattgcaaactcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggcttta 4041534  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||| || |||||  |||| ||||||||||||| ||||    
T  4041533 tcatattatttgtagcca-ttttgctgttgcatgctattaacttaggtg 4041486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 4100474 - 4100541
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||||||||||||   ||||||| |||||||||||||| ||||| ||||||||| |||||||||||    
T  4100474 gtatttcggtgacttaagttttatcatattatttgtaggca-ttttgccgttgtatgatattaacttgg 4100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 6358836 - 6358773
Alignment:
Q  167 ggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| ||||| ||||||| |||||||||| | ||||| ||||||||||||||||||||||||||    
T  6358836 ggtgatttagattttatcatattatttgtacgtatttt-gtcgttgtatgctattaacttgggtg 6358773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 37994423 - 37994492
Alignment:
Q  161 tatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| |||||| ||||| ||||||| |||||||||||||| |||||  ||| |||||||||||||||||||    
T  37994423 tattccggtgatttagattttatcatattatttgtaggca-ttttgctgttatatgctattaacttgggtg 37994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 13014885 - 13014819
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||||||| || ||||||||||||||| ||||| |||||||| |||||  || ||||||||||||||||    
T  13014885 gtatttcagtcacttagaatttatcacattatatgtaggca-ttttgctgtcgtatgctattaacttg 13014819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 14416223 - 14416369
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatg-atttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    |||||| ||| |||||||||||||||||||| |||||||| |||||| | |  || ||| | ||||| ||||||  |||||   ||||| |||| |||||    
T  14416223 ttgaaatatcgacttcagtcaattacagattcaatcaatgaatttggacattaacattgcatattcgaaagcatgggtattagagtgacatagattttat 14416322  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||| ||||||| |  |||||| ||||||| ||||||||| ||||    
T  14416323 catattaattgtaggga-gtttgtcattgtatgttattaacttaggtg 14416369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 6358928 - 6358851
Alignment:
Q  66 cggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttg 142  Q
    |||||||  ||||||| ||||||||||||||||||||| || | ||| ||| |||| || ||||||||||| ||||||    
T  6358928 cggtgtttgtttggttcttattgaaagatcaacttcagacagtcacaaattcaatctataatttgggcgtcaacgttg 6358851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 41327898 - 41327950
Alignment:
Q  181 tatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||| |||||||||||||||||| | | ||||||||||||||||| |||||||    
T  41327898 tatcatattatttgtaggcattttgg-cattgtatgctattaacttaggtgatg 41327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 5348668 - 5348486
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||  |||| | ||||||||||| |||||||  |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||| |    
T  5348668 tttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttgca 5348569  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||| ||  || |||||||| ||||||||||||||| || |||||||||||||| ||||  |||||||||||||||||||||    
T  5348568 gattcgaaaatatgtgtatttcagtgacttagaatttaccatattatttgtaggca-ttttaccgttgtatgctattaacttgg 5348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 42978580 - 42978810
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| |||||||    ||| ||| ||||||||| |||  | | ||||||||| ||| ||| ||||||||||||| || |    
T  42978580 cgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgacat 42978679  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||| ||| ||| || |||||||||||||||| |||||| |||| |||||| ||  |||||||||||||||||  ||||||| ||||| |||||||    
T  42978680 cagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggc 42978779  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||| ||||||||||||||||||||||||    
T  42978780 a-ttttgccgttgtatgctattaacttgggtg 42978810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 37837496 - 37837349
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||| || |||||||||||||||  ||||    
T  37837496 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggtttta 37837397  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||| ||||||||| ||||| |||| |||||||||||||||||||    
T  37837396 tcatattacttgtaggca-ttttgccgttttatgctattaacttgggtg 37837349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 39229058 - 39229201
Alignment:
Q  75 tttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgact 173  Q
    |||||||| ||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||| ||||  |||||||| |||||||| | ||||    
T  39229058 tttggtttctattgaaagatcaacttcagtcaattacagattcaaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggact 39229157  T
Q  174 tagaatttatcaaattatttgtaggcatttttgtcgttgtatgct 218  Q
    |||||||||||| || ||||||||||||||||  |||||||||||    
T  39229158 tagaatttatcatataatttgtaggcattttt-ccgttgtatgct 39229201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 12141346 - 12141200
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||| |||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||| ||||    
T  12141346 tattggaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagatttta 12141247  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||| |||||||||| ||| ||||| |||||||||||||||||||||||    
T  12141246 tcatattatttgtatgca-ttttgccgttgtatgctattaacttgggt 12141200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 231
Target Start/End: Complemental strand, 39171627 - 39171481
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    ||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||||||||  |||||    
T  39171627 attgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttat 39171528  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||||||||||||| ||||| ||||||||||||||||||||||||    
T  39171527 catattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 39171481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 8001584 - 8001437
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||||||||| |||  |||||||||||||||||  ||||    
T  8001584 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggtttta 8001485  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  8001484 tcatattatttataggca-ttttgccgttgtatgctattaacttgggtg 8001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 45349920 - 45349690
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| ||||||| |  ||||||| ||||||||| |||| | | ||||||||| ||| |||  |||||||||||   | |    
T  45349920 cgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcat 45349821  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||||||| ||| || ||||||||| |||||| || ||| ||||  |||||||| || |||||||||| ||||  ||||||| |||||||||||||    
T  45349820 cagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggc 45349721  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||| |||| |||||||||||||||||||    
T  45349720 a-ttttgccgttttatgctattaacttgggtg 45349690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 38798834 - 38798978
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| || ||| |||| ||||||||| || |||||||||||||||| ||||    
T  38798834 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagatttta 38798933  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||| |||  ||||||||||||||||    
T  38798934 tcatattatttgtaggca-ttttgccgtcttatgctattaacttgg 38798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 47590364 - 47590511
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || || |||||||||| ||| || |||||||||||||||| |||||| | || |||||||||  ||||||||| |||||||  ||||    
T  47590364 tattgaaagatctacatccgtcaattacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggtttta 47590463  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47590464 tcatattatttgtaggca-ttttgccgttgtaagctattaacttgggtg 47590511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 48316850 - 48316703
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| ||| || |||| |||||||||  ||||||||| || ||||  ||||    
T  48316850 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggtttta 48316751  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  48316750 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 48316703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 34899643 - 34899501
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| | ||||||||||||  ||||||||||||||||   ||||||    
T  34899643 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatc 34899544  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    | |||||||||| ||| ||||| |||||||||||||||||||||    
T  34899543 atattatttgtatgca-ttttgccgttgtatgctattaacttgg 34899501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 234
Target Start/End: Original strand, 35132983 - 35133150
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  |||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| |  ||||||  |||||     
T  35132983 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattc 35133082  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
      |||| ||||| || |||| ||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  35133083 tagtgatttagatttcatcatattatttctaggca-ttttgccgttgtatgctattaacttgggtgatg 35133150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 19404793 - 19404651
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||  || || |||||||||| ||| ||||||||||||||||||| | |||| |||| |||||||||  ||||||| |||||||||| ||||||    
T  19404793 ttgaaagattgacatctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatc 19404694  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    | ||||||||||||| |||||| ||||| | |||||||||||||    
T  19404693 atattatttgtaggc-tttttgccgttgcacgctattaacttgg 19404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 46700050 - 46700235
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | | | ||||||| ||| |||  |||||||| ||| || |||||||| |||| ||| |||||||||||||||| ||  ||||| |    
T  46700050 tttgatttcacgtcttgtcgtggtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgca 46700149  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||   ||||||||||||||||| ||||||| ||||||| |||||| ||||| |||| ||||||||||||| |||||    
T  46700150 gatccggaagcatggatatttcggtgacttagattttatcatattatttataggca-ttttgccgttatatgctattaactagggtg 46700235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 13796967 - 13796823
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||| ||| | | || ||||||||||  |||| |||||| |||| |||||||||  |||||| |||||||||   ||||    
T  13796967 tattgaaagatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaagtttta 13796868  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||    
T  13796867 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgg 13796823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 48061475 - 48061622
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || | ||||||||||| ||| || ||||| |||| ||||| |||||| |||| |  ||||||  |||||||||||| ||||  ||||    
T  48061475 tattgaaagatctacattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttaggtttta 48061574  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  48061575 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 48061622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 9977287 - 9977104
Alignment:
Q  41 tggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacg 139  Q
    |||| ||||||||| |||| | | |||||| |||||| |||  |||||||||||| |||||||||||||||| ||| || |||||||||||||||| |||    
T  9977287 tggcgtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacg 9977188  T
Q  140 ttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||    || |||||  || ||||||| | ||| ||||| ||||||| ||||||| ||| || |||||||||||||||||||||||||||    
T  9977187 tt----atccggaattatgtgtattttgatgagttagattttatcatattatttttagaca-ttttgtcgttgtatgctattaacttgg 9977104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 19296925 - 19297070
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||| |||||   ||||||    
T  19296925 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatc 19297024  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| |||||  ||| ||||||||||| |||||||    
T  19297025 atattatttgtaggca-ttttgctgttatatgctattaatttgggtg 19297070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 39328828 - 39328684
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| |||| || |||||| || || ||||||||||||  ||||    
T  39328828 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttaggtttta 39328729  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||   |||||||||||| ||||| |||| |||||||||||||||||||    
T  39328728 tca---tatttgtaggca-ttttgccgttttatgctattaacttgggtg 39328684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 226
Target Start/End: Original strand, 25255242 - 25255422
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||| |||   ||||||||||||||| |||  ||| ||||  ||||||||| ||||||| ||||| ||||||| |||||||| |||| |||| |    
T  25255242 tttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaattatagattcaatcaattatttgggcatcgatgttgca 25255341  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||| | |||||||  | ||||  |||||||||| ||||| | || ||||||||||| |||||||||||||||||||||||||    
T  25255342 gatcctgaagcatgggcattttagtgacttagagtttataatatcatttgtaggca-ttttgtcgttgtatgctattaactt 25255422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 9450175 - 9450036
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||  |||| ||||  ||||    
T  9450175 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggtttta 9450076  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| |||||||||||||| ||||| ||||||||||||||||    
T  9450075 tcatattatttgtaggca-ttttgccgttgtatgctattaa 9450036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 22742997 - 22743144
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||| ||||||||||||| ||||| |||||| |||| | |||||||  |||||  ||||| ||||| || |    
T  22742997 tattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtgatttagatttca 22743096  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||| |||| ||||| |||||||||||||||| |||||||    
T  22743097 tcatattatttgttggca-ttttgccgttgtatgctattaatttgggtg 22743144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 30756857 - 30756710
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||| |||||| | || |||||| |||| |||||||||  ||||||||||||||||   ||||    
T  30756857 tattgaaagatctacatcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagtttta 30756758  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| |||||||||| |||||| ||||||| ||||    
T  30756757 tcatattatttataggca-ttttgtcgttttatgctgttaacttaggtg 30756710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 40993210 - 40993357
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| ||  || |||||||   || |||||| | |||| |||||||  ||||||||||||||||   ||||    
T  40993210 tattgaaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgggtatttcggtgacttaagtttta 40993309  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  40993310 tcatattatttgtaggca-ttttgtcgttgtatgttattaacttgggtg 40993357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 28476260 - 28476400
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||| ||| ||| | ||||||||||||||||| |||||| |||| | |||| ||  |||    
T  28476260 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggta 28476359  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
     |||||||| ||||| ||||||| ||||||||||||||||||    
T  28476360 -ttcggtgatttagattttatcatattatttgtaggcatttt 28476400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 35665169 - 35665027
Alignment:
Q  87 gaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaa 186  Q
    |||||||||||||||||| || | ||||| |||||||||||||  |||| | |||| |||  |  |||||| |||||||  |||| ||||| |||||||     
T  35665169 gaaagatcaacttcagtcgatcagagattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagattttatcat 35665070  T
Q  187 attatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  35665069 attattttttggcatttt-gtcgttgtatgctattaacttgggt 35665027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 25287264 - 25287083
Alignment:
Q  44 catttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttg 142  Q
    ||||||||||||| || | | |||||||||||||  || ||||||||||||  || ||| ||||||||| ||| ||||||||||||| ||||| |  ||     
T  25287264 catttgatttcacatcttgtcgcggtgttcatttacttcttattgaaagattgacatcaatcaattacaaattcaatcaatgatttgagcgtcaatatta 25287165  T
Q  143 tagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaact 225  Q
     ||||  | ||||||   ||||||||||||||||| ||||||| ||||||||||| || |||||  |||||||||||||||||    
T  25287164 cagatctgaaagcatggatatttcggtgacttagattttatcatattatttgtagcca-ttttgctgttgtatgctattaact 25287083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 26623849 - 26623684
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcag-tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttg 160  Q
    ||||||||||  |||||||  |||||||||||||||||||| |||||| || ||| ||| |||||| ||||||| ||  ||| | || |||||||||  |    
T  26623849 ttgcggtgtttgtttggttcctattgaaagatcaacttcaggtcaattgcatattcaattaatgatatgggcgtggatattgcaaatccggaagcatgag 26623750  T
Q  161 tatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    |||||||||| |||| ||||||||| |||| || |||||| |||||||||| ||| |||||||||||    
T  26623749 tatttcggtggcttataatttatcatattagttttaggca-ttttgtcgttctatactattaacttg 26623684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 24770298 - 24770442
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    |||||||||||||  | ||||||||| ||| ||| || |||||||||||||||| |||||| |||| | ||||||| || ||||||| |||||||  |||    
T  24770298 ttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggtttt 24770397  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    |||| |||||| |||| || ||||| |||| |||| ||||||||||    
T  24770398 atcatattattggtagaca-ttttgccgttttatgttattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 24069453 - 24069290
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||| ||  |||||||| |||| ||||  ||||| |||| || |||||||||||||  |||| |||||| |||  |||||||||  |     
T  24069453 ttgcggtgttcgtttgattcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgagg 24069354  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    |||  ||||| ||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  24069353 attctggtgatttagattttatcatattatttgtaggca-ttttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 228
Target Start/End: Complemental strand, 41553511 - 41553328
Alignment:
Q  45 atttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgt 143  Q
    |||||||||| |||| | ||  ||||||| |||||||  |||||||||||||| |||||||||| ||| ||| | | |||||||||| |||| ||||||     
T  41553511 atttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgc 41553412  T
Q  144 agattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| ||||| |||   ||||| ||||| ||||| ||||||| || |||| || | | ||||| |||||||||||||||||||||    
T  41553411 agatccggaaacatagatattttggtgatttagattttatcatatcatttatacgta-ttttgccgttgtatgctattaacttgg 41553328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 5792849 - 5792967
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||||||||||||  || |||||||||||||| |||| |||||| ||||  ||||||||  | |||||| ||||||| | ||||    
T  5792849 tattgaaagatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgacttatatttta 5792948  T
Q  183 tcaaattatttgtaggcat 201  Q
    ||| ||||||| |||||||    
T  5792949 tcatattatttataggcat 5792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 214
Target Start/End: Complemental strand, 38880637 - 38880485
Alignment:
Q  63 ttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||| | | |||||| ||||  ||||||||  ||    
T  38880637 ttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgt 38880538  T
Q  162 atttcggtgacttagaatttatca-aattatttgtaggcatttttgtcgttgta 214  Q
    ||||  || | ||||| ||||||| | |||| ||||| || |||||||||||||    
T  38880537 attttagttatttagattttatcatacttatctgtagaca-ttttgtcgttgta 38880485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 48930795 - 48930906
Alignment:
Q  118 atcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgc 217  Q
    |||||||||||||| ||| |||||| |||| | ||| |||| |||||  ||||| ||||| || |||| ||||||||| |||| ||||| ||||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggca-ttttgccgttgtatgc 48930893  T
Q  218 tattaacttgggt 230  Q
    |||||||||||||    
T  48930894 tattaacttgggt 48930906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 28044795 - 28044650
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    ||||||||||||| |  ||| ||||||| | ||| || || |||||||  |||| |||||| |||| ||||| |||  |||||||||||| ||||  |||    
T  28044795 ttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaacatgggtatttcggtgatttaggtttt 28044696  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| ||||||| ||| || ||||| |||||||||||||||||||||    
T  28044695 atcatattatttttagaca-ttttgccgttgtatgctattaacttgg 28044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 29617738 - 29617593
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcg-acgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    ||||||||||||||||| || |||||||||||| ||||| | ||||  |||||| |||||| | ||  |||| |||  |||||||| | ||||||| |||    
T  29617738 tattgaaagatcaactttagacaattacagattaaatcagtaatttatgcgtcgaacgttgaaaatatggaaacatgggtatttcgatcacttagatttt 29617639  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| ||||||||||| || |||||| ||||  ||||||||||||||    
T  29617638 atcatattatttgtagaca-ttttgttgttgagtgctattaacttgg 29617593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 11343842 - 11344009
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||  |||||||  ||||||||||| || |||||||||||||| ||||||| |||||||||| |||| |||||| ||| || |||  ||  ||    
T  11343842 ttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcaga-tccgaaaaatgagt 11343940  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| ||||| ||| | ||||  | |||||||||||| | |||||  |||||||||||||||||| ||||    
T  11343941 attttggtgatttatattttacaatattatttgtaggta-ttttgatgttgtatgctattaacttaggtg 11344009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 22087370 - 22087430
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgt 143  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||| |||||||    
T  22087370 tattgaaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttgt 22087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 3224487 - 3224342
Alignment:
Q  45 atttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgt 143  Q
    ||||||||||||||  | ||||| ||||| |||||||  ||||||| ||||||||||||||||| || |||| ||| |||||||| | |||| | |||||    
T  3224487 atttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggattcaattaatgattttgacgtc-aagttgt 3224389  T
Q  144 agattcggaagcatttgtatttcggtgacttagaatttatcaaatta 190  Q
    |||| |||||| ||  |||||  ||||| ||||| ||||||| ||||    
T  3224388 agatccggaagaatgagtattatggtgatttagattttatcatatta 3224342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 4530047 - 4530236
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||  ||||||||||| |||||| ||  ||||||| ||||||||  |||| | |||||||||||| || |||  | |||||||||||||||    
T  4530047 cgtcgtctaagtacggtgttgtgttattcgtc-atttgtgtggcgtttgattttgcgtcttgttgcggtgttcaattagttactgttgaaagatcaactt 4530145  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaatta 190  Q
    |||||| ||||| ||| |||| | ||||| |||||  |||||| | || | |||||||  ||||||  || ||||||| ||||||| ||||    
T  4530146 cagtcagttacaaattcaatccaagatttaggcgtaaacgttggatatccagaagcatgggtatttttgtaacttagattttatcatatta 4530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 5000067 - 4999920
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||| ||| ||||| |||||||||||||| ||| ||||||| |||||| | || ||||||  |||  ||||||||   ||||  ||||| ||| | ||||    
T  5000067 tattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatttaaatttta 4999968  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| ||| ||||||| |||||||||| |||| |||||||||    
T  4999967 tcatattatttatagacattttt-tcgttgtatgttattgacttgggtg 4999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 3394529 - 3394603
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcat 157  Q
    ||||||| ||||||||||||||||| ||| ||| ||||||||||||   |||||| ||||||||| || ||||||    
T  3394529 tattgaatgatcaacttcagtcaatcacatattcaatcaatgatttctacgtcgatgttgtagatccgaaagcat 3394603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 24350875 - 24350803
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcat 157  Q
    ||||||||||||| |||||  |||| ||| ||| ||||||||||||||||||| |||||| |||| | |||||||    
T  24350875 tattgaaagatcagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcat 24350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 41553856 - 41553753
Alignment:
Q  45 atttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgt 143  Q
    |||||||||| |||| | ||  ||||||| |||||||  |||||||||||||| |||||||||| ||| ||| | | |||||||||| |||| ||||||     
T  41553856 atttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttgc 41553757  T
Q  144 agat 147  Q
    ||||    
T  41553756 agat 41553753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 46244255 - 46244149
Alignment:
Q  118 atcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgc 217  Q
    |||||||||||| ||||| |||||| || |||| |  ||||  ||||| ||| ||||  | ||||||| |||||||||||||| ||||||| |||||||     
T  46244255 atcaatgatttgagcgtcaacgttgcaggttcgaagacattgatattttggtcactttaattttatcatattatttgtaggca-ttttgtcattgtatgt 46244157  T
Q  218 tattaact 225  Q
    ||||||||    
T  46244156 tattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 49148068 - 49148011
Alignment:
Q  168 gtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||||||| || ||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  49148068 gtgacttggattttatcatattaattgttggcatttt-gtcgttgtatgctattaactt 49148011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 28407860 - 28407812
Alignment:
Q  179 tttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||| ||||||||||| |||||| | |||||||||||||||||||||    
T  28407860 tttatcatattatttgtagacatttt-gccgttgtatgctattaacttgg 28407812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 26610783 - 26610707
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattattt 193  Q
    ||||||||||||||||| |||  ||| |||| ||||| |||   ||||| ||||||||| ||||||||| |||||||    
T  26610783 aatcaatgatttgggcgccgatattgcagatccggaaacatggttatttgggtgacttataatttatcatattattt 26610707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 6216948 - 6217092
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| | ||||    
T  6216948 tattgaaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaatttta 6217047  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||||||||||  ||| ||||||||||||||||||    
T  6217048 tcatattatttgtaggcatttaagtcattgtatgctattaacttg 6217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 41630552 - 41630699
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||| ||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||| | || | ||||||| |||||||| |||||||||| ||||    
T  41630552 tattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttccgtgacttagatttta 41630651  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||| || ||||||||||||||||||||||||| ||||    
T  41630652 tcatattatttgtagaca-ttttgtcgttgtatgctattaacttaggtg 41630699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 13421983 - 13422127
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| ||||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||||| | ||||    
T  13421983 tattgaaagatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttatatttta 13422082  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||||| |||||||||||||  |||| ||||||||||||||||    
T  13422083 tcatattatatgtaggcattttt-ccgttttatgctattaacttgg 13422127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 34945443 - 34945590
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||    
T  34945443 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttta 34945542  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  34945543 tcatattatttataggca-ttttgtcgttgtatgctattaacttgggtg 34945590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 38597847 - 38597994
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||| |||||||||  ||||    
T  38597847 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggtttta 38597946  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  38597947 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 38597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 13007281 - 13007426
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||||    
T  13007281 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatc 13007380  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  13007381 atattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 13007426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 10722811 - 10722954
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |||||||||| ||| | ||| ||||||||||||||||||| ||||||||||| |  ||||||  |||||||||||||||||| ||||    
T  10722811 tattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgacttagatttta 10722910  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||||||||||||  || |||||| ||||||||||    
T  10722911 tcatattatttgtaggcattttt-ccgctgtatgttattaacttg 10722954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 25980208 - 25980357
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||| |||||||| |||| ||| || |||||||||||||||| | |||| ||||||||||||||  ||||||| ||||||||   ||||    
T  25980208 tattgaaagatcaacatcagtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatttc-gtgacttaagtttta 25980306  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  25980307 tcatattatttgtaggca-ttttgccgttatatgctattaacttgggtgatg 25980357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 9113761 - 9113616
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||   |||||||||||||||   ||||||    
T  9113761 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatc 9113662  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||||||||  ||||||||||||||||||||||||    
T  9113661 atattatttgtaggcattttt-ccgttgtatgctattaacttgggtg 9113616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 80 - 228
Target Start/End: Complemental strand, 31391794 - 31391647
Alignment:
Q  80 ttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaat 179  Q
    |||||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| |||| | |||| ||  |||||||||||||||||  |    
T  31391794 ttttattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggtt 31391695  T
Q  180 ttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||||||||    
T  31391694 ttatcatattatatgtaggcatttttct-gttgtatgctattaacttgg 31391647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 28540961 - 28540797
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  ||||||||||| | |||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | |||||||  ||||||    
T  28540961 ggtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattt 28540862  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| ||||| || |||| ||||||||||| |||||||  ||||||||||||||||||||||||    
T  28540861 tggtgatttagatttcatcatattatttgtagacattttt-ccgttgtatgctattaacttgggtg 28540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 38007408 - 38007554
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| |||||| ||||||||||| |||| |||||| |||| ||||||||| || |||||||||| ||||  ||||    
T  38007408 tattgaaagatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattaggtttta 38007507  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||||||||||   | || |||||||||||||||||||    
T  38007508 tcatattatttgtaggcatttt--gccttttatgctattaacttgggtg 38007554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 14211257 - 14211424
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||| ||| ||  |||||||||||||| |||| |||||| |||| | |||||||  |||    
T  14211257 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 14211356  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  14211357 ttctggtgatttagatttcatcatattatttgtaggcatttttct-gttgtatgctattaacttgggtg 14211424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 228
Target Start/End: Complemental strand, 26878193 - 26878003
Alignment:
Q  37 agtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    |||||||| |||||||||  ||| | | ||||||||| |||  ||| | |||||||||| || ||||||||||| | ||| |||||||||||||||||||    
T  26878193 agtgtggcgtttgatttcgtgtcttgtcgcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtc 26878094  T
Q  136 gacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     || ||| |||| | |||||||  |||||| ||||||||||| ||||||| ||||||||||||||  ||||||||||||| ||||||||||||    
T  26878093 aacattgcagatccagaagcatgggtattttggtgacttagattttatcatattatttgtaggca-ctttgtcgttgtat-ctattaacttgg 26878003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 2979364 - 2979200
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | ||||||   |||    
T  2979364 tgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggta 2979265  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||  ||||| ||||| || |||| |||||||||||||| || || |||||||||||||||||||||    
T  2979264 ttctggtgatttagatttcatcatattatttgtaggca-ttgtgccgttgtatgctattaacttgg 2979200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 15571536 - 15571684
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |||| ||| || |||| ||| ||||||||||||||| ||| |||||| |||| |||||||||  ||| ||| |||||||| | ||||    
T  15571536 tattgaaagatcgactttagtaaactacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgacttaaatttta 15571635  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| ||| |||||||   |||||||||||||||||||||||    
T  15571636 tcatattatttatagacatttttccagttgtatgctattaacttgggtg 15571684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 24229822 - 24229675
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| | |||| |||| ||| |||||   |||||| |||||||||  ||||    
T  24229822 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttaggtttta 24229723  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  24229722 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 24229675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 35850849 - 35850996
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||| ||||| |||||| |||| | ||||||| || |||||||||||||||  ||||    
T  35850849 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttaggtttta 35850948  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||| |||||  |||| |||| |||||||||||||||||||    
T  35850949 tcatattatttgcaggca-ctttgccgttttatgctattaacttgggtg 35850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 14726500 - 14726355
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    |||||||||||||  | ||||||||| ||| ||| || |||||||||||| ||| |||||| |||| ||||||||| || |||| ||||||||||  |||    
T  14726500 ttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttt 14726401  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||| |||||||||||||| |||||||||| |||  |||||||||||    
T  14726400 atcatattatttgtaggca-ttttgtcgttttataatattaacttgg 14726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 35921072 - 35920895
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | |||||||||||||||| ||  |||| ||||||||| |||| ||||| ||||||| |||||||||||||  |||| |||||| |    
T  35921072 tttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgca 35920973  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| |||||||||   ||||   |||| || || ||||||| |||||||||||||| ||||||| ||||||||||||||    
T  35920972 gatccggaagcatcgatattctagtgattttgattttatcatattatttgtaggca-ttttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 37986189 - 37986008
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| | || | |||||| |||| |||| || ||||||||||||||||||  |||| ||||||||| ||||||||||||| | ||||| |||  |    
T  37986189 tttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgtcatttacagattcaatcaatgatttgagtgtcgaagttaca 37986090  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    | | | |||  ||  ||||||  |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  37986089 ggtccagaattataggtattttagtgacttagaatttatcacattatttgtagaca-ttttgtcgttgtatgctattaacttg 37986008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 8088250 - 8088103
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||| |||| |||||| |||| |  || ||   |||||  ||||| ||||| | ||    
T  8088250 tattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattata 8088151  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | ||||||||||||||||||||||    
T  8088150 tcatattatttgtaggca-ttttgcctttgtatgctattaacttgggtg 8088103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 6012176 - 6012026
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||| ||||||| || ||||||||||||| ||| || ||||||||||| |||| | ||||||||| |||||||||  ||||||| ||||||||   || |    
T  6012176 tattaaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaagtttga 6012077  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| || |  |||| ||||||||||||||||||||||    
T  6012076 tcatattatttgtaggca-ttctaccgttttatgctattaacttgggtgatg 6012026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 26825482 - 26825627
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||  ||   |||||| |||| |  |||||| | |||||||||||||||   ||||||    
T  26825482 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttgtacgattacgttgcagatccataagcatgtttatttcggtgacttaagttttatc 26825581  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  26825582 atattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 26825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 41749338 - 41749523
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||||| || | |||| |||||| |||| ||  |||||| ||| |||||||| |||||| |||||| |||||||||||| | ||||| | || ||    
T  41749338 tttgatttcacatcttgttgcagtgttcgtttgattcctattgagagaccaacttcaatcaattccagattcaatcaatgatttagacgtcggcattcta 41749437  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||| |||||| | || ||| | ||||||||| ||||  ||||| || ||||||| |||||||| |||||||||||||    
T  41749438 gattcggaagcatatgtattccagtcactcataatttatcatattaaatgtagaca-ttttgtcattgtatgcaattaacttgggtg 41749523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 14082414 - 14082292
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    ||||||||| ||  || ||| ||||||||| || |||||| |||| |||||||||  |||||||  ||||||||  ||||||| |||||||||||||| |    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggca-t 14082316  T
Q  203 tttgtcgttgtatgctattaactt 226  Q
    ||||||||||||||||||||||||    
T  14082315 tttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 224
Target Start/End: Original strand, 7930231 - 7930367
Alignment:
Q  87 gaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaa 186  Q
    |||||||| || ||||||||||||| ||| || |||||||||| ||||| | |||| |||| |||||||||  |||||| |||  |||||  |||||||     
T  7930231 gaaagatcgacgtcagtcaattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcat 7930330  T
Q  187 attatttgtaggcatttttgtcgttgtatgctattaac 224  Q
    |||||||||||||| |||||||||||||| | ||||||    
T  7930331 attatttgtaggca-ttttgtcgttgtataccattaac 7930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 11976957 - 11976852
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    ||||||||||||| ||| || ||||||||||| |||  |||||| ||||  |||||||| || |||||||||||||||  ||||||| ||||||||||||    
T  11976957 tcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtagg 11976858  T
Q  199 catttt 204  Q
    ||||||    
T  11976857 catttt 11976852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 7036274 - 7036413
Alignment:
Q  88 aaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaa 187  Q
    ||||||| || | ||||||||||| ||| |||| |||||||||||||| |||||| |||| || ||||||  ||||||||  |||||||| ||||||| |    
T  7036274 aaagatcgacataagtcaattacaaattgaatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcata 7036373  T
Q  188 ttatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    || |||||||| | |||||  ||||||||||||||| ||||    
T  7036374 ttgtttgtagg-aattttgctgttgtatgctattaaattgg 7036413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 19103501 - 19103358
Alignment:
Q  87 gaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaa 186  Q
    ||||||| | |||||| |||| ||| ||| ||||||||||||||||||| |  ||| |||| | |||||||  ||||| |||||| ||||| || ||||     
T  19103501 gaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgatttagatttcatcat 19103402  T
Q  187 attatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||||    
T  19103401 attatttataggcattttt-ccgttgtatgctattaactttggtg 19103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 39567321 - 39567467
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    |||||||||||| |||||| |||| ||| ||| |||||||||||||| |||| || ||| |||| | ||| |||  |||||  ||||| ||||| || ||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || ||||||||||| || ||||||||||||||| ||||| ||||||||    
T  39567421 catattatttgtagaca-ttttgtcgttgtatgttattaccttgggtg 39567467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 11192467 - 11192571
Alignment:
Q  121 aatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctat 220  Q
    ||||||||||| ||| ||||||||||| ||||| |||  |||||||| | ||||  ||||||||  |||||||||| ||| ||||||||||||||| |||    
T  11192467 aatgatttgggtgtcaacgttgtagatccggaaacatgagtatttcgatcactttaaatttatcgtattatttgtaagca-ttttgtcgttgtatgttat 11192565  T
Q  221 taactt 226  Q
    ||||||    
T  11192566 taactt 11192571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 8096577 - 8096389
Alignment:
Q  42 ggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgt 140  Q
    ||||||||||||| |||| | | ||||||||| ||| |||  |||||||||||   | ||| |||||||||  || || |||||||||| ||||| || |    
T  8096577 ggcatttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcaatcaattacaatttcaaccaatgatttgagcgtcaacat 8096478  T
Q  141 tgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||  ||||  ||| || ||||| |||| ||||  ||||||| |||||||||||||| ||||| | || |||||||||||||||||||    
T  8096477 tgcagaaccggagccatgtg-atttcagtgatttaggttttatcatattatttgtaggca-ttttgccattttatgctattaacttgggtg 8096389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 11867776 - 11867845
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||||||| || ||||||| ||||| | |||||||||||||| |||||| ||||||||||||||| ||||||    
T  11867776 gtatttctgttacttagattttattatattatttgtaggca-ttttgttgttgtatgctattaatttgggt 11867845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 32691019 - 32691085
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagatt 148  Q
    |||||||||||||||| | ||||||| |||  || |||||||||||||| |||| |||||| |||||    
T  32691019 ttattgaaagatcaaccttagtcaatcacatgttcaatcaatgatttggacgtcaacgttgaagatt 32691085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 8514708 - 8514548
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatt 164  Q
    |||||||||||| |||| |||||| ||||| |||| ||||| ||||| |   |||||||||||||| |||| |  | |||||| |||| |||  | ||||    
T  8514708 cggtgttcatttagtttatattgagagatcgactttagtcatttacatacacaatcaatgatttggacgtcaatctagtagatacggaggcacatatatt 8514609  T
Q  165 tcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    | ||| ||||  | ||||||| ||||||||||   ||||| ||||||||||| |||||||||    
T  8514608 ttggtcacttttattttatcatattatttgtaaatatttt-gtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 10332495 - 10332435
Alignment:
Q  173 ttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||| || |||| ||| |||||||||||||| ||| || ||||||||||||||||||||||    
T  10332495 ttagatttcatcatattttttgtaggcatttt-gtctttatatgctattaacttgggtgatg 10332435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 20225890 - 20226049
Alignment:
Q  71 ttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggt 169  Q
    ||||||| |||| ||||| ||||||||||||| ||| ||||| ||| |||||||||||| |||| |||||||| |||||| |||||||  |||||||| |    
T  20225890 ttcatttcgtttctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgat 20225989  T
Q  170 gacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    || ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  20225990 gagttagaatttatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggt 20226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 22119874 - 22120033
Alignment:
Q  71 ttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggt 169  Q
    ||||||| |||| ||||| ||||||||||||| ||| ||||| ||| |||||||||||| |||| |||||||| |||||| |||||||  |||||||| |    
T  22119874 ttcatttcgtttctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgat 22119973  T
Q  170 gacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    || ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  22119974 gagttagaatttatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggt 22120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 23128669 - 23128817
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||  ||| ||||||||||| |||||||||  ||||||||||||||||   |||    
T  23128669 ttattgaaagatcaacatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagtttt 23128768  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| |||||||||||||| ||||| |||||||||||||||| |||||||    
T  23128769 atcatattatttgtaggca-ttttgccgttgtatgctattaatttgggtg 23128817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 127702 - 127863
Alignment:
Q  65 gcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtat 163  Q
    ||||||||||||| |||  |||||||||||| || ||||||||||||| |||  |||||||||||||||||| |||||| ||||||||||||||  ||||    
T  127702 gcggtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtat 127801  T
Q  164 ttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||| |||||  ||||||||||||||    
T  127802 ttcggtgatttagattttatcatattatttgtaggca-ttttgccgttg--tgctattaacttgg 127863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 29255484 - 29255337
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| ||||||||||||||||||| |||||  |||| ||||| |||  |||||||||||||||||| ||||    
T  29255484 tattgaaagatcttcatcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagatttta 29255385  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||||||   | |||||||||||||||||||||||    
T  29255384 tcatattatttgtaggcatttcact-gttgtatgctattaacttgggtg 29255337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 14801879 - 14802023
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||| | |||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | |||| || ||||||| ||||| ||||| || |    
T  14801879 tattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttca 14801978  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||    
T  14801979 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgg 14802023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 33053204 - 33053062
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||  |||| |||||| |||| |||||||||  ||||||| ||||||||   ||||||    
T  33053204 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatc 33053105  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    | |||||||||||||| ||||| |||||||||||||||||||||    
T  33053104 atattatttgtaggca-ttttgccgttgtatgctattaacttgg 33053062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 528389 - 528249
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    |||| ||||||||| ||||||| ||||||| ||||||||||| ||||||||||| |||||| |||||| |||| ||  |||||   |||| ||||| |||    
T  528389 ttatcgaaagatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttagatttt 528290  T
Q  182 atcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    |||| |||||||||||| | ||||||||||||||||||||||    
T  528289 atcatattatttgtaggta-ttttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 546062 - 546230
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagattt-aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||| ||| | || ||||||||||||||||||| |||||| |||| | |||||||  ||    
T  546062 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggt 546161  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||  ||||  ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  546162 attctggtggtttagatttcatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 546230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 30493567 - 30493731
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  |||||||||||||||||||||||||  || ||| |||||||||||||| |||| |||||| | || |||||||||  ||||||    
T  30493567 ggtgttcgtttggttcatattgaaagatcaacttcagtcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattt 30493666  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| ||| | |||||||  || |||||||||| ||||| ||||||||||||||||| ||||||    
T  30493667 tggtgatttatattttatcatgttgtttgtaggca-ttttgccgttgtatgctattaacctgggtg 30493731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 30608553 - 30608409
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || | ||||||||||| ||| || |||||||||||| ||| |||||| ||||  |||| |||  |||||||||||||||| | ||||    
T  30608553 tattgaaagatcgacataagtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatatttta 30608454  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||  |||||||||||||||||||||    
T  30608453 tcatattatttgtaggca-ttttaccgttgtatgctattaacttgg 30608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 606256 - 606403
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||| | ||| || ||||||||||| | || |||||| |||| ||||| |||  ||||||||||||||||   ||||    
T  606256 tattgaaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagtttta 606355  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | ||||||||||||||||||||||    
T  606356 tcatattatttgtaggca-ttttgccattgtatgctattaacttgggtg 606403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 3913612 - 3913465
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||| | |||| |||||| |||| | |||||||  |||||||||||| ||||  ||||    
T  3913612 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggtttta 3913513  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| | ||||||||||||||||||||||    
T  3913512 tcatattatttgtaggca-ttttgccattgtatgctattaacttgggtg 3913465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 4010530 - 4010430
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    ||||||||| ||| ||||||||||||||| || ||||||| |||| |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||    
T  4010530 tcaattacatattcaatcaatgatttgggtgttgacgttgcagatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcatt 4010431  T
Q  203 t 203  Q
    |    
T  4010430 t 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 12170520 - 12170667
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || |||||||||||  ||| |||||| |||| |||||||||  |||||||||||| ||||  || |    
T  12170520 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttga 12170619  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| |||||  |||||||||||||||||||||||    
T  12170620 tcatattatttgtaggca-ttttgctgttgtatgctattaacttgggtg 12170667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 7515220 - 7515096
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    ||||||||| ||| || ||||||||| |||||| |||||| | || ||||||||| ||||| ||||||||||||  ||||||| ||||||||||||||||    
T  7515220 tcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtaggcatt 7515121  T
Q  203 tttgtcgttgtatgctattaacttgg 228  Q
    ||| | | ||||||||||||||||||    
T  7515120 tttct-gctgtatgctattaacttgg 7515096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6957119 - 6957323
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggtttt-attgaaagatcaactt 99  Q
    |||||||||| || ||||||||||| ||||||| |   |||||  ||| |||||||||| | |||| ||||||||||| |||  ||||| ||||| ||||    
T  6957119 cgtcgtctgattgtggtgttgtgttgttcgtcgttttatgtggtgtttcatttcacgtcttgttgcagtgttcatttgatttccattgatagatcgactt 6957218  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||| ||||||| |||||||||||| ||| || |||||||||||||| ||  ||   |||| |  ||||||| | ||||||| || ||||||||||    
T  6957219 cagtcaataacagattcaatcaatgatttaggcatcaacgttgtagattcgaaaatatggatattccaatgacttatattttatcacatgatttgtaggc 6957318  T
Q  200 atttt 204  Q
    |||||    
T  6957319 atttt 6957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 9380037 - 9380219
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | ||||| || |  ||||||  ||||||||||| ||| || ||||||| |||  || ||||||||||||| | ||| | ||||||    
T  9380037 tttgatttcacgtcttgttgcgatgattgtttggtacttattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtcaatgttgta 9380136  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||| |||||||  |||||| ||||| ||||| ||||||| |||||||||| ||| |||||||||||||| |||||| |||||    
T  9380137 gattcagaagcatgggtattttggtgatttagattttatcatattatttgtatgca-ttttgtcgttgtattctattatcttgg 9380219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 26588548 - 26588366
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | ||||||||||| |||||||  ||||||||||||||||||||||||| ||| ||| ||| ||||||||||  ||| |||||| |    
T  26588548 tttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaatcacacattcaattaatgatttggatgtcaacgttgca 26588449  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     || | |||||||  |||||| ||||| || || ||||||| ||||||| ||| || |||||  |||||||||| |||||||||    
T  26588448 aatccagaagcatgagtatttgggtgattttgattttatcatattatttttagaca-ttttgctgttgtatgctcttaacttgg 26588366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 31852231 - 31852092
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||  |||| | |||| |||| |||||||||  |||||  ||||| ||| | ||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttta 31852132  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| ||||||| ||| || |||||| |||||||||||||||    
T  31852131 tcatattatttatagaca-ttttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 34018529 - 34018733
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| |||||||    ||| | | |||||||||| ||| | | ||||||||| ||| |||  |||||||||||| |  |    
T  34018529 cgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtttgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatcgagat 34018628  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||| ||||||| ||| ||  ||||||||||||||| |||||| |||| |||||||||  ||||||| ||||||||   ||||||| |||||||||||||    
T  34018629 cagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggc 34018728  T
Q  200 atttt 204  Q
    |||||    
T  34018729 atttt 34018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 29319916 - 29319771
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||  |||| |||||| | || ||||||||| ||||||| |||||||||   ||||    
T  29319916 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagtttta 29319817  T
Q  183 tcaaatta-tttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||| |||||| ||| ||||  |||||||||||||||||||||    
T  29319816 tcatattattttgtaagca-ttttaccgttgtatgctattaacttgg 29319771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 68036 - 67892
Alignment:
Q  86 tgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatca 185  Q
    ||||||||| || ||||||||||||| ||| || ||| ||||||  |||  |||||| |||| ||||| |||  ||||||||| ||||||   |||||||    
T  68036 tgaaagatctacatcagtcaattacaaattcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaagttttatca 67937  T
Q  186 aattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  67936 tattatttataggca-ttttgccgttgtatgctattaacttgggtg 67892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 1523440 - 1523608
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||||||| |||| ||| || ||||  ||  || |||||||||||||  |||| |||||| |||| | |||||||  |||    
T  1523440 tgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggta 1523539  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtga 232  Q
    ||  ||||| ||||| ||||||| |||||||||||||| ||||||||| | |||||||||||||||||||    
T  1523540 ttctggtgatttagattttatcatattatttgtaggca-ttttgtcgtggaatgctattaacttgggtga 1523608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 30894652 - 30894795
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||  |||| | |||||| | |||||||| ||| ||||  ||||    
T  30894652 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttacagatccagaagca-tggtatttcgatgaattaggtttta 30894750  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||||||||||| || |||||  |||||||||||| |||||||    
T  30894751 tcatattatttgtagtca-ttttgctgttgtatgctatcaacttgg 30894795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 30776715 - 30776862
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||| | ||||||||||||||||  |||||| | ||   |||||||  |||||  ||||| ||||| ||||    
T  30776715 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagatttta 30776814  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||| | ||||||||||||||||||    
T  30776815 tcatattatttgtaggca-ttttgccgtggaatgctattaacttgggtg 30776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 8102778 - 8102925
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| |||||| |||| ||| ||| | ||||||||||||||||| |||||| |||| | ||| |||   ||||  | ||| ||||| ||||    
T  8102778 tattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagatttta 8102877  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||| | ||| ||||||||||||||    
T  8102878 tcatattatttgtaggca-ttttgccgtggaatgttattaacttgggtg 8102925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 1933725 - 1933591
Alignment:
Q  88 aaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaa 187  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||| |||||| |||| ||||| |||   ||||  ||||| ||| | ||||||| |    
T  1933725 aaagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcata 1933626  T
Q  188 ttatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    |||| | || |||||||| | |||||||||||||||    
T  1933625 ttatctatatgcatttttct-gttgtatgctattaa 1933591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 32327255 - 32327111
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||| | |||  |||||| |||| |||||||||  ||| || ||||| ||||  ||||    
T  32327255 tattgaaagatctacatcaatcaattacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggtttta 32327156  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||||||||||||||    |  ||||||||||||||||||||    
T  32327155 tcatattatttgtaggcatttt----gccgtatgctattaacttgggtg 32327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 3355088 - 3355270
Alignment:
Q  3 tcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttca 101  Q
    |||||| |||| ||||||||||| ||||||     ||||| | ||||||||| |||| | ||| ||||||| ||| |||  ||||||||| || || |||    
T  3355088 tcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtttgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggtcgacatca 3355187  T
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||| | ||| ||| |||||||||| |||| || ||| |||| |||||||||  ||||||| |||||||||| ||||||    
T  3355188 gtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatc 3355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 13546660 - 13546600
Alignment:
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||    
T  13546660 atttaggtgacttagaatttatcatattatttgtaggta-ttttgtcgttgtatgctattaa 13546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 7976205 - 7976078
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    ||||| ||||||| ||| ||| |||||| |||| ||||||||||| |||||||||  |||||  ||||| ||| | ||||||| |   |||||||||| |    
T  7976205 tcaatcacagattcaattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggca-t 7976107  T
Q  203 tttgtcgttgtatgctattaacttgggtg 231  Q
    |||| ||||||||||||||||||| ||||    
T  7976106 tttgccgttgtatgctattaacttaggtg 7976078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 31296911 - 31297021
Alignment:
Q  122 atgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctatt 221  Q
    ||||||| | |||| |||||| |||| |||||||||  |||||  ||||| ||| | ||||||| ||| |||||||||| ||||||||||||||||||||    
T  31296911 atgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtaggca-ttttgtcgttgtatgctatt 31297009  T
Q  222 aacttgggtgat 233  Q
    || |||| ||||    
T  31297010 aatttggatgat 31297021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 14175043 - 14174959
Alignment:
Q  149 cggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||||||| || ||||||||||||||   ||||||| |||||||||||||||||||  |||| |||||| |||||||| ||||||    
T  14175043 cggaagcatgtgaatttcggtgacttatgttttatcatattatttgtaggcattttt-ccgttttatgctgttaacttgagtgatg 14174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 14179579 - 14179495
Alignment:
Q  149 cggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||||||| || ||||||||||||||   ||||||| |||||||||||||||||||  |||| |||||| |||||||| ||||||    
T  14179579 cggaagcatgtgaatttcggtgacttatgttttatcatattatttgtaggcattttt-ccgttttatgctgttaacttgagtgatg 14179495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 14846193 - 14846113
Alignment:
Q  149 cggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||||||||| || |||| ||||||||||  ||||||| |||||||||||||| |||||  ||| ||||||||||||||||||    
T  14846193 cggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggca-ttttgctgttttatgctattaacttgggt 14846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 9341593 - 9341542
Alignment:
Q  179 tttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||||    
T  9341593 tttatcatattgtttgtaggcatttt-gtcgttgtatgctattaacttgggtg 9341542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 32802676 - 32802745
Alignment:
Q  161 tatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||| | ||||||| |||||||||||| | |||| |||||||||| |||||| |||||||    
T  32802676 tatttcggtgacttaaattttatcatattatttgtaggta-ttttatcgttgtatgatattaaattgggtg 32802745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11321590 - 11321461
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| ||||||||||| ||||| |  | |  || | |||||||||||||| | ||| ||||||| ||| |||  |||||||||||| || |    
T  11321590 cgtcgtcttagtgcggtgttgtgttgttcgtggtcctgcatgacgtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcgacat 11321491  T
Q  100 cagtcaattacagatttaatcaatgatttg 129  Q
    |||||||||||| ||| ||||||| |||||    
T  11321490 cagtcaattacaaattcaatcaattatttg 11321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 24227816 - 24227724
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    ||||||| |||||||||||||| | |  ||||||||||||  ||  |||||||| ||| ||||||||||||||||  || |||||||||||||    
T  24227816 gtgtggcgtttgatttcacgtcttatcacggtgttcatttaattcatattgaaatatcgacttcagtcaattacaatttcaatcaatgatttg 24227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 28981247 - 28981376
Alignment:
Q  101 agtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggca 200  Q
    ||||||| ||||||| |||||||||| | | |||| || ||| |||| || ||| ||  |||||| ||| | ||||| ||||||| |||  ||||||| |    
T  28981247 agtcaatcacagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatattgcttgtaggaa 28981346  T
Q  201 tttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| || |||||||||||||||||| ||||    
T  28981347 tttt-gttgttgtatgctattaactttggtg 28981376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 29743045 - 29743179
Alignment:
Q  83 tattgaaagatcaacttcag----tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaa 178  Q
    ||||||||||||||||| ||    ||||||  ||||| |||||||||  |||||||| |||||| |||| |||||||    |||||  ||||| |||||     
T  29743045 tattgaaagatcaactttagttaatcaattgtagattcaatcaatgacgtgggcgtcaacgttgcagatccggaagctagagtattctggtgatttagat 29743144  T
Q  179 tttatcaaattatttgtaggcatttttgtcgttgta 214  Q
     |||||| ||||||| |||||| |||||||||||||    
T  29743145 cttatcatattatttataggca-ttttgtcgttgta 29743179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 223
Target Start/End: Complemental strand, 32191754 - 32191629
Alignment:
Q  97 cttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgta 196  Q
    ||||||||||| ||| ||| |||||||||||||| || | |||||| | || || ||||||  | |||  ||||| ||||| ||||||| |  |||||||    
T  32191754 cttcagtcaatcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttgta 32191655  T
Q  197 ggcatttttgtcgttgtatgctattaa 223  Q
    |||| ||||| | ||||||||||||||    
T  32191654 ggca-ttttgccattgtatgctattaa 32191629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 21426620 - 21426577
Alignment:
Q  187 attatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||    
T  21426620 attatttgtagacatttt-gccgttgtatgctattaacttgggtg 21426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 53811099 - 53811246
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||    
T  53811099 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagtttta 53811198  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  53811199 tcatattatttgtaggca-ttttggcgttgtatgctattaacttgggtg 53811246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 56040684 - 56040540
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||| |||||| || ||||||||||||| ||| || |||||||||||||| | |||||| |||| | |||||||  |||||||||||||||||  ||||    
T  56040684 tattggaagatctacatcagtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggtttta 56040585  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||    
T  56040584 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgg 56040540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 2520850 - 2520997
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||||||||| ||||| ||||    
T  2520850 tattgaaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagatttta 2520949  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  |||||||||||||| ||||| ||||||||||||||||||||||||    
T  2520950 tcgtattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 2520997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12199814 - 12199610
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    ||||||||||||| || |||||||| ||| ||| |  |||  || ||||||||  |||| | ||||||||||| ||| |||  |||||||| ||||||||    
T  12199814 cgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagcttttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaactt 12199715  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||| ||||||||| |||||| |||||| |||||||||||  ||||||||||||||  | |||| || |||||||||||||||| ||||||||||||     
T  12199714 cagtcagttacagattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgacttagaatttatcatattatttgtaggt 12199615  T
Q  200 atttt 204  Q
    |||||    
T  12199614 atttt 12199610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 21662508 - 21662651
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||||| ||||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  21662508 tattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 21662607  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||||||||| || ||| || |||||||||||||||||||    
T  21662608 tcatattatttgtagacactttggt-gttgtatgctattaacttg 21662651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 21671272 - 21671415
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||||| ||||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  21671272 tattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 21671371  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||||||||| || ||| || |||||||||||||||||||    
T  21671372 tcatattatttgtagacactttggt-gttgtatgctattaacttg 21671415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 22611254 - 22611401
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||    
T  22611254 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagtttta 22611353  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||| |||||| |||||||    
T  22611354 tcatattatttgtaggca-ttttgccgttgtatggtattaaattgggtg 22611401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 32766585 - 32766732
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||| ||||||| || ||||||||||||| ||| |||||||||||||| |||| | |||| |||| ||||| |||  ||||||||||||||||   ||||    
T  32766585 tattaaaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagtttta 32766684  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| || |||||||||||||||||||||||||||    
T  32766685 tcatattatttgtaggca-ttatgtcgttgtatgctattaacttgggtg 32766732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 52060961 - 52060822
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||   |||||||   ||||||  |||||| |||||||    
T  52060961 tattgaaagatcaacttcagtcaattacagattcaatcaatgatttgggcgttgatgttgtagatctagaagcatggatatttcaatgactttgaattta 52060862  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| ||| |||||||||| |||||| ||||||| |||||||    
T  52060861 tcatattttttgtaggca-ttttgttgttgtatactattaa 52060822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 45418617 - 45418730
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    |||||||||||||||| || |||||| |||| || ||||| | |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  45418617 aatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggca-ttttgtcgttgtatg 45418715  T
Q  217 ctattaacttgggtg 231  Q
    |||||||| ||||||    
T  45418716 ctattaacatgggtg 45418730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 19853550 - 19853403
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||   |||||||||||||||   ||||    
T  19853550 tattgaaagatctacatcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagtttta 19853451  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| ||||| ||||||||||||||||||||||||    
T  19853450 tcatattatttctaggca-ttttgccgttgtatgctattaacttgggtg 19853403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 53444189 - 53444336
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| | |||| |||| ||||||||| || |||||||||||||||  ||||    
T  53444189 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 53444288  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||  ||||||  |||| |||||||||||||||||||    
T  53444289 tcatattatttgtagatattttt-ccgttttatgctattaacttgggtg 53444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 56156763 - 56156533
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| |||||||    ||||||| ||||||||| |||| | | ||||||||| ||| |||  | ||||||||| ||| |    
T  56156763 cgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaaagattaacat 56156664  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||||||| ||| || |||||||| ||||||| || ||| ||||  |||||||| || ||||||||||||||   |||||||| ||||||||||||    
T  56156663 cagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatgtgaatttcggtgacttatgttttatcaatttatttgtaggc 56156564  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||| |||| ||||||||| || ||||||    
T  56156563 a-ttttgccgttttatgctatttacctgggtg 56156533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 52944361 - 52944526
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||| ||  ||||||||||||| ||||||||||| ||||||| |||| ||||||||| |||| |||||| |||| |||||||||  ||    
T  52944361 ttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggt 52944460  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||  ||||| ||||| || |||| ||| |||||||||| |||||| ||| ||||||||||||||||    
T  52944461 attctggtgatttagatttcatcatattttttgtaggca-ttttgtagttatatgctattaacttgg 52944526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 8670556 - 8670677
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| |||||| |||| || |||||| || ||||||||||||||| |||||    
T  8670556 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggattta 8670655  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| |||||||| |||||||||    
T  8670656 tcatattatttgaaggcatttt 8670677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 54021931 - 54022073
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| ||||||||||||||  ||| |||||| |||| || || |||   ||||||||||||||||| ||||    
T  54021931 tattgaaagatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagatttta 54022030  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||||||||| ||  |||||||||||||| ||||||||||    
T  54022031 tcatattatttgtagaca--tttgtcgttgtatgttattaacttg 54022073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 10496406 - 10496553
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||||||||||||| ||| || |||||||||||||||| || ||| |||| || ||||||  |||||||||||| ||||  ||||    
T  10496406 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggtttta 10496505  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| |||||  || ||||||||||||||||||||    
T  10496506 tcatattatttgtaggca-ttttgctgtcgtatgctattaacttgggtg 10496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 37030289 - 37030479
Alignment:
Q  41 tggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacg 139  Q
    |||| |||||||||| ||| | | ||||||| | |||||||| |||  |||||||||||||| |||| |||||||| |||||||||||||| | ||||||    
T  37030289 tggcgtttgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaatacagattcaatcaatgatttggacatcgacg 37030388  T
Q  140 ttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||    || |||  ||||||| ||||||||||| |||||| ||||||||||| || ||| | | ||||||||||||||||||||||    
T  37030389 ttgcagatcgaaaaacatgggtatttcagtgacttagaaattatcatattatttgtagaca-tttagccattgtatgctattaacttgggtg 37030479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 24099105 - 24098962
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| |||| ||||| |||  ||||||| |||||||||  ||||    
T  24099105 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggtttta 24099006  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||||||||||||| ||||| ||||| |||||||||||||||    
T  24099005 tcatattatttgtaggca-ttttgccgttg-atgctattaacttgg 24098962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 21686280 - 21686133
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||| ||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  |||||| ||||| ||||  ||||    
T  21686280 tattgaaagatctacatcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggtttta 21686181  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| || |||||| ||||||||||||||    
T  21686180 tcatattatttgtaggca-ttttgccgctgtatgttattaacttgggtg 21686133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 47320434 - 47320303
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    ||||||||| ||||||| |||||||||||||| |||| |||||| |||| | ||||||   |||||  ||||| ||||| | ||||| ||||||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtagg 47320335  T
Q  199 catttttgtcgttgtatgctattaacttgggtg 231  Q
    || ||||| ||||||||||||||||||||||||    
T  47320334 ca-ttttgccgttgtatgctattaacttgggtg 47320303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 29120375 - 29120276
Alignment:
Q  125 atttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaac 224  Q
    ||||||||||| || ||| ||||  ||||||||  |||||||||| ||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtaggca-ttttgtcgttgtatgctattaac 29120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 232
Target Start/End: Original strand, 9178378 - 9178572
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcg 136  Q
    ||||||| ||||||||| |||| | | ||| ||||| ||| |||  |||||||||||| || ||| ||||||||| ||  ||||||| ||||| || ||     
T  9178378 gtgtggcgtttgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaaagatcgacatcaatcaattacaaatccaatcaataatttgagcatca 9178477  T
Q  137 acgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtga 232  Q
    |||||| ||||  |||||||   ||||||| | ||||| |  ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  9178478 acgttgcagatctggaagcaaaagtatttcagagacttcggttttatcatattatttgtaggca-ttttgtcgttgtatgctattaacttgtgtga 9178572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 33921159 - 33921269
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    ||||||| ||||| ||||| |||||| |||| |||||||||  ||||||| |||||||||| ||||||| |||||||||||||| || | | ||||||||    
T  33921159 aatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggca-ttgtatagttgtatg 33921257  T
Q  217 ctattaacttgg 228  Q
    ||||||||||||    
T  33921258 ctattaacttgg 33921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 22038878 - 22038712
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | ||| |||| || |||||||  |||||||||||| |||||||||||| ||| ||| ||| |||||||| | | || | |||| |    
T  22038878 tttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattcaataaatgattttgacatcaatgttgca 22038779  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgtt 211  Q
    ||| | ||||||| ||||||||||||| ||| | ||||||| | |||||||||||||||||| ||||    
T  22038778 gatccagaagcatgtgtatttcggtgatttaaattttatcataatatttgtaggcatttttgccgtt 22038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 26090950 - 26090804
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttag----aatt 180  Q
    |||||||||| || ||||||||||| | ||| ||  ||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||    | ||    
T  26090950 ttgaaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatttcggtgacttagatatattt 26090851  T
Q  181 tatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||| |||||||| ||  | | |||||||||||||||||||| ||||    
T  26090850 tatcatattatttgcagata-tattgtcgttgtatgctattaatttgg 26090804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 43510270 - 43510414
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||| ||||| ||| ||  |||||||||| |||| | |||| |||| | |||||||  ||||||||||||||||   ||||||    
T  43510270 ttgaaagatctacatcagtca-ttacaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatc 43510368  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| |||||||||||||||  |||||||||||||    
T  43510369 atattatttgtaggca-ttttgtcgttgtatgtcattaacttgggtg 43510414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 33332627 - 33332486
Alignment:
Q  64 tgcggtgttcatttggtttt-attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| ||| ||||| ||||||||||||||||||| |||| ||||||| |||||||||||||| |||| |||||| |||| |  ||| ||  | |    
T  33332627 tgcggtgttcgtttcgtttttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 33332528  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||| | ||| ||||| ||||||| |||||||||| |||||||    
T  33332527 ttttgatgatttagattttatcatattatttgtatgcatttt 33332486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 13634186 - 13634333
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||| ||||||| |||| |||||| |||| ||||| |||  ||||||| |||| ||||  ||||    
T  13634186 tattgaaagatctacatcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggtttta 13634285  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  |||||||||||  | ||||| ||||||||||||||||||||||||    
T  13634286 tcttattatttgtagtta-ttttgccgttgtatgctattaacttgggtg 13634333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 17949362 - 17949215
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||| | ||||| |||||| |||| |||||| ||  |||||| | ||||||||  ||||    
T  17949362 tattgaaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggtttta 17949263  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||| |||| ||| ||||||  ||||||| ||||||||||||||    
T  17949262 tcatattatatgtatgca-ttttgttcttgtatgttattaacttgggtg 17949215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 17953214 - 17953067
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||| | ||||| |||||| |||| |||||| ||  |||||| | ||||||||  ||||    
T  17953214 tattgaaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggtttta 17953115  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||| |||| ||| ||||||  ||||||| ||||||||||||||    
T  17953114 tcatattatatgtatgca-ttttgttcttgtatgttattaacttgggtg 17953067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 31891345 - 31891178
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||||||| ||||  ||||| |||| ||| ||| || | |||||||||||||| |||||| | || | |||||||  |||    
T  31891345 tgcggtgttcgtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagta 31891246  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || || | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  31891245 ttctggtgatttagatttcattatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 31891178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 4142788 - 4142669
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| |||| | ||| |||  ||||||||||||||||   ||||||    
T  4142788 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatc 4142689  T
Q  185 aaattatttgtaggcatttt 204  Q
    | ||||||||||| ||||||    
T  4142688 atattatttgtagacatttt 4142669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 10258932 - 10258813
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || | ||||||||||| ||| ||||||||||||||||| | |||||| | |  |||||||||   ||||| ||||||||||| ||||||    
T  10258932 ttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgcatacccggaagcatgaatattttggtgacttagattttatc 10258833  T
Q  185 aaattatttgtaggcatttt 204  Q
    | ||||||||||| ||||||    
T  10258832 atattatttgtagacatttt 10258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 43095699 - 43095849
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||| |||||| || |||||||||||||  || |||||||||||||| |||| ||  || |||| |||||||||  | |||||  ||||||||| ||||    
T  43095699 tattggaagatcgacatcagtcaattacaagttaaatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgacttagatttta 43095798  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| || ||||||||| | |||||| ||||||||||||||| |||| |||||    
T  43095799 tcatatcatttgtaggta-ttttgtagttgtatgctattaatttggatgatg 43095849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 231
Target Start/End: Original strand, 35348396 - 35348525
Alignment:
Q  101 agtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggca 200  Q
    ||||||||||| ||| || ||||||| |||  ||| |||||| |||| ||||||||| || |||||  ||||||||  ||||||| ||||||||||||||    
T  35348396 agtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtaggca 35348495  T
Q  201 tttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| | || |||||||||||||||||||    
T  35348496 -ttttgccattttatgctattaacttgggtg 35348525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 48351242 - 48351093
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatt 164  Q
    |||||||| |||||||| ||||||||||||| ||||||||||| ||| ||| || | ||||||||| ||||  ||||| ||||  ||||||||  |||||    
T  48351242 cggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacgtccgcgttgcagatctggaagcatgagtatt 48351143  T
Q  165 tcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtat 215  Q
     |||||| ||||| | |||||  ||||||||| ||| ||||||||||||||    
T  48351142 acggtgatttagattgtatcatgttatttgtatgca-ttttgtcgttgtat 48351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 51888287 - 51888102
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| | || | ||||||||||| |||||||  ||||||||||||||||||| ||||| ||| |||||||||||||||| |  ||  |||||| |    
T  51888287 tttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatcaatcacaaatttaatcaatgattttgatgttaacgttgca 51888188  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||  | ||||||  |||||  ||||| ||||| ||||||| |||||||||||||  ||||| | ||| ||||||||||||| ||||    
T  51888187 tatctgaaagcatgagtattctggtgatttagattttatcatattatttgtaggc-gttttgccattgcatgctattaacttaggtg 51888102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 18935811 - 18935974
Alignment:
Q  46 tttgatttcacgtccttt----tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgt 140  Q
    ||||||||||| ||||||    |||||||||| |||||||  ||||||||||| |||||||| |||| | | ||| ||| |||||||||||| || ||||    
T  18935811 tttgatttcacatcctttgttgtgcggtgttcgtttggttcgtattgaaagattaacttcagacaatcaaaaattcaattaatgatttgggcatcaacgt 18935910  T
Q  141 tgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    || |||| |  ||||||  |||||  ||||| ||||| || |||| ||||||||||||||||||    
T  18935911 tgcagatccaaaagcataggtattctggtgatttagatttcatcatattatttgtaggcatttt 18935974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 36161744 - 36161929
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||| ||||  | ||||||||||| ||| |||  ||| ||||||| |  |||||||||| ||| ||| |||||||||||||| || | |||||  |    
T  36161744 tttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagtttcagtcaatcacatattcaatcaatgatttggacgccaacgttaca 36161843  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| || || |||  ||||||  |||| ||||| ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||    
T  36161844 gatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtaggca-tttggtcgttatatgttattaacttgggtg 36161929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 6155264 - 6155114
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagca---tttgtatttcggtgacttagaat 179  Q
    |||||||||||||  |||||||||| |||  || |||| ||||||| | |||  |||||| |||| ||||||||   |   ||||  ||||| ||||| |    
T  6155264 tattgaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatattctggtgatttagatt 6155165  T
Q  180 ttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  6155164 ctatcatattatttgtaggcatttt-gtcgttgtatgctattaacttgggtg 6155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 36194760 - 36194923
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||  |||| ||| ||| |||||||||||||  | || | |||| |||| | ||| |||  |||    
T  36194760 tgcggtgttcgtttggttcgtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttga-catcaaagttgcagatccagaaacatgggta 36194858  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||  ||||| ||||| || |||| |||||||||||||||||| | |||||||||||||||||||||    
T  36194859 ttctggtgatttagatttcatcatattatttgtaggcatttt-gccgttgtatgctattaacttgg 36194923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 43853542 - 43853658
Alignment:
Q  111 agatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgt 210  Q
    |||||| ||||||||||||  |||| |||||| ||||||||||||||  |||||  | ||| ||||| ||||||| |||||||||  ||| |||||| ||    
T  43853542 agattttatcaatgatttgtacgtcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatattatttgtcagca-ttttgttgt 43853640  T
Q  211 tgtatgctattaacttgg 228  Q
    |||||| |||||||||||    
T  43853641 tgtatgttattaacttgg 43853658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 27651995 - 27652157
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| ||| || |||| ||| ||| |||||||||||||||  || |||||| |||| | |||||||  |||    
T  27651995 tgcggtgttcgtttggttcgtattgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggta 27652094  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||   |||  ||||| || |||| ||||||||||| || ||||| ||||||||||||||||||||    
T  27652095 ttctagtg-tttagatttcatcatattatttgtagaca-ttttgccgttgtatgctattaacttg 27652157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 29960987 - 29960840
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||| | ||| || | ||||||| ||| || |||||| |||| ||||| |||   |||||  |||| ||||| ||||    
T  29960987 tattgaaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgatttagatttta 29960888  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| | |||||||||||| ||||| ||||||||||| ||||||||||||    
T  29960887 tcatactatttgtaggca-ttttgccgttgtatgcttttaacttgggtg 29960840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 37465637 - 37465700
Alignment:
Q  167 ggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| ||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  37465637 ggtgatttagattttatcatattatttgtaagcatttt-gtcgttgtatgctattaacttgggtg 37465700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 22305582 - 22305516
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    |||||| | ||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  22305582 gtattttgatgacttagattttatcatattatttgtaggtatttt-gtcgttgtatgctattaacttg 22305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 26633709 - 26633571
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||||| |||||| ||| || ||||||||||| |||| | |||| |||| |||||||||   |||||| |||||||||  ||||    
T  26633709 tattgaaagatctacatcagtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttaggtttta 26633610  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctatta 222  Q
    ||| ||||  | |||||| ||||  |||||||||||||||    
T  26633609 tcatattaaatataggca-ttttaccgttgtatgctatta 26633571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 9048714 - 9048882
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||||||| | ||||||||| | ||||||| ||| ||| ||| ||||||||||||| ||||| |||||| | ||  | || |||  ||    
T  9048714 ttgcggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattcaatcaatgatttgagcgtcaacgttgcaaatctgaaaacatgggt 9048813  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||  | ||| ||| | ||||||| |||||||||||||| |||||||||  | |||||| ||||||||||    
T  9048814 attctgatgatttaaattttatcatattatttgtaggca-ttttgtcgtcatgtgctataaacttgggtg 9048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 216
Target Start/End: Original strand, 55228058 - 55228181
Alignment:
Q  92 atcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattat 191  Q
    ||||||||| |||||| || ||||| |||||||||||| ||||| |||||||| || || ||||||  || ||   |||| ||||| || |||| |||||    
T  55228058 atcaacttcggtcaatcacggatttcatcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatattat 55228157  T
Q  192 ttgtaggcatttttgtcgttgtatg 216  Q
    |||||| || |||||||||||||||    
T  55228158 ttgtagaca-ttttgtcgttgtatg 55228181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 2069656 - 2069497
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| | || | ||||||| |||||||||||  |||||||| ||||  || ||||||| | ||||| ||||||| ||||||| ||| |||||| |    
T  2069656 tttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgtcaacgttgca 2069557  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
     |||  |||||||  |||||  ||||| ||| | ||||||| |||||||||| |||||||    
T  2069556 aatttagaagcatgggtattatggtgatttatattttatcatattatttgtatgcatttt 2069497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 4937901 - 4937956
Alignment:
Q  80 ttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    ||||||||||||||||||||||||| |||| | ||| |||||||||||| ||||||    
T  4937901 ttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttaggcgtc 4937956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 36184636 - 36184746
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    |||||||||||| || ||| |||||||||||  ||| ||||   ||||  ||| |||| || ||||||| | ||||| |||||||||| |||||||||||    
T  36184636 aatcaatgattttggtgtcaacgttgtagatcaggaggcataaatattatggtcactttgattttatcatactatttctaggcatttt-gtcgttgtatg 36184734  T
Q  217 ctattaacttgg 228  Q
    ||||||||||||    
T  36184735 ctattaacttgg 36184746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 36700381 - 36700482
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    ||||||||||||||||||| |||||| | ||  |||||| |  |||||||| ||||||| | ||||||| |||||||  | ||| |||||||||||||||    
T  36700381 aatcaatgatttgggcgtcaacgttgcaaatctggaagcgtgggtatttcgatgacttaaattttatcatattatttaaaagca-ttttgtcgttgtatg 36700479  T
Q  217 cta 219  Q
    |||    
T  36700480 cta 36700482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 47158295 - 47158348
Alignment:
Q  82 ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtc 135  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||||||| ||||    
T  47158295 ttattgaaagattaacttcagacaatcacagattcaatcaatgatttggccgtc 47158348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 22300922 - 22301014
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttaga 177  Q
    ||||||||||| ||| ||||||| ||||||| |||| ||||||||| || |||||||| |||| || || |||  |||||| ||||| |||||    
T  22300922 ttgaaagatcagctttagtcaatcacagattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttaga 22301014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 48257593 - 48257526
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||||||||||||    ||||||| |||||||||||| ||||| | |||||||||||||||||||||    
T  48257593 gtatttcggtgacttgagttttatcatattatttgtaggtatttt-gccgttgtatgctattaacttgg 48257526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 22806685 - 22806751
Alignment:
Q  161 tatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||||||||||| |  |||||| |||||||||| ||| |||||| |||||||| |||||||||||    
T  22806685 tatttcggtgacttatatattatcatattatttgtaagca-ttttgttgttgtatgttattaacttgg 22806751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 28857452 - 28857616
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||| ||  ||||||||||||| ||||||||||| ||| ||| |||  ||||||||| || | |||||  |||| |||||||| | ||    
T  28857452 ttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacatattcaattgatgatttggacgccaacgtttcagatccggaagca-tggt 28857550  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     ||  ||||| ||||| || |||| ||| |||||||| | ||||| | || ||||||||||||||||    
T  28857551 tttctggtgatttagatttcatcatattttttgtaggta-ttttgcccttatatgctattaacttgg 28857616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 31359785 - 31359671
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatc-aatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattt 181  Q
    |||| |||||||||||| ||||||| ||||||| |||| ||  ||||||  ||| |||||| |||||| ||||||| |||| |  ||||| ||||| |||    
T  31359785 tatttaaagatcaactttagtcaatcacagattcaatcaaacaatttggaagtcaacgttgcagattccgaagcatgtgtaatctggtgatttagatttt 31359686  T
Q  182 atcaaattatttgta 196  Q
     ||| ||||||||||    
T  31359685 ctcatattatttgta 31359671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 44596756 - 44596878
Alignment:
Q  106 attacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcattttt 205  Q
    |||||| ||| |||||||||||  | |||| ||||||  |||||| || |||  |||||||| ||| ||| | ||||||| |||||||||||  |||||     
T  44596756 attacaaattcaatcaatgatt--gacgtcaacgttgctgattcgaaaacataggtatttcgatgatttacattttatcatattatttgtagctatttta 44596853  T
Q  206 gtcgttgtatgctattaacttgggtg 231  Q
      ||||||||||||||||||||||||    
T  44596854 c-cgttgtatgctattaacttgggtg 44596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 11299969 - 11299901
Alignment:
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||   ||||||| |||||| ||||||| ||||| |||| |||| ||||||||||||||    
T  11299969 atttcggtgacttatgttttatcatattattcgtaggca-ttttggcgttttatgttattaacttgggtg 11299901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 9643421 - 9643505
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    ||||||||| | || | |||| |||||| |||||||  |||| |||||||||||||||||||| ||| ||| ||| |||||||||    
T  9643421 tttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatcacatattcaattaatgatttg 9643505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 52978892 - 52978959
Alignment:
Q  160 gtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    |||||||||||||||||| ||||| | |||||||||||  | ||||||| ||||||  |||||||||||    
T  52978892 gtatttcggtgacttagattttattatattatttgtagtta-ttttgtcattgtattttattaacttgg 52978959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 48199810 - 48199948
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  ||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||||||| | || | ||||||| || ||||    
T  48199810 ggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgcaaatccagaagcatgtgcattt 48199909  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  48199910 cggtgacttagaatttatcatattatctgtaggcatttt 48199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 14859460 - 14859687
Alignment:
Q  4 cgtctgagtgaggtgttgtgttcttcgtcgatca-gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttca 101  Q
    |||||||||| ||||||||||| |||||| |||  ||||| ||||| ||||  | || | |||||||||||||||||||  ||||||||||||| |||||    
T  14859460 cgtctgagtgcggtgttgtgttgttcgtc-atcttgtgtgacatttaattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttca 14859558  T
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
     ||||| ||| ||| |||||||||||||| |||| |||||| |||| | |||||||  |||||| ||| | ||||| ||||||  |||||| || ||||     
T  14859559 atcaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagattttatcgtattattggttggca- 14859657  T
Q  202 ttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||||||||||||||||||||    
T  14859658 ttttgtcgttgtatgctattaacttgggtg 14859687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 6954734 - 6954587
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| | | || |||| |||||||||  ||||||||||||||||   ||||    
T  6954734 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatgtttta 6954635  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6954634 tcaaattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 6954587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 21533847 - 21533700
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||||| | |||| ||| || |||| ||||||||||| |||||| |||| |||||||||  |||||||||||||||||  ||||    
T  21533847 tattgaaagatctacatcagtcgactacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggtttta 21533748  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  21533747 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 21533700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 33579930 - 33580077
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| |||| ||||||||  || |||||||||| ||||  ||||    
T  33579930 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggtttta 33580029  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| |||| |||||||||||||||||||    
T  33580030 tcatattatttgtaggca-ttttgccgttttatgctattaacttgggtg 33580077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 51303701 - 51303534
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||| ||||||||||||| |||| | |||| ||| ||| ||||||||||||||||||| |||||| |||| | |||||||  |||    
T  51303701 tgcggtgttcgtttggtttgtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggta 51303602  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  51303601 ttctggtgatttagatttcatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 51303534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 21431663 - 21431810
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||| ||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||    
T  21431663 tattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttta 21431762  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||| ||||||||||||||    
T  21431763 tcatattatttgtaggca-ttttgccgttgtatgatattaacttgggtg 21431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 53807896 - 53807749
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||| | || | ||||||   |||||  ||||| ||||| | ||    
T  53807896 tattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattata 53807797  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  53807796 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 53807749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 19339226 - 19339371
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||| || ||| | |||| |||| | |||||||  ||||||| |||||||||| ||||    
T  19339226 tattgaaagatcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttc-gtgacttagatttta 19339324  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||| ||||| |||||||| ||||||||||||||| |||||||||||||    
T  19339325 tcatattatctgtaggca-ttttgtcgttgtatgttattaacttgggt 19339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 20465089 - 20464859
Alignment:
Q  3 tcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttca 101  Q
    |||||| |||||||||||||||| |||||||    ||  ||| ||||||||  |||| | | |||||||||||||   |  |||||||||||| | ||||    
T  20465089 tcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttca 20464990  T
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
    |||||||||| ||| ||| ||||||||||||||| | |||| ||||| | ||||||  |||||||||||||||| | ||||||| |||||||||  |||     
T  20464989 gtcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattatttgtgtgca- 20464891  T
Q  202 ttttgtcgttgtatgctattaacttgggtgat 233  Q
    ||||||||| |||||||||||||||| |||||    
T  20464890 ttttgtcgtcgtatgctattaacttgtgtgat 20464859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 54149042 - 54149191
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||| ||||| |||| | |||||||||||||||| |||||| |||| |||||||||   |||||||||||||| || ||||    
T  54149042 tattgaaagatctacatcaatca-ttacaaatttcaccaatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggatttta 54149140  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| || |||||||||||||||||||| |||||||||    
T  54149141 tcatattatttgtaggca-ttatgtcgttgtatgctattaacctgggtgatg 54149191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 40556754 - 40556899
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||||| || ||||||||| ||||||| |||||||||   ||||||    
T  40556754 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatc 40556853  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| |||||||||||||  |||||||||    
T  40556854 atattatttgtaggca-ttttgccgttgtatgctatgcacttgggtg 40556899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 628981 - 628814
Alignment:
Q  63 ttgcggtgttcatttggttttattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    ||||||||||| || | |  ||||||||||||| ||||||||||| ||||||| |||||||||||||| | || ||||||||||| | ||||||   |||    
T  628981 ttgcggtgttcgttggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgtagatccagaagcaagagta 628882  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| | ||||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  628881 ttctggtgatttagattatatcatattatttgtaggca-ttttgccgttgtattctattaacttgggtg 628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 51923757 - 51923924
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||| ||||  || ||| |||||||||||||| |||| |||||| |||| | |||||||  |||    
T  51923757 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggta 51923856  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  51923857 ttctggtgatttagatttcatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 51923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 8914762 - 8914912
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||| | |||||| |||| ||| ||| ||||||||||||||||||| |||||| |||| | |||| || ||||||  ||||| ||||| || |    
T  8914762 tattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttca 8914861  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  8914862 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgagtgatg 8914912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 38545850 - 38545996
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    ||||||||||| || ||||||||||||| ||| || |||||||||||||||| |||||| |||| || || |||  | |||| ||||||||||  |||||    
T  38545850 attgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttat 38545949  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||||||||||||| ||||| |||| |||||||||||||||||||    
T  38545950 catattatttgtaggca-ttttgccgttttatgctattaacttgggtg 38545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 9998519 - 9998664
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||  ||  ||||||| |||| | |||||||  ||||||||||||||||   ||||||    
T  9998519 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaagttttatc 9998618  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  9998619 atattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 9998664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 32701541 - 32701685
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || |||  |||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||  ||||||||| ||||||   ||||    
T  32701541 tattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagcatgggtatttcggcgacttaagtttta 32701640  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    | | ||||| |||||||| ||||| ||||||||||||| |||||||    
T  32701641 tgatattatctgtaggca-ttttgccgttgtatgctatgaacttgg 32701685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 46304558 - 46304415
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| ||| || ||||||||||||| ||| || ||||||||| |||||| || ||| |||| |||||||||  |||||||||||||||||  ||||    
T  46304558 tattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtatttcggtgacttaggtttta 46304459  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| ||||| |||||||| | ||| ||||||||||||||||||||    
T  46304458 tcatattatatgtaggca-tgttgccgttgtatgctattaacttg 46304415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 23799931 - 23799801
Alignment:
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
    |||||||||||| ||| |||||||||||| |||||| |||||| |||| || || |||  |||||||  ||||||||| ||||||| |||||||||||||    
T  23799931 cagtcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggc 23799832  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
    | ||||| ||||||||| ||||||||||||||    
T  23799831 a-ttttgccgttgtatgttattaacttgggtg 23799801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 52923137 - 52923011
Alignment:
Q  101 agtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggca 200  Q
    ||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||  ||||||||||||||||   ||||||| ||||||||||||||    
T  52923137 agtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca 52923038  T
Q  201 tttttgtcgttgtatgctattaacttgg 228  Q
     ||||  |||||||||||||||||||||    
T  52923037 -ttttaccgttgtatgctattaacttgg 52923011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 21313048 - 21313233
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||  | | ||||||||| ||| |||| |||||||| |||    ||||||||||||| ||| |||||||||||||| |||| |||| | |    
T  21313048 tttgatttcacgttttgtcgcggtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattcaatcaatgatttggacgtcaacgtagca 21313147  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||  | || |||  |||||||||||||||||| ||||||| ||||||||||| || ||||| ||||||||||||||||||||||||    
T  21313148 tatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtagcca-ttttgccgttgtatgctattaacttgggtg 21313233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 29239355 - 29239457
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | ||| ||||||| |||||||  ||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  29239355 tttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtcaatcacagatttaatcaatgatttggacgtcgacgttgta 29239454  T
Q  145 gat 147  Q
    |||    
T  29239455 gat 29239457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 35175416 - 35175597
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||| ||| | ||||||||||| |||||||| ||||||||||||| ||||||||||| ||| ||| |||||||||||||| | || |||||| |    
T  35175416 tttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaatcaatgatttggacatcaacgttgca 35175515  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| || || |||  |||||  | ||| ||| | || |||| ||| |||||||||| ||||||| ||||||||||||||||||    
T  35175516 gatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtaggca-ttttgtcattgtatgctattaacttg 35175597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 47042086 - 47041937
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||| | ||||||| ||||| ||| || ||||| |||||||||| |||||| |||| ||||||||| || |||| ||||||||||  || |    
T  47042086 tattgaaagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttca 47041987  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgat 233  Q
    ||| |||||||||||||  |||| ||||| |||||||||||||| ||||||    
T  47041986 tcatattatttgtaggc-gttttatcgttttatgctattaacttaggtgat 47041937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 9797572 - 9797425
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||  |||  |||||| |||| |||||||||  ||||||  |||| |||   ||||    
T  9797572 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatgtttta 9797473  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  9797472 tcatattatttgtaggca-ttttgtcgttgtatgctattaacttgggtg 9797425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 40487376 - 40487522
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||| ||| ||| |  ||||||||||| |||| || ||| |||| |||||||||  |||||||||||||||||  ||||    
T  40487376 tattgaaagatctacatcagtcaat-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggtttta 40487474  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| |||| |||| ||||||||||||||    
T  40487475 tcatattatttgtaggca-ttttgccgttatatgttattaacttgggtg 40487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 42460780 - 42460945
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||| ||| ||||||||||| || | ||| ||| ||||||||||||||||||| |||||| |||| | |||||||    |    
T  42460780 tgcggtgttcgtttggttcgtattcaaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaaca 42460878  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||  ||||| ||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  42460879 ttctggtgatttagattttatcatattatttgtaggca-ttttgttgttgtatgctattaacttgggt 42460945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 45568463 - 45568333
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    ||||||||| ||| || ||||||||||| |||| || ||| |||| |||||||||   ||||| ||||| ||||  ||||||| |||||||||||||| |    
T  45568463 tcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggca-t 45568365  T
Q  203 tttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||| |||||||||||||||||||||||||||    
T  45568364 tttgccgttgtatgctattaacttgggtgatg 45568333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 53099802 - 53099983
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | | || || ||||||| |||  ||||||||||||| | | |||||||||||  || ||||||||||||||||||| |||||  |    
T  53099802 tttgatttcacgtcttgtcgccgtattcatttagttcctattgaaagatcagcatgagtcaattacaagttcaatcaatgatttgggcgtcaacgttaca 53099901  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     || ||||||||| || ||| | |||||||||| |||| || |||||||||| ||| ||||||||||||||| |||||||||||    
T  53099902 tatccggaagcatgtgaattccagtgacttagattttagcatattatttgta-gca-ttttgtcgttgtatgttattaacttgg 53099983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 7448947 - 7448802
Alignment:
Q  88 aaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaa 187  Q
    ||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| | || |||||||||  ||||||||||||||||   || |||| |    
T  7448947 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcata 7448848  T
Q  188 ttatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||||||||| || ||||| || |||||||||||||||| |||||||    
T  7448847 ttatttgtagaca-ttttgccgctgtatgctattaacttaggtgatg 7448802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 7457089 - 7456944
Alignment:
Q  88 aaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaa 187  Q
    ||||||| || ||||||||||||| ||| || ||||||||||| |||| |||||| | || |||||||||  ||||||||||||||||   || |||| |    
T  7457089 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcata 7456990  T
Q  188 ttatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    |||||||||| || ||||| || |||||||||||||||| |||||||    
T  7456989 ttatttgtagaca-ttttgccgctgtatgctattaacttaggtgatg 7456944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 10229528 - 10229673
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||| ||   |||||| |||| |  ||||||   |||||||||||||||   ||||||    
T  10229528 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaagttttatc 10229627  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  10229628 atattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 10229673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 10233122 - 10233267
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||| | ||   |||||| |||| | ||| |||  ||||||||||||||||   ||||||    
T  10233122 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatc 10233221  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||| ||||| ||||||||||||||||||||||||    
T  10233222 atattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 10233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 19619784 - 19619904
Alignment:
Q  103 tcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatt 202  Q
    |||||||||  || |||||||||||| || ||| ||||||||||| || ||||||  | |||||||||||||||| ||||||| |||||||||||||| |    
T  19619784 tcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatccg-aagcatgagaatttcggtgacttagattttatcatattatttgtaggca-t 19619881  T
Q  203 tttgtcgttgtatgctattaact 225  Q
    |||| ||||||||||||||||||    
T  19619882 tttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 12050667 - 12050543
Alignment:
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
    |||||||||| ||| || |||||||||||| ||| |||||| |||| ||||| |||  ||||||||| |||||||  ||||||| |||||||||| |||     
T  12050667 gtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagca- 12050569  T
Q  202 ttttgtcgttgtatgctattaacttg 227  Q
    ||||||||||||||| ||||||||||    
T  12050568 ttttgtcgttgtatgttattaacttg 12050543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 7546645 - 7546812
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  |||||||||||||  ||||| |||| ||| ||| | ||||||||||| ||||| ||||||  ||| |  ||||||  |||    
T  7546645 tgcggtgttcgtttggttcgtattgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggta 7546744  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||||| ||||| || |||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  7546745 ttctggtgatttagatttcatcatattatttgtaggcatttt-gccgttgtatgctattaacttgggtg 7546812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 21289872 - 21289705
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||| ||| ||| |||||||||||| || ||| |||||| ||||   |||||||   ||    
T  21289872 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggata 21289773  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||  ||| | ||||| || |||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  21289772 ttctggtaatttagatttcatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 21289705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 45424848 - 45424968
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| ||| || || |||||||||| ||| ||||||||||||||||||| || ||| |||| ||||| |||  ||| ||||||||||| || ||||    
T  45424848 tattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgacttcgatttta 45424947  T
Q  183 tcaaattatttgtaggcattt 203  Q
    ||| |||||||||||||||||    
T  45424948 tcatattatttgtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 48650772 - 48650625
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||||  | ||| ||||||||| ||| || |||| |||||| |||| |||||| ||||  | ||| ||  ||||||||||||||||   ||||    
T  48650772 tattgaaagatctgcatcaatcaattacaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagtttta 48650673  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  48650672 tcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 48650625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 29922069 - 29922251
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | |||||||||  |||| |||  |||||||||||||||||||  |||| ||| ||| |||||||||||||| |||| |||||| |    
T  29922069 tttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgca 29922168  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| | ||| |||   | ||  ||||| ||||| ||||||| ||| |||||||||| ||||| |||||||||||||||||||||    
T  29922169 gatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggca-ttttgccgttgtatgctattaacttgg 29922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 29971222 - 29971404
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | |||||||||  |||| |||  |||||||||||||||||||  |||| ||| ||| |||||||||||||| |||| |||||| |    
T  29971222 tttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgca 29971321  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| | ||| |||   | ||  ||||| ||||| ||||||| ||| |||||||||| ||||| |||||||||||||||||||||    
T  29971322 gatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggca-ttttgccgttgtatgctattaacttgg 29971404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 43488711 - 43488481
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| |||| || |||||||| |||||||    ||| ||| ||||||||| |||| | ||||||||||  ||  |||| |||||||| |||  | |    
T  43488711 cgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtttgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgcat 43488612  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggc 199  Q
     | ||||||| | ||| || ||||||||||  |||| |||||| |||| |||||||||  |||||||||||| ||||  ||||||| ||||||| |||||    
T  43488611 taatcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggc 43488512  T
Q  200 atttttgtcgttgtatgctattaacttgggtg 231  Q
     |||||| |||||||||||||||| |||||||    
T  43488511 -tttttgccgttgtatgctattaatttgggtg 43488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 4711586 - 4711679
Alignment:
Q  137 acgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| |||| |||||||||  ||||||||||||||||   ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  4711586 acgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggca-ttttgccgttgtatgctattaacttgggtg 4711679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 231
Target Start/End: Original strand, 10108288 - 10108433
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatc 184  Q
    |||||||||| || ||||||||||||| ||| || ||||||||||  ||   |||||| |||| | || ||||  ||||||||| ||||||   ||||||    
T  10108288 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaagttttatc 10108387  T
Q  185 aaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    | |||||||||||||||||| | ||||||||||||||||||||||||    
T  10108388 atattatttgtaggcatttt-gccgttgtatgctattaacttgggtg 10108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 16235476 - 16235620
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||||||||| |  || || |||| ||| ||| ||||||||||||||||||| |||||| ||||   |||||||  |||||  ||||| ||||| || |    
T  16235476 tattgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttca 16235575  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| |||| ||||||||| |||||||||||||||||||||||||||    
T  16235576 tcatattacttgtaggca-ttttgtcgttgtatgctattaacttgg 16235620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 50194373 - 50194229
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||| || ||||||||||| ||||||| |||| ||||||||| |||  |||||| |||| |||||||||  |||||  ||||| |||||  | |    
T  50194373 tattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtattctggtgatttagatatca 50194274  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||| ||| |||||||||| ||||| |||| ||||||||||||||||    
T  50194273 tcatattttttgtaggca-ttttgccgttatatgctattaacttgg 50194229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 26275854 - 26275715
Alignment:
Q  86 tgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatca 185  Q
    ||||||||| || |||||||  |||| ||| |||||||||||| |  ||  |||||| ||||||| || |||  ||||||| |||||||| | |||||||    
T  26275854 tgaaagatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgcagattcgaaaacatgagtatttcagtgacttatattttatca 26275755  T
Q  186 aattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
     |||||||||||||| ||||||| |||||||||||||||||    
T  26275754 tattatttgtaggca-ttttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 12149822 - 12149676
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||  ||||| ||| || |||||||||||||||| |||||| ||||  ||||| ||  |||||||||||| |||   ||||    
T  12149822 tattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgtttta 12149723  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||| |||| | ||||||| ||||| |||||||||||||||| ||||||    
T  12149722 tcatattaatcgtaggca-ttttgccgttgtatgctattaagttgggt 12149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 45425643 - 45425762
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    ||||||||||| |  ||| ||||||||| ||| |||||||||||||||| || || ||| |||| ||||| |||  ||||||||||||||| || |||||    
T  45425643 attgaaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaacattgcagatccggaaccataagtatttcggtgacttcgattttat 45425742  T
Q  184 caaattatttgtaggcattt 203  Q
    || |||||||| ||||||||    
T  45425743 catattatttgcaggcattt 45425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 27706284 - 27706117
Alignment:
Q  64 tgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgta 162  Q
    |||||||||| |||||||  ||||||||||||| |||    |||| ||| ||| |||||||||||| |||||| |||||| | || |  ||||||  |||    
T  27706284 tgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggta 27706185  T
Q  163 tttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |   ||| | ||||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  27706184 tcctggttatttagatttcatcatattatttgtaggcatttt-gtcgttgtatgctattaacttgggtg 27706117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 227
Target Start/End: Original strand, 47896202 - 47896344
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||  || ||||||||||||| ||| || |||||||||||||||  | |||| | || |||||||||   ||||||| | ||||||  ||||    
T  47896202 tattgaaagatttacatcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttaggtttta 47896301  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||  |||||||||| ||| ||||||||||||||||||||||||||    
T  47896302 tcttattatttgta-gca-ttttgtcgttgtatgctattaacttg 47896344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 38860136 - 38860003
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtat--ttcggtgacttagaatttatcaaattatttgta 196  Q
    |||||| |||||| ||| || |||||| |||| |||| |||||| |||| || || |||  ||||  || ||||||||||  ||||||| ||||||||||    
T  38860136 tcagtcgattacaaattcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgta 38860037  T
Q  197 ggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||| ||||| ||||||||||||||||||||||||    
T  38860036 ggca-ttttgccgttgtatgctattaacttgggtg 38860003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 43016908 - 43016998
Alignment:
Q  86 tgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttag 176  Q
    ||||||||| || | ||||||||||| ||| || |||||||||||||||| |||||| |||| |||| |||| || |||||||||||||||    
T  43016908 tgaaagatcgacgttagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggatgcatgtgcatttcggtgacttag 43016998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 36461469 - 36461348
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||  ||||  ||||||||  ||||||||| || ||||  ||||    
T  36461469 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggtttta 36461370  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| ||||||||||| ||||||    
T  36461369 tcatattatttgtagccatttt 36461348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 44805046 - 44805225
Alignment:
Q  50 atttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagatt 148  Q
    |||||||||| | ||||||||||| ||||||   |||||||| |||| | ||||||||| ||| ||  ||||||| |||||| | || |||||| | ||     
T  44805046 atttcacgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac-tcaacgttgcaaatc 44805144  T
Q  149 cggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||  |||||  |||||  ||||| ||||| ||||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  44805145 cgagagcatgggtattatggtgatttagattttatcatattgtttgtaggcatttt-gtcattgtatgctattaacttgggt 44805225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 44959951 - 44959867
Alignment:
Q  143 tagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
    ||||||||||| |||  ||||||||||||||||   ||||||| |||||||||||||| ||||| | |||||||||||||||||||    
T  44959951 tagattcggaatcatgggtatttcggtgacttaagttttatcatattatttgtaggca-ttttgccattgtatgctattaacttgg 44959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 204
Target Start/End: Original strand, 53508255 - 53508397
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    |||| |||||| |||||||  |||||||||||||| | |||| ||| ||||||| |||||||||||||| |||| || ||| | || |  ||||||  ||    
T  53508255 ttgcagtgttcgtttggttcctattgaaagatcaaatccagttaatcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagt 53508354  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||| |  ||| ||||| ||||||| ||||||||||||||||||    
T  53508355 attacaatgatttagattttatcatattatttgtaggcatttt 53508397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 18011052 - 18011185
Alignment:
Q  66 cggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatt 164  Q
    |||||||| ||| |||| |||||||||||| |||| ||||||| |||  || ||||||| | ||||||||| |||||| |||| | |||||||   ||||    
T  18011052 cggtgttcgtttagtttctattgaaagatcgactttagtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatt 18011151  T
Q  165 tcggtgacttagaatttatcaaattatttgtagg 198  Q
    || ||||||||||  | |||| ||||||||||||    
T  18011152 tcagtgacttagatataatcatattatttgtagg 18011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 26716166 - 26716014
Alignment:
Q  63 ttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgt 161  Q
    ||||||||||| |||| ||| ||||||||||| | ||||||||||| | | ||| |||||||||||| |||||| |||||| |||| ||||| |||  ||    
T  26716166 ttgcggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgattttggcgtcaacgttgcagatccggaatcataggt 26716067  T
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtat 215  Q
    | |    ||| ||| | ||||||| |||||||||| |||||||| |||||||||    
T  26716066 actataatgatttatattttatcatattatttgtaagcattttt-tcgttgtat 26716014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 46220768 - 46220860
Alignment:
Q  138 cgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||| |||| || ||||||| ||||||| |||| ||||| ||||||| |||||||||||||| ||||  |||||||||| ||||| |||||||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtaggca-ttttaccgttgtatgccattaatttgggtg 46220860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 1649469 - 1649513
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatt 127  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  1649469 tattgaaagatcgacttcagacaattacagatttaatcaatgatt 1649513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 20608937 - 20608798
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||| |||||| | ||||| |||||  || ||||||||||||| || || | |||| |||| |||||||||  | |||||||||| ||||| ||||    
T  20608937 tattgaaatatcaacattagtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgatttagatttta 20608838  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    | | |||| ||| || |||||||  ||||||||||||||||    
T  20608837 ttatattacttgcagacattttt-ccgttgtatgctattaa 20608798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 20987714 - 20987643
Alignment:
Q  162 atttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||| || ||||||| ||||||| |||||||||||||| |||||  |||||||||||||||||||| |||||    
T  20987714 atttcagttacttagattttatcatattatttgtaggca-ttttgcagttgtatgctattaacttggatgatg 20987643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 32246459 - 32246547
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcg 133  Q
    ||||||| | |||| | ||||| |||||| ||||||  ||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  32246459 tttgattccgcgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttgggcg 32246547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 20987920 - 20987729
Alignment:
Q  1 cgtcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaactt 99  Q
    |||||||| | || |||||||||||||| ||||    ||||||||||||||||| |||| | | ||| ||||  ||| |||  |||||||||||| || |    
T  20987920 cgtcgtctaattgcggtgttgtgttcttagtcgtcttgtgtggcatttgatttcgcgtcttgtcgcgatgtttgtttagttcctattgaaagatcgacat 20987821  T
Q  100 cagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattat 191  Q
    | ||||||||||  ||  |||||||||||||| ||| |||||  ||||  ||||||||  | ||||| || ||||||| ||||||| |||||    
T  20987820 cggtcaattacaagttacatcaatgatttgggagtcaacgttacagatctggaagcataagaatttcagtaacttagattttatcatattat 20987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 27856299 - 27856365
Alignment:
Q  167 ggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
    ||||| ||||| ||||||| |||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  27856299 ggtgatttagattttatcatattatttgtaggcattttt-ccgttgcatgctattaacttggatgatg 27856365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 43017019 - 43017085
Alignment:
Q  164 ttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||||||||||   |||||| |||||||||||||| ||||| ||||||||||||||||||| ||||    
T  43017019 ttcggtgacttaggtgttatcatattatttgtaggca-ttttgccgttgtatgctattaacttaggtg 43017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 3085304 - 3085192
Alignment:
Q  118 atcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgc 217  Q
    ||||||||||||  |||| |||||| ||||||| ||| |   |||||  | ||| |||||||| |||| |||||||||||||| ||||| ||||||| ||    
T  3085304 atcaatgatttgaacgtcaacgttgcagattcgaaagtaggggtattctgatgatttagaattcatcatattatttgtaggca-ttttgccgttgtaggc 3085206  T
Q  218 tattaacttgggtg 231  Q
    |||||| |||||||    
T  3085205 tattaaattgggtg 3085192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 4821819 - 4822006
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||  |||| | ||||||||||| |||||||  ||||||||||||| ||| ||||||| ||| ||| |||| ||||||||| |  | |||||  |    
T  4821819 tttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttggacaccaacgttaca 4821918  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtgatg 234  Q
     || |||| ||||  |||||  ||||| ||| | || |||| ||| |||||||||| |||||  ||| ||||||||||||||||||||||    
T  4821919 aatccggaggcatgggtattctggtgattta-atttcatcatattttttgtaggca-ttttgctgttatatgctattaacttgggtgatg 4822006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 35865016 - 35864923
Alignment:
Q  38 gtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgg 130  Q
    ||||||| ||||||||  |||| ||| ||||||||| ||| |||  |||||||||||| || ||| ||||||||| ||| ||||||||||||||    
T  35865016 gtgtggcgtttgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgacatcaatcaattacaaattcaatcaatgatttgg 35864923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 36734678 - 36734568
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaat-tatttgtaggcatttttgtcgttgtat 215  Q
    |||||| |||||||||||| |||||| ||||  ||| ||||  |||||||||| ||||  | ||||||| || | |||||||||| || ||||||| |||    
T  36734678 aatcaaagatttgggcgtcaacgttgcagatctggaggcatgagtatttcggttactttaattttatcatatatttttgtaggca-ttatgtcgttatat 36734580  T
Q  216 gctattaacttg 227  Q
    ||||||||||||    
T  36734579 gctattaacttg 36734568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 25053291 - 25053345
Alignment:
Q  75 tttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgattt 128  Q
    |||||||| |||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  25053291 tttggtttatattaaaagatcgacttcaatcaattacagatttaatcaataattt 25053345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 26739305 - 26739252
Alignment:
Q  173 ttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||||| ||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  26739305 ttagattttatcatattatttgtaagcattttgg-cgttgtatgctattaacttg 26739252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 7887481 - 7887424
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgt 140  Q
    |||||||||||||||||||| |||| ||| |||  || ||||||||||||||| ||||    
T  7887481 tattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 12947350 - 12947265
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgg 130  Q
    ||||||||| | || | ||| ||||||| |||||||  |||||||| |||||||||||||||| | ||||| |||| |||||||||    
T  12947350 tttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtcaatcatagattcaatcgatgatttgg 12947265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 27066019 - 27066080
Alignment:
Q  98 ttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcattt 159  Q
    |||||| ||||||| ||| ||||||| ||||| ||||| || |||||||| |||||||||||    
T  27066019 ttcagttaattacaaattcaatcaattatttgagcgtcaacattgtagatccggaagcattt 27066080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 31310371 - 31310415
Alignment:
Q  85 ttgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    ||||||||||||||| | ||||||||||||| |||| ||||||||    
T  31310371 ttgaaagatcaactttaatcaattacagattcaatcgatgatttg 31310415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 15543 - 15690
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||||||||| ||| || ||||||||||| |||| || ||| |||| |||||||||   ||||||||||||||||  ||||    
T  15543 tattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggtttta 15642  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| ||||| |||| |||||||||||||||||||    
T  15643 tcatattatttgtaggca-ttttgccgttatatgctattaacttgggtg 15690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 227
Target Start/End: Complemental strand, 32785 - 32642
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| || ||||||||||| |||| |||||| ||||  ||||||||  |||||||||||||||||| ||||    
T  32785 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagatttta 32686  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    ||| |||||||||||||| |||||||| ||||| |||||||||||    
T  32685 tcatattatttgtaggca-ttttgtcgctgtatactattaacttg 32642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 227
Target Start/End: Complemental strand, 66079 - 65937
Alignment:
Q  84 attgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttat 183  Q
    |||| |||||| || ||||||||||||| ||| || |||||||||||| | | |||||| |||| |||||||||  ||||||||||||||||   |||||    
T  66079 attggaagatcgacatcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttat 65980  T
Q  184 caaattatttgtaggcatttttgtcgttgtatgctattaacttg 227  Q
    || |||||||||||||| ||||||||||||||||||||||||||    
T  65979 catattatttgtaggca-ttttgtcgttgtatgctattaacttg 65937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 1314 - 1539
Alignment:
Q  3 tcgtctgagtgaggtgttgtgttcttcgtcgatcagtgtggcatttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttca 101  Q
    |||||| |||| || |||||||| |||||||    ||||||| ||||||||| |||| | ||||||||||| ||| |||  ||||||||||||  | |||    
T  1314 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatca 1413  T
Q  102 gtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcat 201  Q
    |||||||||| |||  | |||| ||||||||||| |||||| || |   ||||||| || |||||||||| ||||  ||||||| ||||||||||||||     
T  1414 gtcaattacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggca- 1512  T
Q  202 ttttgtcgttgtatgctattaacttgg 228  Q
    ||||| |||| ||||||||||||||||    
T  1513 ttttgccgttttatgctattaacttgg 1539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 31312 - 31165
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||| ||||||||| ||| |||||| |||||| || || | |||| |||| |||||||||  |||||||||||||||||| ||||    
T  31312 tattgaaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttagatttta 31213  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| ||||||| |||||| |||||||||||  |||||||| ||||||||    
T  31212 tcatattatttataggca-ttttgtcgttgcttgctattagcttgggtg 31165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 71322 - 71191
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtagg 198  Q
    ||||||||||| | ||| ||||||||||| ||| ||| |||||| |||| |||||||||  |||||| | ||||||||| ||||| | ||||||||||||    
T  71322 tcagtcaattataaattcaatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtagg 71223  T
Q  199 catttttgtcgttgtatgctattaacttgggtg 231  Q
    || |||||| |||||||||||||||||||||||    
T  71222 ca-ttttgttgttgtatgctattaacttgggtg 71191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 50832 - 50974
Alignment:
Q  88 aaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaa 187  Q
    ||||||| || | ||||||||||| ||| || ||||||||||| |||| |||||| |||| |||||||||   |||||||||||||||   ||||||| |    
T  50832 aaagatctacgttagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcata 50931  T
Q  188 ttatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||    
T  50932 ttatttgtaggca-ttttgccattgtatgctattaacttgggtg 50974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 2011 - 1864
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || | ||||||||||| ||| || ||||| |||||||||| |||||| |||| || || |||  |||||||||||| ||||  ||||    
T  2011 tattgaaagatctacattagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttaggtttta 1912  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||| |||||  |||||||| ||||||||||||||    
T  1911 tcatattatttgtaggca-ttttgctgttgtatgttattaacttgggtg 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 6043 - 6202
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||  | |||||||||||||||||||  ||||||||  | ||||||||||||| ||| ||| ||||||||||||||  ||| | |||| |    
T  6043 tttgatttcgcgtattgttgcggtgttcatttggttcatattgaaatgttaacttcagtcaatcacatattcaatcaatgatttggatgtcaatgttgca 6142  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||| ||||||||| ||||||  ||||| ||||| ||||||| ||||||||||| ||||||    
T  6143 gatccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacatttt 6202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 58123 - 57982
Alignment:
Q  86 tgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatca 185  Q
    |||||||||| ||||||||||| ||||||| |||| ||||||||| |||| || ||| |||| |||||||||  |||||  ||||| ||||| || ||||    
T  58123 tgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatca 58024  T
Q  186 aattatttgtaggcatttttgtcgttgtatgctattaacttgg 228  Q
     ||| |||||||||| ||||| |||| ||||||||||||||||    
T  58023 tattttttgtaggca-ttttgccgttatatgctattaacttgg 57982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 92572 - 92392
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    |||||||||||||| | ||| ||||||| |||||||  |||||||||||||| || ||| ||| ||||||| |||||||||||||| |||| ||||||||    
T  92572 tttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgta 92473  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaactt 226  Q
    ||| | |||||||  |||||  |||   ||| | ||||||| ||| |||||||||| |||||| |||| || ||||||||||    
T  92472 gatccagaagcatgggtattctggtagtttaaattttatcatattgtttgtaggca-ttttgttgttgcatactattaactt 92392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 1716 - 1577
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||||||  || |||| |||||| | ||| |||  |||||  ||||| ||||| ||||    
T  1716 tattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtgatttagatttta 1617  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaa 223  Q
    ||| |||||||||||||| |||| ||||| |||||||||||    
T  1616 tcatattatttgtaggca-ttttatcgttatatgctattaa 1577  T

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Target: scaffold0136 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 38104 - 38253
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcgg---aagcatttgtatttcggtgacttagaat 179  Q
    |||||||||||  |||||||||||||||| ||| |||| |||||||||| ||| || |||| ||| |||   || |||  |||||||||||||||||| |    
T  38104 tattgaaagatagacttcagtcaattacaaattcaatcgatgatttgggtgtcaacattgttgatccggcggaaacatgggtatttcggtgacttagatt 38203  T
Q  180 ttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    |||||| |||||||||||| |||||   || | |||||||||||||||||||    
T  38204 ttatcatattatttgtagggatttt--gcgctatatgctattaacttgggtg 38253  T

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Target: scaffold0136; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 10118 - 9933
Alignment:
Q  46 tttgatttcacgtccttttgcggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgta 144  Q
    ||||||||| |||| | | |||||||||||||  ||  |||||||||||| || ||  ||||||||| ||| || |||||||||| | ||| |||||| |    
T  10118 tttgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgca 10019  T
Q  145 gattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| | ||| ||| |||||||| |||| || |  ||||||| |||||||||||||||||||  |||| ||||||||| |||||||||    
T  10018 gatccagaaacatgtgtatttcagtgaattgggttttatcatattatttgtaggcattttt-ccgttttatgctattgacttgggtg 9933  T

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Target: scaffold0262 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 1857 - 1736
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    ||||| |||||| || || || ||||||| ||| ||||||||||||||||  | |||||| |||| |||||||||  |||||||| ||||||| | ||||    
T  1857 tattggaagatcgacatcggtaaattacaaattcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatatttta 1758  T
Q  183 tcaaattatttgtaggcatttt 204  Q
    ||| ||||||||||||||||||    
T  1757 tcatattatttgtaggcatttt 1736  T

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Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 71902 - 71761
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || | ||||||||||| ||| || |||||||||||  ||| ||||||||||| |||||||||  ||      ||||||||   ||||    
T  71902 tattgaaagatctacattagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt------gtgacttaagtttta 71809  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  71808 tcatattatttgtaggcatttt-gccgttgtatgctattaacttgggtg 71761  T

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Target: scaffold0634 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 8563 - 8709
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| || ||||||  ||||| ||| || |||||||||||||||| |||||| ||||  ||||| ||  |||||||||||| |||   ||||    
T  8563 tattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgtttta 8662  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggt 230  Q
    ||| |||| | ||||||| ||||| |||||||||||||||| ||||||    
T  8663 tcatattaatcgtaggca-ttttgccgttgtatgctattaagttgggt 8709  T

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Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 7767 - 7913
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaattta 182  Q
    |||||||||||| |||||||||||||| | |||  |||||| ||||||| |||||||||| | || |||||||| | ||| |   |||| ||| ||||||    
T  7767 tattgaaagatccacttcagtcaattataaattccatcaattatttgggtgtcgacgttgcatatccggaagca-tggtaatgtagtgagttataattta 7865  T
Q  183 tcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
    ||| |||||||||||| | |||||   ||||||| ||||||||||||||    
T  7866 tcatattatttgtaggga-ttttgctattgtatgttattaacttgggtg 7913  T

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Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 36898 - 37021
Alignment:
Q  105 aattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttt 204  Q
    ||||||| ||| ||||||||||||||||||| | ||||   ||  ||||||||  ||||||| |||| ||||| ||||||| |||||||||||| | |||    
T  36898 aattacaaattcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtaggta-ttt 36996  T
Q  205 tgtcgttgtatgctattaacttggg 229  Q
    ||  ||| |||||||||||||||||    
T  36997 tgatgttttatgctattaacttggg 37021  T

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Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 93141 - 93305
Alignment:
Q  67 ggtgttcatttggttt-tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtattt 165  Q
    ||||||| |||||||  ||||||||||||   |||| ||||| ||| ||| ||||||||||| || |||| |||||| |||| | |||  ||  |||||     
T  93141 ggtgttcgtttggttcatattgaaagatcggtttcactcaatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattc 93240  T
Q  166 cggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatgctattaacttgggtg 231  Q
     ||||| ||| | ||||||| ||| |||||||||||||| || ||||| |||||||||||||||||    
T  93241 tggtgatttaaattttatcatattgtttgtaggcatttt-gttgttgtgtgctattaacttgggtg 93305  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 25357 - 25455
Alignment:
Q  99 tcagtcaattacagatttaatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtag 197  Q
    ||||| ||||||| ||| ||||||||||||| ||||| || |||||||| |  || |||  ||||||| |||||||||| || |||| |||||||||||    
T  25357 tcagttaattacaaattaaatcaatgatttgagcgtcaacattgtagatccaaaaacatgagtatttctgtgacttagatttgatcatattatttgtag 25455  T

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Target: scaffold0095 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 9421 - 9484
Alignment:
Q  67 ggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttg 129  Q
    ||||||| ||||||| || ||||||||||||||| ||||||||||| ||| |||||| ||||||    
T  9421 ggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 9484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 19112 - 19065
Alignment:
Q  83 tattgaaagatcaacttcagtcaattacagatttaatcaatgatttgg 130  Q
    ||||||||||| ||||||||||||| ||||| | ||||||||||||||    
T  19112 tattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttgg 19065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 14874 - 14762
Alignment:
Q  117 aatcaatgatttgggcgtcgacgttgtagattcggaagcatttgtatttcggtgacttagaatttatcaaattatttgtaggcatttttgtcgttgtatg 216  Q
    |||||||||||| ||  || || ||| |||| ||||| |||  |||||||| ||||||||| ||||||| |||||||||| |||||||  |  || ||||    
T  14874 aatcaatgatttaggaatcaacattgcagatccggaaacatgagtatttcgatgacttaga-tttatcatattatttgtatgcattttgcta-ttatatg 14777  T
Q  217 ctattaacttgggtg 231  Q
    |||||||||||||||    
T  14776 ctattaacttgggtg 14762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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