View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16656_high_8 (Length: 292)
Name: NF16656_high_8
Description: NF16656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16656_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 8 - 276
Target Start/End: Original strand, 6507098 - 6507366
Alignment:
| Q |
8 |
tgagatgaataggtagttgaagagacatcttgagttgtcattagtccatagcttggaatttcactccttggtggttggttaaaaatagctgaaagttcat |
107 |
Q |
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| T |
6507098 |
tgagaagaataggtagttgaagagacatcttgagttgtcattagtccatagcttggaatttcactccttggtggttggttaaaaatagctgaaagttcat |
6507197 |
T |
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| Q |
108 |
tgtaattgcaatcccataatccttcactataatcacttgtgttaatgttatatgcttcttgagagaatggagtgtagtcaaaaaatgattgaccatgcat |
207 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6507198 |
tgtaattgcaatcccataatccttcactataattacttgtgttaatgttatatgcttcttgagagaatggagtgtagtcaaaaaatgattgaccatgcat |
6507297 |
T |
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| Q |
208 |
gaagtttgttgtgctaatggaatcaacaacattttggtgttcacttgaatcacttgcattactcctatg |
276 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
6507298 |
gaagtttgttgtgcaaatggaatcaacaacattttggtgttcacttgaatcacttgcattactactatg |
6507366 |
T |
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