View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16651_high_6 (Length: 301)
Name: NF16651_high_6
Description: NF16651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16651_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 284
Target Start/End: Complemental strand, 4062071 - 4061796
Alignment:
| Q |
15 |
acaatgattactcaaaaataaaatacaataatgtgttacttaataggagaccttaagcactaatgagattctaaaaattgtgaggactttatgagtcata |
114 |
Q |
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| T |
4062071 |
acaatgattactcaaaaataaaatacaataatgtgttacttaataggagaccttaagcactaatgagattctaaaaatagcgaggactttatgagtcata |
4061972 |
T |
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| Q |
115 |
aactattcaagtttaatacaaa------acatagttgatcattagaagacaatgataactatgcaaaaaattcattggacaaaacattgagtggaaaacc |
208 |
Q |
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| T |
4061971 |
aactaatcaagtttaatacaaacgttgaacataattgatcattagaagacaatgataactacgcaaaaaattcattggacaaaacattgagtggaaaacc |
4061872 |
T |
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| Q |
209 |
aaagatgcaaaaaccatatcctatcgttagatttcatttccattacctaaattgcgaagtcataaatgtcattcat |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4061871 |
aaagatgcaaaaaccatatcctatcgttagatttcatttccattacctaaattgcaaagtcataaatgtcattcat |
4061796 |
T |
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