View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16653_high_4 (Length: 204)
Name: NF16653_high_4
Description: NF16653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16653_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 45284209 - 45284382
Alignment:
| Q |
15 |
atactaattggactatatacatagatagatatctaattaattcatgatttttatgtcattattgttacacttttatttgtatgccagcgtgactatgaaa |
114 |
Q |
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| T |
45284209 |
atactaattggactatatacatagatagatatctaattaattcatgatttttatgtcattattgtcacacttttatttgtatgccagcgtgactatgaaa |
45284308 |
T |
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| Q |
115 |
aagagattgaggatttgacaacggaattggccagctacaaggtgcaattagaagcaaagcatgttgcacacatc |
188 |
Q |
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| T |
45284309 |
aagagattgaggatttgacaacggaattggccagctacaaggtgcaattagaagcaaagcatgttgcacacatc |
45284382 |
T |
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