View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16652_low_22 (Length: 287)
Name: NF16652_low_22
Description: NF16652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16652_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 246879 - 247137
Alignment:
| Q |
19 |
attctacaccataaaagagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttaaatgagttattggaaatgaatgt |
118 |
Q |
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| T |
246879 |
attctacaccataa--gagagatggagatataacaatgtcataccaagaaagatataacaaaaaatacgaagtgttgaatgagttattggaaatgaatgt |
246976 |
T |
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| Q |
119 |
ttttaaaagtaccaacattaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaaat |
218 |
Q |
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| T |
246977 |
ttttaaaagtaccaacactaatggattgatctaattgataaagatataggcttttttaacccaatcaaaagttcgttctcgaataactaaattaaaaaat |
247076 |
T |
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| Q |
219 |
aaagttaagcaatttgtatcatctctgtattcgtgaccttagttcaattgataagaataat |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
247077 |
aaagttaagcaatttgtatcatctctgtattcgtgaccttagttcaattgatgagaataat |
247137 |
T |
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