View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16654_low_16 (Length: 333)

Name: NF16654_low_16
Description: NF16654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16654_low_16
NF16654_low_16
[»] chr7 (29 HSPs)
chr7 (34-315)||(17192114-17192396)
chr7 (34-133)||(17186560-17186660)
chr7 (263-315)||(45221968-45222020)
chr7 (263-315)||(10311924-10311976)
chr7 (263-315)||(21254592-21254644)
chr7 (263-315)||(21744606-21744658)
chr7 (263-315)||(31511508-31511560)
chr7 (263-315)||(32169020-32169072)
chr7 (263-315)||(33027084-33027136)
chr7 (263-315)||(35587787-35587839)
chr7 (263-315)||(40637055-40637107)
chr7 (263-315)||(42587278-42587330)
chr7 (263-315)||(43254311-43254363)
chr7 (263-315)||(45686813-45686865)
chr7 (263-315)||(48831948-48832000)
chr7 (264-315)||(40105901-40105952)
chr7 (265-315)||(36246273-36246323)
chr7 (265-315)||(36436354-36436404)
chr7 (265-315)||(40259054-40259104)
chr7 (263-315)||(9487615-9487667)
chr7 (263-315)||(47470857-47470909)
chr7 (263-315)||(47587007-47587059)
chr7 (272-315)||(21374841-21374884)
chr7 (264-315)||(48590922-48590973)
chr7 (265-315)||(19831894-19831944)
chr7 (263-315)||(21313692-21313743)
chr7 (263-315)||(27089551-27089603)
chr7 (263-315)||(27188698-27188750)
chr7 (263-315)||(33203563-33203615)
[»] chr3 (48 HSPs)
chr3 (51-266)||(11391560-11391794)
chr3 (34-175)||(11367004-11367146)
chr3 (34-175)||(11375712-11375854)
chr3 (34-147)||(11385512-11385626)
chr3 (34-133)||(11362716-11362816)
chr3 (263-315)||(52795102-52795154)
chr3 (264-315)||(52931045-52931096)
chr3 (265-315)||(43525944-43525994)
chr3 (193-266)||(11366897-11366969)
chr3 (193-266)||(11375605-11375677)
chr3 (263-315)||(2579819-2579871)
chr3 (263-315)||(4240486-4240538)
chr3 (263-315)||(19948210-19948262)
chr3 (263-315)||(24536446-24536498)
chr3 (263-315)||(28676783-28676835)
chr3 (263-315)||(29718093-29718145)
chr3 (263-315)||(30864634-30864686)
chr3 (263-315)||(35499809-35499861)
chr3 (263-315)||(38185978-38186030)
chr3 (263-315)||(40479920-40479972)
chr3 (263-315)||(44545424-44545476)
chr3 (263-315)||(44748685-44748737)
chr3 (263-315)||(45344900-45344952)
chr3 (263-315)||(46247863-46247915)
chr3 (263-315)||(47897494-47897546)
chr3 (263-315)||(49852935-49852987)
chr3 (263-315)||(50316921-50316973)
chr3 (263-315)||(50499970-50500022)
chr3 (263-315)||(54541834-54541886)
chr3 (263-315)||(54672072-54672124)
chr3 (263-315)||(55305001-55305053)
chr3 (264-315)||(21604006-21604057)
chr3 (263-314)||(25570588-25570639)
chr3 (264-315)||(26541168-26541219)
chr3 (263-314)||(29081173-29081224)
chr3 (265-315)||(33392111-33392161)
chr3 (265-315)||(37528617-37528667)
chr3 (265-315)||(40563257-40563307)
chr3 (265-314)||(16127033-16127082)
chr3 (263-308)||(48943197-48943242)
chr3 (263-315)||(38891878-38891930)
chr3 (263-315)||(44845832-44845884)
chr3 (265-309)||(53779245-53779289)
chr3 (263-314)||(43740185-43740236)
chr3 (263-309)||(21707358-21707404)
chr3 (197-266)||(11385443-11385511)
chr3 (263-315)||(8873074-8873126)
chr3 (263-315)||(37088492-37088544)
[»] scaffold1173 (2 HSPs)
scaffold1173 (34-175)||(2331-2473)
scaffold1173 (193-266)||(2224-2296)
[»] chr5 (37 HSPs)
chr5 (263-315)||(25872113-25872165)
chr5 (265-315)||(35640147-35640197)
chr5 (263-315)||(3037303-3037355)
chr5 (263-315)||(5997783-5997835)
chr5 (263-315)||(7651847-7651899)
chr5 (263-315)||(9160570-9160622)
chr5 (263-315)||(12713519-12713571)
chr5 (263-315)||(13156771-13156823)
chr5 (263-315)||(13228351-13228403)
chr5 (263-315)||(15530642-15530694)
chr5 (263-315)||(27130541-27130593)
chr5 (263-315)||(29391992-29392044)
chr5 (263-315)||(30412490-30412542)
chr5 (263-315)||(31168865-31168917)
chr5 (263-315)||(32381552-32381604)
chr5 (263-315)||(32383056-32383108)
chr5 (263-315)||(36686023-36686075)
chr5 (263-315)||(39744420-39744472)
chr5 (263-315)||(43402651-43402703)
chr5 (263-314)||(1711081-1711132)
chr5 (263-314)||(5591796-5591847)
chr5 (264-315)||(8023863-8023914)
chr5 (265-315)||(4221360-4221410)
chr5 (265-315)||(24794186-24794236)
chr5 (263-308)||(14647251-14647296)
chr5 (263-315)||(2178967-2179019)
chr5 (263-315)||(2236394-2236446)
chr5 (263-315)||(2671614-2671666)
chr5 (263-315)||(3669741-3669793)
chr5 (263-315)||(6603788-6603840)
chr5 (263-315)||(9587071-9587123)
chr5 (263-315)||(12774783-12774835)
chr5 (263-315)||(19525956-19526008)
chr5 (263-315)||(19956179-19956231)
chr5 (263-315)||(30299905-30299957)
chr5 (263-315)||(39275630-39275682)
chr5 (265-315)||(12363492-12363542)
[»] chr1 (33 HSPs)
chr1 (263-315)||(25602190-25602242)
chr1 (265-314)||(44910052-44910101)
chr1 (263-315)||(323076-323128)
chr1 (263-315)||(1507615-1507667)
chr1 (263-315)||(1918236-1918288)
chr1 (263-315)||(3270869-3270921)
chr1 (263-315)||(9169259-9169311)
chr1 (263-315)||(15313454-15313506)
chr1 (263-315)||(17046933-17046985)
chr1 (263-315)||(22099129-22099181)
chr1 (263-315)||(26204485-26204537)
chr1 (263-315)||(29586369-29586421)
chr1 (263-315)||(33561781-33561833)
chr1 (263-315)||(36300977-36301029)
chr1 (263-315)||(38967343-38967395)
chr1 (263-315)||(39826804-39826856)
chr1 (263-315)||(41151092-41151144)
chr1 (263-315)||(42064191-42064243)
chr1 (263-315)||(46370015-46370067)
chr1 (263-315)||(49220345-49220397)
chr1 (263-315)||(50351243-50351295)
chr1 (263-314)||(19898780-19898831)
chr1 (272-314)||(3661157-3661199)
chr1 (265-315)||(13121465-13121515)
chr1 (265-315)||(26843962-26844012)
chr1 (264-314)||(36838568-36838618)
chr1 (271-315)||(7710841-7710885)
chr1 (263-315)||(33524739-33524791)
chr1 (263-315)||(38676699-38676751)
chr1 (263-315)||(47134410-47134462)
chr1 (277-315)||(50171183-50171221)
chr1 (263-315)||(17499756-17499809)
chr1 (279-315)||(30774292-30774328)
[»] chr4 (46 HSPs)
chr4 (263-316)||(53274899-53274952)
chr4 (263-315)||(3009915-3009967)
chr4 (263-315)||(4392614-4392666)
chr4 (263-315)||(4939274-4939326)
chr4 (263-315)||(8829703-8829755)
chr4 (263-315)||(11600887-11600939)
chr4 (263-315)||(15636146-15636198)
chr4 (263-315)||(19513770-19513822)
chr4 (263-315)||(22038245-22038297)
chr4 (263-315)||(26826725-26826777)
chr4 (263-315)||(27185520-27185572)
chr4 (263-315)||(27397654-27397706)
chr4 (263-315)||(33005003-33005055)
chr4 (263-315)||(35468219-35468271)
chr4 (263-315)||(36007906-36007958)
chr4 (263-315)||(37115178-37115230)
chr4 (263-315)||(42117100-42117152)
chr4 (263-315)||(43225572-43225624)
chr4 (263-315)||(52670198-52670250)
chr4 (263-315)||(55495775-55495827)
chr4 (263-315)||(56372639-56372691)
chr4 (264-315)||(4355481-4355532)
chr4 (263-314)||(45780652-45780703)
chr4 (265-315)||(7706576-7706626)
chr4 (265-315)||(12233857-12233907)
chr4 (265-315)||(45906343-45906393)
chr4 (278-315)||(55358241-55358278)
chr4 (263-315)||(8942107-8942159)
chr4 (263-315)||(9031883-9031935)
chr4 (263-315)||(11151827-11151879)
chr4 (263-315)||(18583048-18583100)
chr4 (263-315)||(21370084-21370136)
chr4 (263-315)||(29664126-29664178)
chr4 (263-315)||(31679166-31679218)
chr4 (263-315)||(33115179-33115231)
chr4 (263-315)||(35777281-35777333)
chr4 (263-315)||(35822187-35822239)
chr4 (263-315)||(39087446-39087498)
chr4 (263-315)||(46895487-46895539)
chr4 (263-315)||(55856415-55856467)
chr4 (272-315)||(25440381-25440424)
chr4 (272-315)||(29413735-29413778)
chr4 (277-315)||(51010967-51011005)
chr4 (263-304)||(23867766-23867807)
chr4 (263-315)||(44442285-44442337)
chr4 (263-315)||(47417370-47417422)
[»] scaffold0362 (1 HSPs)
scaffold0362 (263-315)||(5608-5660)
[»] scaffold0197 (2 HSPs)
scaffold0197 (263-315)||(30071-30123)
scaffold0197 (263-315)||(27964-28015)
[»] scaffold0122 (1 HSPs)
scaffold0122 (263-315)||(12604-12656)
[»] scaffold0027 (1 HSPs)
scaffold0027 (263-315)||(41654-41706)
[»] scaffold0016 (1 HSPs)
scaffold0016 (263-315)||(93273-93325)
[»] chr8 (25 HSPs)
chr8 (263-315)||(1893735-1893787)
chr8 (263-315)||(6338525-6338577)
chr8 (263-315)||(11740990-11741042)
chr8 (263-315)||(16423036-16423088)
chr8 (263-315)||(27781309-27781361)
chr8 (263-315)||(31478283-31478335)
chr8 (263-315)||(31581901-31581953)
chr8 (263-315)||(36112735-36112787)
chr8 (263-315)||(37587612-37587664)
chr8 (263-315)||(38171314-38171366)
chr8 (263-315)||(39702513-39702565)
chr8 (263-315)||(41693739-41693791)
chr8 (263-315)||(42203297-42203349)
chr8 (263-315)||(43276665-43276717)
chr8 (263-315)||(45141342-45141394)
chr8 (263-314)||(44827202-44827253)
chr8 (265-315)||(25023513-25023563)
chr8 (265-315)||(28716871-28716921)
chr8 (263-315)||(8271113-8271165)
chr8 (271-315)||(10619013-10619057)
chr8 (263-315)||(31687944-31687996)
chr8 (263-315)||(36681336-36681388)
chr8 (263-315)||(39871471-39871523)
chr8 (265-315)||(32541430-32541480)
chr8 (263-308)||(39319969-39320014)
[»] chr6 (15 HSPs)
chr6 (263-315)||(558568-558620)
chr6 (263-315)||(2442632-2442684)
chr6 (263-315)||(5943199-5943251)
chr6 (263-315)||(6709583-6709635)
chr6 (263-315)||(12297572-12297624)
chr6 (263-315)||(30811036-30811088)
chr6 (263-315)||(31099909-31099961)
chr6 (263-315)||(31451849-31451901)
chr6 (263-315)||(32731966-32732018)
chr6 (263-315)||(34904152-34904204)
chr6 (264-315)||(34232803-34232854)
chr6 (263-315)||(20805197-20805249)
chr6 (277-315)||(34684917-34684955)
chr6 (263-304)||(12432517-12432558)
chr6 (263-315)||(10856333-10856385)
[»] chr2 (33 HSPs)
chr2 (263-315)||(4038231-4038283)
chr2 (263-315)||(5039973-5040025)
chr2 (263-315)||(9887197-9887249)
chr2 (263-315)||(10728035-10728087)
chr2 (263-315)||(13111626-13111678)
chr2 (263-315)||(15521684-15521736)
chr2 (263-315)||(16487087-16487139)
chr2 (263-315)||(17263637-17263689)
chr2 (263-315)||(18710368-18710420)
chr2 (263-315)||(28382564-28382616)
chr2 (263-315)||(36999694-36999746)
chr2 (263-315)||(37356374-37356426)
chr2 (263-315)||(40024826-40024878)
chr2 (263-315)||(41322961-41323013)
chr2 (263-315)||(43135815-43135867)
chr2 (264-315)||(4385417-4385468)
chr2 (263-314)||(4453406-4453457)
chr2 (263-309)||(8815431-8815477)
chr2 (263-315)||(650664-650716)
chr2 (263-315)||(2546208-2546260)
chr2 (279-315)||(6153369-6153405)
chr2 (263-315)||(18212311-18212363)
chr2 (263-315)||(21865452-21865504)
chr2 (263-315)||(31616277-31616329)
chr2 (263-315)||(36712420-36712472)
chr2 (263-315)||(39167956-39168008)
chr2 (277-315)||(38578899-38578937)
chr2 (263-315)||(2266035-2266088)
chr2 (278-315)||(3377597-3377634)
chr2 (263-315)||(8340184-8340237)
chr2 (263-315)||(10839463-10839516)
chr2 (263-315)||(13527788-13527840)
chr2 (263-315)||(43507446-43507498)
[»] scaffold0246 (1 HSPs)
scaffold0246 (265-315)||(7264-7314)
[»] scaffold0031 (1 HSPs)
scaffold0031 (265-315)||(126649-126699)
[»] scaffold0002 (1 HSPs)
scaffold0002 (263-315)||(431465-431517)
[»] scaffold0087 (1 HSPs)
scaffold0087 (277-315)||(52929-52967)
[»] scaffold0116 (1 HSPs)
scaffold0116 (278-315)||(22802-22839)


Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 17192114 - 17192396
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgtcttacatgtttcaagcagtacatatattt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17192114 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgtcttacatgtttcaagcagtacatatattt 17192213  T
Q  134 aatcttattaatatatttctgatgtttcttgtgataagaaatcaatttcttgcgatgtctttgcatgctttggaaggaa-gaaaaacaaaatctaattct 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17192214 aatcttattaatatatttctgatgtttcttgtgataagaaatcaatttcttgcgatgtctttgcatgctttggaaggaaggaaaaacaaaatctaattct 17192313  T
Q  233 agatcatgagaaagtaaaaataaaattcaaggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17192314 agatcatgagaaagtaaaaataaaattcaaggaataaggggatggtagtctttattacatagtttattataaaaattgtaatg 17192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 17186560 - 17186660
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactactt-gtcttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| |||||||||   ||||||||||||||||||| |||  ||| | |||||||||||||| || ||||||||||    
T  17186560 tcatactttagaaaatatagttgatgtattgaccaagttactcattagtaacaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 17186659  T
Q  133 t 133  Q
    |    
T  17186660 t 17186660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 45221968 - 45222020
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  45221968 ggaataaagggatagtagtctttattacatagcttattataaaaattataatg 45222020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 10311924 - 10311976
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  10311924 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 10311976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 21254592 - 21254644
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  21254592 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 21254644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 21744658 - 21744606
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  21744658 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 21744606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 31511560 - 31511508
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31511560 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31511508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 32169072 - 32169020
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || |||||||||||||||||||||    
T  32169072 ggaataaagggatagtagtctttattacgtaccttattataaaaattgtaatg 32169020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 33027136 - 33027084
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  33027136 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 33027084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 35587839 - 35587787
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  35587839 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 35587787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 40637055 - 40637107
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||| |||||    
T  40637055 ggaataaagggatggtagtctttataacgtagcttattataaaaattataatg 40637107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 42587278 - 42587330
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  42587278 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 42587330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 43254363 - 43254311
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  43254363 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 43254311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 45686813 - 45686865
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  45686813 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 45686865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 48831948 - 48832000
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  48831948 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 48832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 40105901 - 40105952
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| ||||| |||||||| ||||||||||||||||||||||||    
T  40105901 gaataaagggatagtagtttttattacgtagcttattataaaaattgtaatg 40105952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 36246273 - 36246323
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36246273 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 36246323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 36436404 - 36436354
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36436404 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 36436354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 40259104 - 40259054
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||||    
T  40259104 aataaagggataatagtctttattacgtagcttattataaaaattgtaatg 40259054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 9487667 - 9487615
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  9487667 ggaataaaaggatagtagtctttattacgtagcttattataaaaattataatg 9487615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 47470857 - 47470909
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||| |||||    
T  47470857 ggaataaagagatagtagtctttattacgtagcttattataaaaattataatg 47470909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 47587007 - 47587059
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  47587007 ggaataaagggattatagtctttattacgtagcttattataaaaattataatg 47587059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 21374884 - 21374841
Alignment:
Q  272 ggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||| |||||||||||||| |||||||||||||||||| |||||    
T  21374884 ggatagtagtctttattacgtagcttattataaaaattataatg 21374841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 48590973 - 48590922
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| |||||  ||||||||||||| ||| ||||||||||||||||||||    
T  48590973 gaataaagggataatagtctttattacgtagtttattataaaaattgtaatg 48590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 19831894 - 19831944
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||| |||||    
T  19831894 aataaagggatagtagtttttattacgtagcttattataaaaattataatg 19831944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 21313692 - 21313743
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||| |||||||||||||||||||    
T  21313692 ggaataaagtgatagtagtctttattac-tagcctattataaaaattgtaatg 21313743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 27089551 - 27089603
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||| |||||||| ||| |||||||||||||| |||||    
T  27089551 ggaataaagggatagtagtttttattacgtagtttattataaaaattataatg 27089603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 27188750 - 27188698
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||| |||||||| ||| |||||||||||||| |||||    
T  27188750 ggaataaagggatagtagtttttattacgtagtttattataaaaattataatg 27188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 33203563 - 33203615
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  |||| |||||||| |||||||||||||||||| |||||    
T  33203563 ggaataaagggataatagtttttattacgtagcttattataaaaattataatg 33203615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 51 - 266
Target Start/End: Complemental strand, 11391794 - 11391560
Alignment:
Q  51 tagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgt-cttacatgtttcaagcagtacatatatttaatcttattaatatat 149  Q
    ||||||||||| |||||||||  ||||||| |||||||||||| |||| ||||  ||| ||||||||||||| || |||||||| |||||||||||||||    
T  11391794 tagctgatgtattgaccaagttagtcattactaacaaattgaagcactgcttgaacttgcatgtttcaagcactatatatattttatcttattaatatat 11391695  T
Q  150 ttctg---atgtttcttgtgataagaaat---------------caatttcttgcgatgtctttgcatgctttggaaggaagaaaaacaaaatctaattc 231  Q
    || |    |||||||||||||| ||||||               |||||||||| ||||| ||||||||||||| |||||||||||| |||||||| |||    
T  11391694 ttttttttatgtttcttgtgattagaaatagttgatggtgagatcaatttcttgtgatgtttttgcatgctttgaaaggaagaaaaagaaaatctagttc 11391595  T
Q  232 tagatcatgagaaagtaaaaataaaattcaaggaa 266  Q
    |||||||| | ||||||||||||||||||||||||    
T  11391594 tagatcataaaaaagtaaaaataaaattcaaggaa 11391560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 11367146 - 11367004
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgt-cttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| |||||||||   ||||||||||||||||||| |||  ||||  |||||||||||||| || ||||||||||    
T  11367146 tcatactttagaaaatatagttgatgtattgaccaagttactcattagtaacaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 11367047  T
Q  133 taatcttattaatatatttctgatgtttcttgtgataagaaat 175  Q
    | ||||||||||||||||| ||||||||||||| |||||||||    
T  11367046 ttatcttattaatatatttatgatgtttcttgtaataagaaat 11367004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 11375854 - 11375712
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgt-cttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| |||||||||   ||||||||||||||||||| |||  ||||  |||||||||||||| || ||||||||||    
T  11375854 tcatactttagaaaatatagttgatgtattgaccaagttactcattagtaacaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 11375755  T
Q  133 taatcttattaatatatttctgatgtttcttgtgataagaaat 175  Q
    | ||||||||||||||||| ||||||||||||| |||||||||    
T  11375754 ttatcttattaatatatttatgatgtttcttgtaataagaaat 11375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 11385626 - 11385512
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgt-cttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| ||||||| |   |||||||||| |||||||| |||  ||||  |||||||||||||| || ||||||||||    
T  11385626 tcatactttagaaaatatagttgatgtattgaccaaattactcattagtaaaaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 11385527  T
Q  133 taatcttattaatat 147  Q
    | |||||||||||||    
T  11385526 ttatcttattaatat 11385512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 11362816 - 11362716
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactactt-gtcttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| ||||||| |   ||||||||||||||||||| |||  ||| | |||||||||||||| || ||||||||||    
T  11362816 tcatactttagaaaatatagttgatgtattgaccaacttactcattagtaacaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 11362717  T
Q  133 t 133  Q
    |    
T  11362716 t 11362716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 52795154 - 52795102
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  52795154 ggaataaagggatagtagtctttattacgtagcttattataaaaattgtaatg 52795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 52931045 - 52931096
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  52931045 gaataaagggatagtagtctttattacgtagcttattataaaaattgtaatg 52931096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 43525994 - 43525944
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  43525994 aataaagggatagtagtctttattacatagcttattataaaaattataatg 43525944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 11366969 - 11366897
Alignment:
Q  193 tttgcatgctttggaaggaagaaaaacaaaatctaattctagatcatgagaaagtaaaaataaaattcaaggaa 266  Q
    |||||||| ||||||||||||| || || |||| |||||||| |||| | ||||||||||||||||||||||||    
T  11366969 tttgcatgatttggaaggaagacaagcataatccaattctaggtcat-ataaagtaaaaataaaattcaaggaa 11366897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 11375677 - 11375605
Alignment:
Q  193 tttgcatgctttggaaggaagaaaaacaaaatctaattctagatcatgagaaagtaaaaataaaattcaaggaa 266  Q
    |||||||| ||||||||||||| || || |||| |||||||| |||| | ||||||||||||||||||||||||    
T  11375677 tttgcatgatttggaaggaagacaagcataatccaattctaggtcat-ataaagtaaaaataaaattcaaggaa 11375605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 2579819 - 2579871
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  2579819 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 2579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 4240538 - 4240486
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4240538 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 4240486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 19948210 - 19948262
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  19948210 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 19948262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 24536446 - 24536498
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| ||||||||||||||||||||||||    
T  24536446 ggaataaagggataatagtctttattacgtagcttattataaaaattgtaatg 24536498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 28676783 - 28676835
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  28676783 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 28676835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 29718093 - 29718145
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  29718093 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 29718145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 30864686 - 30864634
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  30864686 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 30864634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 35499861 - 35499809
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  35499861 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 35499809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 38186030 - 38185978
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  38186030 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 38185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 40479920 - 40479972
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  40479920 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 40479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 44545476 - 44545424
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  44545476 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 44545424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 44748685 - 44748737
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  44748685 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 44748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 45344900 - 45344952
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  45344900 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 45344952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 46247863 - 46247915
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  46247863 ggaataaagggattgtagtctttattacgtagcttattataaaaattataatg 46247915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 47897494 - 47897546
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||| |||||    
T  47897494 ggaataaagggatagtagtctttattacatagtttattataaaaattataatg 47897546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 49852935 - 49852987
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| ||||||||||||||||||||||||    
T  49852935 ggaataaagagatagtagtctttattacgtagcttattataaaaattgtaatg 49852987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 50316921 - 50316973
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  50316921 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 50316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 50500022 - 50499970
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  50500022 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 50499970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 54541834 - 54541886
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  54541834 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 54541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 54672072 - 54672124
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  54672072 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 54672124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 55305001 - 55305053
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  55305001 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 55305053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 21604057 - 21604006
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  21604057 gaataaagggatagtagtctttattacgtagcttattataaaaattataatg 21604006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 25570639 - 25570588
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  25570639 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 25570588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 26541219 - 26541168
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  26541219 gaataaagggatagtagtctttattacgtagcttattataaaaattataatg 26541168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 29081173 - 29081224
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  29081173 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 29081224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 33392161 - 33392111
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  33392161 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 33392111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 37528617 - 37528667
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  37528617 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 37528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 40563257 - 40563307
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  40563257 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 40563307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 16127033 - 16127082
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  16127033 aataaagggatagtagtctttattacgtagcttattataaaaattataat 16127082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 48943242 - 48943197
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaat 308  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||    
T  48943242 ggaataaagggatagtagtctttattacgtagcttattataaaaat 48943197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 38891878 - 38891930
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  38891878 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 38891930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 44845884 - 44845832
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  44845884 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 44845832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 53779289 - 53779245
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaatt 309  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||    
T  53779289 aataaagggatagtagtctttattacgtagcttattataaaaatt 53779245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 43740185 - 43740236
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||||| ||||    
T  43740185 ggaataaagggatagtaatctttattacgtagcttattataaaaattataat 43740236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 21707404 - 21707358
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaatt 309  Q
    ||||||| || || |||||||||||||| ||||||||||||||||||    
T  21707404 ggaataaaggtatagtagtctttattacgtagcttattataaaaatt 21707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 11385511 - 11385443
Alignment:
Q  197 catgctttggaaggaagaaaaacaaaatctaattctagatcatgagaaagtaaaaataaaattcaaggaa 266  Q
    |||| ||||||||||||| || || |||| |||||||| |||| | |||||| |||||||||||||||||    
T  11385511 catgatttggaaggaagacaagcataatccaattctaggtcat-ataaagtagaaataaaattcaaggaa 11385443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 8873126 - 8873074
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| | | |||||||||||||| |||||    
T  8873126 ggaataaagggatagtagtctttattacgtcgattattataaaaattataatg 8873074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 37088544 - 37088492
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || || |||||||||||| |||||    
T  37088544 ggaataaagggatagtagtctttattacgtaactaattataaaaattataatg 37088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1173 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold1173
Description:

Target: scaffold1173; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 2473 - 2331
Alignment:
Q  34 tcatacttcagaaaatatagctgatgtagtgaccaagtcggtcattagtaacaaattgaatcactacttgt-cttacatgtttcaagcagtacatatatt 132  Q
    |||||||| ||||||||||| ||||||| ||||||| |   ||||||||||||||||||| |||  ||||  |||||||||||||| || ||||||||||    
T  2473 tcatactttagaaaatatagttgatgtattgaccaacttactcattagtaacaaattgaagcaccgcttggacttacatgtttcaaacactacatatatt 2374  T
Q  133 taatcttattaatatatttctgatgtttcttgtgataagaaat 175  Q
    | ||||||||||||||||| ||||||||||||| |||||||||    
T  2373 ttatcttattaatatatttatgatgtttcttgtaataagaaat 2331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1173; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 2296 - 2224
Alignment:
Q  193 tttgcatgctttggaaggaagaaaaacaaaatctaattctagatcatgagaaagtaaaaataaaattcaaggaa 266  Q
    |||||||| ||||||||||||| || || |||| |||||||| |||| | ||||||||||||||||||||||||    
T  2296 tttgcatgatttggaaggaagacaagcataatccaattctaggtcat-ataaagtaaaaataaaattcaaggaa 2224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 25872113 - 25872165
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  25872113 ggaataacgggatcgtagtctttattacgtagcttattataaaaattgtaatg 25872165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 35640197 - 35640147
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  35640197 aataaagggatagtagtctttattacatagcttattataaaaattataatg 35640147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 3037303 - 3037355
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  3037303 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 3037355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 5997783 - 5997835
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  5997783 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 5997835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 7651899 - 7651847
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  7651899 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 7651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 9160570 - 9160622
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  9160570 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 9160622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 12713571 - 12713519
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||| |||||    
T  12713571 ggaataaagggatggtagtctttattacgtagcttattattaaaattataatg 12713519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 13156771 - 13156823
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  13156771 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 13156823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 13228351 - 13228403
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  13228351 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 13228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 15530694 - 15530642
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  15530694 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 15530642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 27130593 - 27130541
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  27130593 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 27130541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 29391992 - 29392044
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  29391992 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 29392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 30412490 - 30412542
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  30412490 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 30412542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 31168865 - 31168917
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31168865 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31168917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 32381552 - 32381604
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  32381552 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 32381604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 32383108 - 32383056
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  32383108 ggaataatgggatagtagtctttattacgtagcttattataaaaattataatg 32383056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 36686075 - 36686023
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36686075 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 36686023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 39744420 - 39744472
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  39744420 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 39744472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 43402703 - 43402651
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  43402703 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 43402651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 1711081 - 1711132
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  1711081 ggaataaagggattgtagtctttattacgtagcttattataaaaattataat 1711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 5591847 - 5591796
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  5591847 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 5591796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 8023863 - 8023914
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  8023863 gaataaagggatagtagtctttattacgtagcttattataaaaattataatg 8023914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 4221360 - 4221410
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4221360 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 4221410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 24794236 - 24794186
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  24794236 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 24794186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 14647251 - 14647296
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaat 308  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||    
T  14647251 ggaataaagggatagtagtctttattacgtagcttattataaaaat 14647296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 2179019 - 2178967
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||| |||||    
T  2179019 ggaataaagggatagtagtctttattacgtagtttattataaaaattataatg 2178967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 2236394 - 2236446
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  2236394 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 2236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 2671666 - 2671614
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||| |||||    
T  2671666 ggaataaagggatagtagtctttattacgtagtttattataaaaattataatg 2671614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 3669793 - 3669741
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||| |||||    
T  3669793 ggaataaagagatagtagtctttattacgtagcttattataaaaattataatg 3669741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 6603788 - 6603840
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||||| |||||    
T  6603788 ggaataaagggatagtaatctttattacgtagcttattataaaaattataatg 6603840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 9587071 - 9587123
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  9587071 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 9587123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 12774835 - 12774783
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||||| |||||| |||||    
T  12774835 ggaataaagggatagtagtctttattacgtagcttattattaaaattataatg 12774783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 19526008 - 19525956
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||  |||||||||||||||||| |||||    
T  19526008 ggaataaagggatagtagtctttattatgtagcttattataaaaattataatg 19525956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 19956179 - 19956231
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||  |||||||||||||||||| |||||    
T  19956179 ggaataaagggatagtagtctttattatgtagcttattataaaaattataatg 19956231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 30299957 - 30299905
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||| |||||    
T  30299957 ggaataacgggatagtagtctttattacgtagtttattataaaaattataatg 30299905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 39275682 - 39275630
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||| |||||    
T  39275682 ggaataaagagatagtagtctttattacgtagcttattataaaaattataatg 39275630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 12363492 - 12363542
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||| ||||||||||| |||||    
T  12363492 aataaagggatagtagtctttattacgtagcttgttataaaaattataatg 12363542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 25602242 - 25602190
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  25602242 ggaataaagggatagtagtctttattacgtagcttattataaaaattgtaatg 25602190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 44910101 - 44910052
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  44910101 aataaagggatagtagtctttattacatagcttattataaaaattataat 44910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 323128 - 323076
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  323128 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 323076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 1507615 - 1507667
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| ||||||||||||||||||||||||    
T  1507615 ggaataaagggataatagtctttattacgtagcttattataaaaattgtaatg 1507667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 1918288 - 1918236
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  1918288 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 1918236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 3270921 - 3270869
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  3270921 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 3270869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 9169311 - 9169259
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  9169311 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 9169259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 15313506 - 15313454
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  15313506 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 15313454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 17046985 - 17046933
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  17046985 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 17046933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 22099181 - 22099129
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  22099181 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 22099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 26204537 - 26204485
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  26204537 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 26204485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 29586421 - 29586369
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  29586421 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 29586369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 33561781 - 33561833
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  33561781 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 33561833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 36300977 - 36301029
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36300977 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 36301029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 38967343 - 38967395
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  38967343 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 38967395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 39826856 - 39826804
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  39826856 ggaataaagggattgtagtctttattacgtagcttattataaaaattataatg 39826804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 41151092 - 41151144
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41151092 ggaataaagggattgtagtctttattacgtagcttattataaaaattataatg 41151144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 42064191 - 42064243
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  42064191 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 42064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 46370067 - 46370015
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  46370067 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 46370015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 49220345 - 49220397
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  49220345 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 49220397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 50351295 - 50351243
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  50351295 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 50351243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 19898780 - 19898831
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  19898780 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 19898831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 3661199 - 3661157
Alignment:
Q  272 ggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  3661199 ggatagtagtctttattacgtagcttattataaaaattgtaat 3661157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 13121465 - 13121515
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| || |||||||||||||||||||||||||||||| |||||    
T  13121465 aataaagggatagttgtctttattacatagcttattataaaaattataatg 13121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 26844012 - 26843962
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  26844012 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 26843962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 36838568 - 36838618
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    |||||| |||||  ||||||||||||| |||||||||||||||||||||||    
T  36838568 gaataaagggataatagtctttattacgtagcttattataaaaattgtaat 36838618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 7710841 - 7710885
Alignment:
Q  271 gggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||    
T  7710841 gggatagtagtctttattacgtagcttattataaaaattataatg 7710885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 33524791 - 33524739
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  33524791 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 33524739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 38676751 - 38676699
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  38676751 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 38676699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 47134410 - 47134462
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||| |||||    
T  47134410 ggaataaagagatagtagtctttattacgtagcttattataaaaattataatg 47134462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 50171183 - 50171221
Alignment:
Q  277 gtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  50171183 gtagtctttattacgtagcttattataaaaattataatg 50171221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 17499756 - 17499809
Alignment:
Q  263 ggaataaggggatggtagtcttt-attacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  17499756 ggaataaagggatagtagtcttttattacgtagcttattataaaaattataatg 17499809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 30774328 - 30774292
Alignment:
Q  279 agtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||| |||||||||||||||||| |||||    
T  30774328 agtctttattacgtagcttattataaaaattataatg 30774292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 53274952 - 53274899
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatgt 316  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  53274952 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatgt 53274899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 3009967 - 3009915
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  3009967 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 3009915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 4392614 - 4392666
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4392614 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 4392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 4939274 - 4939326
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4939274 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 4939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 8829703 - 8829755
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  8829703 ggaataaagggattgtagtctttattacgtagcttattataaaaattataatg 8829755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 11600939 - 11600887
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  11600939 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 11600887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 15636198 - 15636146
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  15636198 ggaataaagggattgtagtctttattacgtagcttattgtaaaaattgtaatg 15636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 19513770 - 19513822
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  19513770 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 19513822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 22038245 - 22038297
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  22038245 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 22038297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 26826777 - 26826725
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  26826777 ggaataaagggattgtagtctttattacgtagcttattataaaaattataatg 26826725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 27185520 - 27185572
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  27185520 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 27185572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 27397654 - 27397706
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  27397654 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 27397706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 33005003 - 33005055
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  33005003 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 33005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 35468271 - 35468219
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  35468271 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 35468219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 36007906 - 36007958
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36007906 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 36007958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 37115178 - 37115230
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  37115178 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 37115230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 42117152 - 42117100
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||| |||||    
T  42117152 ggaataaagggataatagtctttattacatagcttattataaaaattataatg 42117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 43225572 - 43225624
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  43225572 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 43225624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 52670250 - 52670198
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  52670250 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 52670198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 55495775 - 55495827
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  55495775 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 55495827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 56372691 - 56372639
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  56372691 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 56372639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 4355481 - 4355532
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4355481 gaataaagggatagtagtctttattacgtagcttattataaaaattataatg 4355532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 45780652 - 45780703
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  45780652 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 45780703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 7706626 - 7706576
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  7706626 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 7706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 12233857 - 12233907
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  12233857 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 12233907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 45906393 - 45906343
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  45906393 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 45906343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 55358241 - 55358278
Alignment:
Q  278 tagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  55358241 tagtctttattacgtagcttattataaaaattgtaatg 55358278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 8942159 - 8942107
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  8942159 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 8942107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 9031883 - 9031935
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  9031883 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 9031935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 11151827 - 11151879
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  11151827 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 11151879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 18583100 - 18583048
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  18583100 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 18583048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 21370136 - 21370084
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| | ||| |||||||||||||| |||||||||||||||||| |||||    
T  21370136 ggaataaagtgatagtagtctttattacgtagcttattataaaaattataatg 21370084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 29664178 - 29664126
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  29664178 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 29664126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 31679218 - 31679166
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| | |||||||||||| |||||||||||||||||| |||||    
T  31679218 ggaataaagggataggagtctttattacgtagcttattataaaaattataatg 31679166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 33115231 - 33115179
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| | |||||||||||||||| |||||    
T  33115231 ggaataaagggatagtagtctttattacgttgcttattataaaaattataatg 33115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 35777281 - 35777333
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||| |||||||||||| |||||    
T  35777281 ggaataaagggatagtagtctttattacgtagctcattataaaaattataatg 35777333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 35822187 - 35822239
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||||| |||||    
T  35822187 ggaataaagggatagtaatctttattacgtagcttattataaaaattataatg 35822239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 39087446 - 39087498
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| || || |||||||||||||| |||||||||||||||||| |||||    
T  39087446 ggaataaaggtatagtagtctttattacgtagcttattataaaaattataatg 39087498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 46895539 - 46895487
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||||| |||||    
T  46895539 ggaataaagggatagtagtatttattacgtagcttattataaaaattataatg 46895487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 55856415 - 55856467
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  55856415 ggaataaagggatagtagtctttattacgtaacttattataaaaattataatg 55856467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 315
Target Start/End: Original strand, 25440381 - 25440424
Alignment:
Q  272 ggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||| |||||||||||||| |||||||||||||||||| |||||    
T  25440381 ggatagtagtctttattacgtagcttattataaaaattataatg 25440424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 29413778 - 29413735
Alignment:
Q  272 ggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||| |||||||||||||| |||||||||||||||||| |||||    
T  29413778 ggatagtagtctttattacgtagcttattataaaaattataatg 29413735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 51010967 - 51011005
Alignment:
Q  277 gtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  51010967 gtagtctttattacgtagcttattataaaaattataatg 51011005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 23867766 - 23867807
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataa 304  Q
    ||||||| ||||| |||||||||||||| |||||||||||||    
T  23867766 ggaataaagggatagtagtctttattacgtagcttattataa 23867807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 44442337 - 44442285
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||||||||  |||||||||| |||||| |||||    
T  44442337 ggaataaagggatagtagtctttattacgcagcttattatgaaaattataatg 44442285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 47417370 - 47417422
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||| | |||||||| |||||||||||||||||| |||||    
T  47417370 ggaataaagggatagtattttttattacgtagcttattataaaaattataatg 47417422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 5660 - 5608
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  5660 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 30071 - 30123
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  30071 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 30123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 27964 - 28015
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||||||||    
T  27964 ggaataaagggaaagtagtctttattac-tagcttattataaaaattgtaatg 28015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 12604 - 12656
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  12604 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 12656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 41654 - 41706
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41654 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 41706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 93273 - 93325
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  93273 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 93325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 1893735 - 1893787
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  1893735 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 1893787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 6338577 - 6338525
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  6338577 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 6338525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 11740990 - 11741042
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  11740990 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 11741042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 16423088 - 16423036
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  16423088 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 16423036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 27781361 - 27781309
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  27781361 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 27781309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 31478335 - 31478283
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31478335 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31478283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 31581953 - 31581901
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31581953 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 36112735 - 36112787
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36112735 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 36112787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 37587612 - 37587664
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  37587612 ggaataaagggatagtagtctttattacgtagcttattataaaatttgtaatg 37587664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 38171314 - 38171366
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  38171314 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 38171366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 39702565 - 39702513
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  39702565 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 39702513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 41693739 - 41693791
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41693739 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 41693791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 42203297 - 42203349
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| ||||||||||||||||||||||||    
T  42203297 ggaataaatggatagtagtctttattacgtagcttattataaaaattgtaatg 42203349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 43276665 - 43276717
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  43276665 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 43276717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 45141342 - 45141394
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  45141342 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 45141394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 44827202 - 44827253
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  44827202 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 44827253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 25023563 - 25023513
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  25023563 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 25023513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 28716921 - 28716871
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  28716921 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 28716871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 8271165 - 8271113
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  8271165 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 8271113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 10619057 - 10619013
Alignment:
Q  271 gggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||    
T  10619057 gggatagtagtctttattacgtagcttattataaaaattataatg 10619013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 31687944 - 31687996
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  31687944 ggaataaagggatattagtctttattacgtagcttattataaaaattataatg 31687996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 36681336 - 36681388
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| || || |||||||||||||| |||||||||||||||||| |||||    
T  36681336 ggaataaaggaatagtagtctttattacgtagcttattataaaaattataatg 36681388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 39871523 - 39871471
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| | |||||||||||| |||||||||||||||||| |||||    
T  39871523 ggaataaagggatagcagtctttattacgtagcttattataaaaattataatg 39871471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 32541480 - 32541430
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| || ||||||||||||||| |||||    
T  32541480 aataaagggatagtagtctttattacgtaacttattataaaaattataatg 32541430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 39319969 - 39320014
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaat 308  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||    
T  39319969 ggaataaatggatagtagtctttattacgtagcttattataaaaat 39320014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 558620 - 558568
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  558620 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 558568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 2442684 - 2442632
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  2442684 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 2442632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 5943251 - 5943199
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||||| || ||||||||||||||||||||||||    
T  5943251 ggaataaagggatagtagtctttataacgtagcttattataaaaattgtaatg 5943199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 6709583 - 6709635
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  6709583 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 6709635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 12297624 - 12297572
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  12297624 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 12297572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 30811036 - 30811088
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  30811036 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 30811088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 31099909 - 31099961
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31099909 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 31451849 - 31451901
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  31451849 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 31451901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 32732018 - 32731966
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  32732018 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 32731966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 34904204 - 34904152
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  34904204 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 34904152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 34232803 - 34232854
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  34232803 gaataaagggatagtagtctttattacgtagcttattataaaaattataatg 34232854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 20805249 - 20805197
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  20805249 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 20805197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 34684917 - 34684955
Alignment:
Q  277 gtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  34684917 gtagtctttattacgtagcttattataaaaattataatg 34684955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 12432517 - 12432558
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataa 304  Q
    ||||||| ||||| |||||||||||||| |||||||||||||    
T  12432517 ggaataaagggatagtagtctttattacgtagcttattataa 12432558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 10856385 - 10856333
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| ||||| |||||||| |||||||||||||||||| |||||    
T  10856385 ggaataaaaggattgtagtatttattacgtagcttattataaaaattataatg 10856333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 4038231 - 4038283
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  4038231 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 4038283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 5040025 - 5039973
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  5040025 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 5039973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 9887249 - 9887197
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  9887249 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 9887197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 10728087 - 10728035
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||    
T  10728087 ggaataaagggatagtagtatttattacgtagcttattataaaaattgtaatg 10728035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 13111626 - 13111678
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  13111626 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 13111678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 15521736 - 15521684
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  15521736 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 15521684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 16487139 - 16487087
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  16487139 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 16487087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 17263637 - 17263689
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  17263637 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 17263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 18710420 - 18710368
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  18710420 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 18710368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 28382564 - 28382616
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  28382564 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 28382616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 36999746 - 36999694
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  36999746 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 36999694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 37356426 - 37356374
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  37356426 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 37356374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 40024826 - 40024878
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  40024826 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 40024878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 41323013 - 41322961
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41323013 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 41322961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 43135867 - 43135815
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  43135867 ggaataaagggatagtagtctttattacgtagcttattataaaaattataatg 43135815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 4385417 - 4385468
Alignment:
Q  264 gaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||| ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  4385417 gaataaagggatagtagtctttattacgtagattattataaaaattgtaatg 4385468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 4453406 - 4453457
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaat 314  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  4453406 ggaataaagggatagtagtctttattacgtagcttattataaaaattataat 4453457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 8815477 - 8815431
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaatt 309  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  8815477 ggaataaagggatagtagtctttattacgtagcttattataaaaatt 8815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 650664 - 650716
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||| |||||    
T  650664 ggaataaagggatagtagtctttattacgtagtttattataaaaattataatg 650716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 2546208 - 2546260
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  2546208 ggaataaagggatattagtctttattacgtagcttattataaaaattataatg 2546260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 6153369 - 6153405
Alignment:
Q  279 agtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6153369 agtctttattacgtagcttattataaaaattgtaatg 6153405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 18212363 - 18212311
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  18212363 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 18212311  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 21865504 - 21865452
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| |||||||||||||| ||| |||||||||||||| |||||    
T  21865504 ggaataaagggatagtagtctttattacgtagtttattataaaaattataatg 21865452  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 31616277 - 31616329
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  31616277 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 31616329  T

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Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 36712420 - 36712472
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  36712420 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 36712472  T

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Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 39168008 - 39167956
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||  |||| |||||||||||||| |||||||||||||||||| |||||    
T  39168008 ggaataaatggatagtagtctttattacgtagcttattataaaaattataatg 39167956  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 38578899 - 38578937
Alignment:
Q  277 gtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  38578899 gtagtctttattacgtagcttattataaaaattataatg 38578937  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 2266035 - 2266088
Alignment:
Q  263 ggaataaggggatggtagtcttt-attacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  2266035 ggaataaagggatagtagtcttttattacgtagcttattataaaaattataatg 2266088  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 3377634 - 3377597
Alignment:
Q  278 tagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  3377634 tagtctttattacgtagcttattataaaaattataatg 3377597  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 8340237 - 8340184
Alignment:
Q  263 ggaataaggggatggta-gtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||| ||||||||||| || |||||||||||||||||||||    
T  8340237 ggaataaagggatagtacgtctttattacgtaacttattataaaaattgtaatg 8340184  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 10839463 - 10839516
Alignment:
Q  263 ggaataaggggatggtagtcttt-attacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  10839463 ggaataaagggatagtagtcttttattacgtagcttattataaaaattataatg 10839516  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 13527788 - 13527840
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||  |||||||||||||||||| |||||    
T  13527788 ggaataaagggataatagtctttattatgtagcttattataaaaattataatg 13527840  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 43507446 - 43507498
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| ||||| ||||| ||||||||  ||||||||||||||||| |||||    
T  43507446 ggaataaagggatagtagtttttattacgcagcttattataaaaattataatg 43507498  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Complemental strand, 7314 - 7264
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  7314 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 7264  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 315
Target Start/End: Original strand, 126649 - 126699
Alignment:
Q  265 aataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  126649 aataaagggatagtagtctttattacgtagcttattataaaaattataatg 126699  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 431517 - 431465
Alignment:
Q  263 ggaataaggggatggtagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||| |||||    
T  431517 ggaataaagggataatagtctttattacgtagcttattataaaaattataatg 431465  T

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Target: scaffold0087 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 52929 - 52967
Alignment:
Q  277 gtagtctttattacatagcttattataaaaattgtaatg 315  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  52929 gtagtctttattacgtagcttattataaaaattataatg 52967  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Complemental strand, 22839 - 22802
Alignment:
Q  278 tagtctttattacatagcttattataaaaattgtaatg 315  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  22839 tagtctttattacgtagcttattataaaaattataatg 22802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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