View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16655_high_9 (Length: 226)
Name: NF16655_high_9
Description: NF16655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16655_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 33943798 - 33943568
Alignment:
| Q |
1 |
tattctttcaaaactgagacttcacacttgattggtggtaggagtgttaatatcatttcaannnnnnnaaacatgtcatctacatcaaaccaaaccgcgt |
100 |
Q |
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| T |
33943798 |
tattctttcaaaactgagacttcacacttgattggtggtaggagtgttaatatcatttcaatttttttaaacgtgtcatctacatcaaaccaaaccgcgt |
33943699 |
T |
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| Q |
101 |
ataattttatatttggagatgatgttcttttttgctttaaacacagttcaaaatgcacaacaaacacttctaattagtggc-----atatgatatgtttc |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33943698 |
ataattttatatttggagatgatgttcttttttgctttaaacacagttcaaaatgcacaacaaacacttctaattagtggcatataatatgatatgtttc |
33943599 |
T |
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| Q |
196 |
aagatgggttttattgttcatgatgtccatc |
226 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
33943598 |
aagatgggttttattgttcatgatgtccatc |
33943568 |
T |
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