View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16658_high_34 (Length: 276)
Name: NF16658_high_34
Description: NF16658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16658_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 32667112 - 32667354
Alignment:
| Q |
20 |
aataataaggcgataccgtagacgtggcgccggccttttaggtctccgaggcgtccgaataggagctgaccgaaggcggttcctaggagtgcgacggaga |
119 |
Q |
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| T |
32667112 |
aataataaggcgataccgtagacgtggcgccggccttttaggtctccgaggcgtccgaataggagctgaccgaaggcggttcctaggagtgcaacggaga |
32667211 |
T |
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| Q |
120 |
caagagctgagaccacgaccgggttgacttgacggatttcttggtggtcagagtagtatattcttcctagcatctttgtgatgagtgtgatggagaagag |
219 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || |
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| T |
32667212 |
caagggctgagaccacgaccgggttgacttgacggatttcttggtggtcggagtagtatattcttcctagcatctttgtgatgagtgtgatggaaaaaag |
32667311 |
T |
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| Q |
220 |
gtcataagagtcagtgaaaagtcccattcctgctatgatgatg |
262 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32667312 |
gtcataagagtcagtgaaaagtcccattcctgctatgatgatg |
32667354 |
T |
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