View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16653_low_8 (Length: 289)

Name: NF16653_low_8
Description: NF16653
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16653_low_8
NF16653_low_8
[»] chr1 (18 HSPs)
chr1 (19-174)||(51453870-51454008)
chr1 (177-281)||(44112679-44112783)
chr1 (177-281)||(45427739-45427843)
chr1 (177-281)||(41065155-41065259)
chr1 (177-281)||(48119630-48119734)
chr1 (177-281)||(35000107-35000211)
chr1 (177-281)||(35003296-35003400)
chr1 (177-281)||(38113189-38113293)
chr1 (177-281)||(38335920-38336024)
chr1 (177-281)||(45705827-45705931)
chr1 (177-281)||(46168385-46168489)
chr1 (177-281)||(45639726-45639830)
chr1 (177-281)||(26585464-26585568)
chr1 (177-232)||(14427349-14427404)
chr1 (177-263)||(43571098-43571184)
chr1 (213-263)||(48498974-48499024)
chr1 (175-263)||(2497574-2497662)
chr1 (177-263)||(5489778-5489864)
[»] chr8 (19 HSPs)
chr8 (177-281)||(34304790-34304894)
chr8 (177-281)||(35181518-35181622)
chr8 (177-281)||(18066712-18066816)
chr8 (175-281)||(33629987-33630093)
chr8 (177-281)||(16603620-16603724)
chr8 (229-281)||(10678146-10678198)
chr8 (197-281)||(16358827-16358911)
chr8 (175-263)||(29800962-29801050)
chr8 (174-262)||(30912575-30912663)
chr8 (177-263)||(42197447-42197533)
chr8 (175-263)||(20148760-20148848)
chr8 (175-263)||(42295195-42295283)
chr8 (175-263)||(26125635-26125723)
chr8 (175-263)||(42699257-42699345)
chr8 (213-263)||(2547034-2547084)
chr8 (177-263)||(11582768-11582854)
chr8 (177-263)||(29705364-29705450)
chr8 (177-263)||(36743495-36743581)
chr8 (211-263)||(31384700-31384752)
[»] chr3 (19 HSPs)
chr3 (177-281)||(9434126-9434230)
chr3 (177-281)||(34791831-34791935)
chr3 (197-281)||(51757615-51757699)
chr3 (177-281)||(4190259-4190363)
chr3 (177-281)||(10457886-10457990)
chr3 (177-281)||(25996270-25996374)
chr3 (177-280)||(52627972-52628075)
chr3 (177-263)||(40808867-40808953)
chr3 (174-274)||(27748562-27748662)
chr3 (177-263)||(25413683-25413769)
chr3 (177-263)||(42100690-42100776)
chr3 (177-263)||(45126940-45127026)
chr3 (177-275)||(53273684-53273782)
chr3 (217-274)||(51249350-51249407)
chr3 (177-263)||(24688414-24688500)
chr3 (177-263)||(42394431-42394517)
chr3 (213-263)||(46941091-46941141)
chr3 (177-263)||(54237098-54237184)
chr3 (175-263)||(53581870-53581958)
[»] chr2 (22 HSPs)
chr2 (177-281)||(43114559-43114663)
chr2 (174-281)||(11825648-11825755)
chr2 (166-281)||(41281968-41282083)
chr2 (177-282)||(16803970-16804075)
chr2 (177-282)||(16843252-16843357)
chr2 (177-281)||(12415454-12415558)
chr2 (177-281)||(12427514-12427618)
chr2 (177-281)||(18491707-18491811)
chr2 (175-260)||(6518484-6518568)
chr2 (177-281)||(966828-966932)
chr2 (181-281)||(34895735-34895835)
chr2 (175-281)||(4299414-4299520)
chr2 (199-281)||(4451944-4452026)
chr2 (197-281)||(12531657-12531740)
chr2 (177-274)||(34817777-34817874)
chr2 (177-261)||(43335777-43335861)
chr2 (212-263)||(30838669-30838720)
chr2 (177-263)||(1750416-1750502)
chr2 (177-263)||(4764738-4764824)
chr2 (177-263)||(19047159-19047245)
chr2 (213-274)||(13780736-13780797)
chr2 (175-263)||(43490413-43490501)
[»] chr7 (17 HSPs)
chr7 (177-281)||(40236921-40237025)
chr7 (177-281)||(33384872-33384977)
chr7 (177-281)||(27535225-27535329)
chr7 (177-281)||(31408627-31408731)
chr7 (177-281)||(31513289-31513393)
chr7 (175-263)||(43343636-43343724)
chr7 (175-263)||(44416946-44417034)
chr7 (177-263)||(42972854-42972940)
chr7 (175-274)||(4638200-4638299)
chr7 (175-263)||(10573749-10573837)
chr7 (175-263)||(44326178-44326266)
chr7 (213-263)||(5015433-5015483)
chr7 (213-263)||(35069759-35069809)
chr7 (178-263)||(26898414-26898499)
chr7 (177-263)||(9216304-9216389)
chr7 (177-263)||(24001024-24001110)
chr7 (177-263)||(42538443-42538529)
[»] chr5 (10 HSPs)
chr5 (177-281)||(32473388-32473492)
chr5 (177-281)||(17208076-17208180)
chr5 (177-281)||(30622713-30622816)
chr5 (175-263)||(5256995-5257083)
chr5 (177-263)||(7617135-7617221)
chr5 (177-263)||(22512307-22512393)
chr5 (177-263)||(33801471-33801557)
chr5 (177-263)||(2614661-2614747)
chr5 (177-263)||(18033984-18034070)
chr5 (177-263)||(41334675-41334761)
[»] chr4 (29 HSPs)
chr4 (177-281)||(55272370-55272474)
chr4 (177-281)||(17619146-17619250)
chr4 (177-281)||(32728359-32728463)
chr4 (175-281)||(35037005-35037111)
chr4 (177-281)||(711962-712066)
chr4 (181-281)||(48435573-48435673)
chr4 (175-281)||(38851513-38851619)
chr4 (177-281)||(960864-960968)
chr4 (177-281)||(46827700-46827804)
chr4 (175-280)||(3756242-3756346)
chr4 (175-263)||(27893854-27893942)
chr4 (177-255)||(49229684-49229762)
chr4 (175-263)||(43514698-43514786)
chr4 (211-281)||(19879990-19880060)
chr4 (177-263)||(27864566-27864652)
chr4 (177-274)||(28988475-28988572)
chr4 (229-281)||(36004110-36004162)
chr4 (177-263)||(27550311-27550397)
chr4 (213-263)||(39631139-39631189)
chr4 (177-265)||(48463460-48463548)
chr4 (212-263)||(33703178-33703229)
chr4 (175-274)||(41327544-41327643)
chr4 (177-263)||(1771278-1771364)
chr4 (177-263)||(23035982-23036068)
chr4 (213-263)||(43949813-43949863)
chr4 (177-263)||(55966358-55966444)
chr4 (177-262)||(28982835-28982920)
chr4 (177-274)||(41847973-41848070)
chr4 (175-263)||(31680902-31680990)
[»] scaffold0100 (1 HSPs)
scaffold0100 (177-281)||(35450-35554)
[»] chr6 (14 HSPs)
chr6 (177-281)||(33242405-33242509)
chr6 (175-281)||(27441542-27441648)
chr6 (177-275)||(33253915-33254013)
chr6 (175-263)||(24203999-24204087)
chr6 (177-263)||(7367551-7367637)
chr6 (177-263)||(13743233-13743319)
chr6 (177-263)||(13748733-13748819)
chr6 (177-263)||(26670021-26670107)
chr6 (175-260)||(30735982-30736067)
chr6 (177-281)||(31109216-31109320)
chr6 (177-260)||(7273350-7273433)
chr6 (177-263)||(7292749-7292835)
chr6 (177-263)||(9698345-9698431)
chr6 (177-263)||(26466801-26466887)
[»] scaffold0003 (1 HSPs)
scaffold0003 (175-281)||(45713-45819)
[»] scaffold0119 (1 HSPs)
scaffold0119 (177-263)||(687-773)
[»] scaffold0385 (1 HSPs)
scaffold0385 (197-263)||(11273-11339)
[»] scaffold0038 (1 HSPs)
scaffold0038 (177-263)||(112657-112743)


Alignment Details
Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 51454008 - 51453870
Alignment:
Q  19 ctgctgaaaatggcgaggtggagaaacctgaacgttgagaatgtttgttacttgtattaggcatcgcatcagcgtggtatagtgtaaggagtggggtcca 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                |||||| |||||||    
T  51454008 ctgctgaaaatggcgaggtggagaaaactgaacgttgagaatgtttgttacttgtattaggcatcgcatc----------------aggagt-gggtcca 51453926  T
Q  119 taaaaccgattctaaaatagcaatgagtcataacttgctcattaaggttttttccg 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51453925 taaaaccgattctaaaatagcaataagtcataacttgctcattaaggttttttccg 51453870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 44112679 - 44112783
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44112679 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 44112778  T
Q  277 atctc 281  Q
    |||||    
T  44112779 atctc 44112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 45427843 - 45427739
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    ||||||||||||||  | | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45427843 aaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 45427744  T
Q  277 atctc 281  Q
    |||||    
T  45427743 atctc 45427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 41065155 - 41065259
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| || ||||||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  41065155 aaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctttc 41065254  T
Q  277 atctc 281  Q
     ||||    
T  41065255 ctctc 41065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 48119630 - 48119734
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  48119630 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 48119729  T
Q  277 atctc 281  Q
    |||||    
T  48119730 atctc 48119734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 35000211 - 35000107
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||| || ||||| ||||||||||||||| ||| || |||||||||||||| ||||||||||    
T  35000211 aaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctttc 35000112  T
Q  277 atctc 281  Q
    |||||    
T  35000111 atctc 35000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 35003296 - 35003400
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||| ||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  35003296 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctttc 35003395  T
Q  277 atctc 281  Q
    |||||    
T  35003396 atctc 35003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 38113293 - 38113189
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    ||||||||| |||| || | ||||||||||||| |||||||||||  |||||||||  ||||||||||||| ||||||||||||||||| || |||||||    
T  38113293 aaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctttc 38113194  T
Q  277 atctc 281  Q
    |||||    
T  38113193 atctc 38113189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 38335920 - 38336024
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||||||  |||||||||   ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  38335920 aaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 38336019  T
Q  277 atctc 281  Q
    |||||    
T  38336020 atctc 38336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 45705827 - 45705931
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    ||||||||| |||| || | ||||||||||||  |||||||||||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  45705827 aaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 45705926  T
Q  277 atctc 281  Q
    |||||    
T  45705927 atctc 45705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 46168385 - 46168489
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||| |  |||||||||||   |||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  46168385 aaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 46168484  T
Q  277 atctc 281  Q
    |||||    
T  46168485 atctc 46168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 45639830 - 45639726
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| ||   ||||||||||||  |||||||||||  ||| ||||| ||| |||||||||| |||||||||||| |||| ||||||||||    
T  45639830 aaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctttc 45639731  T
Q  277 atctc 281  Q
    |||||    
T  45639730 atctc 45639726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 26585464 - 26585568
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    ||||||||| |||| |||  |||||||||||||  ||||||||||  ||||||||| ||| ||||| |||| |||||||| ||| |||| ||||||||||    
T  26585464 aaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctttc 26585563  T
Q  277 atctc 281  Q
    |||||    
T  26585564 atctc 26585568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 14427349 - 14427404
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcatta 232  Q
    |||||||||||||| || | ||||||||||||| ||||||||||| ||||||||||    
T  14427349 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 43571184 - 43571098
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  43571184 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 43571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 48499024 - 48498974
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  48499024 attgtacacctcatgtattagggatattttggtaagttcatctcacaacca 48498974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 2497662 - 2497574
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || |||||| |||||||  | |||||||||  |||  |||| ||| |||||||||| |||||||||||||||    
T  2497662 gaaaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaacca 2497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 5489778 - 5489864
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  5489778 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 5489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 34304790 - 34304894
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34304790 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 34304889  T
Q  277 atctc 281  Q
    |||||    
T  34304890 atctc 34304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 35181518 - 35181622
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35181518 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 35181617  T
Q  277 atctc 281  Q
    |||||    
T  35181618 atctc 35181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 18066816 - 18066712
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||  ||||||||||   |||| |||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  18066816 aaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctttc 18066717  T
Q  277 atctc 281  Q
    |||||    
T  18066716 atctc 18066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 33630093 - 33629987
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||||| || || | |||||||||||||   |||||||||   |||||||||||||||||| |||||||||||||||||| ||| ||||||||    
T  33630093 gaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T
Q  275 tcatctc 281  Q
    |||||||    
T  33629993 tcatctc 33629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 16603724 - 16603620
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||  || | |||||||||||||  |||| |||||  |||||||||  ||||||||||||| ||||||||||||||||| || |||||||    
T  16603724 aaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctttc 16603625  T
Q  277 atctc 281  Q
    |||||    
T  16603624 atctc 16603620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 10678198 - 10678146
Alignment:
Q  229 attagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10678198 attaaggacattttggtaaattcatctcacaaccatactttctctttcatctc 10678146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 16358911 - 16358827
Alignment:
Q  197 tttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    ||||||||||||| ||||||||||   ||||||||| | | |||||| ||| ||||||||||||||||| ||||| |||||||||    
T  16358911 tttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttctttttcatctc 16358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 29801050 - 29800962
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || |||||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  29801050 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 29800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 30912663 - 30912575
Alignment:
Q  174 ggaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacc 262  Q
    ||||||||||||||||| || | |||| || ||||| | ||||||||| ||||| |||||||  |||||||||| ||||||||||||||    
T  30912663 ggaaaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaacc 30912575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 42197533 - 42197447
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || |||||| || ||||| | |||| |||||  ||| |||||||| |||||||||| |||||||||||||||    
T  42197533 aaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaacca 42197447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 20148760 - 20148848
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || | |||| |||||||  | ||||||||| ||||  |||||||| |||||||||| |||||||||||||||    
T  20148760 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaacca 20148848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 42295195 - 42295283
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| || | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  42295195 gaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaacca 42295283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 26125635 - 26125723
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || | |||| |||||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  26125635 gaaaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 26125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 42699257 - 42699345
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| || | |||| || ||||| | ||||||||| | ||| |||| ||| ||||| |||| |||||||||||||||    
T  42699257 gaaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaacca 42699345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 2547034 - 2547084
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| ||||| |||||||| ||||| |||| |||||||||||||||    
T  2547034 attgtacacctcatgtattagggatattttagtaagttcatctcacaacca 2547084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 11582768 - 11582854
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  11582768 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 11582854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 29705364 - 29705450
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |  ||||| | |||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  29705364 aaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaacca 29705450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 36743581 - 36743495
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  36743581 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 36743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 31384700 - 31384752
Alignment:
Q  211 ctattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||  |||| |||||| | |||||||||| |||||||||||||||    
T  31384700 ctattgtacaccccatgtattaggaatattttggtaagttcatctcacaacca 31384752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 9434126 - 9434230
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9434126 aaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 9434225  T
Q  277 atctc 281  Q
    |||||    
T  9434226 atctc 9434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 34791831 - 34791935
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||||||  ||||||| || ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  34791831 aaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctttc 34791930  T
Q  277 atctc 281  Q
    |||||    
T  34791931 atctc 34791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 51757615 - 51757699
Alignment:
Q  197 tttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  51757615 tttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctttcatctc 51757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 4190363 - 4190259
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| ||||||||||| | ||| ||||| || |||||||||| ||||||||||||||||| ||||||||||    
T  4190363 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctttc 4190264  T
Q  277 atctc 281  Q
    |||||    
T  4190263 atctc 4190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 10457990 - 10457886
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| || |||||||||||||| ||||||||||    
T  10457990 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 10457891  T
Q  277 atctc 281  Q
    |||||    
T  10457890 atctc 10457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 25996270 - 25996374
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||   ||||||||||  |||  |||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  25996270 aaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaaccatattttctctttc 25996369  T
Q  277 atctc 281  Q
    |||||    
T  25996370 atctc 25996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 52628075 - 52627972
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||| ||| || | ||||||||||||  ||||||||||| |||||||||| | | |||||||||| |||||||||||| |||| ||||||||||    
T  52628075 aaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctttc 52627976  T
Q  277 atct 280  Q
    ||||    
T  52627975 atct 52627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 40808867 - 40808953
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || |||||| || ||||| | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  40808867 aaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 40808953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 27748562 - 27748662
Alignment:
Q  174 ggaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctct 273  Q
    ||||||||||||||||| || | |||| ||||||||   ||| ||||| | ||| |||||||| |||||||||| ||||||||||||| ||| ||| |||    
T  27748562 ggaaaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatct 27748661  T
Q  274 t 274  Q
    |    
T  27748662 t 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 25413683 - 25413769
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||| | ||||||||| | ||| |||||||| ||||| |||| |||||||||||||||    
T  25413683 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaacca 25413769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 42100690 - 42100776
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || |||||   |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  42100690 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 42100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 45127026 - 45126940
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  45127026 aaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 45126940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 53273782 - 53273684
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 275  Q
    ||||||||| |||| ||||||||| || || ||   ||||||||   |||| |||||||| |||||||||| ||||||||||||||||| ||| |||||    
T  53273782 aaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 51249350 - 51249407
Alignment:
Q  217 tacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||| |||||||||| ||| |||||||||| ||||||||||||||| | ||||||||    
T  51249350 tacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 24688500 - 24688414
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |  ||||| | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  24688500 aaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 24688414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 42394517 - 42394431
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  42394517 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 42394431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 46941091 - 46941141
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  46941091 attgtacaccccatgtattagggatattttggtaagttcatctcacaacca 46941141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 54237098 - 54237184
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  54237098 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 54237184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 53581958 - 53581870
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| ||   |||| |||||||| | ||||||||    ||| |||||||| |||||| ||| |||||||||||||||    
T  53581958 gaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaacca 53581870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 43114559 - 43114663
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43114559 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 43114658  T
Q  277 atctc 281  Q
    |||||    
T  43114659 atctc 43114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 174 - 281
Target Start/End: Complemental strand, 11825755 - 11825648
Alignment:
Q  174 ggaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctct 273  Q
    ||||||||||||||||| || | ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  11825755 ggaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctct 11825656  T
Q  274 ttcatctc 281  Q
    ||||||||    
T  11825655 ttcatctc 11825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 41282083 - 41281968
Alignment:
Q  166 ttttttccggaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccata 265  Q
    |||||||  |||||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  41282083 ttttttcttgaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccata 41281984  T
Q  266 gtttctctttcatctc 281  Q
     |||||||||||||||    
T  41281983 ctttctctttcatctc 41281968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 16803970 - 16804075
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16803970 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16804069  T
Q  277 atctct 282  Q
    ||||||    
T  16804070 atctct 16804075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 16843252 - 16843357
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  16843252 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16843351  T
Q  277 atctct 282  Q
    ||||||    
T  16843352 atctct 16843357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 12415558 - 12415454
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  12415558 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12415459  T
Q  277 atctc 281  Q
    |||||    
T  12415458 atctc 12415454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 12427618 - 12427514
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  12427618 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12427519  T
Q  277 atctc 281  Q
    |||||    
T  12427518 atctc 12427514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 18491707 - 18491811
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| ||||||||||| |||||||||| | |||||||||||| ||||||||||||||||| || |||||||    
T  18491707 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctttc 18491806  T
Q  277 atctc 281  Q
    |||||    
T  18491807 atctc 18491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 6518568 - 6518484
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 260  Q
    |||||||||||||||| || | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6518568 gaaaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 966932 - 966828
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||||||||| | || ||||||||| |||||||||||| |||| ||||||||||    
T  966932 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctttc 966833  T
Q  277 atctc 281  Q
    |||||    
T  966832 atctc 966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 34895835 - 34895735
Alignment:
Q  181 tgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatct 280  Q
    |||||||||| || |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 34895736  T
Q  281 c 281  Q
    |    
T  34895735 c 34895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 4299520 - 4299414
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||| |||| || | ||||||||||||| |||||||||||  |||||||||  ||||||||||||| |||||||||||| |||| || |||||    
T  4299520 gaaaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatacttactctt 4299421  T
Q  275 tcatctc 281  Q
    | |||||    
T  4299420 taatctc 4299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 4452026 - 4451944
Alignment:
Q  199 taatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    ||||||||||   ||||||||||   |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  4452026 taatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctc 4451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 12531740 - 12531657
Alignment:
Q  197 tttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    ||||||||||||| | ||||||||| ||| |||||| || | ||||||||| ||||||||||||||||| |||||||||||||||    
T  12531740 tttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctc 12531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 34817874 - 34817777
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||| || | |||| ||| ||||   |||||||||  |||||| || | |||||||||||| ||||||||||||||| | ||||||||    
T  34817874 aaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 43335861 - 43335777
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaac 261  Q
    ||||||||| |||| ||||||||| || |||||   ||||||||   |||| |||||||| |||||||||| |||||||||||||    
T  43335861 aaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaac 43335777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 30838669 - 30838720
Alignment:
Q  212 tattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  30838669 tattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 30838720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 1750416 - 1750502
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||| | |||||||||   ||| |||||||| ||||| |||| |||||||||||||||    
T  1750416 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaacca 1750502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 4764824 - 4764738
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || |||||| || ||||| |||||||||||  |||| ||||   | |||||||||| |||||||||||||||    
T  4764824 aaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaacca 4764738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 19047159 - 19047245
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  19047159 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 19047245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 13780797 - 13780736
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||  ||| ||||||||| |||||| ||| ||||||||||||||| | ||||||||    
T  13780797 attgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 43490501 - 43490413
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| ||||||||| |||||    
T  43490501 gaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataacca 43490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 40236921 - 40237025
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40236921 aaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctttc 40237020  T
Q  277 atctc 281  Q
    |||||    
T  40237021 atctc 40237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 33384872 - 33384977
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacac-tattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 275  Q
    |||||||||||||| |||||||||||||||||| | ||||||| ||  |||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  33384872 aaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctcttt 33384971  T
Q  276 catctc 281  Q
    ||||||    
T  33384972 catctc 33384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 27535329 - 27535225
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||||  |||  ||||||||||||||||||||||||||| ||| ||||||||||    
T  27535329 aaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctttc 27535230  T
Q  277 atctc 281  Q
    |||||    
T  27535229 atctc 27535225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 31408731 - 31408627
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| ||||||||||   ||||||||| ||| |||||||||| ||||| ||||||||||| ||||||||||    
T  31408731 aaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctttc 31408632  T
Q  277 atctc 281  Q
    |||||    
T  31408631 atctc 31408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 31513289 - 31513393
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| ||   ||||||||||||| |||||||| ||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  31513289 aaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 31513388  T
Q  277 atctc 281  Q
    |||||    
T  31513389 atctc 31513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 43343724 - 43343636
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| ||||||||| |  ||||| |||||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  43343724 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaacca 43343636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 44417034 - 44416946
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| ||||||||| |  ||||| |||||||||||  |||| |||||||| |||||| ||| |||||||||||||||    
T  44417034 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaacca 44416946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 42972854 - 42972940
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||| ||| |||| |||| || ||||| | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  42972854 aaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 42972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 4638299 - 4638200
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||||| || | |||| |||||||| | |||||||||  |||  |||| ||| |||||||||| ||||||||||||||||| ||| ||||    
T  4638299 gaaaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 10573749 - 10573837
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || | |||| |||||||  |||||||||||  |||| |||||| | |||||||||| |||||||||||||||    
T  10573749 gaaaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaacca 10573837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 44326178 - 44326266
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || | |||| |||||||  | ||||||||| ||||  |||||||| |||||||||| |||||||||||||||    
T  44326178 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaacca 44326266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 5015433 - 5015483
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  5015433 attgtacacctcatgtattagggatattttggtaagttcatctcacaacca 5015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 35069759 - 35069809
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  35069759 attgtacacctcatgtattagggatattttggtaagttcatctcacaacca 35069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 26898499 - 26898414
Alignment:
Q  178 aaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||||||| || | |||| |||||||| | ||||||||   |||| |||||||| |||||||||| ||||||| |||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaacca 26898414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 9216304 - 9216389
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || || |  |||||||||||  |||||||||| || |||||||||| |||||||||||||||    
T  9216304 aaaatgttacatgaacaccctttattcctatatcctattgtacacc-catgcattagagatattttggtaagttcatctcacaacca 9216389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 24001110 - 24001024
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  24001110 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 24001024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 42538529 - 42538443
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  42538529 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 42538443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 32473492 - 32473388
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | |||||||||||||  ||||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  32473492 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctttc 32473393  T
Q  277 atctc 281  Q
    |||||    
T  32473392 atctc 32473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 17208076 - 17208180
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||| ||| || | |||||||||||||  ||||||||||  ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  17208076 aaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctttc 17208175  T
Q  277 atctc 281  Q
    |||||    
T  17208176 atctc 17208180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 30622816 - 30622713
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| |||| ||||||||||||| ||||||||  |  ||||||||| ||| |||||||||| || |||||||||||||| ||||||||||    
T  30622816 aaaatgttacatgaacatcctttaatcatacaccctattgtaagcc-catgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 30622718  T
Q  277 atctc 281  Q
    |||||    
T  30622717 atctc 30622713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 5256995 - 5257083
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || |||||| |||||||  | |||||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  5256995 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaacca 5257083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 7617135 - 7617221
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |||||||| | ||| |||||  |||| |||||||| |||||||||| |||||||||||||||    
T  7617135 aaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaacca 7617221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 22512307 - 22512393
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||| | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  22512307 aaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaacca 22512393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 33801471 - 33801557
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| |||| |||| |  ||||| | |||||||||  |||| |||||||| ||||| |||| |||||||||||||||    
T  33801471 aaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaacca 33801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 2614747 - 2614661
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  2614747 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 2614661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 18033984 - 18034070
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||| | |||||||||   ||| |||||||| ||||| |||| |||||||||||||||    
T  18033984 aaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaacca 18034070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 41334761 - 41334675
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| ||||||||   ||| |||||   ||| |||||||| |||||||||| |||||||||||||||    
T  41334761 aaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaacca 41334675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 55272474 - 55272370
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  55272474 aaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 55272375  T
Q  277 atctc 281  Q
    |||||    
T  55272374 atctc 55272370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 17619250 - 17619146
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  17619250 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 17619151  T
Q  277 atctc 281  Q
    |||||    
T  17619150 atctc 17619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 32728359 - 32728463
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||  ||||||||| ||||||||| |||| |||||||||||| |||| ||||||||||    
T  32728359 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctttc 32728458  T
Q  277 atctc 281  Q
    |||||    
T  32728459 atctc 32728463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 35037005 - 35037111
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||||||  ||||||||| ||| |||||||||| ||||||||||||||||| ||| ||||    
T  35037005 gaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctt 35037104  T
Q  275 tcatctc 281  Q
    || ||||    
T  35037105 tcttctc 35037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 711962 - 712066
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||   |||||||| ||| |||||||||| |||||||||||| |||| ||||||||||    
T  711962 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctttc 712061  T
Q  277 atctc 281  Q
    |||||    
T  712062 atctc 712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 48435673 - 48435573
Alignment:
Q  181 tgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatct 280  Q
    |||||||||| || |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  48435673 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 48435574  T
Q  281 c 281  Q
    |    
T  48435573 c 48435573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 38851513 - 38851619
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||||||||  ||| ||||||||||||   || |||||||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||    
T  38851513 gaaaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T
Q  275 tcatctc 281  Q
    |||||||    
T  38851613 tcatctc 38851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 960968 - 960864
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||   || |||||||||||||||||||| ||||||| | || | || ||||||||||    
T  960968 aaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtactttctctttc 960869  T
Q  277 atctc 281  Q
    |||||    
T  960868 atctc 960864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 46827804 - 46827700
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||| |||||||||||   |||||||| | || ||||||||| || ||||||||| |||| ||||||||||    
T  46827804 aaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctttc 46827705  T
Q  277 atctc 281  Q
    |||||    
T  46827704 atctc 46827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 3756346 - 3756242
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||||| || | ||||||||||||| |||||||||||  ||||||||| ||| ||||| |||| || ||||||||| |||| ||| ||||    
T  3756346 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctt 3756248  T
Q  275 tcatct 280  Q
    ||||||    
T  3756247 tcatct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 27893942 - 27893854
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || |||||| |||||||  | |||||||||  |||| |||||||| ||||||||||||||||||||||||||    
T  27893942 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaacca 27893854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 49229762 - 49229684
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatct 255  Q
    ||||||||| |||| |||| ||||||||||||| ||||||||||| |||||||||| ||| ||| |||||| |||||||    
T  49229762 aaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 43514786 - 43514698
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| || | |||| || ||||| | ||||||||| ||||| |||||||  |||||||||| |||||||||||||||    
T  43514786 gaaaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaacca 43514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 19879990 - 19880060
Alignment:
Q  211 ctattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    |||||||||||  |||  |||| |||||||||||||| |||||||||||| |||| |||||||||||||||    
T  19879990 ctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctc 19880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 27864566 - 27864652
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || |||||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  27864566 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 27864652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 28988475 - 28988572
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||| || | |||| ||||||||   |||||||||  |||||| ||||||||||||| ||| ||||||||| ||||| | ||||||||    
T  28988475 aaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 36004162 - 36004110
Alignment:
Q  229 attagggacattttggtaatttcatctcacaaccatagtttctctttcatctc 281  Q
    ||||||||||||||| ||| || |||||||||||||| |||||||||||||||    
T  36004162 attagggacattttgataaatttatctcacaaccatactttctctttcatctc 36004110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 27550311 - 27550397
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |  ||||| | ||||||||| ||||| |||||||| |||||||||| ||||||| |||||||    
T  27550311 aaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaacca 27550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 39631139 - 39631189
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  39631139 attgtacacctcatgtattagggatattttggtaagttcatctcacaacca 39631189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 48463548 - 48463460
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccata 265  Q
    |||||||||||| | || |||||| |||||||    ||||||||   |||| |||||||| |||||||||| |||||||||||||||||    
T  48463548 aaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccata 48463460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 33703178 - 33703229
Alignment:
Q  212 tattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  33703178 tattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 33703229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 41327643 - 41327544
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||||||   || | |||| ||| |||| | ||||||||| | ||||| || |||||||||||||| ||||||||||| ||| | ||||||||    
T  41327643 gaaaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 1771364 - 1771278
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||| | |||||||||  |||| ||||| || |||||| ||| |||||||||||||||    
T  1771364 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaacca 1771278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 23035982 - 23036068
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| | || |||| || ||||| |||||||||||   ||  |||||||| ||||| |||| |||||||||||||||    
T  23035982 aaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaacca 23036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 43949863 - 43949813
Alignment:
Q  213 attgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  43949863 attgtacaccccatgtattagggatattttggtaagttcatctcacaacca 43949813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 55966444 - 55966358
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || | |||| |||||||  | ||||||||   |||| |||||||| |||||||||| |||||||||||||||    
T  55966444 aaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 55966358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 28982920 - 28982835
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacc 262  Q
    |||||||||||||| || | |||| |  ||||| ||||||||||   |||  |||||||| |||||||||| ||||||||||||||    
T  28982920 aaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaacc 28982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 41847973 - 41848070
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    ||||||||||| || |||| |||  ||| ||||   |||||||||  |||||||||| |||||||||| || |||||| |||||||| | ||||||||    
T  41847973 aaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 31680902 - 31680990
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | | || |||||| |||||||  | |||||||||  | |  |||||||| |||||||||| |||||||||||||||    
T  31680902 gaaaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaacca 31680990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 35554 - 35450
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||| | || |||||||||||||||  ||||||||||  |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  35554 aaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctttc 35455  T
Q  277 atctc 281  Q
    |||||    
T  35454 atctc 35450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 33242405 - 33242509
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || |||||||||||||||  ||||||||||  |||| |||| |||||||||||||| |||||||||||| |||| ||||||||||    
T  33242405 aaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctttc 33242504  T
Q  277 atctc 281  Q
    |||||    
T  33242505 atctc 33242509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 27441542 - 27441648
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||    ||| |||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  27441542 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T
Q  275 tcatctc 281  Q
    |||||||    
T  27441642 tcatctc 27441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 33253915 - 33254013
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctcttt 275  Q
    |||||||||||||| || |||||||||| |||| |||||||||||  |||||||||||||||| ||||||| |||||||||||| |||| ||| |||||    
T  33253915 aaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttt 33254013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 24204087 - 24203999
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||||| || |||||| || ||||| |||||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  24204087 gaaaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaacca 24203999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 7367551 - 7367637
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||| |||| ||||||||| ||||||||   ||||||||   |||| |||||||| |||||||||| |||||||||||||||    
T  7367551 aaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 7367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 13743319 - 13743233
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  13743319 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 13743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 13748819 - 13748733
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| |||||||  | |||||||||  |||| |||||||| |||||||||| |||||||||||||||    
T  13748819 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 13748733  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 26670107 - 26670021
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || |||||   ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  26670107 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 26670021  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 30735982 - 30736067
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 260  Q
    |||||||||||||||| ||   |||| || ||||| | ||||||||| ||||| ||||| || |||||||||| ||||||||||||    
T  30735982 gaaaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaa 30736067  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 31109320 - 31109216
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctttc 276  Q
    |||||||||||||| || | ||||||||||||  | ||| |||||  |||||| |||||| |||||| ||| |||| || || |||| | ||||||||||    
T  31109320 aaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctttc 31109221  T
Q  277 atctc 281  Q
    |||||    
T  31109220 atctc 31109216  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 7273433 - 7273350
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaa 260  Q
    |||||||||||||| || | |||| || |||||  ||||||||||  |||| ||||| || |||||||||| ||||||||||||    
T  7273433 aaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaa 7273350  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 7292749 - 7292835
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    ||||||||||| || || |||||| ||||||||   ||| |||||   ||| |||||||| |||||||||| |||||||||||||||    
T  7292749 aaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaacca 7292835  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 9698431 - 9698345
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  9698431 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 9698345  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 26466801 - 26466887
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||| | || | |||| || ||||| | |||||||||  |||| |||||||  |||||||||| |||||||||||||||    
T  26466801 aaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaacca 26466887  T

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Target: scaffold0003 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 281
Target Start/End: Complemental strand, 45819 - 45713
Alignment:
Q  175 gaaaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaaccatagtttctctt 274  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||    ||| |||| ||| |||||||||| ||||||||||||||||| ||||||||    
T  45819 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T
Q  275 tcatctc 281  Q
    |||||||    
T  45719 tcatctc 45713  T

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Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 687 - 773
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || |||||   ||||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  687 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 773  T

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Target: scaffold0385 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 11273 - 11339
Alignment:
Q  197 tttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||| |||||||| | |||||||||  |||  |||||||| |||||||||| |||||||||||||||    
T  11273 tttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaacca 11339  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 112657 - 112743
Alignment:
Q  177 aaaatgttacatgagcatcatttaatcatacacactattgtacacatcatgcattagggacattttggtaatttcatctcacaacca 263  Q
    |||||||||||||| || | |||| || ||||  | |||||||||   ||| |||||||| |||||||||| |||||||||||||||    
T  112657 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaacca 112743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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