View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16652_high_20 (Length: 292)

Name: NF16652_high_20
Description: NF16652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16652_high_20
NF16652_high_20
[»] chr3 (30 HSPs)
chr3 (88-275)||(35070284-35070473)
chr3 (13-92)||(3353529-3353609)
chr3 (13-84)||(40848524-40848596)
chr3 (13-84)||(42673274-42673346)
chr3 (14-84)||(3353131-3353202)
chr3 (10-84)||(53687891-53687967)
chr3 (13-89)||(26007597-26007675)
chr3 (13-93)||(48159891-48159973)
chr3 (13-84)||(22429574-22429646)
chr3 (13-84)||(26007185-26007257)
chr3 (13-87)||(27238878-27238954)
chr3 (13-84)||(36180559-36180630)
chr3 (13-84)||(42672981-42673053)
chr3 (13-87)||(53766163-53766239)
chr3 (13-98)||(40848939-40849026)
chr3 (13-84)||(24485438-24485510)
chr3 (13-84)||(53688281-53688353)
chr3 (14-87)||(24485022-24485096)
chr3 (13-89)||(27238463-27238541)
chr3 (13-89)||(36180968-36181046)
chr3 (13-84)||(10348482-10348555)
chr3 (13-84)||(48160311-48160384)
chr3 (13-84)||(10348777-10348850)
chr3 (13-84)||(22429161-22429234)
chr3 (41-89)||(42455788-42455837)
chr3 (13-84)||(44007970-44008043)
chr3 (10-89)||(47665909-47665990)
chr3 (41-89)||(8315089-8315137)
chr3 (13-84)||(21896489-21896561)
chr3 (13-84)||(44008379-44008451)
[»] chr1 (44 HSPs)
chr1 (13-88)||(999111-999187)
chr1 (13-84)||(20480171-20480243)
chr1 (10-84)||(49317755-49317830)
chr1 (13-93)||(999503-999584)
chr1 (12-84)||(49318420-49318493)
chr1 (13-84)||(27172119-27172191)
chr1 (13-87)||(46823843-46823919)
chr1 (13-84)||(50615599-50615671)
chr1 (13-84)||(50623427-50623499)
chr1 (14-84)||(20480591-20480662)
chr1 (13-90)||(28633717-28633796)
chr1 (13-90)||(28634135-28634214)
chr1 (7-88)||(42611184-42611267)
chr1 (13-84)||(26814697-26814770)
chr1 (13-88)||(48104677-48104754)
chr1 (13-87)||(42611592-42611668)
chr1 (13-84)||(49318144-49318216)
chr1 (13-87)||(50430059-50430135)
chr1 (7-84)||(4692405-4692484)
chr1 (13-90)||(9347529-9347607)
chr1 (13-84)||(20371330-20371403)
chr1 (13-89)||(26815097-26815175)
chr1 (13-89)||(32163021-32163099)
chr1 (13-84)||(9347129-9347202)
chr1 (13-84)||(48105094-48105167)
chr1 (13-84)||(50526450-50526523)
chr1 (13-84)||(20371043-20371114)
chr1 (8-84)||(6703867-6703945)
chr1 (13-84)||(13918449-13918522)
chr1 (13-84)||(13918845-13918918)
chr1 (13-84)||(21687028-21687101)
chr1 (51-84)||(47498512-47498545)
chr1 (13-92)||(50949543-50949624)
chr1 (13-84)||(21687445-21687517)
chr1 (13-84)||(47498304-47498375)
chr1 (13-89)||(6703458-6703536)
chr1 (13-93)||(27172519-27172601)
chr1 (13-89)||(44911415-44911493)
chr1 (13-84)||(46824256-46824329)
chr1 (13-84)||(4692025-4692097)
chr1 (41-93)||(19007729-19007781)
chr1 (13-84)||(44224097-44224169)
chr1 (41-84)||(50615243-50615287)
chr1 (41-84)||(50623071-50623115)
[»] chr5 (29 HSPs)
chr5 (12-91)||(10098918-10098998)
chr5 (13-89)||(41072192-41072269)
chr5 (13-89)||(43464170-43464247)
chr5 (13-84)||(2817553-2817625)
chr5 (13-97)||(22728998-22729083)
chr5 (13-84)||(25940992-25941065)
chr5 (13-88)||(43463755-43463831)
chr5 (13-93)||(2817143-2817225)
chr5 (13-84)||(10098522-10098595)
chr5 (13-87)||(21207226-21207302)
chr5 (13-84)||(22729418-22729490)
chr5 (13-84)||(37610205-37610277)
chr5 (13-84)||(37780323-37780395)
chr5 (13-98)||(34147488-34147575)
chr5 (13-89)||(12498565-12498643)
chr5 (13-89)||(26570727-26570805)
chr5 (13-89)||(26571142-26571220)
chr5 (13-84)||(3888242-3888315)
chr5 (13-88)||(3888640-3888717)
chr5 (13-87)||(11316714-11316790)
chr5 (13-87)||(30401882-30401958)
chr5 (13-89)||(12498906-12498984)
chr5 (20-84)||(19514948-19515014)
chr5 (13-74)||(25940535-25940597)
chr5 (13-90)||(31569904-31569982)
chr5 (13-98)||(19514514-19514602)
chr5 (11-89)||(11351403-11351483)
chr5 (13-84)||(34147144-34147215)
chr5 (13-84)||(37610596-37610668)
[»] chr7 (29 HSPs)
chr7 (10-84)||(48359323-48359398)
chr7 (13-86)||(22740569-22740643)
chr7 (13-84)||(13744211-13744283)
chr7 (13-92)||(42419006-42419087)
chr7 (13-87)||(18863967-18864043)
chr7 (13-89)||(20418886-20418964)
chr7 (13-93)||(20419302-20419384)
chr7 (13-84)||(22740159-22740232)
chr7 (21-88)||(36527383-36527451)
chr7 (13-90)||(37889237-37889316)
chr7 (13-89)||(10533032-10533110)
chr7 (13-84)||(3205071-3205144)
chr7 (13-84)||(9035271-9035344)
chr7 (13-84)||(17156970-17157043)
chr7 (13-89)||(18864380-18864457)
chr7 (13-84)||(36527776-36527849)
chr7 (13-84)||(37888836-37888909)
chr7 (13-84)||(37972374-37972447)
chr7 (13-97)||(37971949-37972036)
chr7 (13-84)||(29292925-29292998)
chr7 (13-84)||(3204672-3204743)
chr7 (13-83)||(48359636-48359707)
chr7 (13-84)||(13741560-13741633)
chr7 (13-84)||(29293324-29293397)
chr7 (21-84)||(38826899-38826964)
chr7 (13-84)||(42418594-42418667)
chr7 (13-89)||(9034865-9034944)
chr7 (51-87)||(27096359-27096395)
chr7 (51-87)||(27181908-27181944)
[»] chr8 (14 HSPs)
chr8 (13-88)||(25439104-25439180)
chr8 (13-87)||(34498122-34498198)
chr8 (13-84)||(15444214-15444287)
chr8 (13-84)||(17431290-17431363)
chr8 (13-89)||(6199074-6199152)
chr8 (13-84)||(41662524-41662597)
chr8 (12-89)||(15444624-15444703)
chr8 (13-89)||(37396706-37396784)
chr8 (13-84)||(24473746-24473819)
chr8 (7-74)||(20861610-20861678)
chr8 (13-84)||(16169585-16169658)
chr8 (17-84)||(37397127-37397196)
chr8 (13-84)||(13936726-13936798)
chr8 (13-84)||(16169177-16169249)
[»] chr4 (29 HSPs)
chr4 (13-93)||(9380719-9380801)
chr4 (13-88)||(12757766-12757842)
chr4 (10-84)||(23540227-23540303)
chr4 (13-84)||(39912057-39912129)
chr4 (13-84)||(48405965-48406037)
chr4 (13-89)||(39744443-39744521)
chr4 (13-84)||(293195-293268)
chr4 (13-89)||(292780-292858)
chr4 (13-84)||(169417-169490)
chr4 (13-84)||(4239344-4239417)
chr4 (13-84)||(9023658-9023731)
chr4 (13-84)||(25161881-25161954)
chr4 (13-84)||(28196751-28196824)
chr4 (13-84)||(32703628-32703701)
chr4 (13-84)||(43292040-43292113)
chr4 (13-99)||(28196334-28196422)
chr4 (13-87)||(48406363-48406438)
chr4 (13-89)||(9023242-9023320)
chr4 (13-84)||(9380310-9380383)
chr4 (13-73)||(25162291-25162352)
chr4 (13-84)||(43292335-43292408)
chr4 (13-73)||(44468901-44468962)
chr4 (13-84)||(26207364-26207436)
chr4 (13-84)||(39912465-39912537)
chr4 (13-84)||(169016-169090)
chr4 (13-90)||(23539838-23539915)
chr4 (13-89)||(39744028-39744106)
chr4 (13-89)||(12758182-12758259)
chr4 (13-84)||(39086601-39086674)
[»] scaffold0460 (2 HSPs)
scaffold0460 (13-84)||(333-406)
scaffold0460 (13-84)||(741-813)
[»] chr6 (14 HSPs)
chr6 (13-87)||(32733974-32734050)
chr6 (13-84)||(22755067-22755140)
chr6 (13-84)||(2354412-2354484)
chr6 (13-80)||(13177034-13177102)
chr6 (7-74)||(32733571-32733639)
chr6 (20-84)||(7654533-7654599)
chr6 (13-84)||(10087836-10087909)
chr6 (13-93)||(29074350-29074431)
chr6 (13-93)||(29079114-29079195)
chr6 (13-93)||(29106923-29107004)
chr6 (13-84)||(33974277-33974350)
chr6 (35-88)||(31598729-31598782)
chr6 (13-84)||(22684336-22684408)
chr6 (13-84)||(22754660-22754732)
[»] chr2 (22 HSPs)
chr2 (13-84)||(18750104-18750176)
chr2 (13-93)||(7664242-7664324)
chr2 (13-88)||(5793446-5793523)
chr2 (13-84)||(7664651-7664724)
chr2 (13-88)||(8851147-8851224)
chr2 (13-84)||(8851560-8851633)
chr2 (13-88)||(26692395-26692472)
chr2 (13-96)||(26692798-26692883)
chr2 (13-87)||(19141827-19141901)
chr2 (13-87)||(41790491-41790566)
chr2 (13-80)||(6324924-6324993)
chr2 (13-84)||(37720207-37720280)
chr2 (13-84)||(16911247-16911319)
chr2 (13-84)||(6325325-6325398)
chr2 (13-84)||(16910830-16910903)
chr2 (13-84)||(38490819-38490891)
chr2 (14-84)||(7979982-7980053)
chr2 (21-87)||(18749726-18749793)
chr2 (13-81)||(7979573-7979641)
chr2 (13-84)||(17850981-17851053)
chr2 (13-65)||(17851380-17851433)
chr2 (10-84)||(19141447-19141522)
[»] scaffold0069 (2 HSPs)
scaffold0069 (13-84)||(50484-50557)
scaffold0069 (13-84)||(50078-50149)
[»] scaffold0017 (2 HSPs)
scaffold0017 (13-84)||(185252-185325)
scaffold0017 (13-84)||(184842-184915)
[»] scaffold0176 (2 HSPs)
scaffold0176 (13-84)||(19624-19696)
scaffold0176 (41-98)||(20050-20108)
[»] scaffold0029 (1 HSPs)
scaffold0029 (13-84)||(9908-9982)
[»] scaffold0001 (1 HSPs)
scaffold0001 (41-87)||(183364-183410)
[»] scaffold0041 (1 HSPs)
scaffold0041 (13-84)||(38673-38746)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 88 - 275
Target Start/End: Original strand, 35070284 - 35070473
Alignment:
Q  88 tattttaaattataagataagataaaatatttgcatgtgaacacgatatttgtgtgtgcatttgtcctccatat--ccccacaagcaaaaacctttttag 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35070284 tattttaaattataagataagataaaatatttgcatgtgaacacgatatttgtgtgtgcatttgtcctccatatatccccacaagcaaaaacctttttag 35070383  T
Q  186 ggggaaaatccccaatatatcttgtgttctcatatttgacaaatataataagaagaaattttaggcacccattatatttggttgggtgtt 275  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35070384 ggggaaaatccccaatatatcttgtgttctcctatttgacaaatataataagaagaaattttaggcacccattatatttggttgggtgtt 35070473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 3353529 - 3353609
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctattt 92  Q
    ||||||||||||||||||||||| | || ||||||| | ||||| |||||||||||||||||||||||| |||||||||||    
T  3353529 aaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaactaaacctattt 3353609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 40848596 - 40848524
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  |||||||||| | ||||| ||||||||||||||||||||||||||||    
T  40848596 aaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 40848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 42673274 - 42673346
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  42673274 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 42673346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 3353202 - 3353131
Alignment:
Q  14 aaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 3353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 53687967 - 53687891
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||| || || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  53687967 ggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 26007597 - 26007675
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaaccta 89  Q
    |||||||||||||||||| |||| | || ||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  26007597 aaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaaccta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 48159973 - 48159891
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaacctatttt 93  Q
    ||||||||||||||||||||||||  || ||||||| | ||||| |||||||||||||| |||||||||||||| ||||||||    
T  48159973 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctatttt 48159891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 22429574 - 22429646
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||| || |||||||||||||    
T  22429574 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26007257 - 26007185
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | |||||||||||||||||||| ||| |||||||||    
T  26007257 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaa 26007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 27238878 - 27238954
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  27238878 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 27238954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 36180630 - 36180559
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||||||||||||| ||||||| ||||||||||    
T  36180630 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata-ggggaaatgtgcaattaa 36180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 42673053 - 42672981
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||| ||||||||||||||||  || ||||||| | ||||| ||||||||||||||||||||||||||||    
T  42673053 aaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 42672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 53766239 - 53766163
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||||| || |||||||||||||||||    
T  53766239 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaacc 53766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 40848939 - 40849026
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaacctattttaaatt 98  Q
    ||||||||| ||||||||||||||  || ||||||| | ||||| |||||||||| |||||||||||||||||| |||||||| ||||    
T  40848939 aaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcctatttttaatt 40849026  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 24485438 - 24485510
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||| |||||||||||||  || ||||||| | ||||| |||||||||||| |||||||||||||||    
T  24485438 aaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaa 24485510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 53688281 - 53688353
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||| |||||||||| || ||||||| | ||||| |||||||||||||  |||||||||||||    
T  53688281 aaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaa 53688353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 24485096 - 24485022
Alignment:
Q  14 aaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||||  || ||||||| | ||||| ||||||||||| |||||| || |||||||||    
T  24485096 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaatgtaattaaacc 24485022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 27238541 - 27238463
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||||| ||||||||| ||||||| ||||    
T  27238541 aaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 36180968 - 36181046
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || |  ||||||| | |||| ||||||||||||| |||||||||||||||| ||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10348555 - 10348482
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||| ||| ||||| ||||| | | ||||||||||||||| ||| |||||||||||||||    
T  10348555 aaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaa 10348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 48160311 - 48160384
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||| |||||||||||||    
T  48160311 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 10348777 - 10348850
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| | || ||||||||||||||    
T  10348777 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 22429234 - 22429161
Alignment:
Q  13 aaaatcgctcgtttaaaacta-tggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaa 84  Q
    ||||||||||||||||||||| ||| || ||| ||| | ||||| |||| |||||||| |||||||||||||||    
T  22429234 aaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 42455837 - 42455788
Alignment:
Q  41 aaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaaccta 89  Q
    ||||||| | |||||||||||||||| |||||||||||||||||| ||||    
T  42455837 aaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 44008043 - 44007970
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||  |||| ||| | | | |||||| ||||||||||| ||||||||||||||||    
T  44008043 aaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 44007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 47665990 - 47665909
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaaaccta 89  Q
    ||||||||| ||||||| |||| ||| | || ||||||| | |||||||||||||| ||||| |||||||||||||| ||||    
T  47665990 ggtaaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 8315089 - 8315137
Alignment:
Q  41 aaaatcgtataattgacaaactatagggggaaaagtgcaattaaaccta 89  Q
    ||||||| | |||||||||| ||||||||| ||||||||||||| ||||    
T  8315089 aaaatcgcacaattgacaaaatataggggggaaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 21896489 - 21896561
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||| |||||| || || || ||||||| | |||||||||| |||||||| |||| |||||||||    
T  21896489 aaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaa 21896561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 44008379 - 44008451
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| ||||||||||||||||| | || ||||| | | ||||| |||||||||||  |||||||||||||||    
T  44008379 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaa 44008451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 999187 - 999111
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  999187 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaaacct 999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 20480243 - 20480171
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  20480243 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 20480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 49317830 - 49317755
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||||| ||| ||||| | | ||||| ||||||||||||||||||||||||||||    
T  49317830 ggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 49317755  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 999503 - 999584
Alignment:
Q  13 aaaatcgctcgtttaaaactatggat-gtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||||||||||||| | | ||||||| | ||||| ||| |||||||||||||||||||||||| ||||||||    
T  999503 aaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcctatttt 999584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 49318420 - 49318493
Alignment:
Q  12 taaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||| ||| ||||||| | |||||| ||||||||||||||||| |||||||||    
T  49318420 taaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaa 49318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 27172191 - 27172119
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||| ||||||||||||||||||||||||||||    
T  27172191 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 27172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 46823919 - 46823843
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacc 87  Q
    ||||||||||||||||||||||||| || ||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  46823919 aaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 46823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 50615599 - 50615671
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||| |||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  50615599 aaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 50615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 50623427 - 50623499
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||| |||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  50623427 aaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 50623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 20480591 - 20480662
Alignment:
Q  14 aaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||| || || ||||||| | ||||| ||||||||||||||||||||||||||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 20480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 28633796 - 28633717
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaaacctat 90  Q
    |||||||||||||||||||||| || || ||||||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  28633796 aaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcctat 28633717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 28634135 - 28634214
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaaacctat 90  Q
    ||||||| ||||||||||||||||  || ||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  28634135 aaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctat 28634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 42611267 - 42611184
Alignment:
Q  7 ggaggtaaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaaacct 88  Q
    ||||| ||||||||||||||||||||||| | || ||||||| | ||||| |||||||| ||||||||||||||||||||||||    
T  42611267 ggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaaacct 42611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26814770 - 26814697
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | |||||||||||||||||| ||||||||||||||||    
T  26814770 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 48104754 - 48104677
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  48104754 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaaacct 48104677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 42611592 - 42611668
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaaacc 87  Q
    ||||||||| ||||||||||||| | || ||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  42611592 aaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaaacc 42611668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 49318144 - 49318216
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||| ||||||||| ||| ||||||| | ||||| |||||||||||||| |||||||||||||    
T  49318144 aaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaa 49318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 50430059 - 50430135
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  50430059 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 50430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 4692405 - 4692484
Alignment:
Q  7 ggaggtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    |||||||||||||||||||||||||||| || || ||||| | | ||||| |||||||||||||| ||||||||||||||    
T  4692405 ggaggtaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaa 4692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 9347529 - 9347607
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctat 90  Q
    ||||||||||||||||||||||||  || ||||| | | ||||| |||||||||||||| ||||||||||||| |||||    
T  9347529 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagcctat 9347607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 20371330 - 20371403
Alignment:
Q  13 aaaatcgctcgtttaaaactatggatgt--aaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| ||||||||||||||||||  ||  ||||||| | ||||| ||||||||||||||||||||||||||||    
T  20371330 aaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 20371403  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 26815097 - 26815175
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | |||||| |||||||| ||||||||||||||||||| ||||    
T  26815097 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 32163021 - 32163099
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||    
T  32163021 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 9347202 - 9347129
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  9347202 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 48105094 - 48105167
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||| ||||||||||||||||||||    
T  48105094 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 50526450 - 50526523
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||||||| ||||||||||||||    
T  50526450 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 20371114 - 20371043
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||| | | |||||||||||||||||||| |||||||||||||    
T  20371114 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaa 20371043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 6703867 - 6703945
Alignment:
Q  8 gaggtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaa 84  Q
    |||| |||||||||||||||||||||| || || ||||| | | ||||| ||||||||||||| |||||||||||||||    
T  6703867 gaggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaa 6703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 13918522 - 13918449
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||||| || ||||||||||||||    
T  13918522 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 13918845 - 13918918
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    ||||||| ||||||||||||||| | || ||||||| | ||||| |||||||||||| ||||||||||||||||    
T  13918845 aaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 21687101 - 21687028
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || |||||   | |||||||||||||||| ||||||||||||||||||    
T  21687101 aaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 47498512 - 47498545
Alignment:
Q  51 aattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||||||||||||    
T  47498512 aattgacaaactatagggggaaaagtgcaattaa 47498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 50949543 - 50949624
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctattt 92  Q
    |||||||||||||| |||| ||| |||| ||||||| | ||||||||||||||| ||||| ||||||||||||  |||||||    
T  50949543 aaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgcctattt 50949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 21687445 - 21687517
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||| | |  ||||||| | ||||| |||| ||||||||||||||||| |||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggggaaaagtgctattaa 21687517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 47498375 - 47498304
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||| |||||||||||| ||||| ||||| | | ||||| |||||||||||||| |||||||||||||    
T  47498375 aaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactataggggg-aaagtgcaattaa 47498304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 6703536 - 6703458
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||| | || ||||||| | |||||  |||||||||| || |||||||||||||| ||||    
T  6703536 aaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 27172519 - 27172601
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctatttt 93  Q
    ||||||||||||||||||| || ||||| ||||||| | ||||| |||| || | ||||||||||||||||||| ||| ||||    
T  27172519 aaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcctttttt 27172601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 44911415 - 44911493
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaaccta 89  Q
    |||||||||||||| |||| || || || ||||||| | ||||| |||||||||||||| |||| ||||||||||||||    
T  44911415 aaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 46824256 - 46824329
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||| | | ||||| ||||||||||| || ||||||||||||||    
T  46824256 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaa 46824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 4692097 - 4692025
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| |||||||| ||||||| ||||| ||||||||| ||||  |||||||||| ||  |||||||||||||    
T  4692097 aaaatggctcgttttaaactataggatgcaaaatcgtacaattagcaaactatagaggagaaagtgcaattaa 4692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 19007781 - 19007729
Alignment:
Q  41 aaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatttt 93  Q
    ||||||| | ||||| |||||||||||||| ||||||||||||| ||| ||||    
T  19007781 aaaatcgcacaattggcaaactataggggggaaagtgcaattaagcctttttt 19007729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 44224097 - 44224169
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||  | |||||  |||||| | |||| |||||||||||||    
T  44224097 aaaatcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatggggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 50615287 - 50615243
Alignment:
Q  41 aaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||    
T  50615287 aaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 50623115 - 50623071
Alignment:
Q  41 aaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||    
T  50623115 aaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 10098918 - 10098998
Alignment:
Q  12 taaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatt 91  Q
    |||||||||||||||||||||||||  || ||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  10098918 taaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaaacctatt 10098998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 41072192 - 41072269
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  41072192 aaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggaggaaaagtgtaattaaaccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 43464170 - 43464247
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||| | || ||||||| | |||||||||||||||||||||||||||||||||| ||||    
T  43464170 aaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 2817553 - 2817625
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  2817553 aaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagggggaaaagtgcaattaa 2817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 22729083 - 22728998
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctattttaaat 97  Q
    ||||||||||||||||||||||| | || ||||||| | |||| ||||||||||||||||||||||||||||| || | |||||||    
T  22729083 aaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagccaactttaaat 22728998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 25940992 - 25941065
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||| |||||||||||||||||    
T  25940992 aaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaa 25941065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 43463831 - 43463755
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    ||||||||||||||||||||||||  || ||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  43463831 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaaacct 43463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 2817225 - 2817143
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||||||| ||||| ||| ||||||| | ||||| |||||||||||| |||||||||||||||||||| ||||    
T  2817225 aaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacctttttt 2817143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10098595 - 10098522
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||| || ||||||||||||||    
T  10098595 aaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 10098522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 21207302 - 21207226
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  21207302 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 21207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 22729418 - 22729490
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||| |||| |||||||||||||||||||||||    
T  22729418 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 37610277 - 37610205
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||  | ||||| ||||||||||||||||||||||||||||    
T  37610277 aaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaa 37610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 37780395 - 37780323
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||  | ||||| ||||||||||||||||||||||||||||    
T  37780395 aaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 34147488 - 34147575
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaacctattttaaatt 98  Q
    ||||||||||||||||||||| | | || ||||||| | |||||||||||||||||||| |||||||||||||| ||| || ||||||    
T  34147488 aaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttttataaatt 34147575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 12498643 - 12498565
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||    
T  12498643 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 26570805 - 26570727
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| |||||||||||| |||||| ||||    
T  26570805 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 26571142 - 26571220
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||    
T  26571142 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 3888315 - 3888242
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||||| ||||| ||||||||| |||||||| ||||||||||    
T  3888315 aaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaa 3888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 3888640 - 3888717
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||| || || ||||||||| ||||| |||| ||| || |||||||||||||||||||||    
T  3888640 aaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaaacct 3888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 11316790 - 11316714
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaaacc 87  Q
    ||||| |||||||||||| ||| ||||| ||||| ||| ||||| ||||||||||| ||||||||||||||||||||    
T  11316790 aaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaaacc 11316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 30401958 - 30401882
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaacc 87  Q
    ||||||||| |||||||||||| ||||| ||||| ||| ||||| |||||||||| | |||||||||||||||||||    
T  30401958 aaaatcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaaacc 30401882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 12498906 - 12498984
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    ||||||||| |||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||    
T  12498906 aaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 19514948 - 19515014
Alignment:
Q  20 ctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||  || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  19514948 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 25940597 - 25940535
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaa 74  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||||||| ||||    
T  25940597 aaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaa 25940535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 31569982 - 31569904
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctat 90  Q
    |||||| |||||||||||  ||| | || ||||||| | ||||||||||  ||||||||||||||||||||||||||||    
T  31569982 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaaacctat 31569904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 19514602 - 19514514
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata--gggggaaaagtgcaattaaacctattttaaatt 98  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||  ||||| ||||||||||||| ||  |||||||||    
T  19514602 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagccatttttaaatt 19514514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 11351403 - 11351483
Alignment:
Q  11 gtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagg-gggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||| ||| || || ||||||| | ||||| ||||  ||||| | ||||||||||||||||||||    
T  11351403 gtaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 34147215 - 34147144
Alignment:
Q  13 aaaatcgctcgtttaaaacta-tggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||  || || ||||||| | |||||| ||||||||  |||||||||||||||||    
T  34147215 aaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactata-agggaaaagtgcaattaa 34147144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37610596 - 37610668
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||| ||| | || ||||||| | ||||  |||||||||||||| ||||| |||||||    
T  37610596 aaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaa 37610668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 48359398 - 48359323
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  48359398 ggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 48359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 22740569 - 22740643
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaac 86  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||||    
T  22740569 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaaac 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 13744211 - 13744283
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||||||||||||||||    
T  13744211 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 13744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 42419006 - 42419087
Alignment:
Q  13 aaaatcgctcgtttaaaactatggatgt--aaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctattt 92  Q
    ||||||||||||||||||||||||  ||  |||| || | ||||| ||||||||||||||||||||||||||||||||||||    
T  42419006 aaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaaacctattt 42419087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 18864043 - 18863967
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  18864043 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 18863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 20418964 - 20418886
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||||  || ||||||| | ||||| |||||||||||||| |||||||||||||||||||    
T  20418964 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 20419302 - 20419384
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  20419302 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctttttt 20419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 22740232 - 22740159
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  22740232 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 36527451 - 36527383
Alignment:
Q  21 tcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    ||||||||||||||||  || ||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaacct 36527383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 37889237 - 37889316
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctat 90  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| |||||    
T  37889237 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctat 37889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 10533110 - 10533032
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||    
T  10533110 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 3205071 - 3205144
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||| ||  || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  3205071 aaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 9035271 - 9035344
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  9035271 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 17157043 - 17156970
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    |||||||||| |||||||||||||  || ||||||| | |||||||||||||||| ||||||||||||||||||    
T  17157043 aaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 18864380 - 18864457
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaaccta 89  Q
    |||||||||| |||||||||||| | || ||||||| | ||||| |||||||||||||||||||| ||||||| ||||    
T  18864380 aaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 36527776 - 36527849
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||| | ||||||| |||||||||    
T  36527776 aaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaa 36527849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 37888909 - 37888836
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  37888909 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 37972374 - 37972447
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  37972374 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 37972036 - 37971949
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaaacct-attttaaat 97  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||| ||||| ||||||||||||||| ||| |||||||||    
T  37972036 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcctaattttaaat 37971949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 29292998 - 29292925
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    |||||||||||||| |||| |||| ||| ||||||| | ||||| |||||||||| ||||||||||||||||||    
T  29292998 aaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T

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Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 3204743 - 3204672
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| ||||||||||||||||||  || ||||||| | ||||| |||||||||||||| |||||||||||||    
T  3204743 aaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaa 3204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 48359636 - 48359707
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaatta 83  Q
    |||||||||||||| |||||||| | || ||||||| | |||||  |||||||||||| |||||||||||||    
T  48359636 aaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactataggggaaaaagtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 13741633 - 13741560
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | |||||  |||||||| ||||||||| |||||||||    
T  13741633 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 29293324 - 29293397
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||| |||| ||||| || ||||||| | ||||| ||||||||| ||||||||| |||||||||    
T  29293324 aaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 38826899 - 38826964
Alignment:
Q  21 tcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||| | || ||||||| | ||||||||||||||| ||||||||| |||||||||    
T  38826899 tcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 42418667 - 42418594
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||  ||||||| | ||||  ||||||||| |||||||||||| ||||||    
T  42418667 aaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaa 42418594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 9034944 - 9034865
Alignment:
Q  13 aaaatcgctcgtttaaaactat--ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||  || || | ||||| | ||||| |||| |||| ||||||||||||||||||| ||||    
T  9034944 aaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27096359 - 27096395
Alignment:
Q  51 aattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  27096359 aattgacaaaagatagggggaaaagtgcaattaaacc 27096395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 27181944 - 27181908
Alignment:
Q  51 aattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  27181944 aattgacaaaagatagggggaaaagtgcaattaaacc 27181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 25439104 - 25439180
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  25439104 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaacct 25439180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 34498198 - 34498122
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaacc 87  Q
    ||||||||||||||||||||||||  || ||||||| | |||||||||||||||||||| |||||||||||||||||    
T  34498198 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaacc 34498122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 15444287 - 15444214
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||| |||||||| |||||||||    
T  15444287 aaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaa 15444214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 17431363 - 17431290
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||| | || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  17431363 aaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 6199074 - 6199152
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| ||||||||||||  ||||||||||||||| ||||    
T  6199074 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 41662597 - 41662524
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||| | || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  41662597 aaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 41662524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 15444624 - 15444703
Alignment:
Q  12 taaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||| || || ||||||| | |||||  ||| ||||||||| |||||||||||||||||||    
T  15444624 taaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 37396784 - 37396706
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||| | ||||||||| ||||||||||||||||||| ||||    
T  37396784 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 24473746 - 24473819
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||||||  |||||||||||||||    
T  24473746 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 20861610 - 20861678
Alignment:
Q  7 ggaggtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaa 74  Q
    ||||| |||||||||||||||||||||| || || ||||||| | ||||| || |||||||||||||||    
T  20861610 ggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaa 20861678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16169585 - 16169658
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||  |||| ||| | | | |||||| ||||||||||| ||||||||||||||||    
T  16169585 aaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 16169658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 37397127 - 37397196
Alignment:
Q  17 tcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||| ||  | ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  37397127 tcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 13936798 - 13936726
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||| |||||  || ||||||| | |||||  |||  ||||||||||||||||||||||    
T  13936798 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaa 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 16169249 - 16169177
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| ||||||||||||||||| | || ||||| | | ||||| |||||||||||  |||||||||||||||    
T  16169249 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaa 16169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 9380719 - 9380801
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctatttt 93  Q
    ||||||||||||||||||||||||| || ||||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||    
T  9380719 aaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctatttt 9380801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 12757842 - 12757766
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    ||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||  |||||||| |||||||||||    
T  12757842 aaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatagaaggaaaagtacaattaaacct 12757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 23540227 - 23540303
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||| || || ||||||| | ||||||||||||||||||| |||||||||||||||    
T  23540227 ggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 39912129 - 39912057
Alignment:
Q  13 aaaatcgctcgtttaaaactatggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    ||||||| ||||||||||||||||||||||||||| | |||| | ||||||||||| ||||||||||||||||    
T  39912129 aaaatcgttcgtttaaaactatggatgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaa 39912057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 48406037 - 48405965
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||| | ||||||| ||||||||||||||||||||||||||||    
T  48406037 aaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaa 48405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 39744443 - 39744521
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| ||||||||||||||||||| ||||    
T  39744443 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 293195 - 293268
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | |||||||||||||||||||| ||||||||||||||    
T  293195 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 292858 - 292780
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaaccta 89  Q
    ||||||||||||||||||||||| |||| ||||| | | ||||| ||||||||| ||||||||||||||||||| ||||    
T  292858 aaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 169417 - 169490
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| ||||||||| |||||||||    
T  169417 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 4239344 - 4239417
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||||||| ||||||||||||||    
T  4239344 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 9023658 - 9023731
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||| |||||||||||||  || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  9023658 aaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 25161954 - 25161881
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  25161954 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 28196751 - 28196824
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  28196751 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 28196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 32703628 - 32703701
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  32703628 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32703701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 43292113 - 43292040
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | |||||||||||||||||||  ||||||||||||||    
T  43292113 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 28196422 - 28196334
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctattttaaatta 99  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||| |||| ||||||||||||||||||| |||| ||| |||||    
T  28196422 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcctaatttcaatta 28196334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 48406363 - 48406438
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||| ||||||||| ||||| ||||||||||    
T  48406363 aaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaagtacaattaaacc 48406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 9023320 - 9023242
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg-gaaaagtgcaattaaaccta 89  Q
    |||||| ||||||||||||||| || || ||||||| | ||||| ||||||||||||| ||||||||||||||| ||||    
T  9023320 aaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 9380383 - 9380310
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||  | ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  9380383 aaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 25162291 - 25162352
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaa 73  Q
    ||||||||||||||||||||||||| || ||||||  | |||||||||| ||||||||||||    
T  25162291 aaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagggggaaa 25162352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 43292335 - 43292408
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| ||||||| | ||||||||| |||||||||    
T  43292335 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaa 43292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 44468901 - 44468962
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaa 73  Q
    ||||||||||||||||||||||| | || ||||||| | ||||| |||||||||||||||||    
T  44468901 aaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaa 44468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 26207436 - 26207364
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||| |||| ||||  || ||||||| | ||||| |||||||||||||| |||||||||||||    
T  26207436 aaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 39912465 - 39912537
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||| ||||||||||||||| ||||| ||||||| | |||||| |||||||||  ||||||||| ||||||    
T  39912465 aaaatcactcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagaaggaaaagtgtaattaa 39912537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 169090 - 169016
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggg--gaaaagtgcaattaa 84  Q
    |||||||||||||||||| ||| || || ||||||| | ||||| |||||||||||||  |||||||||||||||    
T  169090 aaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaa 169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 23539915 - 23539838
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctat 90  Q
    ||||||| |||||| |||||||||  || ||||||| | ||||| |||||||||||||| ||||||||||||| |||||    
T  23539915 aaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcctat 23539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 39744106 - 39744028
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaaccta 89  Q
    |||||||||||||||||| ||| || || ||||||| | |||||  ||||||||||||| |||||||||||||| ||||    
T  39744106 aaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 12758182 - 12758259
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaaccta 89  Q
    ||||| ||||||||||||||||||  || |||| |  ||||||| |||||||||||   |||||||||||||||||||    
T  12758182 aaaattgctcgtttaaaactatggcgtgcaaaaacacataattggcaaactataggaaaaaaagtgcaattaaaccta 12758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 39086601 - 39086674
Alignment:
Q  13 aaaatcgctcgtttaaaacta-tggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||| | | || ||||||| | ||||| ||||||||| ||| |||||||||||||||    
T  39086601 aaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 406 - 333
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||||| ||| ||||||| | |||||||||||||||| ||||||||||||||||||    
T  406 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 741 - 813
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||| |||||  || ||||||| | ||||| ||||||||||||| ||||||||||||||    
T  741 aaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaa 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 32733974 - 32734050
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaaacc 87  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| |||||||||||| |||||||||||||||||||    
T  32733974 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacc 32734050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 22755067 - 22755140
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactat-agggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||| | || ||||||| |||||||||||||||| | ||||||||||||||||||    
T  22755067 aaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaa 22755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 2354484 - 2354412
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||| |||| |||| ||| ||||||||| |||||| ||||||||||||||||| |||||||||    
T  2354484 aaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggggaaaaatgcaattaa 2354412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 13177034 - 13177102
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaa 80  Q
    ||||||||||||||||||||||| | |||||||||  | |||||||| |||||||||||||||||||||    
T  13177034 aaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggggaaaagtgcaa 13177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 32733639 - 32733571
Alignment:
Q  7 ggaggtaaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaa 74  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||| |||||||    
T  32733639 ggaggcaaaattgctcgtttaaaactatgggatgcaaaatcgtataattggcaaactatagagggaaaa 32733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 7654533 - 7654599
Alignment:
Q  20 ctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||  || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  7654533 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 10087836 - 10087909
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||| | |||||||||||||||||||    
T  10087836 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 29074350 - 29074431
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||| |||||||||  || ||||||| | ||||| |||||||||||||| |||| |||||||| ||| ||||    
T  29074350 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttttt 29074431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 29079114 - 29079195
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||| |||||||||  || ||||||| | ||||| |||||||||||||| |||| |||||||| ||| ||||    
T  29079114 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttttt 29079195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 29106923 - 29107004
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacctatttt 93  Q
    |||||||||||||| |||||||||  || ||||||| | ||||| |||||||||||||| |||| |||||||| ||| ||||    
T  29106923 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcctttttt 29107004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 33974277 - 33974350
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| ||||||||| |||||||||    
T  33974277 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 31598729 - 31598782
Alignment:
Q  35 ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacct 88  Q
    ||||| ||||||| | |||| |||||  ||||||||||||||||||||||||||    
T  31598729 ggatgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaaacct 31598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 22684336 - 22684408
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||| | ||||||||||||||  || ||||||  | ||||| ||||||||| ||||||||||||||||||    
T  22684336 aaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaa 22684408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 22754732 - 22754660
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||| | ||||||||||||||  || ||||||  | ||||| ||||||||| ||||||||||||||||||    
T  22754732 aaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaa 22754660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 18750104 - 18750176
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||||||  || ||||||| | ||||||||||||||||||||| ||||||||||||    
T  18750104 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaa 18750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 7664324 - 7664242
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaaacctatttt 93  Q
    ||||||||||||||||||||||||  || ||||||| | |||||| ||||||||||||| |||||||||||||| ||||||||    
T  7664324 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcctatttt 7664242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 5793523 - 5793446
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| ||||||| | |||||||||||||||||||||||    
T  5793523 aaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaaacct 5793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 7664651 - 7664724
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | |||||||||||||||||| ||||||||||||||||    
T  7664651 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T

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Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 8851224 - 8851147
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||||||    
T  8851224 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacct 8851147  T

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Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 8851560 - 8851633
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||||||||||||| |||||||||||||||||||    
T  8851560 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 8851633  T

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Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 26692472 - 26692395
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaacct 88  Q
    |||||||||||||||||||||| || || ||||||| | |||||||||||||||| ||| ||||||||||||||||||    
T  26692472 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacct 26692395  T

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Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 26692798 - 26692883
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaaacctattttaaa 96  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  26692798 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaatttaaa 26692883  T

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Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19141827 - 19141901
Alignment:
Q  13 aaaatcgctcgtttaaaactatgg-atgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    |||||||||||||| ||||||||| ||| ||||||| | ||||| |||||||||||||| ||||||||||||||||    
T  19141827 aaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaaacc 19141901  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 41790566 - 41790491
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    |||||||||||||| |||| ||||  || ||||||| | |||||||||||||||||||||||| ||||||||||||    
T  41790566 aaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaaacc 41790491  T

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Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 6324993 - 6324924
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaa 80  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||| ||||||||| |||||||||||||||    
T  6324993 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 37720280 - 37720207
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  37720280 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37720207  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16911247 - 16911319
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||||||  |||||||||||||    
T  16911247 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaa 16911319  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 6325325 - 6325398
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||| |||||| | || ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  6325325 aaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 16910903 - 16910830
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata-gggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||| | |||||||||||||||||||    
T  16910903 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaa 16910830  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 38490819 - 38490891
Alignment:
Q  13 aaaatcgctcgtttaaaactatg-gatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||| ||| |||| ||||||| | |||||  ||||||||||| | |||||||||||||    
T  38490819 aaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggaggaaagtgcaattaa 38490891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 7979982 - 7980053
Alignment:
Q  14 aaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||||||||||||||||||| || || ||||||| | ||||  |||||||||| || ||||||||||||||    
T  7979982 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaa 7980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 18749793 - 18749726
Alignment:
Q  21 tcgtttaaaactatgga-tgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    ||||||||||||||||  || ||||||  ||||||||||||||| ||| | |||||||||||||||||    
T  18749793 tcgtttaaaactatggggtgcaaaatcacataattgacaaactagaggagtaaaagtgcaattaaacc 18749726  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 7979641 - 7979573
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaat 81  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||  ||||||||||||||    
T  7979641 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactata-agggaaaagtgcaat 7979573  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 17851053 - 17850981
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    ||||||||||||| ||||||||||  || ||||||| | ||||| |||||||||||||| ||||||||||||||    
T  17851053 aaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 17850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17851380 - 17851433
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactata 65  Q
    |||||||||||||||||||||| || |||||||||| | ||||| |||||||||    
T  17851380 aaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata 17851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 19141522 - 19141447
Alignment:
Q  10 ggtaaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    |||||| ||||||||||||||||||||  || ||||| | | ||||| |||||||||||||| ||||||||||||||    
T  19141522 ggtaaattcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaa 19141447  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 50484 - 50557
Alignment:
Q  13 aaaatcgctcgtttaaaactatggatgt--aaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    ||||| ||||||||||||||||||  ||  ||||||| | ||||| ||||||||||||||||||||||||||||    
T  50484 aaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 50557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 50149 - 50078
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||| | | |||||||||||||||||||| |||||||||||||    
T  50149 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaa 50078  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 185252 - 185325
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactataggg-ggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| |||||||||||| ||||||||||||||||    
T  185252 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 184915 - 184842
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatag-ggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||| | | | |||||||||||||| || |||||||||||||||    
T  184915 aaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 19696 - 19624
Alignment:
Q  13 aaaatcgctcgtttaaaactat-ggatgtaaaatcgtataattgacaaactatagggggaaaagtgcaattaa 84  Q
    |||||||||||||||||||||| || || ||||||| | ||||| ||||||||| |||||||| |||||||||    
T  19696 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaa 19624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 20050 - 20108
Alignment:
Q  41 aaaatcgtataattgacaaactata-gggggaaaagtgcaattaaacctattttaaatt 98  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  20050 aaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcctatattaaatt 20108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 9982 - 9908
Alignment:
Q  13 aaaatcgctcgtttaaaactat--ggatgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    ||||||||||||||||||||||  || || ||||||| | ||||| |||||||||||||| ||||||||||||||    
T  9982 aaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 9908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 183410 - 183364
Alignment:
Q  41 aaaatcgtataattgacaaactatagggggaaaagtgcaattaaacc 87  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||    
T  183410 aaaatcgtacaattgacaaaagatagggggaaaagtgcaattaaacc 183364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 38673 - 38746
Alignment:
Q  13 aaaatcgctcgtttaaaactatgga-tgtaaaatcgtataattgacaaactataggggg-aaaagtgcaattaa 84  Q
    ||||||| |||||||| |||||||  || ||||||| | ||||| |||||||||||||| ||||||||||||||    
T  38673 aaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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