View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16658_low_31 (Length: 319)
Name: NF16658_low_31
Description: NF16658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16658_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 39681676 - 39681491
Alignment:
| Q |
14 |
cataggtaatttctcttcttcttgaactgttgtgttgaacatataagttgttagagaacaaaatggtgaactcacactcagcaaaacaaaagaaagagtg |
113 |
Q |
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| T |
39681676 |
cataggtaatttctcttcttcttgaactgttgtgttgaacatataagttgttagagaacaaaatggtgaactcacactcagcaaaacaaaagaaagagtg |
39681577 |
T |
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| Q |
114 |
tatcaaagaattgcagaatattgcacttgttttagtttcacacaagtaaactcacttctgactcaatcaactaactacaatactaataga |
203 |
Q |
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| T |
39681576 |
tatcaaagaattgtagaatattgcacttgttttagtttcatacaagtaaactcacttctgac----tcaactaactacaatactaataga |
39681491 |
T |
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