View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16651_high_16 (Length: 209)
Name: NF16651_high_16
Description: NF16651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16651_high_16 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 52761806 - 52761978
Alignment:
| Q |
19 |
acaatcatttgaaattgaggagtctcaacctttttaaatgcatacatagatgttataggtacctgtgaagcgtaggtctgttggaatgggcttttatctt |
118 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52761806 |
acaatcatttgaaattgaagagtctcaacctttttaaatgcatacatagatgttataggtacctgtgaagcgtaggtctgttggaatgggcttttatctt |
52761905 |
T |
|
| Q |
119 |
cattaagctgaagaattgatttaaacaagatttatcaatgtagtatataaataatgctaattcagatagatga |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52761906 |
cattaagctgaagaattgatttaaacaagatttatcaatgtagtatataaataatgctaattcagatagatga |
52761978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University