View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16654_low_10 (Length: 380)
Name: NF16654_low_10
Description: NF16654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16654_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 21847655 - 21848022
Alignment:
| Q |
1 |
gatttcacgcaacggtataatttaggaacggctaacatggctaatgcgttgtgagtgtttcattgttgtcggcattgagggctagtcacgaagagcttta |
100 |
Q |
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| T |
21847655 |
gattttacgcaacagtgtaatttagaaacggctaacatggctaatgcgttgtgagtgtttcattgttgtcggcattgagggctagtcacgaagagcttta |
21847754 |
T |
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| Q |
101 |
tgagatgtttggagatcaaaatttggaagtcaagtttgaacctaacacttgaaagctatgtattgccaaatttggaaagaaattgacatgcgcgatttag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
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| T |
21847755 |
tgagatgtttggagatcaaaatttggaagtcaagtttgaacctaacacttgaaagctatgtattgccaaatttggaaagaaattaacacgcgcgatttag |
21847854 |
T |
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| Q |
201 |
aactggctacaatggttttgtgttgaggattggaagacannnnnnncgtggacactaccaatgtatgtttaccgtgtgtgaacgatcgaaagagtaagtg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
21847855 |
aactggctacaatggttttgtgttgaggattggaagacatttttttcgtggacactaccaatgtatgtttaccgtgtgtgaacgatcaaaagagtaagtg |
21847954 |
T |
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| Q |
301 |
cttgtgaacggaaatatttacgtatggtatggaatgattgagggaaatcaacaaggatgttgaaattg |
368 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21847955 |
cttgtgaacggaaatatttacgtatggtatggaatgattgagggaaatcaacaaggatgttgaaattg |
21848022 |
T |
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