View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16654_high_6 (Length: 441)

Name: NF16654_high_6
Description: NF16654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16654_high_6
NF16654_high_6
[»] chr2 (47 HSPs)
chr2 (224-429)||(38979712-38979918)
chr2 (13-145)||(16672012-16672154)
chr2 (13-129)||(21352285-21352401)
chr2 (13-69)||(18511635-18511691)
chr2 (16-120)||(22596099-22596208)
chr2 (13-120)||(15441159-15441266)
chr2 (16-145)||(10997252-10997375)
chr2 (13-75)||(7418197-7418259)
chr2 (15-116)||(34439868-34439965)
chr2 (17-72)||(15486567-15486622)
chr2 (224-263)||(41791283-41791322)
chr2 (224-254)||(5790870-5790900)
chr2 (224-254)||(9195053-9195083)
chr2 (224-254)||(10375040-10375070)
chr2 (224-254)||(11713484-11713514)
chr2 (224-254)||(26813865-26813895)
chr2 (224-254)||(33733212-33733242)
chr2 (224-262)||(41693974-41694012)
chr2 (224-253)||(10664984-10665013)
chr2 (224-253)||(10671912-10671941)
chr2 (224-253)||(11788387-11788416)
chr2 (15-48)||(13532811-13532844)
chr2 (224-253)||(16900177-16900206)
chr2 (224-253)||(16993568-16993597)
chr2 (100-145)||(18511557-18511601)
chr2 (224-253)||(19183782-19183811)
chr2 (224-253)||(19184122-19184151)
chr2 (224-253)||(22881613-22881642)
chr2 (224-253)||(24483862-24483891)
chr2 (224-253)||(26239131-26239160)
chr2 (224-253)||(26814200-26814229)
chr2 (224-253)||(27310876-27310905)
chr2 (224-253)||(33732862-33732891)
chr2 (224-253)||(36622250-36622279)
chr2 (224-253)||(37271739-37271768)
chr2 (224-253)||(37272073-37272102)
chr2 (224-253)||(38639412-38639441)
chr2 (224-253)||(38980224-38980253)
chr2 (224-253)||(40301975-40302004)
chr2 (224-253)||(40302310-40302339)
chr2 (224-253)||(41693674-41693703)
chr2 (224-253)||(43788858-43788887)
chr2 (224-253)||(44073778-44073807)
chr2 (224-252)||(3838235-3838263)
chr2 (224-252)||(10374775-10374803)
chr2 (225-253)||(29311600-29311628)
chr2 (225-253)||(42358843-42358871)
[»] chr8 (61 HSPs)
chr8 (13-145)||(6345305-6345436)
chr8 (13-145)||(31127226-31127357)
chr8 (13-145)||(37948910-37949041)
chr8 (256-400)||(8211554-8211698)
chr8 (256-427)||(9289769-9289942)
chr8 (13-145)||(43620004-43620145)
chr8 (13-145)||(26721123-26721264)
chr8 (13-128)||(1265121-1265246)
chr8 (13-145)||(13470864-13471005)
chr8 (13-145)||(3106183-3106314)
chr8 (60-145)||(26721290-26721374)
chr8 (13-145)||(4602596-4602737)
chr8 (54-145)||(32906903-32906993)
chr8 (13-129)||(4267360-4267486)
chr8 (13-68)||(32906994-32907049)
chr8 (13-131)||(15265966-15266083)
chr8 (30-145)||(42200050-42200174)
chr8 (18-63)||(34191151-34191196)
chr8 (13-69)||(3773900-3773956)
chr8 (222-262)||(34903505-34903545)
chr8 (52-95)||(40619725-40619768)
chr8 (224-254)||(1162908-1162938)
chr8 (224-254)||(4375691-4375721)
chr8 (13-75)||(7236388-7236450)
chr8 (224-254)||(10776470-10776500)
chr8 (224-254)||(15719655-15719685)
chr8 (224-254)||(16789340-16789370)
chr8 (224-254)||(28398755-28398785)
chr8 (224-254)||(33526051-33526081)
chr8 (224-254)||(40066791-40066821)
chr8 (224-254)||(40844155-40844185)
chr8 (224-253)||(1408324-1408353)
chr8 (224-253)||(1525809-1525838)
chr8 (224-253)||(1526143-1526172)
chr8 (224-253)||(4375981-4376010)
chr8 (224-253)||(7272420-7272449)
chr8 (224-253)||(10755499-10755528)
chr8 (224-253)||(14238751-14238780)
chr8 (224-253)||(14239051-14239080)
chr8 (224-253)||(14495069-14495098)
chr8 (224-253)||(16643661-16643690)
chr8 (224-253)||(16644015-16644044)
chr8 (224-253)||(16789075-16789104)
chr8 (224-253)||(18549201-18549230)
chr8 (224-253)||(19494119-19494148)
chr8 (224-253)||(19494384-19494413)
chr8 (224-253)||(22650464-22650493)
chr8 (224-253)||(22917564-22917593)
chr8 (224-253)||(24954981-24955010)
chr8 (224-253)||(25131111-25131140)
chr8 (224-253)||(27341562-27341591)
chr8 (13-74)||(28581458-28581519)
chr8 (224-253)||(29158354-29158383)
chr8 (224-253)||(29488081-29488110)
chr8 (224-253)||(32418318-32418347)
chr8 (224-253)||(33636322-33636351)
chr8 (224-253)||(40066497-40066526)
chr8 (224-253)||(43477163-43477192)
chr8 (224-252)||(4016906-4016934)
chr8 (224-252)||(6146920-6146948)
chr8 (13-69)||(10183199-10183255)
[»] scaffold0442 (1 HSPs)
scaffold0442 (256-427)||(13033-13208)
[»] chr3 (58 HSPs)
chr3 (256-427)||(51423956-51424129)
chr3 (256-400)||(11685956-11686100)
chr3 (13-128)||(37282612-37282737)
chr3 (13-128)||(19636513-19636638)
chr3 (13-145)||(32055836-32055977)
chr3 (17-145)||(25706301-25706439)
chr3 (12-68)||(29283081-29283137)
chr3 (13-129)||(1030476-1030602)
chr3 (13-68)||(48973707-48973762)
chr3 (60-128)||(39717244-39717312)
chr3 (40-131)||(48085299-48085390)
chr3 (13-69)||(19997460-19997516)
chr3 (224-256)||(25710841-25710873)
chr3 (224-263)||(4513253-4513292)
chr3 (224-254)||(8510213-8510243)
chr3 (223-253)||(10792940-10792970)
chr3 (224-254)||(10976977-10977007)
chr3 (224-254)||(15016387-15016417)
chr3 (224-254)||(40169625-40169655)
chr3 (224-254)||(44802281-44802311)
chr3 (224-253)||(3151750-3151779)
chr3 (224-253)||(3152082-3152111)
chr3 (224-253)||(3830134-3830163)
chr3 (224-253)||(3830487-3830516)
chr3 (224-253)||(4814540-4814569)
chr3 (224-253)||(4950037-4950066)
chr3 (224-253)||(5345660-5345689)
chr3 (224-253)||(13584338-13584367)
chr3 (224-253)||(18175791-18175820)
chr3 (224-253)||(20611020-20611049)
chr3 (224-253)||(20612869-20612898)
chr3 (224-253)||(21159453-21159482)
chr3 (224-253)||(21159788-21159817)
chr3 (224-253)||(22008526-22008555)
chr3 (224-253)||(22016044-22016073)
chr3 (224-253)||(22155929-22155958)
chr3 (224-253)||(26800140-26800169)
chr3 (224-253)||(28427579-28427608)
chr3 (224-253)||(28942525-28942554)
chr3 (224-253)||(29446177-29446206)
chr3 (224-253)||(29525105-29525134)
chr3 (224-253)||(30130158-30130187)
chr3 (224-253)||(30424628-30424657)
chr3 (224-253)||(31869927-31869956)
chr3 (224-253)||(34238598-34238627)
chr3 (224-253)||(37506867-37506896)
chr3 (224-253)||(37507193-37507222)
chr3 (224-253)||(39288573-39288602)
chr3 (224-253)||(39436718-39436747)
chr3 (224-253)||(39437080-39437109)
chr3 (224-253)||(44506582-44506611)
chr3 (224-253)||(51834608-51834637)
chr3 (224-253)||(51834913-51834942)
chr3 (224-253)||(53701634-53701663)
chr3 (224-252)||(3361789-3361817)
chr3 (224-252)||(22156264-22156292)
chr3 (13-69)||(27167770-27167826)
chr3 (224-256)||(49323779-49323811)
[»] chr7 (54 HSPs)
chr7 (13-145)||(27392591-27392722)
chr7 (13-145)||(1575843-1575984)
chr7 (13-131)||(28694701-28694819)
chr7 (13-145)||(36482605-36482731)
chr7 (13-129)||(31280147-31280263)
chr7 (13-145)||(323570-323711)
chr7 (13-69)||(10286492-10286548)
chr7 (59-129)||(36582534-36582604)
chr7 (55-145)||(6714228-6714317)
chr7 (23-120)||(40303678-40303776)
chr7 (224-265)||(44508709-44508749)
chr7 (224-264)||(16853560-16853600)
chr7 (13-145)||(29987961-29988087)
chr7 (224-264)||(48359046-48359086)
chr7 (224-259)||(1006829-1006864)
chr7 (224-254)||(1974008-1974038)
chr7 (224-254)||(7431950-7431980)
chr7 (224-254)||(13769773-13769803)
chr7 (224-254)||(19561153-19561183)
chr7 (224-254)||(25547461-25547491)
chr7 (224-254)||(31732100-31732130)
chr7 (224-254)||(45021493-45021523)
chr7 (224-253)||(1559676-1559705)
chr7 (224-253)||(6108334-6108363)
chr7 (224-253)||(6509208-6509237)
chr7 (224-253)||(8555770-8555799)
chr7 (100-145)||(10286414-10286458)
chr7 (224-253)||(12894373-12894402)
chr7 (224-253)||(13770052-13770081)
chr7 (224-253)||(14738975-14739004)
chr7 (224-253)||(17999465-17999494)
chr7 (224-253)||(17999692-17999721)
chr7 (224-253)||(19561421-19561450)
chr7 (224-253)||(19757748-19757777)
chr7 (224-253)||(20388274-20388303)
chr7 (224-253)||(21223719-21223748)
chr7 (224-253)||(21554724-21554753)
chr7 (224-253)||(23816670-23816699)
chr7 (224-253)||(28911577-28911606)
chr7 (224-253)||(28911877-28911906)
chr7 (224-253)||(31310650-31310679)
chr7 (224-253)||(35015191-35015220)
chr7 (224-253)||(35210486-35210515)
chr7 (224-253)||(37372875-37372904)
chr7 (224-253)||(39719613-39719642)
chr7 (224-253)||(39832906-39832935)
chr7 (224-253)||(44344760-44344789)
chr7 (224-253)||(44402960-44402989)
chr7 (224-253)||(44509025-44509054)
chr7 (224-253)||(45021827-45021856)
chr7 (224-253)||(45073314-45073343)
chr7 (224-252)||(6079810-6079838)
chr7 (224-264)||(18891536-18891576)
chr7 (225-253)||(35014928-35014956)
[»] chr4 (71 HSPs)
chr4 (256-427)||(7055245-7055420)
chr4 (13-145)||(24575122-24575263)
chr4 (256-427)||(14463066-14463239)
chr4 (13-145)||(9279925-9280066)
chr4 (13-145)||(46251898-46252029)
chr4 (13-128)||(7700297-7700422)
chr4 (13-129)||(34276963-34277079)
chr4 (13-145)||(47498805-47498946)
chr4 (13-145)||(18780894-18781035)
chr4 (13-128)||(40436458-40436573)
chr4 (13-129)||(56078452-56078568)
chr4 (13-129)||(42414514-42414640)
chr4 (16-129)||(42430004-42430122)
chr4 (13-127)||(31568102-31568221)
chr4 (54-129)||(3756978-3757053)
chr4 (17-75)||(31938653-31938711)
chr4 (13-145)||(20580592-20580728)
chr4 (80-145)||(47997031-47997095)
chr4 (224-261)||(50714232-50714269)
chr4 (224-260)||(35415604-35415640)
chr4 (224-259)||(22099537-22099572)
chr4 (52-95)||(24859057-24859100)
chr4 (224-263)||(46292382-46292421)
chr4 (66-128)||(6184090-6184152)
chr4 (224-254)||(8191362-8191392)
chr4 (224-254)||(50714536-50714566)
chr4 (224-254)||(53717145-53717175)
chr4 (224-253)||(123534-123563)
chr4 (224-253)||(2180220-2180249)
chr4 (224-253)||(9289266-9289295)
chr4 (224-253)||(13064159-13064188)
chr4 (224-253)||(13064436-13064465)
chr4 (224-253)||(13479582-13479611)
chr4 (224-253)||(16712662-16712691)
chr4 (224-253)||(18205156-18205185)
chr4 (224-253)||(22099883-22099912)
chr4 (224-253)||(23778964-23778993)
chr4 (224-253)||(24474934-24474963)
chr4 (224-265)||(28808999-28809040)
chr4 (224-253)||(28809151-28809180)
chr4 (224-253)||(29380881-29380910)
chr4 (224-253)||(29463884-29463913)
chr4 (224-253)||(32208542-32208571)
chr4 (224-253)||(32365094-32365123)
chr4 (224-253)||(32365454-32365483)
chr4 (224-253)||(34361803-34361832)
chr4 (224-253)||(35763647-35763676)
chr4 (224-253)||(36702000-36702029)
chr4 (224-253)||(41345853-41345882)
chr4 (224-253)||(41346189-41346218)
chr4 (224-253)||(45474567-45474596)
chr4 (224-253)||(45505600-45505629)
chr4 (224-253)||(45505865-45505894)
chr4 (224-253)||(46088031-46088060)
chr4 (224-253)||(46115750-46115779)
chr4 (224-253)||(46128884-46128913)
chr4 (224-253)||(46292622-46292651)
chr4 (224-253)||(51545629-51545658)
chr4 (224-253)||(51708693-51708722)
chr4 (224-253)||(51708998-51709027)
chr4 (224-253)||(52017505-52017534)
chr4 (224-253)||(52017841-52017870)
chr4 (224-253)||(52430071-52430100)
chr4 (224-253)||(52441763-52441792)
chr4 (224-253)||(53716921-53716950)
chr4 (224-253)||(55072389-55072418)
chr4 (224-252)||(13479273-13479301)
chr4 (13-68)||(24319123-24319179)
chr4 (13-69)||(26161365-26161421)
chr4 (224-260)||(26412555-26412591)
chr4 (13-69)||(47310086-47310142)
[»] chr1 (63 HSPs)
chr1 (13-145)||(5559393-5559524)
chr1 (13-145)||(14461716-14461842)
chr1 (13-145)||(41198477-41198613)
chr1 (13-145)||(33719567-33719698)
chr1 (13-131)||(28655593-28655711)
chr1 (65-131)||(24063941-24064007)
chr1 (13-69)||(24614828-24614884)
chr1 (54-145)||(41074903-41074993)
chr1 (7-63)||(31092025-31092081)
chr1 (224-262)||(52254450-52254488)
chr1 (13-145)||(16902572-16902708)
chr1 (52-95)||(11956332-11956375)
chr1 (224-254)||(7001868-7001898)
chr1 (223-253)||(12361011-12361041)
chr1 (224-262)||(21391087-21391125)
chr1 (224-254)||(22953527-22953557)
chr1 (224-254)||(24649349-24649379)
chr1 (224-254)||(26191358-26191388)
chr1 (224-254)||(26191705-26191735)
chr1 (224-254)||(29072833-29072863)
chr1 (224-254)||(35308082-35308112)
chr1 (224-262)||(44641403-44641441)
chr1 (224-254)||(48956037-48956067)
chr1 (224-253)||(990350-990379)
chr1 (224-253)||(1810927-1810956)
chr1 (224-253)||(4360597-4360626)
chr1 (224-253)||(6567467-6567496)
chr1 (224-253)||(11822004-11822033)
chr1 (224-253)||(11822336-11822365)
chr1 (224-253)||(13260292-13260321)
chr1 (224-253)||(13770489-13770518)
chr1 (224-253)||(14007489-14007518)
chr1 (224-253)||(18079631-18079660)
chr1 (224-253)||(18302358-18302387)
chr1 (224-253)||(18473272-18473301)
chr1 (224-253)||(18473566-18473595)
chr1 (224-253)||(19622655-19622684)
chr1 (224-253)||(22919684-22919713)
chr1 (224-253)||(26061956-26061985)
chr1 (224-253)||(26442563-26442592)
chr1 (232-269)||(26796057-26796093)
chr1 (224-253)||(29072497-29072526)
chr1 (224-253)||(32454265-32454294)
chr1 (224-253)||(32626529-32626558)
chr1 (224-253)||(32729020-32729049)
chr1 (224-253)||(33379888-33379917)
chr1 (224-253)||(34002911-34002940)
chr1 (224-253)||(35005444-35005473)
chr1 (224-253)||(35005715-35005744)
chr1 (224-253)||(35307715-35307744)
chr1 (224-253)||(41358369-41358398)
chr1 (224-253)||(41358634-41358663)
chr1 (224-253)||(41739091-41739120)
chr1 (224-253)||(45290457-45290486)
chr1 (224-253)||(45368490-45368519)
chr1 (224-253)||(48609565-48609594)
chr1 (224-253)||(50799130-50799159)
chr1 (224-252)||(3753214-3753242)
chr1 (224-252)||(4323829-4323857)
chr1 (224-252)||(27521577-27521605)
chr1 (224-252)||(34382948-34382976)
chr1 (225-253)||(41881318-41881346)
chr1 (224-252)||(44641079-44641107)
[»] chr5 (64 HSPs)
chr5 (13-145)||(40987340-40987481)
chr5 (13-145)||(13521491-13521622)
chr5 (13-145)||(27110655-27110786)
chr5 (13-145)||(13554768-13554909)
chr5 (43-129)||(41061218-41061304)
chr5 (13-145)||(33160518-33160659)
chr5 (62-145)||(1495912-1495994)
chr5 (13-63)||(14718254-14718304)
chr5 (13-72)||(10415846-10415905)
chr5 (30-129)||(42716110-42716209)
chr5 (224-263)||(42994058-42994097)
chr5 (13-59)||(29501331-29501377)
chr5 (13-69)||(12291328-12291384)
chr5 (224-264)||(26133172-26133212)
chr5 (224-259)||(3850293-3850328)
chr5 (224-259)||(6118470-6118505)
chr5 (224-271)||(18633932-18633978)
chr5 (224-259)||(28863809-28863844)
chr5 (224-254)||(21050884-21050914)
chr5 (224-254)||(25561704-25561734)
chr5 (224-254)||(28550826-28550856)
chr5 (224-254)||(29366920-29366950)
chr5 (224-254)||(33335997-33336027)
chr5 (224-254)||(40029468-40029498)
chr5 (224-253)||(293828-293857)
chr5 (224-253)||(2217494-2217523)
chr5 (224-253)||(2217825-2217854)
chr5 (224-253)||(4203456-4203485)
chr5 (224-253)||(4203741-4203770)
chr5 (224-253)||(5614166-5614195)
chr5 (224-253)||(5614501-5614530)
chr5 (224-253)||(5950176-5950205)
chr5 (224-253)||(7075572-7075601)
chr5 (224-253)||(10408928-10408957)
chr5 (224-253)||(10409297-10409326)
chr5 (224-253)||(10743724-10743753)
chr5 (224-253)||(11799129-11799158)
chr5 (224-253)||(16038377-16038406)
chr5 (224-253)||(18046038-18046067)
chr5 (224-253)||(18046319-18046348)
chr5 (224-253)||(18633599-18633628)
chr5 (224-253)||(23381950-23381979)
chr5 (224-253)||(23382268-23382297)
chr5 (224-253)||(25561970-25561999)
chr5 (224-253)||(25779133-25779162)
chr5 (224-253)||(26133384-26133413)
chr5 (224-253)||(28863510-28863539)
chr5 (224-253)||(29172857-29172886)
chr5 (224-253)||(29692744-29692773)
chr5 (224-253)||(29875696-29875725)
chr5 (224-253)||(30800494-30800523)
chr5 (224-253)||(30800821-30800850)
chr5 (224-253)||(31037712-31037741)
chr5 (225-254)||(35165936-35165965)
chr5 (224-253)||(35166911-35166940)
chr5 (224-253)||(35167136-35167165)
chr5 (224-253)||(36577722-36577751)
chr5 (224-253)||(36578054-36578083)
chr5 (224-253)||(38496753-38496782)
chr5 (224-253)||(38786159-38786188)
chr5 (224-253)||(39379581-39379610)
chr5 (224-252)||(29172524-29172552)
chr5 (13-69)||(35449612-35449668)
chr5 (13-57)||(41061322-41061366)
[»] chr6 (42 HSPs)
chr6 (13-145)||(16705332-16705456)
chr6 (13-145)||(7608247-7608388)
chr6 (256-400)||(24998886-24999030)
chr6 (13-145)||(21946710-21946851)
chr6 (17-129)||(10484361-10484472)
chr6 (13-69)||(10517589-10517645)
chr6 (13-145)||(3901105-3901240)
chr6 (33-125)||(10386171-10386261)
chr6 (16-68)||(13531376-13531428)
chr6 (224-263)||(1890423-1890462)
chr6 (224-263)||(31167171-31167210)
chr6 (26-120)||(33747895-33747990)
chr6 (224-254)||(494404-494434)
chr6 (224-254)||(15962360-15962390)
chr6 (224-254)||(17771910-17771940)
chr6 (224-254)||(19296378-19296408)
chr6 (224-254)||(34582528-34582558)
chr6 (224-253)||(2373179-2373208)
chr6 (224-253)||(2615872-2615901)
chr6 (224-253)||(2616211-2616240)
chr6 (224-253)||(3356142-3356171)
chr6 (224-253)||(6468310-6468339)
chr6 (224-253)||(7156131-7156160)
chr6 (224-253)||(8681087-8681116)
chr6 (224-253)||(9896608-9896637)
chr6 (224-253)||(14655379-14655408)
chr6 (224-253)||(15076175-15076204)
chr6 (224-253)||(15117011-15117040)
chr6 (224-253)||(22822622-22822651)
chr6 (224-253)||(23502511-23502540)
chr6 (224-253)||(23770410-23770439)
chr6 (224-253)||(24273828-24273857)
chr6 (224-253)||(24274102-24274131)
chr6 (224-253)||(24692950-24692979)
chr6 (224-253)||(25431825-25431854)
chr6 (224-253)||(30928681-30928710)
chr6 (224-253)||(33801714-33801743)
chr6 (224-253)||(34582863-34582892)
chr6 (224-252)||(494723-494751)
chr6 (15-51)||(4464304-4464340)
chr6 (224-252)||(23770162-23770190)
chr6 (224-252)||(31166871-31166899)
[»] scaffold0034 (1 HSPs)
scaffold0034 (43-145)||(47761-47862)
[»] scaffold0140 (1 HSPs)
scaffold0140 (14-129)||(15505-15620)
[»] scaffold0396 (1 HSPs)
scaffold0396 (13-128)||(1231-1356)
[»] scaffold0043 (1 HSPs)
scaffold0043 (13-69)||(16256-16312)
[»] scaffold0347 (1 HSPs)
scaffold0347 (224-254)||(4283-4313)
[»] scaffold0337 (1 HSPs)
scaffold0337 (224-254)||(12524-12554)
[»] scaffold0326 (2 HSPs)
scaffold0326 (224-262)||(4032-4070)
scaffold0326 (224-262)||(19214-19252)
[»] scaffold0105 (1 HSPs)
scaffold0105 (224-254)||(17937-17967)
[»] scaffold0065 (2 HSPs)
scaffold0065 (224-254)||(3531-3561)
scaffold0065 (224-253)||(3889-3918)
[»] scaffold1001 (1 HSPs)
scaffold1001 (224-253)||(2778-2807)
[»] scaffold0811 (1 HSPs)
scaffold0811 (224-253)||(1311-1340)
[»] scaffold0712 (1 HSPs)
scaffold0712 (224-253)||(5209-5238)
[»] scaffold0709 (1 HSPs)
scaffold0709 (224-253)||(5229-5258)
[»] scaffold0535 (1 HSPs)
scaffold0535 (224-253)||(8999-9028)
[»] scaffold0370 (1 HSPs)
scaffold0370 (224-253)||(260-289)
[»] scaffold0210 (2 HSPs)
scaffold0210 (224-253)||(14697-14726)
scaffold0210 (224-253)||(14983-15012)
[»] scaffold0060 (2 HSPs)
scaffold0060 (224-253)||(8330-8359)
scaffold0060 (224-253)||(8613-8642)
[»] scaffold0051 (2 HSPs)
scaffold0051 (224-253)||(5399-5428)
scaffold0051 (224-253)||(5679-5708)
[»] scaffold0021 (1 HSPs)
scaffold0021 (224-253)||(12182-12211)
[»] scaffold0016 (2 HSPs)
scaffold0016 (224-253)||(10168-10197)
scaffold0016 (224-253)||(10486-10515)
[»] scaffold0003 (1 HSPs)
scaffold0003 (224-253)||(366244-366273)


Alignment Details
Target: chr2 (Bit Score: 175; Significance: 5e-94; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 224 - 429
Target Start/End: Complemental strand, 38979918 - 38979712
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctag 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38979918 atttgcagggactaaaaccatattttagccagaaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctag 38979819  T
Q  324 aggattaac-nnnnnnnncacattcgtgatggtaatgtaattcattctcgaggaattcaaatgcatataaggaaaaaacactataaaatacaacatctat 422  Q
    |||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38979818 aggattaacaaaaaaaaacacattcgtgatggtaatgtaattcattctcgaggaattcaaatgcatataaggaaaaaacactataaaatacaacatctat 38979719  T
Q  423 gaagcta 429  Q
    |||||||    
T  38979718 gaagcta 38979712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 16672154 - 16672012
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  16672154 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 16672055  T
Q  103 gcggtttttccaaaacaatatccaa-acaccatccaaaaatatt 145  Q
    || ||||||||||||||| |||||| ||| ||||||||||||||    
T  16672054 gcagtttttccaaaacaacatccaacaca-catccaaaaatatt 16672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 21352285 - 21352401
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||||||| || ||||| |||||||| ||||| |||||||||||| |  |||| ||||||||||||||| |||||||||||     
T  21352285 atactaataaaagaataaataagtattaatatttatttttgcggctcggtacggttttgaaaaagtgatccaaaatccgatccgatcttagcggttttta 21352384  T
Q  113 caaaacaatatccaaac 129  Q
    |||||||| ||||||||    
T  21352385 caaaacaacatccaaac 21352401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 18511691 - 18511635
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  18511691 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggttt 18511635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 22596208 - 22596099
Alignment:
Q  16 ctaataaaataataaataagtataaaaatttacttttgcggttc-----ggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttt 110  Q
    ||||||||| ||||||||||||| || ||||| |||||||||||     |||| ||||||||||| |  ||||||||||||||| |||| ||||| ||||    
T  22596208 ctaataaaagaataaataagtattaatatttatttttgcggttcgttttggtttggttttgaaaaagtgatccgaaatccgatctgatcttagcgatttt 22596109  T
Q  111 tccaaaacaa 120  Q
    | ||||||||    
T  22596108 tacaaaacaa 22596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 15441266 - 15441159
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||| ||| || ||||| |||| |||||| ||| ||||||||||| |  |||||||||| |||| |||| ||||| ||| |     
T  15441266 atactaataaaacaataaataaatattaatatttattttttcggttcagtttggttttgaaaaagtgatccgaaatctgatctgatcctagcgatttata 15441167  T
Q  113 caaaacaa 120  Q
    ||||||||    
T  15441166 caaaacaa 15441159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 10997375 - 10997252
Alignment:
Q  16 ctaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaa 115  Q
    ||||||||| |||||||| |||| || |||||||||| ||||||||||||||||||| || |  |||  |||| |||| |     || |||||||| |||    
T  10997375 ctaataaaagaataaatatgtattaatatttacttttacggttcggttcggttttgagaaagtgatctaaaattcgattc-----taacggtttttacaa 10997281  T
Q  116 aacaatatccaaacaccatccaaaaatatt 145  Q
    ||||| ||||||||| ||||||||||||||    
T  10997280 aacaacatccaaaca-catccaaaaatatt 10997252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 7418259 - 7418197
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaa 75  Q
    ||||||||| || ||||||||||||| | ||||||||||||||||| | |||| |||||||||    
T  7418259 atactaatataagaataaataagtattagaatttacttttgcggtttgattcgattttgaaaa 7418197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 34439965 - 34439868
Alignment:
Q  15 actaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttcca 114  Q
    |||||||||||||||||||    | ||||| ||| | ||| ||| |||||||||||||||| | |||||| |||||||||| ||  ||||||||||| ||    
T  34439965 actaataaaataataaata----ttaaaatatacatatgcagtttggttcggttttgaaaaagtaatccggaatccgatccaattctagcggtttttaca 34439870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 15486622 - 15486567
Alignment:
Q  17 taataaaataataaataagtataaaaatttacttttgcggttcggttcggttttga 72  Q
    |||||||| ||||||||| ||| || |||||||||||||||| |||||| ||||||    
T  15486622 taataaaagaataaataaatattaatatttacttttgcggtttggttcgattttga 15486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 41791283 - 41791322
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  41791283 atttgcagggactaaaaccatattttagccaaaaaaaaaa 41791322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 5790870 - 5790900
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  5790870 atttgcagggactaaaaccatattttagcca 5790900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 9195083 - 9195053
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  9195083 atttgcagggactaaaaccatattttagcca 9195053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 10375040 - 10375070
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  10375040 atttgcagggactaaaaccatattttagcca 10375070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 11713514 - 11713484
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  11713514 atttgcagggactaaaaccatattttagcca 11713484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 26813895 - 26813865
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  26813895 atttgcagggactaaaaccatattttagcca 26813865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 33733212 - 33733242
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  33733212 atttgcagggactaaaaccatattttagcca 33733242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 41693974 - 41694012
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  41693974 atttgcagggactaaaatcatattttagccaaaaataaa 41694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 10665013 - 10664984
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10665013 atttgcagggactaaaaccatattttagcc 10664984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 10671912 - 10671941
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10671912 atttgcagggactaaaaccatattttagcc 10671941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 11788387 - 11788416
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  11788387 atttgcagggactaaaaccatattttagcc 11788416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 13532811 - 13532844
Alignment:
Q  15 actaataaaataataaataagtataaaaatttac 48  Q
    |||||||||||||||||||||||| |||||||||    
T  13532811 actaataaaataataaataagtattaaaatttac 13532844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 16900177 - 16900206
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16900177 atttgcagggactaaaaccatattttagcc 16900206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 16993568 - 16993597
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16993568 atttgcagggactaaaaccatattttagcc 16993597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 18511601 - 18511557
Alignment:
Q  100 atagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  18511601 atagcggttttgccaaaacaacatccaaaca-catccaaaaatatt 18511557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 19183811 - 19183782
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19183811 atttgcagggactaaaaccatattttagcc 19183782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 19184122 - 19184151
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19184122 atttgcagggactaaaaccatattttagcc 19184151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22881642 - 22881613
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22881642 atttgcagggactaaaaccatattttagcc 22881613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24483862 - 24483891
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24483862 atttgcagggactaaaaccatattttagcc 24483891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 26239131 - 26239160
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26239131 atttgcagggactaaaaccatattttagcc 26239160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 26814200 - 26814229
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26814200 atttgcagggactaaaaccatattttagcc 26814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 27310905 - 27310876
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  27310905 atttgcagggactaaaaccatattttagcc 27310876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 33732891 - 33732862
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  33732891 atttgcagggactaaaaccatattttagcc 33732862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 36622279 - 36622250
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  36622279 atttgcagggactaaaaccatattttagcc 36622250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 37271768 - 37271739
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  37271768 atttgcagggactaaaaccatattttagcc 37271739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 37272073 - 37272102
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  37272073 atttgcagggactaaaaccatattttagcc 37272102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 38639441 - 38639412
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  38639441 atttgcagggactaaaaccatattttagcc 38639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 38980224 - 38980253
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  38980224 atttgcagggactaaaaccatattttagcc 38980253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 40302004 - 40301975
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  40302004 atttgcagggactaaaaccatattttagcc 40301975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 40302310 - 40302339
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  40302310 atttgcagggactaaaaccatattttagcc 40302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 41693703 - 41693674
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41693703 atttgcagggactaaaaccatattttagcc 41693674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 43788887 - 43788858
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  43788887 atttgcagggactaaaaccatattttagcc 43788858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 44073778 - 44073807
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  44073778 atttgcagggactaaaaccatattttagcc 44073807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 3838235 - 3838263
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  3838235 atttgcagggactaaaaccatattttagc 3838263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 10374803 - 10374775
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  10374803 atttgcagggactaaaaccatattttagc 10374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 29311600 - 29311628
Alignment:
Q  225 tttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||    
T  29311600 tttgcagggactaaaaccatattttagcc 29311628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 42358843 - 42358871
Alignment:
Q  225 tttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||    
T  42358843 tttgcagggactaaaaccatattttagcc 42358871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 6345436 - 6345305
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6345436 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 6345337  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  6345336 caaaacaacatccaaaca-catccaaaaatatt 6345305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 31127226 - 31127357
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31127226 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 31127325  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  31127326 caaaacaacatccaaaca-catccaaaaatatt 31127357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 37948910 - 37949041
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37948910 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 37949009  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  37949010 caaaacaacatccaaaca-catccaaaaatatt 37949041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 256 - 400
Target Start/End: Complemental strand, 8211698 - 8211554
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||| |||||||    
T  8211698 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgttgcacctagaggattaaccaaaaaaacacattcatgatggt 8211599  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataaggaaaaaa 400  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  8211598 aatgtaattcgttgtcgaggaattcaaatgcatataaggaaaaaa 8211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 256 - 427
Target Start/End: Complemental strand, 9289942 - 9289769
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||        || |||| |||||||    
T  9289942 aaataaaattaacataagaactcatcaaagcataacttgcagatacaaactctaactgttgcacctagaggattaaccaaaaaaacatattcatgatggt 9289843  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataaggaaaaaa--cactataaaatacaacatctatgaagc 427  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||    
T  9289842 aatgtaattcgttgccgaggaattcaaatgcatataagaaaaaaaatcactataaaataaaacatctatgaagc 9289769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 43620004 - 43620145
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  43620004 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 43620103  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||    
T  43620104 gcggtttttccaaagcaacatccaaaca-catccaaaaatatt 43620145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 26721123 - 26721264
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||| ||||  ||||||||||||    
T  26721123 atactaataaaataataaataagtataaaaatttacttttgcggtttggtttggttcggttcggttttgaaaacgcaatccaaaataagatccgatcata 26721222  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  26721223 gcggtttttccaaaacaacatccaaaca-catccaaaaatatt 26721264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 1265246 - 1265121
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt----------ttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||          ||||||||||||||||||||||||||||||||||    
T  1265246 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggtttggttttgaaaacgcaatccgaaatccgatccgatcata 1265147  T
Q  103 gcggtttttccaaaacaatatccaaa 128  Q
    |||||||||||||||||| |||||||    
T  1265146 gcggtttttccaaaacaacatccaaa 1265121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 13471005 - 13470864
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||          |||||||||||| |||| |||||| ||||||||||| ||    
T  13471005 atactaataaaataataaataagcgtaaaaatttacttttgcggtttggtttggtttggttcggttttgaaaaggcaaaccgaaaaccgatccgatcgta 13470906  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    ||| |||||||||||||| ||||||||| ||||||||||||||    
T  13470905 gcgttttttccaaaacaacatccaaaca-catccaaaaatatt 13470864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 3106314 - 3106183
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||| |||||| ||||||| ||||| || |||||||||||||||||||||||||||||| || |  |||| ||||||||| ||||| |||| ||||||     
T  3106314 atacttataaaagaataaattagtattaatatttacttttgcggttcggttcggttttgagaaagtgatccaaaatccgatacgatcctagcagttttta 3106215  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||  ||||||||||||||    
T  3106214 caaaacaacatccaaac-gcatccaaaaatatt 3106183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 26721290 - 26721374
Alignment:
Q  60 ggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  26721290 ggttcggttttgaaaacgcaatccgaaatctgatttgatcatagcggtttttccaaaacaacgtccaaaca-catccaaaaatatt 26721374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 4602737 - 4602596
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt----------tgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||          |||||| |  ||||||||||||| || ||||||    
T  4602737 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggtttggttcggttttgaaaatgtgatccgaaatccgaaccaatcata 4602638  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||| | ||||||||||||    
T  4602637 gcggttttgccaaaacaacatccaaaca-cgtccaaaaatatt 4602596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 32906993 - 32906903
Alignment:
Q  54 cggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    ||||| |||||||||||||||| |  ||||||||||||| || |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  32906993 cggtttggttcggttttgaaaatgtgatccgaaatccgaaccaatcatagcggttttgccaaaacaacatccaaaca-catccaaaaatatt 32906903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 4267486 - 4267360
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcg----------gttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||||||||||          |||||||||| |  |||| ||||||||||||||| ||    
T  4267486 atactaataaaagaataaataagtattaatatttatttttgcggttcggttcggtttggttcggttttgaaaaggtgatccaaaatccgatccgatctta 4267387  T
Q  103 gcggtttttccaaaacaatatccaaac 129  Q
    ||||||||| ||||| || ||||||||    
T  4267386 gcggtttttacaaaataacatccaaac 4267360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 32907049 - 32906994
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt 68  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  32907049 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggtt 32906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 15266083 - 15265966
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||  ||||||||| ||||| |  |||| ||||  ||||||||   ||||||||||     
T  15266083 atactaataaaagaataaataggtattaaaatttacttttgcggtt-tgttcggtttggaaaatgtgatccaaaatttgatccgatatgagcggttttta 15265985  T
Q  113 caaaacaatatccaaacac 131  Q
    ||||||| ||| |||||||    
T  15265984 caaaacactattcaaacac 15265966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 42200050 - 42200174
Alignment:
Q  30 aataagtataaaaatttacttttgcggttcggttcggttt----------tgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaaca 119  Q
    ||||||||| || |||||||||||||||||||||||||||          ||| || |  ||||||||| ||||||||||||| ||||||||  ||||||    
T  42200050 aataagtattaatatttacttttgcggttcggttcggtttgatctggtattgagaaagtgatccgaaattcgatccgatcataacggtttttataaaaca 42200149  T
Q  120 atatccaaacaccatccaaaaatatt 145  Q
    | ||||||||| |||| |||||||||    
T  42200150 acatccaaaca-catctaaaaatatt 42200174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34191196 - 34191151
Alignment:
Q  18 aataaaataataaataagtataaaaatttacttttgcggttcggtt 63  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||    
T  34191196 aataaaataataaataagtattaatatttacttttgtggttcggtt 34191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 3773956 - 3773900
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||  ||||||||||||| || ||||| ||||||||||||||| |||||    
T  3773956 atactaataaaggaataaataagtattaatatttatttttgcggttcggtttggttt 3773900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 34903545 - 34903505
Alignment:
Q  222 taatttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  34903545 taatttgcagggactaaaaacatattttagccataaataaa 34903505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 40619725 - 40619768
Alignment:
Q  52 tgcggttcggttcggttttgaaaacgcaatccgaaatccgatcc 95  Q
    ||||||||||||||||||||||||  |||||| |||||||||||    
T  40619725 tgcggttcggttcggttttgaaaaatcaatccaaaatccgatcc 40619768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 1162938 - 1162908
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  1162938 atttgcagggactaaaaccatattttagcca 1162908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 4375721 - 4375691
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  4375721 atttgcagggactaaaaccatattttagcca 4375691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 7236450 - 7236388
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaa 75  Q
    ||||||| |||||||||||||||||| |||||||| ||||   |||| ||| |||||||||||    
T  7236450 atactaacaaaataataaataagtattaaaatttaattttatagttcagtttggttttgaaaa 7236388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 10776470 - 10776500
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  10776470 atttgcagggactaaaaccatattttagcca 10776500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 15719685 - 15719655
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  15719685 atttgcagggactaaaaccatattttagcca 15719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 16789340 - 16789370
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  16789340 atttgcagggactaaaaccatattttagcca 16789370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 28398785 - 28398755
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  28398785 atttgcagggactaaaaccatattttagcca 28398755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 33526081 - 33526051
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  33526081 atttgcagggactaaaaccatattttagcca 33526051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 40066791 - 40066821
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  40066791 atttgcagggactaaaaccatattttagcca 40066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 40844185 - 40844155
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  40844185 atttgcagggactaaaaccatattttagcca 40844155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 1408324 - 1408353
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1408324 atttgcagggactaaaaccatattttagcc 1408353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 1525838 - 1525809
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1525838 atttgcagggactaaaaccatattttagcc 1525809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 1526143 - 1526172
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1526143 atttgcagggactaaaaccatattttagcc 1526172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 4375981 - 4376010
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4375981 atttgcagggactaaaaccatattttagcc 4376010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 7272449 - 7272420
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  7272449 atttgcagggactaaaaccatattttagcc 7272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 10755499 - 10755528
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10755499 atttgcagggactaaaaccatattttagcc 10755528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14238780 - 14238751
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14238780 atttgcagggactaaaaccatattttagcc 14238751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 14239051 - 14239080
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14239051 atttgcagggactaaaaccatattttagcc 14239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14495098 - 14495069
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14495098 atttgcagggactaaaaccatattttagcc 14495069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 16643690 - 16643661
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16643690 atttgcagggactaaaaccatattttagcc 16643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 16644015 - 16644044
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16644015 atttgcagggactaaaaccatattttagcc 16644044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 16789104 - 16789075
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16789104 atttgcagggactaaaaccatattttagcc 16789075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18549230 - 18549201
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18549230 atttgcagggactaaaaccatattttagcc 18549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 19494148 - 19494119
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19494148 atttgcagggactaaaaccatattttagcc 19494119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 19494384 - 19494413
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19494384 atttgcagggactaaaaccatattttagcc 19494413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22650493 - 22650464
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22650493 atttgcagggactaaaaccatattttagcc 22650464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22917593 - 22917564
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22917593 atttgcagggactaaaaccatattttagcc 22917564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24954981 - 24955010
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24954981 atttgcagggactaaaaccatattttagcc 24955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 25131140 - 25131111
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  25131140 atttgcagggactaaaaccatattttagcc 25131111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 27341562 - 27341591
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  27341562 atttgcagggactaaaaccatattttagcc 27341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28581519 - 28581458
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaa 74  Q
    ||||||||||||||| ||||||| || |||||||||||||| |||  |||| | ||||||||    
T  28581519 atactaataaaataaaaaataaggattaaaatttacttttgtggtctggtttgattttgaaa 28581458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 29158383 - 29158354
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29158383 atttgcagggactaaaaccatattttagcc 29158354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29488081 - 29488110
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29488081 atttgcagggactaaaaccatattttagcc 29488110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 32418347 - 32418318
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32418347 atttgcagggactaaaaccatattttagcc 32418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 33636351 - 33636322
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  33636351 atttgcagggactaaaaccatattttagcc 33636322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 40066526 - 40066497
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  40066526 atttgcagggactaaaaccatattttagcc 40066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 43477192 - 43477163
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  43477192 atttgcagggactaaaaccatattttagcc 43477163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 4016934 - 4016906
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  4016934 atttgcagggactaaaaccatattttagc 4016906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 6146920 - 6146948
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  6146920 atttgcagggactaaaaccatattttagc 6146948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 10183199 - 10183255
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||| |||| ||||||||||||| || ||||||||||| |||| |||| |||||    
T  10183199 atactaagaaaagaataaataagtattaatatttacttttgtggttaggtttggttt 10183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 256 - 427
Target Start/End: Original strand, 13033 - 13208
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||        |||||||||||||||    
T  13033 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgttgcacctagatgattaacaaaaataacacattcgtgatggt 13132  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataagg----aaaaaacactataaaatacaacatctatgaagc 427  Q
    |||||||||| ||  ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||    
T  13133 aatgtaattcgtttccgaggaattcaaatgcatataaggaaaaaaaaaacactataaaatacaacatctatgaagc 13208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 3e-58; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 256 - 427
Target Start/End: Complemental strand, 51424129 - 51423956
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||| |||||||    
T  51424129 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgttgcacctagaggattaaccaaaaaaacacattcatgatggt 51424030  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataagg--aaaaaacactataaaatacaacatctatgaagc 427  Q
    |||||||||| ||  ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  51424029 aatgtaattcgttgccgaggaattcaaatgcatataaggaaaaaaaacactataaaataaaacatctatgaagc 51423956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 256 - 400
Target Start/End: Complemental strand, 11686100 - 11685956
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||||        ||||||| |||||||    
T  11686100 aaataaaattaacataagaaatcatcaaagcataacttgcatatacatactctaactcttgcacctagaggattaaccaaaaaaacacattcatgatggt 11686001  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataaggaaaaaa 400  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||    
T  11686000 aatgtaattcgttgccgaggaattcaaatgcatataaggaaaaaa 11685956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 37282612 - 37282737
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37282612 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 37282711  T
Q  103 gcggtttttccaaaacaatatccaaa 128  Q
    |||||||||||||||||| |||||||    
T  37282712 gcggtttttccaaaacaacatccaaa 37282737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 19636513 - 19636638
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||||||||     
T  19636513 atactaataaaataataaataagtataaaaatttacttttgcggttgggtttggttcggttcggttttgaaaactcaatccgaaatccgatccgatcatc 19636612  T
Q  103 gcggtttttccaaaacaatatccaaa 128  Q
    |||| ||||||||||||| |||||||    
T  19636613 gcggcttttccaaaacaacatccaaa 19636638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 32055836 - 32055977
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||          |||||||||||| |  ||||||||||||| || ||||||    
T  32055836 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcgatttggttcggttttgaaaatgtgatccgaaatccgaaccaatcata 32055935  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||    
T  32055936 gcggttttgccaaaacaacatccaaaca-catccaaaaatatt 32055977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 25706439 - 25706301
Alignment:
Q  17 taataaaataataaataagtataaaaatttacttttgcggttcggttcggttt----------tgaaaacgcaatccgaaatccgatccgatcatagcgg 106  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||||||          |||||| |  ||| ||| ||||| |||||||||||||    
T  25706439 taataaaataataaataagaattaaaatctacttttgcggttcggttcggtttggttcggttttgaaaaggttatctgaagtccgaaccgatcatagcgg 25706340  T
Q  107 t-ttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    | |||| |||||||| ||||||||| ||||||||||||||    
T  25706339 tttttttcaaaacaacatccaaaca-catccaaaaatatt 25706301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 29283137 - 29283081
Alignment:
Q  12 tatactaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt 68  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  29283137 tatactaataaaagaataaataagtattaatatttacttttgcggttcggttcggtt 29283081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 1030602 - 1030476
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttc----------ggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||||          |||||||||| ||||| |  |||| ||||||||||||||| ||    
T  1030602 atactaataaaagaataaataagtattaatatttatttttgcggttcagttcggtttggttcggtttcgaaaaagtgatccaaaatccgatccgatctta 1030503  T
Q  103 gcggtttttccaaaacaatatccaaac 129  Q
    ||||||||| |||||||| ||||||||    
T  1030502 gcggtttttacaaaacaacatccaaac 1030476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 48973707 - 48973762
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt 68  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  48973707 atactaatgaaataataaataagtataaaaatttacttttgcagttcggtttggtt 48973762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 39717244 - 39717312
Alignment:
Q  60 ggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaa 128  Q
    ||||||||||| |||| |  |||| |||||||| |||||||||||||||||||||| |||| |||||||    
T  39717244 ggttcggttttcaaaaggtgatccaaaatccgaaccgatcatagcggtttttccaatacaacatccaaa 39717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 48085299 - 48085390
Alignment:
Q  40 aaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacac 131  Q
    ||||| ||||||||||||| |||||||||||||||| |  ||||||||||||||  |||   | || ||||| |||||||| ||||||||||    
T  48085299 aaaatatacttttgcggtttggttcggttttgaaaaagtgatccgaaatccgatttgataccatcgctttttacaaaacaacatccaaacac 48085390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 19997516 - 19997460
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||| | ||||||||| ||| || ||||||||||||||||| |||||||||    
T  19997516 atactaataagagaataaataaatattaatatttacttttgcggttcagttcggttt 19997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 25710841 - 25710873
Alignment:
Q  224 atttgcagggactaaaaccatattttagccaga 256  Q
    |||||||||||||||||||||||||||||||||    
T  25710841 atttgcagggactaaaaccatattttagccaga 25710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 4513292 - 4513253
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  4513292 atttgcagggactaaaaccatattttagccttaaataaaa 4513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 8510243 - 8510213
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  8510243 atttgcagggactaaaaccatattttagcca 8510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 10792940 - 10792970
Alignment:
Q  223 aatttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||||    
T  10792940 aatttgcagggactaaaaccatattttagcc 10792970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 10977007 - 10976977
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  10977007 atttgcagggactaaaaccatattttagcca 10976977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 15016417 - 15016387
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  15016417 atttgcagggactaaaaccatattttagcca 15016387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 40169625 - 40169655
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  40169625 atttgcagggactaaaaccatattttagcca 40169655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 44802311 - 44802281
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  44802311 atttgcagggactaaaaccatattttagcca 44802281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 3151779 - 3151750
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3151779 atttgcagggactaaaaccatattttagcc 3151750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 3152082 - 3152111
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3152082 atttgcagggactaaaaccatattttagcc 3152111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 3830163 - 3830134
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3830163 atttgcagggactaaaaccatattttagcc 3830134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 3830487 - 3830516
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3830487 atttgcagggactaaaaccatattttagcc 3830516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 4814569 - 4814540
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4814569 atttgcagggactaaaaccatattttagcc 4814540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 4950066 - 4950037
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4950066 atttgcagggactaaaaccatattttagcc 4950037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 5345660 - 5345689
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5345660 atttgcagggactaaaaccatattttagcc 5345689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 13584338 - 13584367
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13584338 atttgcagggactaaaaccatattttagcc 13584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18175820 - 18175791
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18175820 atttgcagggactaaaaccatattttagcc 18175791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 20611049 - 20611020
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  20611049 atttgcagggactaaaaccatattttagcc 20611020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 20612869 - 20612898
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  20612869 atttgcagggactaaaaccatattttagcc 20612898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 21159482 - 21159453
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  21159482 atttgcagggactaaaaccatattttagcc 21159453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 21159788 - 21159817
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  21159788 atttgcagggactaaaaccatattttagcc 21159817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22008555 - 22008526
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22008555 atttgcagggactaaaaccatattttagcc 22008526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22016073 - 22016044
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22016073 atttgcagggactaaaaccatattttagcc 22016044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22155958 - 22155929
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22155958 atttgcagggactaaaaccatattttagcc 22155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 26800140 - 26800169
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26800140 atttgcagggactaaaaccatattttagcc 26800169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 28427579 - 28427608
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28427579 atttgcagggactaaaaccatattttagcc 28427608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 28942554 - 28942525
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28942554 atttgcagggactaaaaccatattttagcc 28942525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29446177 - 29446206
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29446177 atttgcagggactaaaaccatattttagcc 29446206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 29525134 - 29525105
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29525134 atttgcagggactaaaaccatattttagcc 29525105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 30130187 - 30130158
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  30130187 atttgcagggactaaaaccatattttagcc 30130158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 30424657 - 30424628
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  30424657 atttgcagggactaaaaccatattttagcc 30424628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 31869927 - 31869956
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  31869927 atttgcagggactaaaaccatattttagcc 31869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 34238627 - 34238598
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  34238627 atttgcagggactaaaaccatattttagcc 34238598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 37506896 - 37506867
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  37506896 atttgcagggactaaaaccatattttagcc 37506867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 37507193 - 37507222
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  37507193 atttgcagggactaaaaccatattttagcc 37507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 39288602 - 39288573
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39288602 atttgcagggactaaaaccatattttagcc 39288573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 39436747 - 39436718
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39436747 atttgcagggactaaaaccatattttagcc 39436718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 39437080 - 39437109
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39437080 atttgcagggactaaaaccatattttagcc 39437109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 44506611 - 44506582
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  44506611 atttgcagggactaaaaccatattttagcc 44506582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 51834637 - 51834608
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  51834637 atttgcagggactaaaaccatattttagcc 51834608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 51834913 - 51834942
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  51834913 atttgcagggactaaaaccatattttagcc 51834942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 53701634 - 53701663
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  53701634 atttgcagggactaaaaccatattttagcc 53701663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 3361789 - 3361817
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  3361789 atttgcagggactaaaaccatattttagc 3361817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 22156264 - 22156292
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  22156264 atttgcagggactaaaaccatattttagc 22156292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27167770 - 27167826
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||| ||||||| ||||| || | |||||||||||||||| || |||||    
T  27167770 atactaataaaagaataaatcagtattaataattacttttgcggttcgatttggttt 27167826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 49323811 - 49323779
Alignment:
Q  224 atttgcagggactaaaaccatattttagccaga 256  Q
    |||||||||||| ||||||||||||||||||||    
T  49323811 atttgcagggaccaaaaccatattttagccaga 49323779  T

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Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 27392722 - 27392591
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  27392722 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttt 27392623  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  27392622 caaaacaacatccaaaca-catccaaaaatatt 27392591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 1575984 - 1575843
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  1575984 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 1575885  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  1575884 gcggtttttccaaaacaacatccaaaca-catccaaaaatatt 1575843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 28694819 - 28694701
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  28694819 atactaataaaataatatataagtatgaaaatttactattgcggttcggtttggttttgaaaacgcaatccgaaatccaatccgatcatagcggtttttc 28694720  T
Q  113 caaaacaatatccaaacac 131  Q
    || ||||| ||||||||||    
T  28694719 cataacaacatccaaacac 28694701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 36482605 - 36482731
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||||     |||||||||||||  |||||||||| ||||||||||||||| ||||||||    
T  36482605 atactaataaaataataaataagtgtaaaaatttacttttgcggt-----tcggttttgaaaagacaatccgaaaaccgatccgatcatagtggtttttc 36482699  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
     ||||||| ||||||||| ||||||||||||||    
T  36482700 taaaacaacatccaaaca-catccaaaaatatt 36482731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 31280147 - 31280263
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||| |  |||| ||||||||||||||| || || |||||     
T  31280147 atactaataaaaaaataaataagtattaatatttatttttgcggttcggttcggttttgaaaaagtgatccaaaatccgatccgatcttaacgattttta 31280246  T
Q  113 caaaacaatatccaaac 129  Q
    |||||||| ||||||||    
T  31280247 caaaacaacatccaaac 31280263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 323570 - 323711
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||          |||||||||||| |  ||||||||||||| || ||||||    
T  323570 atactaataaaataataaataagaattaaaatctacttttgcggttcggttctgtttggttcggttttgaaaaggtgatccgaaatccgaaccaatcata 323669  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||    
T  323670 gcggttttgccaaaacaacatccaaaca-catccaaaaatatt 323711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 10286548 - 10286492
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  10286548 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggttt 10286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 36582534 - 36582604
Alignment:
Q  59 cggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaac 129  Q
    ||||||||||||||||| |  ||||||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  36582534 cggttcggttttgaaaaagtgatccgaaatccgatcagatcttagcggtttttacaaaacaacatccaaac 36582604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 6714228 - 6714317
Alignment:
Q  55 ggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||| ||||||| || |  || ||||||||||||||||| ||||||||||| ||||| || ||||||||| |||||||| |||||    
T  6714228 ggttcggttcagttttgagaaagtgattcgaaatccgatccgatcctagcggtttttacaaaataacatccaaaca-catccaaatatatt 6714317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 40303776 - 40303678
Alignment:
Q  23 aataataaataagta-taaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaa 120  Q
    ||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||    ||| ||||||| |||| ||| ||| ||||||| ||||||||    
T  40303776 aataataaataagcactaaaaatttacttttgcggttcgattcagttttgaaaaaatgatctgaaatccaatccaatcttagtggtttttacaaaacaa 40303678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 44508749 - 44508709
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaatt 265  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  44508749 atttgcagggactaaaaccatattttagcca-aaataaaatt 44508709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 16853560 - 16853600
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaat 264  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  16853560 atttgcagggaccaaaaccatattttagccaaaaataaaat 16853600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 29987961 - 29988087
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| |||||||||||||  | |||||||||||     || ||||||||||| || |  |||||||||| ||||  ||| ||   ||||||     
T  29987961 atactaataaaaaaataaataagtattcatatttacttttg-----cgattcggttttgagaaagtgatccgaaatctgatcgaatcctaatagttttta 29988055  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  29988056 caaaacaacatccaaaca-catccaaaaatatt 29988087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 48359046 - 48359086
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaat 264  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  48359046 atttgcagggactaaaaccatattttagccaaaactaaaat 48359086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 1006864 - 1006829
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaat 259  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1006864 atttgcagggactaaaaccatattttagccaaaaat 1006829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 1974038 - 1974008
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  1974038 atttgcagggactaaaaccatattttagcca 1974008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 7431980 - 7431950
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  7431980 atttgcagggactaaaaccatattttagcca 7431950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 13769803 - 13769773
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  13769803 atttgcagggactaaaaccatattttagcca 13769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 19561183 - 19561153
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  19561183 atttgcagggactaaaaccatattttagcca 19561153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 25547461 - 25547491
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  25547461 atttgcagggactaaaaccatattttagcca 25547491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 31732130 - 31732100
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  31732130 atttgcagggactaaaaccatattttagcca 31732100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 45021523 - 45021493
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  45021523 atttgcagggactaaaaccatattttagcca 45021493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 1559676 - 1559705
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1559676 atttgcagggactaaaaccatattttagcc 1559705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 6108363 - 6108334
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  6108363 atttgcagggactaaaaccatattttagcc 6108334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 6509237 - 6509208
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  6509237 atttgcagggactaaaaccatattttagcc 6509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 8555770 - 8555799
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  8555770 atttgcagggactaaaaccatattttagcc 8555799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 10286458 - 10286414
Alignment:
Q  100 atagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  10286458 atagcggttttgccaaaacaacatccaaaca-catccaaaaatatt 10286414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 12894373 - 12894402
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  12894373 atttgcagggactaaaaccatattttagcc 12894402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 13770052 - 13770081
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13770052 atttgcagggactaaaaccatattttagcc 13770081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 14738975 - 14739004
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14738975 atttgcagggactaaaaccatattttagcc 14739004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 17999494 - 17999465
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  17999494 atttgcagggactaaaaccatattttagcc 17999465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 17999692 - 17999721
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  17999692 atttgcagggactaaaaccatattttagcc 17999721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 19561421 - 19561450
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19561421 atttgcagggactaaaaccatattttagcc 19561450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 19757777 - 19757748
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19757777 atttgcagggactaaaaccatattttagcc 19757748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 20388303 - 20388274
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  20388303 atttgcagggactaaaaccatattttagcc 20388274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 21223719 - 21223748
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  21223719 atttgcagggactaaaaccatattttagcc 21223748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 21554724 - 21554753
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  21554724 atttgcagggactaaaaccatattttagcc 21554753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 23816699 - 23816670
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23816699 atttgcagggactaaaaccatattttagcc 23816670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 28911606 - 28911577
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28911606 atttgcagggactaaaaccatattttagcc 28911577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 28911877 - 28911906
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28911877 atttgcagggactaaaaccatattttagcc 28911906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 31310650 - 31310679
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  31310650 atttgcagggactaaaaccatattttagcc 31310679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 35015191 - 35015220
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35015191 atttgcagggactaaaaccatattttagcc 35015220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 35210486 - 35210515
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35210486 atttgcagggactaaaaccatattttagcc 35210515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 37372875 - 37372904
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  37372875 atttgcagggactaaaaccatattttagcc 37372904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 39719613 - 39719642
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39719613 atttgcagggactaaaaccatattttagcc 39719642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 39832935 - 39832906
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39832935 atttgcagggactaaaaccatattttagcc 39832906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 44344760 - 44344789
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  44344760 atttgcagggactaaaaccatattttagcc 44344789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 44402989 - 44402960
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  44402989 atttgcagggactaaaaccatattttagcc 44402960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 44509025 - 44509054
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  44509025 atttgcagggactaaaaccatattttagcc 44509054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 45021827 - 45021856
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45021827 atttgcagggactaaaaccatattttagcc 45021856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 45073343 - 45073314
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45073343 atttgcagggactaaaaccatattttagcc 45073314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 6079838 - 6079810
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  6079838 atttgcagggactaaaaccatattttagc 6079810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 18891536 - 18891576
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaat 264  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  18891536 atttgcagggactaaaaccatattttaaccaaaaaaaaaat 18891576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 35014956 - 35014928
Alignment:
Q  225 tttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||    
T  35014956 tttgcagggactaaaaccatattttagcc 35014928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 7e-53; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 256 - 427
Target Start/End: Original strand, 7055245 - 7055420
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnn-cacattcgtgatgg 354  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||         ||||||||||||||    
T  7055245 aaataaaattaacataagaactcatcaaagcataacttgaagatacatacgctaactgctgcacctagaggattaacaaaaaaaaacacattcgtgatgg 7055344  T
Q  355 taatgtaattcattctcgaggaattcaaatgcatataagg---aaaaaacactataaaatacaacatctatgaagc 427  Q
    ||||||||||| ||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  7055345 taatgtaattcgttcccgaggaattcaaatgcatataaggaaaaaaaaacactataaaatacaacatctatgaagc 7055420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 24575122 - 24575263
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  24575122 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 24575221  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  24575222 gcggtttttccaaaacaacatccaaaca-catccaaaaatatt 24575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 256 - 427
Target Start/End: Original strand, 14463066 - 14463239
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnn----cacattcgtga 351  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||            |||||||||||    
T  14463066 aaataaaattgacataagaactcatcaaagcataacttgcagatacat---ctaactgttgcacctagaggattaacaaaaaaaaaaaacacattcgtga 14463162  T
Q  352 tggtaatgtaattcattctcgaggaattcaaatgcatataagg-aaaaaacactataaaatacaacatctatgaagc 427  Q
    |||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  14463163 tggtaatgtaattcgttcccgaggaattcaaatgaatataaggaaaaaaacactataaaatacaacatctatgaagc 14463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 9280066 - 9279925
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  9280066 atactaataaaataataaataagtataaaaatttacttttgcggttaggttaggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 9279967  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  9279966 gcggtttttccaaaacaacatccaaaca-aatccaaaaatatt 9279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 46251898 - 46252029
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |  ||||||||||||| || |||||||||| |||||    
T  46251898 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggttttgaaaaggtgatccgaaatccgaaccaatcatagcggcttttc 46251997  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  46251998 caaaacaacatccaaaca-catccaaaaatatt 46252029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 7700422 - 7700297
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||          |||||| ||||||||||||||||| ||||| |||||||||||||    
T  7700422 atactaataaaataataaataagtataaaaatttacttttgtggtttggtttggttcggttcagttttgaaaacgcaatctgaaattcgatccgatcata 7700323  T
Q  103 gcggtttttccaaaacaatatccaaa 128  Q
    |||||||||| ||||||| |||||||    
T  7700322 gcggtttttctaaaacaacatccaaa 7700297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 34277079 - 34276963
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||||||||| |  ||||  ||| |||||||||| |||||||||||     
T  34277079 atactaataaaagaataaataagtattaatatttatttttgcggttcggttcgattttgaaaaagtgatccagaattcgatccgatcttagcggttttta 34276980  T
Q  113 caaaacaatatccaaac 129  Q
    |||||||| ||||||||    
T  34276979 caaaacaacatccaaac 34276963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 47498805 - 47498946
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggt----------tcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||          ||||||||||||| |||| |  ||||||||||||| || ||||||    
T  47498805 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggttcggttcggttttaaaaaggtgatccgaaatccgaaccaatcata 47498904  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  47498905 gcggtttttccaaaacaacatccaaaca-catccaaaaatatt 47498946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 18780894 - 18781035
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcg----------gttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||| ||   ||||||||||| ||| ||||||| |||| |||||||    
T  18780894 atactaataaaataataaataagtataaaaatttacttttgcggtttagtttagttcgattttattttgaaaacgtaattcgaaatctgatctgatcata 18780993  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
     ||||||||||||||||| || |||||| ||||||||||||||    
T  18780994 acggtttttccaaaacaaaattcaaaca-catccaaaaatatt 18781035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 40436573 - 40436458
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||| ||| || ||||||||||||||||||||| ||||||||||| |  ||||||| ||||||| |||| || |  |||||     
T  40436573 atactaataaaagaataaataaatattaatatttacttttgcggttcggtttggttttgaaaaagtgatccgaagtccgatctgatcgtaacaattttta 40436474  T
Q  113 caaaacaatatccaaa 128  Q
    |||||||| |||||||    
T  40436473 caaaacaacatccaaa 40436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 56078568 - 56078452
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||| |||||||||||| |||||||||||||| ||||  ||||||||||||||| |  ||  ||||||||||||||||| | |  |||||     
T  56078568 atactaataaaatgataaataagtattaaaatttacttttgtggttttgttcggttttgaaaaagtgatttgaaatccgatccgatcacaacaattttta 56078469  T
Q  113 caaaacaatatccaaac 129  Q
    | |||||| ||||||||    
T  56078468 ctaaacaacatccaaac 56078452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 42414514 - 42414640
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||||||||          |||||||||||| |  |||| ||||||||||||||| ||    
T  42414514 atactaataaaagaataaataagtattaatatttatttttgcggttcggttcggtttggttcggttttgaaaaagtgatccaaaatccgatccgatctta 42414613  T
Q  103 gcggtttttccaaaacaatatccaaac 129  Q
    ||||||||| |||||||| ||||||||    
T  42414614 gcggtttttacaaaacaacatccaaac 42414640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 42430122 - 42430004
Alignment:
Q  16 ctaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt-----tgaaaacgcaatccgaaatccgatccgatcatagcggtttt 110  Q
    ||||||||| ||||||||||||| || ||||| ||||||| ||||||| |||||     |||||| |  ||||||||| ||||||||||  |||||||||    
T  42430122 ctaataaaagaataaataagtattaatatttatttttgcgtttcggtttggtttggttttgaaaaagtgatccgaaattcgatccgatctgagcggtttt 42430023  T
Q  111 tccaaaacaatatccaaac 129  Q
    | |||||||| ||||||||    
T  42430022 tacaaaacaacatccaaac 42430004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 31568102 - 31568221
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcgg-----ttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggt 107  Q
    |||||||||||| | ||||||||||| || ||||||||||||||     ||||||| |||||||||||    ||  ||||||||||||| || |||||||    
T  31568102 atactaataaaagagtaaataagtattaatatttacttttgcggttcaattcggtttggttttgaaaaaatgatatgaaatccgatccggtcttagcggt 31568201  T
Q  108 ttttccaaaacaatatccaa 127  Q
    |||| |||||||| ||||||    
T  31568202 ttttacaaaacaacatccaa 31568221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 3757053 - 3756978
Alignment:
Q  54 cggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaac 129  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||| || ||||||||  ||||||| || |||||    
T  3757053 cggtttggttcggttttgaaaaagtgatccgaaatccgatccgatcttaacggtttttaaaaaacaacattcaaac 3756978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 31938711 - 31938653
Alignment:
Q  17 taataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaa 75  Q
    |||||||| ||||||||||||| ||||||||| |||| |||| |||||| |||||||||    
T  31938711 taataaaagaataaataagtattaaaatttacatttgtggtttggttcgattttgaaaa 31938653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 20580728 - 20580592
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttg-----cggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggt 107  Q
    |||||||||||| ||||||||||||| || |||| ||||||     ||||| |||| ||||||||||| |  ||| |||||||||||||||| ||||  |    
T  20580728 atactaataaaagaataaataagtattaatatttgcttttgttgttcggtttggtttggttttgaaaaagtgatctgaaatccgatccgatcctagcaat 20580629  T
Q  108 ttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    | || |||||||| || ||| |  ||||||||||||||    
T  20580628 tcttacaaaacaacattcaagc-gcatccaaaaatatt 20580592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 47997031 - 47997095
Alignment:
Q  80 atccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||||| ||||||||||| |||||||| || ||| || |||| |||||||||    
T  47997031 atccgaaatccgatccgatcctagcggtttttacaaaacaacattcaagca-catcgaaaaatatt 47997095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 50714269 - 50714232
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataa 261  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  50714269 atttgcagggactaaaaccatattttagccaaaaataa 50714232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 35415604 - 35415640
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaata 260  Q
    ||||||||||||||||||||||||||||||| |||||    
T  35415604 atttgcagggactaaaaccatattttagccaaaaata 35415640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 22099572 - 22099537
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaat 259  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22099572 atttgcagggactaaaaccatattttagccataaat 22099537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 24859100 - 24859057
Alignment:
Q  52 tgcggttcggttcggttttgaaaacgcaatccgaaatccgatcc 95  Q
    ||||||||||||||||||||||||  |||||| |||||||||||    
T  24859100 tgcggttcggttcggttttgaaaaatcaatccaaaatccgatcc 24859057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 46292421 - 46292382
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  46292421 atttgcagggaccaaaaccatattttagccataaataaaa 46292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 6184090 - 6184152
Alignment:
Q  66 gttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaa 128  Q
    |||||||||| |  |||||||||||||||||||| || || ||||| |||||||| |||||||    
T  6184090 gttttgaaaaagtgatccgaaatccgatccgatcctaacgatttttacaaaacaacatccaaa 6184152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 8191362 - 8191392
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  8191362 atttgcagggactaaaaccatattttagcca 8191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 50714536 - 50714566
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  50714536 atttgcagggactaaaaccatattttagcca 50714566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 53717145 - 53717175
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  53717145 atttgcagggactaaaaccatattttagcca 53717175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 123563 - 123534
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  123563 atttgcagggactaaaaccatattttagcc 123534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2180249 - 2180220
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2180249 atttgcagggactaaaaccatattttagcc 2180220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 9289295 - 9289266
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  9289295 atttgcagggactaaaaccatattttagcc 9289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 13064188 - 13064159
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13064188 atttgcagggactaaaaccatattttagcc 13064159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 13064436 - 13064465
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13064436 atttgcagggactaaaaccatattttagcc 13064465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 13479582 - 13479611
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13479582 atttgcagggactaaaaccatattttagcc 13479611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 16712662 - 16712691
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16712662 atttgcagggactaaaaccatattttagcc 16712691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18205185 - 18205156
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18205185 atttgcagggactaaaaccatattttagcc 18205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 22099883 - 22099912
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22099883 atttgcagggactaaaaccatattttagcc 22099912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 23778993 - 23778964
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23778993 atttgcagggactaaaaccatattttagcc 23778964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24474934 - 24474963
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24474934 atttgcagggactaaaaccatattttagcc 24474963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 28809040 - 28808999
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaatt 265  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||    
T  28809040 atttgcaaggactaaaaccatattttagccaaaaaaaaaatt 28808999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 28809151 - 28809180
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28809151 atttgcagggactaaaaccatattttagcc 28809180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29380881 - 29380910
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29380881 atttgcagggactaaaaccatattttagcc 29380910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29463884 - 29463913
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29463884 atttgcagggactaaaaccatattttagcc 29463913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 32208571 - 32208542
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32208571 atttgcagggactaaaaccatattttagcc 32208542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 32365123 - 32365094
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32365123 atttgcagggactaaaaccatattttagcc 32365094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 32365454 - 32365483
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32365454 atttgcagggactaaaaccatattttagcc 32365483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 34361832 - 34361803
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  34361832 atttgcagggactaaaaccatattttagcc 34361803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 35763676 - 35763647
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35763676 atttgcagggactaaaaccatattttagcc 35763647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 36702029 - 36702000
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  36702029 atttgcagggactaaaaccatattttagcc 36702000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 41345882 - 41345853
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41345882 atttgcagggactaaaaccatattttagcc 41345853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 41346189 - 41346218
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41346189 atttgcagggactaaaaccatattttagcc 41346218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 45474567 - 45474596
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45474567 atttgcagggactaaaaccatattttagcc 45474596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 45505629 - 45505600
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45505629 atttgcagggactaaaaccatattttagcc 45505600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 45505865 - 45505894
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45505865 atttgcagggactaaaaccatattttagcc 45505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 46088031 - 46088060
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  46088031 atttgcagggactaaaaccatattttagcc 46088060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 46115750 - 46115779
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  46115750 atttgcagggactaaaaccatattttagcc 46115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 46128884 - 46128913
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  46128884 atttgcagggactaaaaccatattttagcc 46128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 46292622 - 46292651
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  46292622 atttgcagggactaaaaccatattttagcc 46292651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 51545658 - 51545629
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  51545658 atttgcagggactaaaaccatattttagcc 51545629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 51708722 - 51708693
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  51708722 atttgcagggactaaaaccatattttagcc 51708693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 51708998 - 51709027
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  51708998 atttgcagggactaaaaccatattttagcc 51709027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 52017534 - 52017505
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  52017534 atttgcagggactaaaaccatattttagcc 52017505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 52017841 - 52017870
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  52017841 atttgcagggactaaaaccatattttagcc 52017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 52430071 - 52430100
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  52430071 atttgcagggactaaaaccatattttagcc 52430100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 52441792 - 52441763
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  52441792 atttgcagggactaaaaccatattttagcc 52441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 53716950 - 53716921
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  53716950 atttgcagggactaaaaccatattttagcc 53716921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 55072418 - 55072389
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  55072418 atttgcagggactaaaaccatattttagcc 55072389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 13479301 - 13479273
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  13479301 atttgcagggactaaaaccatattttagc 13479273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 24319179 - 24319123
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttac-ttttgcggttcggttcggtt 68  Q
    |||||||||||| ||||||||||||| || |||||| ||||| ||||||||| ||||    
T  24319179 atactaataaaagaataaataagtattaatatttactttttgtggttcggtttggtt 24319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26161365 - 26161421
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||||||||||||||||| || ||||| ||||  ||||| ||| |||||    
T  26161365 atactaataaaataataaataagtattaatatttatttttctggttcagtttggttt 26161421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 26412555 - 26412591
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaata 260  Q
    |||||||||||| |||||||||||||||||| |||||    
T  26412555 atttgcagggaccaaaaccatattttagccaaaaata 26412591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 47310142 - 47310086
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||| |||| ||||||||||||| || |||||||||||| ||| | ||||||||    
T  47310142 atactaagaaaagaataaataagtattaatatttacttttgcagtttgattcggttt 47310086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 5559524 - 5559393
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  5559524 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttttgaaaatgcaatccgaaatctgatccgatcatggcggtttttc 5559425  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  5559424 caaaacaacatccaaaca-catccaaaaatatt 5559393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 14461842 - 14461716
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||    
T  14461842 atactaataaaataataaataagaataaaaatttacttttgcggttcggtt-----ttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 14461748  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  14461747 caaaacaacatccaaaca-catccaaaaatatt 14461716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 41198477 - 41198613
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt-----ttgaaaacgcaatccgaaatccgatccgatcatagcggt 107  Q
    |||||||||||| ||||||||||| | || ||||| ||||||||||||||| ||||     ||| ||| |  |||||||||||||||||||| |||||||    
T  41198477 atactaataaaagaataaataagttttaatatttatttttgcggttcggtttggttcagttttggaaaagtgatccgaaatccgatccgatcttagcggt 41198576  T
Q  108 ttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||| |||||||| |||||| || |||||||| |||||    
T  41198577 ttttacaaaacaacatccaatca-catccaaatatatt 41198613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 33719567 - 33719698
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| |||||||||||||  | ||||||||||| ||||| |||| |||||||||| |  ||| |||||  ||| ||||| |||| ||||||     
T  33719567 atactaataaaagaataaataagtattcatatttacttttgtggttcagttcagttttgaaaaagtgatctgaaatttgattcgatcctagcagttttta 33719666  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||  ||||||||||||||    
T  33719667 caaaacaacatccaaac-gcatccaaaaatatt 33719698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 28655711 - 28655593
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||||||| || |||||||| ||| |||||||| |||||||| || |  ||| ||||| |||||||||| ||  | |||||     
T  28655711 atactaataaaagaataaataagtattaacatttacttatgcagttcggtttggttttgagaaagtgatctgaaattcgatccgatcctattgattttta 28655612  T
Q  113 caaaacaatatccaaacac 131  Q
    |||||||| ||||||||||    
T  28655611 caaaacaacatccaaacac 28655593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 24063941 - 24064007
Alignment:
Q  65 ggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacac 131  Q
    ||||||||||| |  |||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  24063941 ggttttgaaaaagtgatccgaaatccgatccaatcatagcggtttttccaaaacaacatccatacac 24064007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 24614884 - 24614828
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||    
T  24614884 atactaataaaagaataaataagtattaatatttatttttgcggttcggttcggttt 24614828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 41074993 - 41074903
Alignment:
Q  54 cggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||| ||||||||| | |  ||||||||| | ||| || ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  41074993 cggttcggtttggttttgaagaggtgatccgaaattcaatctgaccatagcggttttttcaaaacaacatccaaaca-catccaaaaatatt 41074903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 31092025 - 31092081
Alignment:
Q  7 tagattatactaataaaataataaataagtataaaaatttacttttgcggttcggtt 63  Q
    ||||| |||||||||||| ||||||||||||| || ||||||||||| |||||||||    
T  31092025 tagataatactaataaaagaataaataagtattaatatttacttttgtggttcggtt 31092081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 52254450 - 52254488
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  52254450 atttgcagggactaaaaccatattttagccaaaaataaa 52254488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 16902708 - 16902572
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt-----cggttttgaaaacgcaatccgaaatccgatccgatcatagcggt 107  Q
    |||||||||||||||||||||| | | |||| ||| |||||||||||||||     |||||||||||| |  |||| ||||   ||| |||| | || ||    
T  16902708 atactaataaaataataaataatttttaaaaattatttttgcggttcggtttggttcggttttgaaaaagtgatccaaaatttaatctgatccttgcagt 16902609  T
Q  108 ttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||| |||||||| ||||||||| |||| |||||||||    
T  16902608 ttttgcaaaacaacatccaaaca-catctaaaaatatt 16902572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 11956332 - 11956375
Alignment:
Q  52 tgcggttcggttcggttttgaaaacgcaatccgaaatccgatcc 95  Q
    ||||||||||||||||||||||||  |||||| |||||||||||    
T  11956332 tgcggttcggttcggttttgaaaaatcaatccaaaatccgatcc 11956375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 7001868 - 7001898
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  7001868 atttgcagggactaaaaccatattttagcca 7001898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 12361041 - 12361011
Alignment:
Q  223 aatttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||||    
T  12361041 aatttgcagggactaaaaccatattttagcc 12361011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 21391125 - 21391087
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  21391125 atttgcagggactaaaaccatattttagcctaaaataaa 21391087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 22953527 - 22953557
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  22953527 atttgcagggactaaaaccatattttagcca 22953557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 24649379 - 24649349
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  24649379 atttgcagggactaaaaccatattttagcca 24649349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 26191388 - 26191358
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  26191388 atttgcagggactaaaaccatattttagcca 26191358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 26191705 - 26191735
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  26191705 atttgcagggactaaaaccatattttagcca 26191735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 29072833 - 29072863
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  29072833 atttgcagggactaaaaccatattttagcca 29072863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 35308082 - 35308112
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  35308082 atttgcagggactaaaaccatattttagcca 35308112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 44641403 - 44641441
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  44641403 atttgcagggactaaaatcatattttagccataaataaa 44641441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 48956037 - 48956067
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  48956037 atttgcagggactaaaaccatattttagcca 48956067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 990350 - 990379
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  990350 atttgcagggactaaaaccatattttagcc 990379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 1810956 - 1810927
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1810956 atttgcagggactaaaaccatattttagcc 1810927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 4360597 - 4360626
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4360597 atttgcagggactaaaaccatattttagcc 4360626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 6567467 - 6567496
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  6567467 atttgcagggactaaaaccatattttagcc 6567496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 11822033 - 11822004
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  11822033 atttgcagggactaaaaccatattttagcc 11822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 11822336 - 11822365
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  11822336 atttgcagggactaaaaccatattttagcc 11822365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 13260292 - 13260321
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13260292 atttgcagggactaaaaccatattttagcc 13260321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 13770518 - 13770489
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  13770518 atttgcagggactaaaaccatattttagcc 13770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14007518 - 14007489
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14007518 atttgcagggactaaaaccatattttagcc 14007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 18079631 - 18079660
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18079631 atttgcagggactaaaaccatattttagcc 18079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 18302358 - 18302387
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18302358 atttgcagggactaaaaccatattttagcc 18302387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18473301 - 18473272
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18473301 atttgcagggactaaaaccatattttagcc 18473272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 18473566 - 18473595
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18473566 atttgcagggactaaaaccatattttagcc 18473595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 19622684 - 19622655
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  19622684 atttgcagggactaaaaccatattttagcc 19622655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 22919713 - 22919684
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22919713 atttgcagggactaaaaccatattttagcc 22919684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 26061985 - 26061956
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26061985 atttgcagggactaaaaccatattttagcc 26061956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 26442592 - 26442563
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26442592 atttgcagggactaaaaccatattttagcc 26442563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 26796093 - 26796057
Alignment:
Q  232 ggactaaaaccatattttagccagaaataaaattaaca 269  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26796093 ggactaaaaccatattttagcca-aaataaaattaaca 26796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 29072526 - 29072497
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29072526 atttgcagggactaaaaccatattttagcc 29072497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 32454265 - 32454294
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32454265 atttgcagggactaaaaccatattttagcc 32454294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 32626558 - 32626529
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32626558 atttgcagggactaaaaccatattttagcc 32626529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 32729020 - 32729049
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  32729020 atttgcagggactaaaaccatattttagcc 32729049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 33379917 - 33379888
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  33379917 atttgcagggactaaaaccatattttagcc 33379888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 34002911 - 34002940
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  34002911 atttgcagggactaaaaccatattttagcc 34002940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 35005473 - 35005444
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35005473 atttgcagggactaaaaccatattttagcc 35005444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 35005715 - 35005744
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35005715 atttgcagggactaaaaccatattttagcc 35005744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 35307744 - 35307715
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35307744 atttgcagggactaaaaccatattttagcc 35307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 41358398 - 41358369
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41358398 atttgcagggactaaaaccatattttagcc 41358369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 41358634 - 41358663
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41358634 atttgcagggactaaaaccatattttagcc 41358663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 41739091 - 41739120
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  41739091 atttgcagggactaaaaccatattttagcc 41739120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 45290486 - 45290457
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45290486 atttgcagggactaaaaccatattttagcc 45290457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 45368519 - 45368490
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  45368519 atttgcagggactaaaaccatattttagcc 45368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 48609565 - 48609594
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  48609565 atttgcagggactaaaaccatattttagcc 48609594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 50799159 - 50799130
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  50799159 atttgcagggactaaaaccatattttagcc 50799130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 3753242 - 3753214
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  3753242 atttgcagggactaaaaccatattttagc 3753214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 4323857 - 4323829
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  4323857 atttgcagggactaaaaccatattttagc 4323829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 27521605 - 27521577
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  27521605 atttgcagggactaaaaccatattttagc 27521577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 34382976 - 34382948
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  34382976 atttgcagggactaaaaccatattttagc 34382948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 41881318 - 41881346
Alignment:
Q  225 tttgcagggactaaaaccatattttagcc 253  Q
    |||||||||||||||||||||||||||||    
T  41881318 tttgcagggactaaaaccatattttagcc 41881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 44641107 - 44641079
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  44641107 atttgcagggactaaaaccatattttagc 44641079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 40987481 - 40987340
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  40987481 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 40987382  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  40987381 gcggtttttccaaaacaacatccaaaca-catccaaaaatatt 40987340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 13521622 - 13521491
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||   ||||||||||| |||    
T  13521622 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaatgcaatttgaaatccgatctagtcatagcggttattc 13521523  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||| ||||| ||||||||||||||    
T  13521522 caaaacaacatctaaaca-catccaaaaatatt 13521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 27110786 - 27110655
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||| ||| |  ||||  |||||||||||||| |||||||||||     
T  27110786 atactaataaaagaataaataagtattaatatttatttttgcggttcggttcggttttggaaaagtgatccagaatccgatccgatcttagcggttttta 27110687  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| |||||||| |||||    
T  27110686 caaaacaacatccaaaca-catccaaatatatt 27110655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 13554909 - 13554768
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcgg----------ttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||| |||||||||||||||||||   |||||||          |||||||||||||| ||||| ||||||||||||  || |||    
T  13554909 atactaataaaataataaacaagtataaaaatttactttcatggttcggcttggtttggttcggttttgaaaatgcaattcgaaatccgatctaattata 13554810  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| |||| |||||||||    
T  13554809 gcggtttttccaaaacaacatccaaaca-catctaaaaatatt 13554768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 41061304 - 41061218
Alignment:
Q  43 atttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaac 129  Q
    ||||| ||||||| ||||||||||||||||||| | ||||| ||||||| ||||||| ||||||||||| |||||||||||||||||    
T  41061304 atttatttttgcgtttcggttcggttttgaaaaagtaatccaaaatccgttccgatcttagcggtttttacaaaacaatatccaaac 41061218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 33160659 - 33160518
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcgg----------ttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||          ||||||||| |  ||||||||||||| | |||||||    
T  33160659 atactaataaaataataaataagaattaaaatctacttttgcggttcggttcggtttggttcgattttgaaaaggtgatccgaaatccgaactgatcata 33160560  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
     | |||||||||||||||  |||||||| ||||||||||||||    
T  33160559 acagtttttccaaaacaacctccaaaca-catccaaaaatatt 33160518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 1495912 - 1495994
Alignment:
Q  62 ttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||| |  |||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||    
T  1495912 ttcggttttgaaaaggtgatccgaaacccgatccgatcttagcggtttttacaaaacaatatccaaaca-catccaaatatatt 1495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 14718304 - 14718254
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt 63  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  14718304 atactaataaaagaataaataagtattaatatttacttttgcggttcggtt 14718254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 10415905 - 10415846
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttga 72  Q
    |||||||||||| ||||||||||||| || || |||||||| ||||||| ||||||||||    
T  10415905 atactaataaaagaataaataagtattaagatgtacttttgtggttcggatcggttttga 10415846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 42716110 - 42716209
Alignment:
Q  30 aataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaac 129  Q
    ||||||||| ||||| || |||||||||| ||||| |||||||||| | |||||||||||  |  ||||| ||||  ||||| |||||||| ||||||||    
T  42716110 aataagtattaaaatatatttttgcggtttggttcagttttgaaaaagtaatccgaaatctaaatcgatcctagctttttttacaaaacaacatccaaac 42716209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 42994097 - 42994058
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  42994097 atttgcagggactaaaaccatattttagccaaaaataaaa 42994058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 29501331 - 29501377
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttc 59  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||    
T  29501331 atactaataaaataataaataaacattaaaatttacttttgcggttc 29501377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 12291328 - 12291384
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||| ||||||||||||| || |||||||||| |||||| |||| ||||    
T  12291328 atactaataaaagaataaataagtattaatatttacttttacggttcagttcagttt 12291384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 26133212 - 26133172
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaat 264  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  26133212 atttgtagggactaaaaccatattttagccataaataaaat 26133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 3850328 - 3850293
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaat 259  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3850328 atttgcagggactaaaaccatattttagccaaaaat 3850293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 6118470 - 6118505
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaat 259  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6118470 atttgcagggactaaaaccatattttagccaaaaat 6118505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 18633932 - 18633978
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaattaacata 271  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  18633932 atttgcagggactaaaaccatattttagcca-aaatgaaattaccata 18633978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 28863809 - 28863844
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaat 259  Q
    ||||||||||||||||||||||||||||||| ||||    
T  28863809 atttgcagggactaaaaccatattttagccaaaaat 28863844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 21050884 - 21050914
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  21050884 atttgcagggactaaaaccatattttagcca 21050914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 25561734 - 25561704
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  25561734 atttgcagggactaaaaccatattttagcca 25561704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 28550856 - 28550826
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  28550856 atttgcagggactaaaaccatattttagcca 28550826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 29366920 - 29366950
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  29366920 atttgcagggactaaaaccatattttagcca 29366950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 33335997 - 33336027
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  33335997 atttgcagggactaaaaccatattttagcca 33336027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 40029468 - 40029498
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  40029468 atttgcagggactaaaaccatattttagcca 40029498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 293857 - 293828
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  293857 atttgcagggactaaaaccatattttagcc 293828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2217523 - 2217494
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2217523 atttgcagggactaaaaccatattttagcc 2217494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 2217825 - 2217854
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2217825 atttgcagggactaaaaccatattttagcc 2217854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 4203485 - 4203456
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4203485 atttgcagggactaaaaccatattttagcc 4203456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 4203741 - 4203770
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  4203741 atttgcagggactaaaaccatattttagcc 4203770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 5614195 - 5614166
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5614195 atttgcagggactaaaaccatattttagcc 5614166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 5614501 - 5614530
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5614501 atttgcagggactaaaaccatattttagcc 5614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 5950205 - 5950176
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5950205 atttgcagggactaaaaccatattttagcc 5950176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 7075601 - 7075572
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  7075601 atttgcagggactaaaaccatattttagcc 7075572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 10408957 - 10408928
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10408957 atttgcagggactaaaaccatattttagcc 10408928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 10409297 - 10409326
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10409297 atttgcagggactaaaaccatattttagcc 10409326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 10743753 - 10743724
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10743753 atttgcagggactaaaaccatattttagcc 10743724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 11799158 - 11799129
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  11799158 atttgcagggactaaaaccatattttagcc 11799129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 16038406 - 16038377
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  16038406 atttgcagggactaaaaccatattttagcc 16038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18046067 - 18046038
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18046067 atttgcagggactaaaaccatattttagcc 18046038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 18046319 - 18046348
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18046319 atttgcagggactaaaaccatattttagcc 18046348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 18633628 - 18633599
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  18633628 atttgcagggactaaaaccatattttagcc 18633599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 23381979 - 23381950
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23381979 atttgcagggactaaaaccatattttagcc 23381950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 23382268 - 23382297
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23382268 atttgcagggactaaaaccatattttagcc 23382297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 25561970 - 25561999
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  25561970 atttgcagggactaaaaccatattttagcc 25561999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 25779133 - 25779162
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  25779133 atttgcagggactaaaaccatattttagcc 25779162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 26133384 - 26133413
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  26133384 atttgcagggactaaaaccatattttagcc 26133413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 28863539 - 28863510
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  28863539 atttgcagggactaaaaccatattttagcc 28863510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29172857 - 29172886
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29172857 atttgcagggactaaaaccatattttagcc 29172886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 29692773 - 29692744
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29692773 atttgcagggactaaaaccatattttagcc 29692744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29875696 - 29875725
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  29875696 atttgcagggactaaaaccatattttagcc 29875725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 30800523 - 30800494
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  30800523 atttgcagggactaaaaccatattttagcc 30800494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 30800821 - 30800850
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  30800821 atttgcagggactaaaaccatattttagcc 30800850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 31037712 - 31037741
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  31037712 atttgcagggactaaaaccatattttagcc 31037741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 35165965 - 35165936
Alignment:
Q  225 tttgcagggactaaaaccatattttagcca 254  Q
    ||||||||||||||||||||||||||||||    
T  35165965 tttgcagggactaaaaccatattttagcca 35165936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 35166940 - 35166911
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35166940 atttgcagggactaaaaccatattttagcc 35166911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 35167136 - 35167165
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  35167136 atttgcagggactaaaaccatattttagcc 35167165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 36577751 - 36577722
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  36577751 atttgcagggactaaaaccatattttagcc 36577722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 36578054 - 36578083
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  36578054 atttgcagggactaaaaccatattttagcc 36578083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 38496753 - 38496782
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  38496753 atttgcagggactaaaaccatattttagcc 38496782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 38786188 - 38786159
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  38786188 atttgcagggactaaaaccatattttagcc 38786159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 39379581 - 39379610
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  39379581 atttgcagggactaaaaccatattttagcc 39379610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 29172552 - 29172524
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  29172552 atttgcagggactaaaaccatattttagc 29172524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 35449612 - 35449668
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    |||||||||||| |||||||| |||| || ||||| |||||||||| ||| ||||||    
T  35449612 atactaataaaagaataaataggtattaatatttatttttgcggttaggtacggttt 35449668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 41061366 - 41061322
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggt 57  Q
    |||||||||||| ||||||||||||| || ||||| |||||||||    
T  41061366 atactaataaaagaataaataagtattaatatttatttttgcggt 41061322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 16705332 - 16705456
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  16705332 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgc-------aatccgatccgatcatagcggtttttc 16705424  T
Q  113 caaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||| ||||||||| ||||||||||||||    
T  16705425 caaaacaacatccaaaca-catccaaaaatatt 16705456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 7608247 - 7608388
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggtt----------cggttcggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  7608247 atactaataaaataataaataagtataaaaatttacttttgcggttcggtttggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcata 7608346  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  7608347 gcggtttttccaaaacaacatccaaaca-aatccaaaaatatt 7608388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 256 - 400
Target Start/End: Complemental strand, 24999030 - 24998886
Alignment:
Q  256 aaataaaattaacataagaactcatcaaagcataacttgcagatacatactctaactgtcgcacctagaggattaacnnnnnnnncacattcgtgatggt 355  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||        ||||||| |||||||    
T  24999030 aaataaaattaacataagaactcttcaaagcataacttgcatatatatactctaactgttgcacatagaggattaaccaaaaaagcacattcatgatggt 24998931  T
Q  356 aatgtaattcattctcgaggaattcaaatgcatataaggaaaaaa 400  Q
    ||| |||||  |||   |||| ||||||||||||||||| |||||    
T  24998930 aatataatttgttcctaaggagttcaaatgcatataagggaaaaa 24998886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 21946851 - 21946710
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggtt----------cggttttgaaaacgcaatccgaaatccgatccgatcata 102  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||          ||||||||||||    ||||||||||||| || || |||    
T  21946851 atactaataaaataataaataagaattaaaatctacttttgcggttcggtttggtttggttcggttttgaaaagctgatccgaaatccgaaccaattata 21946752  T
Q  103 gcggtttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||||||||||||||||| ||||||||| |||| |||||||||    
T  21946751 gcggtttttccaaaacaacatccaaaca-catcaaaaaatatt 21946710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 10484361 - 10484472
Alignment:
Q  17 taataaaataataaataagtataaaaatttacttttgcggttcggttcgg---ttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttcc 113  Q
    |||||||| ||||||||||||| ||    |||||||||||||| ||||||   |||||| || |||||||||||||| ||||||||||||||||||||      
T  10484361 taataaaagaataaataagtattaa----tacttttgcggttcagttcggcagttttgagaaagcaatccgaaatccaatccgatcatagcggtttttag 10484456  T
Q  114 aaaacaatatccaaac 129  Q
    || |||| ||||||||    
T  10484457 aagacaacatccaaac 10484472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 10517589 - 10517645
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  10517589 atactaataaaataataaataagaattaaaatttacttttgcggtttggttcagttt 10517645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 3901105 - 3901240
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggt-----tcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggt 107  Q
    |||||||||||  |||||||||||||  | |||||||||||||||     ||||||||||||| |||| |  ||||||| ||| ||| |||| | |||||    
T  3901105 atactaataaag-aataaataagtattcacatttacttttgcggttcggttcggttcggttttaaaaaagtgatccgaagtccaatctgatcttggcggt 3901203  T
Q  108 ttttccaaaacaatatccaaacaccatccaaaaatatt 145  Q
    |||  |||||||| ||||||||| ||||||||||||||    
T  3901204 tttggcaaaacaacatccaaaca-catccaaaaatatt 3901240  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 10386261 - 10386171
Alignment:
Q  33 aagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatcc 125  Q
    |||||| || |||||||||||||||| || ||||||||||||| |  ||||||||||||||  |||| ||||||||||| |||||||| ||||    
T  10386261 aagtattaatatttacttttgcggtt-ggatcggttttgaaaa-gtgatccgaaatccgatatgatcctagcggtttttacaaaacaacatcc 10386171  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 13531428 - 13531376
Alignment:
Q  16 ctaataaaataataaataagtataaaaatttacttttgcggttcggttcggtt 68  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||||| ||||    
T  13531428 ctaataaaagaataaataagtattaatatttatttttgcggttcggtttggtt 13531376  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 1890423 - 1890462
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  1890423 atttgcagggactaaaaccatattttagcctaaaataaaa 1890462  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 31167171 - 31167210
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaaa 263  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  31167171 atttgcagggactaaaaccatattttagccaaaaaaaaaa 31167210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 33747990 - 33747895
Alignment:
Q  26 aataaataagtataaaaatttactttt-gcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaa 120  Q
    ||||||||||||| || || ||||||| ||||||| ||| ||||||||||| || |||||||||  ||||| ||| ||||| ||| | ||||||||    
T  33747990 aataaataagtattaatatgtactttttgcggttcagttaggttttgaaaaagctatccgaaatatgatccaatcttagcgctttctacaaaacaa 33747895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 494434 - 494404
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  494434 atttgcagggactaaaaccatattttagcca 494404  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 15962360 - 15962390
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  15962360 atttgcagggactaaaaccatattttagcca 15962390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 17771940 - 17771910
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  17771940 atttgcagggactaaaaccatattttagcca 17771910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 19296378 - 19296408
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  19296378 atttgcagggactaaaaccatattttagcca 19296408  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 34582558 - 34582528
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  34582558 atttgcagggactaaaaccatattttagcca 34582528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2373208 - 2373179
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2373208 atttgcagggactaaaaccatattttagcc 2373179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2615901 - 2615872
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2615901 atttgcagggactaaaaccatattttagcc 2615872  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 2616211 - 2616240
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2616211 atttgcagggactaaaaccatattttagcc 2616240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 3356171 - 3356142
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3356171 atttgcagggactaaaaccatattttagcc 3356142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 6468339 - 6468310
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  6468339 atttgcagggactaaaaccatattttagcc 6468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 7156131 - 7156160
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  7156131 atttgcagggactaaaaccatattttagcc 7156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 8681087 - 8681116
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  8681087 atttgcagggactaaaaccatattttagcc 8681116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 9896608 - 9896637
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  9896608 atttgcagggactaaaaccatattttagcc 9896637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14655408 - 14655379
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14655408 atttgcagggactaaaaccatattttagcc 14655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 15076175 - 15076204
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  15076175 atttgcagggactaaaaccatattttagcc 15076204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 15117011 - 15117040
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  15117011 atttgcagggactaaaaccatattttagcc 15117040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 22822622 - 22822651
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  22822622 atttgcagggactaaaaccatattttagcc 22822651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 23502511 - 23502540
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23502511 atttgcagggactaaaaccatattttagcc 23502540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 23770410 - 23770439
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  23770410 atttgcagggactaaaaccatattttagcc 23770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 24273857 - 24273828
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24273857 atttgcagggactaaaaccatattttagcc 24273828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24274102 - 24274131
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24274102 atttgcagggactaaaaccatattttagcc 24274131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24692950 - 24692979
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  24692950 atttgcagggactaaaaccatattttagcc 24692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 25431825 - 25431854
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  25431825 atttgcagggactaaaaccatattttagcc 25431854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 30928710 - 30928681
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  30928710 atttgcagggactaaaaccatattttagcc 30928681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 33801714 - 33801743
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  33801714 atttgcagggactaaaaccatattttagcc 33801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 34582863 - 34582892
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  34582863 atttgcagggactaaaaccatattttagcc 34582892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 494723 - 494751
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  494723 atttgcagggactaaaaccatattttagc 494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 4464304 - 4464340
Alignment:
Q  15 actaataaaataataaataagtataaaaatttacttt 51  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  4464304 actaataaaaaaataaataagtattaaaatttacttt 4464340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 23770190 - 23770162
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  23770190 atttgcagggactaaaaccatattttagc 23770162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 31166899 - 31166871
Alignment:
Q  224 atttgcagggactaaaaccatattttagc 252  Q
    |||||||||||||||||||||||||||||    
T  31166899 atttgcagggactaaaaccatattttagc 31166871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 47761 - 47862
Alignment:
Q  43 atttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttccaaaacaatatccaaacaccatccaaaaat 142  Q
    ||||||||||||| || | ||||||||||| || |  ||||||||||||||| |||||||||| ||||| |||||||| ||||||||| |||||| ||||    
T  47761 atttacttttgcgatttgattcggttttgagaaagtgatccgaaatccgatctgatcatagcgatttttacaaaacaacatccaaaca-catccacaaat 47859  T
Q  143 att 145  Q
    |||    
T  47860 att 47862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 15620 - 15505
Alignment:
Q  14 tactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttttgaaaacgcaatccgaaatccgatccgatcatagcggtttttcc 113  Q
    ||||||||||| ||||||||||| | || |||||||||| |||| ||||| ||||||||||| |  ||||||||||  |||||||| ||||  ||||| |    
T  15620 tactaataaaagaataaataagtgtcaatatttacttttacggtccggtttggttttgaaaaagttatccgaaatctaatccgatcctagctatttttac 15521  T
Q  114 aaaacaatatccaaac 129  Q
    ||||||| | ||||||    
T  15520 aaaacaacaaccaaac 15505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 1231 - 1356
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt----------tgaaaacgcaatccgaaatccgatccgatcata 102  Q
    |||||||||||| |||| |||||||| || ||||| |||||||||| ||||||||||          |||||| |  |||||||||||||| ||||| ||    
T  1231 atactaataaaagaatatataagtattaatatttatttttgcggtttggttcggtttaattcgattttgaaaaagtgatccgaaatccgattcgatctta 1330  T
Q  103 gcggtttttccaaaacaatatccaaa 128  Q
    ||||| ||| ||||||||||||||||    
T  1331 gcggtgtttacaaaacaatatccaaa 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16312 - 16256
Alignment:
Q  13 atactaataaaataataaataagtataaaaatttacttttgcggttcggttcggttt 69  Q
    ||||||||||||||||||||| |||| |||||||||||| |  ||||| ||||||||    
T  16312 atactaataaaataataaatatgtattaaaatttactttagttgttcgtttcggttt 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 4283 - 4313
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  4283 atttgcagggactaaaaccatattttagcca 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 12554 - 12524
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  12554 atttgcagggactaaaaccatattttagcca 12524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 4070 - 4032
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  4070 atttgcagggactaaaaccatattttagcctaaaataaa 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 19252 - 19214
Alignment:
Q  224 atttgcagggactaaaaccatattttagccagaaataaa 262  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  19252 atttgcagggactaaaaccatattttagcctaaaataaa 19214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 17937 - 17967
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  17937 atttgcagggactaaaaccatattttagcca 17967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 3561 - 3531
Alignment:
Q  224 atttgcagggactaaaaccatattttagcca 254  Q
    |||||||||||||||||||||||||||||||    
T  3561 atttgcagggactaaaaccatattttagcca 3531  T

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Target: scaffold0065; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 3889 - 3918
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  3889 atttgcagggactaaaaccatattttagcc 3918  T

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Target: scaffold1001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2807 - 2778
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  2807 atttgcagggactaaaaccatattttagcc 2778  T

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Target: scaffold0811 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 1340 - 1311
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  1340 atttgcagggactaaaaccatattttagcc 1311  T

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Target: scaffold0712 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 5238 - 5209
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5238 atttgcagggactaaaaccatattttagcc 5209  T

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Target: scaffold0709 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 5258 - 5229
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5258 atttgcagggactaaaaccatattttagcc 5229  T

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Target: scaffold0535 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 8999 - 9028
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  8999 atttgcagggactaaaaccatattttagcc 9028  T

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Target: scaffold0370 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 260 - 289
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  260 atttgcagggactaaaaccatattttagcc 289  T

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Target: scaffold0210 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14726 - 14697
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14726 atttgcagggactaaaaccatattttagcc 14697  T

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Target: scaffold0210; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 14983 - 15012
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  14983 atttgcagggactaaaaccatattttagcc 15012  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 8359 - 8330
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  8359 atttgcagggactaaaaccatattttagcc 8330  T

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Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 8613 - 8642
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  8613 atttgcagggactaaaaccatattttagcc 8642  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 5428 - 5399
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5428 atttgcagggactaaaaccatattttagcc 5399  T

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Target: scaffold0051; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 5679 - 5708
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  5679 atttgcagggactaaaaccatattttagcc 5708  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 12211 - 12182
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  12211 atttgcagggactaaaaccatattttagcc 12182  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 10197 - 10168
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10197 atttgcagggactaaaaccatattttagcc 10168  T

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Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 10486 - 10515
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  10486 atttgcagggactaaaaccatattttagcc 10515  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 366244 - 366273
Alignment:
Q  224 atttgcagggactaaaaccatattttagcc 253  Q
    ||||||||||||||||||||||||||||||    
T  366244 atttgcagggactaaaaccatattttagcc 366273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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