View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16661_low_62 (Length: 226)

Name: NF16661_low_62
Description: NF16661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16661_low_62
NF16661_low_62
[»] chr5 (13 HSPs)
chr5 (1-132)||(41334571-41334702)
chr5 (1-136)||(2614553-2614688)
chr5 (1-132)||(18034043-18034174)
chr5 (1-134)||(5257056-5257189)
chr5 (1-136)||(33801530-33801665)
chr5 (1-107)||(22512366-22512472)
chr5 (1-126)||(38470640-38470765)
chr5 (1-133)||(7617194-7617326)
chr5 (34-133)||(25914903-25915002)
chr5 (1-76)||(39122397-39122472)
chr5 (27-142)||(39122254-39122369)
chr5 (60-132)||(30622627-30622699)
chr5 (60-131)||(32473303-32473374)
[»] chr8 (24 HSPs)
chr8 (1-135)||(11582827-11582961)
chr8 (1-135)||(36743388-36743522)
chr8 (1-128)||(29800862-29800989)
chr8 (1-133)||(30660649-30660781)
chr8 (1-132)||(2547057-2547188)
chr8 (1-131)||(42197344-42197474)
chr8 (1-133)||(20148821-20148953)
chr8 (2-133)||(30912469-30912600)
chr8 (1-132)||(31384725-31384856)
chr8 (1-126)||(29705423-29705548)
chr8 (1-132)||(9241613-9241744)
chr8 (1-131)||(26125696-26125825)
chr8 (1-126)||(2165877-2166002)
chr8 (1-134)||(45397377-45397509)
chr8 (1-132)||(3743832-3743963)
chr8 (1-132)||(42295256-42295386)
chr8 (1-133)||(1375603-1375735)
chr8 (1-104)||(5754964-5755067)
chr8 (3-132)||(40528542-40528671)
chr8 (60-134)||(35181636-35181710)
chr8 (60-133)||(34304908-34304980)
chr8 (1-36)||(42699318-42699353)
chr8 (60-105)||(18066653-18066698)
chr8 (60-132)||(10678060-10678132)
[»] chr7 (26 HSPs)
chr7 (1-135)||(24000917-24001051)
chr7 (1-126)||(42538345-42538470)
chr7 (1-133)||(5810831-5810963)
chr7 (1-132)||(41861737-41861868)
chr7 (1-132)||(26898310-26898441)
chr7 (1-126)||(27393174-27393299)
chr7 (1-133)||(16180264-16180396)
chr7 (1-133)||(44326239-44326371)
chr7 (1-128)||(5015456-5015583)
chr7 (1-134)||(44416840-44416973)
chr7 (1-133)||(4638106-4638238)
chr7 (1-137)||(42972913-42973049)
chr7 (1-132)||(43343532-43343663)
chr7 (1-126)||(32029731-32029856)
chr7 (1-133)||(45326081-45326213)
chr7 (1-132)||(10573810-10573941)
chr7 (1-133)||(35069782-35069914)
chr7 (1-132)||(43317504-43317635)
chr7 (1-108)||(38160511-38160618)
chr7 (1-126)||(9216362-9216487)
chr7 (1-132)||(5194139-5194270)
chr7 (1-132)||(24280504-24280635)
chr7 (20-133)||(47279631-47279744)
chr7 (60-134)||(40237039-40237113)
chr7 (60-133)||(31408540-31408613)
chr7 (60-133)||(31513407-31513480)
[»] chr6 (17 HSPs)
chr6 (1-126)||(9698247-9698372)
chr6 (1-134)||(21293583-21293716)
chr6 (1-133)||(26669916-26670048)
chr6 (1-128)||(7292808-7292935)
chr6 (1-131)||(13743130-13743260)
chr6 (1-131)||(13748630-13748760)
chr6 (1-133)||(3213461-3213593)
chr6 (1-133)||(21279990-21280122)
chr6 (1-126)||(7367610-7367735)
chr6 (2-133)||(26466861-26466992)
chr6 (1-132)||(30736043-30736174)
chr6 (1-138)||(24203889-24204026)
chr6 (1-133)||(7273242-7273374)
chr6 (1-131)||(30014404-30014534)
chr6 (60-133)||(27441662-27441735)
chr6 (60-132)||(33242523-33242595)
chr6 (60-143)||(33254034-33254118)
[»] chr3 (24 HSPs)
chr3 (1-134)||(46941114-46941247)
chr3 (1-133)||(54246055-54246187)
chr3 (1-133)||(36150191-36150323)
chr3 (1-133)||(42394326-42394458)
chr3 (1-132)||(53581766-53581897)
chr3 (1-132)||(54237157-54237288)
chr3 (1-132)||(40808926-40809057)
chr3 (1-132)||(24688310-24688441)
chr3 (1-132)||(40480810-40480941)
chr3 (1-132)||(45126836-45126967)
chr3 (1-134)||(52629889-52630022)
chr3 (1-133)||(47190933-47191065)
chr3 (1-124)||(42100749-42100872)
chr3 (1-143)||(25413742-25413886)
chr3 (1-132)||(27748624-27748746)
chr3 (1-131)||(51249369-51249499)
chr3 (34-133)||(1078312-1078411)
chr3 (42-133)||(29556866-29556956)
chr3 (1-133)||(11064629-11064761)
chr3 (1-79)||(53273645-53273723)
chr3 (60-133)||(4190172-4190245)
chr3 (60-132)||(9434244-9434316)
chr3 (54-129)||(19148882-19148957)
chr3 (64-112)||(45058584-45058632)
[»] chr1 (17 HSPs)
chr1 (1-132)||(5489837-5489968)
chr1 (1-132)||(48498870-48499001)
chr1 (1-132)||(23989431-23989562)
chr1 (1-132)||(43570994-43571125)
chr1 (1-134)||(4401389-4401522)
chr1 (1-131)||(37814839-37814969)
chr1 (1-138)||(2497464-2497601)
chr1 (1-133)||(7447886-7448018)
chr1 (1-133)||(24769406-24769538)
chr1 (1-134)||(50448166-50448299)
chr1 (1-133)||(750212-750344)
chr1 (1-136)||(4888104-4888238)
chr1 (60-133)||(44112797-44112870)
chr1 (62-112)||(47748463-47748513)
chr1 (60-132)||(35000021-35000093)
chr1 (60-133)||(35003414-35003487)
chr1 (60-132)||(45705945-45706017)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-133)||(746-878)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-133)||(112716-112848)
[»] chr4 (31 HSPs)
chr4 (1-133)||(27550370-27550502)
chr4 (1-132)||(27893750-27893881)
chr4 (1-133)||(27864625-27864757)
chr4 (1-133)||(55966253-55966385)
chr4 (2-132)||(43514594-43514724)
chr4 (1-134)||(23036041-23036174)
chr4 (1-133)||(28982729-28982861)
chr4 (1-129)||(48463361-48463489)
chr4 (1-132)||(33703202-33703333)
chr4 (1-132)||(35017793-35017924)
chr4 (1-134)||(31680963-31681096)
chr4 (1-133)||(1771173-1771305)
chr4 (1-132)||(23204686-23204817)
chr4 (1-132)||(43949709-43949840)
chr4 (1-133)||(43735803-43735935)
chr4 (1-132)||(25051754-25051885)
chr4 (1-132)||(51512173-51512304)
chr4 (3-133)||(28988536-28988665)
chr4 (3-134)||(41327449-41327580)
chr4 (1-133)||(21687067-21687199)
chr4 (1-108)||(39631162-39631269)
chr4 (1-126)||(12497017-12497142)
chr4 (1-135)||(27316617-27316752)
chr4 (9-128)||(45490225-45490344)
chr4 (1-133)||(41878467-41878592)
chr4 (3-127)||(41848034-41848158)
chr4 (1-134)||(56215804-56215936)
chr4 (1-120)||(46412389-46412508)
chr4 (60-133)||(19880074-19880147)
chr4 (60-132)||(55272284-55272356)
chr4 (60-136)||(3756156-3756232)
[»] chr2 (24 HSPs)
chr2 (1-133)||(19047218-19047350)
chr2 (1-135)||(4764631-4764765)
chr2 (1-133)||(30838693-30838825)
chr2 (1-133)||(43490308-43490440)
chr2 (1-144)||(42849754-42849897)
chr2 (1-132)||(1750475-1750606)
chr2 (1-132)||(43335671-43335802)
chr2 (1-126)||(12302167-12302292)
chr2 (1-132)||(16096808-16096940)
chr2 (1-99)||(13780676-13780774)
chr2 (3-133)||(34817683-34817813)
chr2 (1-108)||(42026830-42026937)
chr2 (1-79)||(8896544-8896622)
chr2 (1-137)||(39149197-39149331)
chr2 (60-133)||(34895648-34895721)
chr2 (60-132)||(11825562-11825634)
chr2 (60-132)||(16804088-16804160)
chr2 (60-132)||(16843370-16843442)
chr2 (60-132)||(43114677-43114749)
chr2 (60-133)||(6518401-6518474)
chr2 (60-142)||(18491825-18491907)
chr2 (60-132)||(4299328-4299400)
chr2 (60-133)||(41281881-41281954)
chr2 (60-132)||(966742-966814)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-132)||(14097-14227)
scaffold0187 (1-132)||(24425-24555)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-132)||(11312-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-126)||(23335-23460)
[»] scaffold0003 (1 HSPs)
scaffold0003 (60-133)||(45626-45699)


Alignment Details
Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 41334702 - 41334571
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  41334702 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtat 41334603  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  ||||||||||||||||||||||    
T  41334602 tgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 2614688 - 2614553
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  2614688 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 2614589  T
Q  101 tgccacataaggtggtacatgtatcaccactctatt 136  Q
    |||||||| |||||||||||||||||  ||||||||    
T  2614588 tgccacatgaggtggtacatgtatcattactctatt 2614553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18034043 - 18034174
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  18034043 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtat 18034142  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||| ||  |||||||||||||||| |||||    
T  18034143 tgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 5257056 - 5257189
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| ||||||    
T  5257056 atattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtat 5257155  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  ||||||||||||||||||||||||    
T  5257156 tgccacatggggtggtacatgtatcaccactcta 5257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 33801530 - 33801665
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  33801530 atattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtat 33801629  T
Q  101 tgccacataaggtggtacatgtatcaccactctatt 136  Q
    ||||||||  |  ||||||| ||||| |||||||||    
T  33801630 tgccacatgggaaggtacatatatcatcactctatt 33801665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22512366 - 22512472
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||| ||||||    
T  22512366 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 22512465  T
Q  101 tgccaca 107  Q
    |||||||    
T  22512466 tgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 38470640 - 38470765
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||| || |||| | |||||||||||| ||||||||||| ||||||    
T  38470640 atattttggtaaattcatttcacaatcacactttatcttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgtat 38470739  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||| || |||||||||||||||||    
T  38470740 tgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7617194 - 7617326
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| || | |||| |||||||||||||||| | | ||||||||  ||||||    
T  7617194 atattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgtat 7617293  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||| ||||||||||| ||||||    
T  7617294 tgccacatggggtgatacatgtatcatcactct 7617326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 25915002 - 25914903
Alignment:
Q  34 tatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||  |||||||||||||| ||||||||||||||||| ||||||    
T  25915002 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 39122472 - 39122397
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaat 76  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  39122472 atattttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaat 39122397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 39122369 - 39122254
Alignment:
Q  27 cacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatca 126  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| || | ||| ||||||   | ||||| |||||  ||||||||||||||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  127 ccactctattatatat 142  Q
    ||||||| | ||||||    
T  39122269 ccactctttaatatat 39122254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 30622699 - 30622627
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||||||| |||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 30622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccact 131  Q
    |||||||||||||||||||| | |||||||||   ||||||||||||||  |||| |||||||||||||||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggt-gtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 9e-54; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11582827 - 11582961
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  11582827 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 11582926  T
Q  101 tgccacataaggtggtacatgtatcaccactctat 135  Q
    |||||||| |||||||||||||||||  |||||||    
T  11582927 tgccacatgaggtggtacatgtatcattactctat 11582961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36743522 - 36743388
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||  ||||||    
T  36743522 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtat 36743423  T
Q  101 tgccacataaggtggtacatgtatcaccactctat 135  Q
    ||||||||  |||||||||||||||| ||||||||    
T  36743422 tgccacatggggtggtacatgtatcatcactctat 36743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29800989 - 29800862
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| ||||||    
T  29800989 atattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtat 29800890  T
Q  101 tgccacataaggtggtacatgtatcacc 128  Q
    ||||||||  ||||||||||||||||||    
T  29800889 tgccacatggggtggtacatgtatcacc 29800862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 30660781 - 30660649
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||||||    
T  30660781 atattttggtaagttcatcttacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgtat 30660682  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||| | || ||||||||||| ||||||    
T  30660681 tgccacataggatgatacatgtatcatcactct 30660649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 2547057 - 2547188
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  2547057 atattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 2547156  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||| |||||||||||||||| |||||    
T  2547157 tgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 42197474 - 42197344
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| | ||||||||||| ||||||    
T  42197474 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtat 42197375  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||  |||||||||||||||| ||||    
T  42197374 tgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 20148821 - 20148953
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  20148821 atattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 20148920  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||   ||||||||||||||||||||||    
T  20148921 tgccacatggtgtggtacatgtatcaccactct 20148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 30912600 - 30912469
Alignment:
Q  2 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtatt 101  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||| |||||||    
T  30912600 tattttggtaagttcatctcacaaccgcaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtatt 30912501  T
Q  102 gccacataaggtggtacatgtatcaccactct 133  Q
    |||||||  |||||||||||||||| ||||||    
T  30912500 gccacatggggtggtacatgtatcatcactct 30912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31384725 - 31384856
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||| || |||    
T  31384725 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatat 31384824  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||| ||||| |||||    
T  31384825 tgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 29705423 - 29705548
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  29705423 atattttgataagttcatctcacaaccacactttatcttctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 29705522  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||||||  ||||||||||||||||    
T  29705523 tgccacatggggtggtacatgtatca 29705548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9241613 - 9241744
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||| |||| |||| |    
T  9241613 atatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgcaaagggtgtgt 9241712  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  9241713 tgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26125696 - 26125825
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||  |||||||||| ||||||    
T  26125696 atattttggtaagttcatctcacaaccacactttatcttctatttatgtggg-tccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtat 26125794  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||  |||||||||| ||||||||||    
T  26125795 tgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2166002 - 2165877
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||| ||||||    
T  2166002 atattttggtaagttcatctcataaccacactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 2165903  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    || |||||  | ||||||||||||||    
T  2165902 tgtcacatgggatggtacatgtatca 2165877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 45397377 - 45397509
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||| | ||||||||||| |||| |    
T  45397377 atatttttgtaagttcatctcacaaccacaatttatcttctatttgtgtgggctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtgt 45397476  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  |||||||||||||||| |||||||    
T  45397477 tgccacat-gggtggtacatgtatcatcactcta 45397509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 3743832 - 3743963
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  3743832 atattttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 3743931  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||| ||||  |||||||||| ||||| |||||    
T  3743932 tgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 42295256 - 42295386
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| | ||| ||||||| || |||    
T  42295256 atattttggtaagttcatctcacaaccacactttatcttctatttatgt-gggtccaagttgccacatgtcagaattttgtgtggatgtaaagggtatat 42295354  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||| | |||||||| ||||| |||||    
T  42295355 tgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 1375603 - 1375735
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||| || ||| ||||||| ||| ||||| || | |||||||||||  |||||    
T  1375603 atattttggtaaatttatctcacaactacactttatcttctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgtat 1375702  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    || |||||| |||||||||||||||||||||||    
T  1375703 tgtcacatagggtggtacatgtatcaccactct 1375735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5754964 - 5755067
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||| |||||||| | ||||||||||| ||||||    
T  5754964 atattttggtaagttcatctcacaaccacactttatcttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgtat 5755063  T
Q  101 tgcc 104  Q
    ||||    
T  5755064 tgcc 5755067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 40528671 - 40528542
Alignment:
Q  3 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattg 102  Q
    |||||| ||| || |||||||||||||||||| ||||||||||||||||||| || |||| ||||||||| |||||| | ||| ||||||   | |||||    
T  40528671 attttgataaatttatctcacaaccacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattg 40528572  T
Q  103 ccacataaggtggtacatgtatcaccactc 132  Q
     ||||| |||  | ||||||||||||||||    
T  40528571 tcacatgagggtgcacatgtatcaccactc 40528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 35181636 - 35181710
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactcta 134  Q
    |||||||||||||| ||||| | |||||||||   |||||||||||||| ||||| ||||||||||||||||||||    
T  35181636 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgaaggt-gtacatgtatcaccactcta 35181710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 34304908 - 34304980
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||| |||||||||||||||||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggt-gtacatgtatcaccactct 34304980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 42699318 - 42699353
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttat 36  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42699318 atatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 18066698 - 18066653
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgcca 105  Q
    |||||||||||||||||||||| |||||||||   |||||||||||    
T  18066698 ttgccacatgtcagaattttatgtgggtgtaagaggtgtattgcca 18066653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 10678132 - 10678060
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||    |||||||||||||  ||  ||||||||||||||||||    
T  10678132 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 10678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 9e-54; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24001051 - 24000917
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  24001051 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 24000952  T
Q  101 tgccacataaggtggtacatgtatcaccactctat 135  Q
    |||||||| |||||||||||||||||  |||||||    
T  24000951 tgccacatgaggtggtacatgtatcattactctat 24000917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42538470 - 42538345
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  42538470 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 42538371  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    |||||||| |||||||||||||||||    
T  42538370 tgccacatgaggtggtacatgtatca 42538345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 5810963 - 5810831
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  5810963 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtat 5810864  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  5810863 tgccacatggggtggtacatgtatcatcactct 5810831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 41861737 - 41861868
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  41861737 atattttggtaagtttatctcacaaccacactttatcttctatttgtatggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtat 41861836  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||   |||||||||||||||||||||    
T  41861837 tgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 26898441 - 26898310
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||  ||||||    
T  26898441 atattttggtaagttcatcttacaaccacactttatattctatttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgtat 26898342  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||| | ||||||||||||||||||||    
T  26898341 tgccacataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27393299 - 27393174
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||  |||||    
T  27393299 atatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgcctcatgtcagaattttatgtgggtgtaaaggatgtat 27393200  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||||||  ||||||||||||||||    
T  27393199 tgccacatggggtggtacatgtatca 27393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 16180396 - 16180264
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||  ||||||    
T  16180396 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 16180297  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  16180296 tgccacatggggtggtacatgtatcatcactct 16180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 44326239 - 44326371
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  44326239 atattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 44326338  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||   ||||||||||||||||||||||    
T  44326339 tgccacatggtgtggtacatgtatcaccactct 44326371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5015456 - 5015583
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | || |||||||  ||||||    
T  5015456 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgtat 5015555  T
Q  101 tgccacataaggtggtacatgtatcacc 128  Q
    ||||||||  ||||||||||||||||||    
T  5015556 tgccacatggggtggtacatgtatcacc 5015583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44416973 - 44416840
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| | ||| ||||||  ||||||    
T  44416973 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtat 44416874  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    |||||||| ||||||||||||||||| |||||||    
T  44416873 tgccacatgaggtggtacatgtatcatcactcta 44416840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4638238 - 4638106
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||| || ||||| ||||||| ||||||    
T  4638238 atattttggtaagttcatctcacaaccatactttatcttctatttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgtat 4638139  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    || ||| || |||||||||||||||||||||||    
T  4638138 tgtcacgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42972913 - 42973049
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||  ||||||    
T  42972913 atattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgtat 42973012  T
Q  101 tgccacataaggtggtacatgtatcaccactctatta 137  Q
    ||||||||| | | ||||||||||||  |||||||||    
T  42973013 tgccacataggatagtacatgtatcattactctatta 42973049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43343663 - 43343532
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| | ||| ||||||  ||||||    
T  43343663 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtat 43343564  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||| ||||||||||||||||| |||||    
T  43343563 tgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 32029856 - 32029731
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  32029856 atattttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 32029757  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||||||  ||||||||||||||||    
T  32029756 tgccacatggggtggtacatgtatca 32029731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 45326081 - 45326213
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  | |||| |||||||||||||| ||||||||||  ||||||    
T  45326081 atattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgtat 45326180  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    || |||||  |||||||||||||||||||||||    
T  45326181 tgtcacatggggtggtacatgtatcaccactct 45326213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10573810 - 10573941
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||||| |||||||||||  | |||    
T  10573810 atattttggtaaattcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatatcagaattttatgtgggtgtaaaggatatat 10573909  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    || |||||  ||||||||||||||||||||||    
T  10573910 tgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 35069782 - 35069914
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||||||| | | | |||||||  | |||    
T  35069782 atattttggtaagttcatctcacaaccacactttatcttctatttatgtgaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatatat 35069881  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||| | |||||||||||||| ||||||    
T  35069882 tgccacataggatggtacatgtatcatcactct 35069914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 43317504 - 43317635
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||| |||||||||||| |||||||  |||||||||||||||||||| || |||||||||||||||||||| | ||||||||| | ||||||    
T  43317504 atattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgtat 43317603  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||| ||||  ||||||||||||||||||    
T  43317604 tgccacacaagggtgtacatgtatcaccactc 43317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38160618 - 38160511
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||||| | ||||||||| | ||||||    
T  38160618 atattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaggggtgtat 38160519  T
Q  101 tgccacat 108  Q
    ||||||||    
T  38160518 tgccacat 38160511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9216362 - 9216487
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||| |||||||||||||| | ||| ||||||  ||||||    
T  9216362 atattttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgtat 9216461  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    || |||||  ||||||| || |||||    
T  9216462 tgtcacatggggtggtatatatatca 9216487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 5194270 - 5194139
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||| |||||||||||| |||||||  |||||||||||||||||||| || ||||||||||||| |||||| | ||||||||| |  |||||    
T  5194270 atattttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcaaaattttgtgtgggtgtaagggttgtat 5194171  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||| ||||  ||||||||||||| ||||    
T  5194170 tgccacacaagggtgtacatgtatcactactc 5194139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 24280635 - 24280504
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||| || |||||||||| |  | ||||||   ||||||    
T  24280635 atattttggtaaattcatctcacaatcacactttctcttctatttgtgtggggtccaagttgccatatatcagaattttgtgcgagtgtaagaggtgtat 24280536  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    |  ||| ||| |  ||||||||||||||||||    
T  24280535 tatcacgtaaaggtgtacatgtatcaccactc 24280504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 47279744 - 47279631
Alignment:
Q  20 tcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtaca 119  Q
    |||||||||||||||||||||||||| | | || ||||| || |||||| |||||||||||| ||||| ||||| |||||||| || ||  | |||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  120 tgtatcaccactct 133  Q
    ||||||||||||||    
T  47279644 tgtatcaccactct 47279631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 40237039 - 40237113
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactcta 134  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcta 40237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 31408613 - 31408540
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||||| |||||||||   |||||||| |||||  ||  |||||||||||||||||||    
T  31408613 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgtcacatgggggtgtacatgtatcaccactct 31408540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 31513407 - 31513480
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | | | |||||   ||||||||||||||||||  |||||||||||||||||||    
T  31513407 ttgccacatgtcaggattttgtgtagatgtaagaggtgtattgccacataagggtgtacatgtatcaccactct 31513480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9698372 - 9698247
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  9698372 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 9698273  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    |||||||| |||||||||||||||||    
T  9698272 tgccacatgaggtggtacatgtatca 9698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21293716 - 21293583
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  21293716 atattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 21293617  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    |||||||| |||||||||||||||||||||||||    
T  21293616 tgccacatgaggtggtacatgtatcaccactcta 21293583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 26670048 - 26669916
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  26670048 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 26669949  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||| ||||||||||| ||||||| ||||    
T  26669948 tgccacatgaggtggtacatatatcaccgctct 26669916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7292808 - 7292935
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||||| ||||||    
T  7292808 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgtat 7292907  T
Q  101 tgccacataaggtggtacatgtatcacc 128  Q
    ||||||||  ||||||||||||||||||    
T  7292908 tgccacatggggtggtacatgtatcacc 7292935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13743260 - 13743130
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||  | |||    
T  13743260 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatat 13743161  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||| |||||||||||||||||||||    
T  13743160 tgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13748760 - 13748630
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || | |||||||||||  | |||    
T  13748760 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatat 13748661  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||| |||||||||||||||||||||    
T  13748660 tgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 3213461 - 3213593
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||    
T  3213461 atattttggtaaattcatttcacaaccatactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtat 3213560  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||||||||||    
T  3213561 tgccacatggggtggtacatgtatcaccactct 3213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21279990 - 21280122
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||| || |||    
T  21279990 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtatat 21280089  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  21280090 tgccacatggggtggtacatgtatcatcactct 21280122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7367610 - 7367735
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  7367610 atattttggtaagttcatctcacaaccacactttattttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 7367709  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||||||  ||||||||||||||||    
T  7367710 tgccacatggggtggtacatgtatca 7367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 26466861 - 26466992
Alignment:
Q  2 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtatt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||| ||||| ||||||||||||  |||||||    
T  26466861 tattttggtaagttcatctcacaaccacactttatcttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtatt 26466960  T
Q  102 gccacataaggtggtacatgtatcaccactct 133  Q
    |||||||| ||||||| |||||||| ||||||    
T  26466961 gccacatagggtggtaaatgtatcatcactct 26466992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30736043 - 30736174
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||| ||||||| ||||||    
T  30736043 atattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 30736142  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  | |||||||||||||| |||||    
T  30736143 tgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 24204026 - 24203889
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||| ||||||    
T  24204026 atattttggtaagttcatctcacaaccacactttatattctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 24203927  T
Q  101 tgccacataaggtggtacatgtatcaccactctattat 138  Q
    || |||||   ||||||||||||||| ||||| |||||    
T  24203926 tgtcacatggagtggtacatgtatcatcactcaattat 24203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 7273374 - 7273242
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  7273374 atattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtat 7273275  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    | ||||||  ||||||||||| |||| ||||||    
T  7273274 taccacatggggtggtacatgcatcatcactct 7273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30014404 - 30014534
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| ||| |||| |||||||||||| | ||| ||||||| ||||||    
T  30014404 atattttggtaagttcatctcacaaccatactttatcttctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtat 30014503  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||  |||| ||||||||||| ||||    
T  30014504 tgccacatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 27441662 - 27441735
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtg-gtacatgtatcaccactct 133  Q
    |||||||||||||| ||||||| |||||||||   ||||||||||||||  |||| |||||||||||||||||||    
T  27441662 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacat-gggtgtgtacatgtatcaccactct 27441735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 33254034 - 33254118
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactctat-tatatata 143  Q
    |||||||||||| | ||||| | ||||| ||||  ||||||||||||||  |||| ||||||||||||||||||||| ||||||||    
T  33254034 ttgccacatgtccggattttgtgtgggtataaaaggtgtattgccacatggaggt-gtacatgtatcaccactctatatatatata 33254118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 3e-53; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 46941114 - 46941247
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||    
T  46941114 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtat 46941213  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  |||||||||||||||| |||||||    
T  46941214 tgccacatggggtggtacatgtatcatcactcta 46941247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 54246187 - 54246055
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||    
T  54246187 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtat 54246088  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  54246087 tgccacatggggtggtacatgtatcatcactct 54246055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 36150191 - 36150323
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||| ||||||| ||||||    
T  36150191 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 36150290  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||||||||||    
T  36150291 tgccacatggggtggtacatgtatcaccactct 36150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 42394458 - 42394326
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| ||||||    
T  42394458 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtat 42394359  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  42394358 tgccacatggggtggtacatgtatcatcactct 42394326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 53581897 - 53581766
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  53581897 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 53581798  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||| ||||||||| |||||| |||||    
T  53581797 tgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 54237157 - 54237288
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||| ||||||    
T  54237157 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgtat 54237256  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  54237257 tgccacatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40808926 - 40809057
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||  ||||||    
T  40808926 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 40809025  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  40809026 tgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 24688441 - 24688310
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||| |||||  ||||||    
T  24688441 atattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgtat 24688342  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  24688341 tgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40480810 - 40480941
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  40480810 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 40480909  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    |||| |||  |||| ||||||||||| |||||    
T  40480910 tgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 45126967 - 45126836
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||| ||||||||||| ||||||||||| ||||||    
T  45126967 atattttggtaagttcatctcacaaccacactttattttctatttatgtggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgtat 45126868  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||   |||||||||||||||||||||    
T  45126867 tgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52629889 - 52630022
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || |||||||||||| | ||||||||||| ||||||    
T  52629889 atatttttgtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgtgtgggtgtaaagggtgtat 52629988  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  |||||||||||||||| |||||||    
T  52629989 tgccacatggggtggtacatgtatcatcactcta 52630022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 47191065 - 47190933
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||||| ||||||    
T  47191065 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtat 47190966  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||    |||||||||||||| ||||||    
T  47190965 tgccacatggaatggtacatgtatcatcactct 47190933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 42100749 - 42100872
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||| |||||||||||||| ||||||||||| ||| ||    
T  42100749 atattttggtaagttcatctcacaaccacattttatcttttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcat 42100848  T
Q  101 tgccacataaggtggtacatgtat 124  Q
    |||||||| |||||||||||||||    
T  42100849 tgccacatgaggtggtacatgtat 42100872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25413742 - 25413886
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||| | ||||||||||| ||||||    
T  25413742 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtat 25413841  T
Q  101 tgccacataaggtggtacatgtatcaccactct--attatatata 143  Q
    || || ||  |||||||||||||||| ||||||  ||||||||||    
T  25413842 tgtcatatggggtggtacatgtatcatcactctggattatatata 25413886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 27748624 - 27748746
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| | | |         ||||||    
T  27748624 atattttggtaagttcatctcacaacaatactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgtcg---------gtgtat 27748714  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  ||||||||||||||||||||||    
T  27748715 tgccacatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 51249369 - 51249499
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||  ||||| | ||||||    
T  51249369 atattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaattttgtatgaatgtaaggagtgtat 51249468  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    |  || || |||   ||||||||||||||||    
T  51249469 tatcatatgaggatatacatgtatcaccact 51249499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 1078312 - 1078411
Alignment:
Q  34 tatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||||||| |||||||||||||| ||||||||||||||||| ||||||    
T  1078312 tatcttctatttgtgtggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactct 1078411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 29556956 - 29556866
Alignment:
Q  42 atttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactct 29556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11064761 - 11064629
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| | | ||||||||| || |||||||  |||||||||||||||||||| || || |||||||||| |||||| | ||||||||| | ||||||    
T  11064761 atattttgattaattcatctcataatcacacttactcttctatttgtgtggggtctagattaccacatgtcaaaattttgtgtgggtgtaaggggtgtat 11064662  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    || |||| |||   |||||||||||||||||||    
T  11064661 tgtcacacaagagtgtacatgtatcaccactct 11064629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 53273723 - 53273645
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatttt 79  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||| |||| | ||||||||||    
T  53273723 atattttggtaagttcatctcacaaccatactttatcttttatttatgtgggatccaggttaccacgtatcagaatttt 53273645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 4190245 - 4190172
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||||||   ||||||||||||||||||    
T  4190245 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacataagggtatacatgtatcaccactct 4190172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 9434244 - 9434316
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||||||||| | |||||||||   ||||||||||||||  |   ||||||||||||||||||    
T  9434244 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 9434316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 19148882 - 19148957
Alignment:
Q  54 tccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcacca 129  Q
    |||||||||||| ||||||||||||| | |||||||||   ||||||||||||||  ||  |||||||| ||||||    
T  19148882 tccaggttgccatatgtcagaattttgtgtgggtgtaagtggtgtattgccacatgggggtgtacatgtgtcacca 19148957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 45058584 - 45058632
Alignment:
Q  64 cacatgtcagaattttatatgggtgtaaagtgtgtattgccacataagg 112  Q
    ||||||||||| |||||| ||||||| ||| |||||||||||| |||||    
T  45058584 cacatgtcagatttttatgtgggtgtcaagggtgtattgccacctaagg 45058632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5489837 - 5489968
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||    
T  5489837 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtat 5489936  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  5489937 tgccacatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 48499001 - 48498870
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||    
T  48499001 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtat 48498902  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  48498901 tgccacatggggtggtacatgtatcatcactc 48498870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23989562 - 23989431
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||||    
T  23989562 atattttggtaaatttatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgtat 23989463  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||| ||| ||||||||||||||||||||||    
T  23989462 tgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43571125 - 43570994
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||    
T  43571125 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtat 43571026  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||| ||||| |||||    
T  43571025 tgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4401389 - 4401522
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||| | ||||||||||| ||||||    
T  4401389 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 4401488  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||| |||||||||||||||| |||||||    
T  4401489 tgccacatagggtggtacatgtatcatcactcta 4401522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37814839 - 37814969
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||    
T  37814839 atattttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtat 37814938  T
Q  101 tgccacataaggtggtacatgtatcaccact 131  Q
    ||||||||  |||||||||||||||||||||    
T  37814939 tgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2497601 - 2497464
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| ||| |||||||||||||| ||||| ||||| ||||||    
T  2497601 atattttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgtat 2497502  T
Q  101 tgccacataaggtggtacatgtatcaccactctattat 138  Q
    ||||||||   |||||||||||||||||||||||||||    
T  2497501 tgccacatggtgtggtacatgtatcaccactctattat 2497464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7447886 - 7448018
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  7447886 atattttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 7447985  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||    |||||||||||||| ||||||    
T  7447986 tgccacatggaatggtacatgtatcatcactct 7448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24769538 - 24769406
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||| ||||||    
T  24769538 atattttggtaagttcttatcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgtat 24769439  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  24769438 tgccacatggggtggtacatgtatcatcactct 24769406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 50448299 - 50448166
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |||||| |||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  50448299 atatttttgtaagttcatcttacaaccacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 50448200  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  |||||||||||||||| |||||||    
T  50448199 tgccacatggggtggtacatgtatcatcactcta 50448166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 750344 - 750212
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||| | ||||||||||| ||||||    
T  750344 atattttgataaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgtat 750245  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  | |||||||||||||| ||||||    
T  750244 tgccacatgggatggtacatgtatcatcactct 750212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4888104 - 4888238
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||  ||||||  | |||||||||| | ||| |||||||  | |||    
T  4888104 atattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgtgtggatgtaaaggatatat 4888203  T
Q  101 tgccacataaggtggtacatgtatcaccactctatt 136  Q
    ||||||||  |||||||||||||||| |||||||||    
T  4888204 tgccacat-gggtggtacatgtatcatcactctatt 4888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 44112797 - 44112870
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactct 133  Q
    |||||||||||||||||||| | |||||||||   |||||||||||||| ||||| |||||||||||||||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggt-gtacatgtatcaccactct 44112870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 47748513 - 47748463
Alignment:
Q  62 gccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataagg 112  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||| |||||    
T  47748513 gccacatgtcagatttttatatgggtgtcaagggtgtattgccacctaagg 47748463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 35000093 - 35000021
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| |||||||||||    |||||||||||||  ||  ||||||||||||||||||    
T  35000093 ttgccacatgtcaggattttgtatgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 35000021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 35003414 - 35003487
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  || ||||||||||||||||    
T  35003414 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtgcatgtatcaccactct 35003487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 45705945 - 45706017
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  |||| ||||||||||||||||||    
T  45705945 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggt-gtacatgtatcaccactc 45706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 746 - 878
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  746 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 845  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||| ||||||||||| ||||||| ||||    
T  846 tgccacatgaggtggtacatatatcaccgctct 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 112716 - 112848
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| ||||||    
T  112716 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtat 112815  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  112816 tgccacatggggtggtacatgtatcatcactct 112848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 27550370 - 27550502
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  27550370 atattttggtaagttcatcttacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtat 27550469  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  27550470 tgccacatggggtggtacatgtatcatcactct 27550502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27893881 - 27893750
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| ||||||    
T  27893881 atattttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtat 27893782  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  ||||||||||||||||||||||    
T  27893781 tgccacatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 27864625 - 27864757
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| || ||||||||||||||||||| ||| ||||||| ||||||    
T  27864625 atattttggtaagttcatctcacaaccacactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgtat 27864724  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||||||||||    
T  27864725 tgccacatggggtggtacatgtatcaccactct 27864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 55966385 - 55966253
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||| |||||||||||||| ||||||||||| ||||||    
T  55966385 atattttggtaagttcatctcacaaccacaatttatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgtat 55966286  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||   ||||||||||||||||||||||    
T  55966285 tgccacatggagtggtacatgtatcaccactct 55966253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 43514724 - 43514594
Alignment:
Q  2 tattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtatt 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| | ||| ||||||| |||||||    
T  43514724 tattttggtaagttcatctcacaaccacaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtatt 43514625  T
Q  102 gccacataaggtggtacatgtatcaccactc 132  Q
    |||||||  |||||||||||||||| |||||    
T  43514624 gccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23036041 - 23036174
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||  ||| |    
T  23036041 atatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtgt 23036140  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  |||||||||||||||| |||||||    
T  23036141 tgccacatggggtggtacatgtatcatcactcta 23036174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 28982861 - 28982729
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||  ||||||    
T  28982861 atattttggtaagttcatctcacaaccgcactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 28982762  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  28982761 tgccacatggggtggtacatgtatcatcactct 28982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48463489 - 48463361
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||| || ||||||||||||||||||| ||||||||||| ||||||    
T  48463489 atattttggtaagttcatctcacaaccatactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgtat 48463390  T
Q  101 tgccacataaggtggtacatgtatcacca 129  Q
    |||||||||  ||||||||||||||||||    
T  48463389 tgccacatagagtggtacatgtatcacca 48463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 33703202 - 33703333
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  33703202 atattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 33703301  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||| ||  |||||||||||||||| |||||    
T  33703302 tgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 35017793 - 35017924
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||   |||||    
T  35017793 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtat 35017892  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  35017893 tgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31680963 - 31681096
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||| |||||||||||||| | ||||||||| ||||||    
T  31680963 atattttggtaagttcatctcacaaccacactttatcttctatttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaagggtgtat 31681062  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
    ||||||||  | || |||||||||||||||||||    
T  31681063 tgccacatgggatgctacatgtatcaccactcta 31681096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 1771305 - 1771173
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| | |||||||||| | ||||||||||| ||||||    
T  1771305 atattttgataagttcatctcacaaccacattttatcttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtat 1771206  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  1771205 tgccacatggggtggtacatgtatcatcactct 1771173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23204817 - 23204686
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||  | |||    
T  23204817 atatttttgtaagttcatgtcacaaccacactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatatat 23204718  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  | |||||| ||||||| |||||    
T  23204717 tgccacatgggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43949840 - 43949709
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||   |||||| |||||||||||| ||||||| ||||| ||||||    
T  43949840 atattttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaattttgtatgggtataaagggtgtat 43949741  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||| ||| |||||||||||||||| |||||    
T  43949740 tgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43735803 - 43735935
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||| |||||||||||||| ||| ||||||| ||||||    
T  43735803 atattttgataagttcatctcacaatcacactttatcttctatttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgtat 43735902  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    |||||| |  |||||||||||||||| ||||||    
T  43735903 tgccacgtggggtggtacatgtatcatcactct 43735935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25051754 - 25051885
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||| | ||| ||||||   |||||    
T  25051754 atattttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgtat 25051853  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    |||||| |  |||||||||||||||| |||||    
T  25051854 tgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 51512304 - 51512173
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||| | ||   |||||    
T  51512304 atattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtattaaagatgtat 51512205  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    |||||| |  |||||||||||||||| |||||    
T  51512204 tgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 28988536 - 28988665
Alignment:
Q  3 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattg 102  Q
    |||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| | |||| | ||||||||    
T  28988536 attttgataaattcatctcataaccacactttctcttctatttgtgtggggtccaggttgccatatgtcagaattttgtatgag-gtaaggggtgtattg 28988634  T
Q  103 ccacataaggtggtacatgtatcaccactct 133  Q
     ||||| |||  |||||||||||||||||||    
T  28988635 tcacatgagggtgtacatgtatcaccactct 28988665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 41327580 - 41327449
Alignment:
Q  3 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattg 102  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | || |||||| | ||||||||    
T  41327580 attttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattg 41327481  T
Q  103 ccacataaggtggtacatgtatcaccactcta 134  Q
    ||| || | |  ||||||||||||| ||||||    
T  41327480 ccagattaagatgtacatgtatcactactcta 41327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21687067 - 21687199
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||| ||| || ||||||||||| |||||||||||| | ||  |||||||  |||||    
T  21687067 atattttagtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtat 21687166  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||| | |||||||| ||||| ||||||    
T  21687167 tgccacataggttggtacatatatcatcactct 21687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39631162 - 39631269
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   || ||| |||||||||||| | |||||||||||  |||||    
T  39631162 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaattttgtgtgggtgtaaaggatgtat 39631261  T
Q  101 tgccacat 108  Q
    || |||||    
T  39631262 tgtcacat 39631269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12497017 - 12497142
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||  ||||||| ||| |||||||| | ||||||||||  ||||||    
T  12497017 atattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtat 12497116  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    || |||||  |||||| |||||||||    
T  12497117 tgtcacatggggtggtgcatgtatca 12497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27316752 - 27316617
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaa-ttttatatgggtgtaaagtgtgta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| |||||||| |||||||| |||| | ||| ||||||| |||||    
T  27316752 atattttggtaagttcatctcataaccacactttatcttctatttatttggagtccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgta 27316653  T
Q  100 ttgccacataaggtggtacatgtatcaccactctat 135  Q
    ||| |||||  | || || |||||||| ||||||||    
T  27316652 ttgtcacatgggatgataaatgtatcatcactctat 27316617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 45490344 - 45490225
Alignment:
Q  9 gtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat 108  Q
    |||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||||| || | ||||||||||   | |||||||||||    
T  45490344 gtaaattcatctcacaaccacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatatattgccacat 45490245  T
Q  109 aaggtggtacatgtatcacc 128  Q
    | |||  |||||||||||||    
T  45490244 agggtactacatgtatcacc 45490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 41878467 - 41878592
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||||||||||||||||||| || || ||||||||||||||||||||||| ||| ||| |||||||||||| | | ||||||||| ||||||    
T  41878467 atattttgataagttcatctcacaaccaaaccttctcttctatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaagagtgtat 41878566  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
           | ||||||||||||||||||||||||    
T  41878567 -------tcaggtggtacatgtatcaccactct 41878592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 41848034 - 41848158
Alignment:
Q  3 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattg 102  Q
    ||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||||   ||| ||||| | ||||||||    
T  41848034 attttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaaggggtgtattg 41848133  T
Q  103 ccacataaggtggtacatgtatcac 127  Q
    ||||||  ||  |||||||||||||    
T  41848134 ccacatgggggtgtacatgtatcac 41848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 56215936 - 56215804
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||| || || |||||||||||||||||| ||| |||||||||||||||| ||||||| | ||||||||||||| | |||||||||   ||||||    
T  56215936 atattttggaaaatttatctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtgtaagaggtgtat 56215838  T
Q  101 tgccacataaggtggtacatgtatcaccactcta 134  Q
     |||||||   |  ||||||||||||||||||||    
T  56215837 ggccacatggtggtgtacatgtatcaccactcta 56215804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 46412508 - 46412389
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |  ||||||| |||||||||||| | | | ||||||  || |||    
T  46412508 atattttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaaaagtatat 46412409  T
Q  101 tgccacataaggtggtacat 120  Q
    || || ||| ||||||||||    
T  46412408 tgtcatatagggtggtacat 46412389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 19880074 - 19880147
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  |||||||||||||||||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 19880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 55272356 - 55272284
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 55272284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 3756232 - 3756156
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaa-agtgtgtattgccacataaggtggtacatgtatcaccactctatt 136  Q
    |||||||||||||  ||||||| ||||||||| ||| |||||||||||||  |   ||||||||||||||||||||||    
T  3756232 ttgccacatgtcatgattttatgtgggtgtaagagt-tgtattgccacatgggagtgtacatgtatcaccactctatt 3756156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 19047218 - 19047350
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| ||||||    
T  19047218 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtat 19047317  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  19047318 tgccacatggggtggtacatgtatcatcactct 19047350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4764765 - 4764631
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||  ||||||    
T  4764765 atattttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtat 4764666  T
Q  101 tgccacataaggtggtacatgtatcaccactctat 135  Q
    |||||||| ||||||||||||||||| ||||||||    
T  4764665 tgccacatgaggtggtacatgtatcatcactctat 4764631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 30838693 - 30838825
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | | ||||||||  ||||||    
T  30838693 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgtat 30838792  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    ||||||||  |||||||||||||||| ||||||    
T  30838793 tgccacatggggtggtacatgtatcatcactct 30838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 43490440 - 43490308
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||    
T  43490440 atattttggtaagttcatctcataaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtat 43490341  T
Q  101 tgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||| |||||||||||||| || ||||||    
T  43490340 tgccacatgaggtggtacatgtagcatcactct 43490308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42849897 - 42849754
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  42849897 atattttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtat 42849799  T
Q  101 tgccacataaggtggtacatgtatcaccactctat-tatatatat 144  Q
    ||||||||  |||||||||||||||| |||| ||| |||||||||    
T  42849798 tgccacatggggtggtacatgtatcatcactatatatatatatat 42849754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 1750475 - 1750606
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | || |||||||| |||| |    
T  1750475 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgt 1750574  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||  ||||| |||||    
T  1750575 tgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43335802 - 43335671
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||||| | ||| ||||||  || |||    
T  43335802 atattttggtaagttcatctcacaactacactttatcttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtatat 43335703  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  43335702 tgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 12302292 - 12302167
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||| | ||| |||||||  |||||    
T  12302292 atatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtat 12302193  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    ||||||||  |||| |||||||||||    
T  12302192 tgccacatggggtgatacatgtatca 12302167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16096808 - 16096940
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtgggg-tccaggttgccacatgtcagaattttatatgggtgtaaagtgtgta 99  Q
    |||||||||| |||| |||||||||||||||||||||||||| || ||||||| || | |||||||| |||||||||||| | ||||||||||| |||||    
T  16096808 atattttggtgagttaatctcacaaccacactttatcttctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgta 16096907  T
Q  100 ttgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||| | ||||||||||||||| |||||    
T  16096908 ttgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13780774 - 13780676
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgta 99  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  13780774 atattttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaattttgtataggtgtaaagggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 34817813 - 34817683
Alignment:
Q  3 attttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtattg 102  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||| ||||||||||| | | | ||||    
T  34817813 attttggtaaattcatctcacaaccacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattg 34817714  T
Q  103 ccacataaggtggtacatgtatcaccactct 133  Q
    ||||||  ||  |||||||||||| ||||||    
T  34817713 ccacatgggggtgtacatgtatcatcactct 34817683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42026830 - 42026937
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||||||| | ||||||||||||| | ||||||||| | ||||||    
T  42026830 atattttggcaaattcatctcacaactacactttcttttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaaggggtgtat 42026929  T
Q  101 tgccacat 108  Q
    ||||||||    
T  42026930 tgccacat 42026937  T

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Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8896622 - 8896544
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatttt 79  Q
    |||||||||||| |||||||||||| |||||||| | ||||||||||||| ||| ||||||||||||||||||||||||    
T  8896622 atattttggtaaattcatctcacaatcacactttcttttctatttgtgtgaggttcaggttgccacatgtcagaatttt 8896544  T

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Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 39149331 - 39149197
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||| |  || |||| | ||| |||||| | ||||||||||  ||||||    
T  39149331 atattttggtaagttcatcccacaactacactttatcttttatttgtgt-gggtctaaattaccacgtctcataattttgtgtgggtgtaaaaggtgtat 39149233  T
Q  101 tgccacataaggtggtacatgtatcaccactctatta 137  Q
    | ||||||  |||||||||||||||| ||||||||||    
T  39149232 taccacat-gggtggtacatgtatcatcactctatta 39149197  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 34895721 - 34895648
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  |||||||||||||||||||    
T  34895721 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 34895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 16804088 - 16804160
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||||||||| | |||||||||   |||||||| || ||| ||  ||||||||||||||||||    
T  16804088 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 16843370 - 16843442
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||||||||| | |||||||||   |||||||| || ||| ||  ||||||||||||||||||    
T  16843370 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 43114677 - 43114749
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||| |||||| ||||| | |||||||||   |||||||||||||| |||  ||||||||||||||||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtgtacatgtatcaccactc 43114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 6518474 - 6518401
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | ||||||||||  |||||||| |||||  |||| |||||||||||||||||||    
T  6518474 ttgccacatgtcaggattttgtgtgggtgtaaaaggtgtattgacacatggaggt-gtacatgtatcaccactct 6518401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 18491825 - 18491907
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactctattatatat 142  Q
    ||||||||||| || ||||| | |||||||||   ||||||||||||||  ||  ||||||||||||||||||| || |||||    
T  18491825 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactcttttttatat 18491907  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 4299400 - 4299328
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacat-aaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||    ||||||||||||| |||||| |||||||||||||||||    
T  4299400 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgaaggtg-tacatgtatcaccactc 4299328  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 41281954 - 41281881
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactct 133  Q
    |||||||||||||| ||||| | |||||||||   ||||||||||| ||  ||  |||||||||||||||||||    
T  41281954 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcaccactct 41281881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 966814 - 966742
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtggtacatgtatcaccactc 132  Q
    |||||||||||||| ||||| | |||||||||   ||||||| ||||||  ||  ||||||||||||||||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactc 966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14227 - 14097
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||||||    
T  14227 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 14129  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  14128 tgccacatggggtggtacatgtatcatcactc 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 24555 - 24425
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||||||    
T  24555 atatttttgtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtat 24457  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  |||||||||||||||| |||||    
T  24456 tgccacatggggtggtacatgtatcatcactc 24425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11312 - 11443
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| || |||||||||||| | | ||||||||  ||||||    
T  11312 atattttggtaagttcatctcacaaccacactttatcttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgtat 11411  T
Q  101 tgccacataaggtggtacatgtatcaccactc 132  Q
    ||||||||  | |||||||||||||| |||||    
T  11412 tgccacatgggatggtacatgtatcatcactc 11443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 23460 - 23335
Alignment:
Q  1 atattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatatgggtgtaaagtgtgtat 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||  ||||||| ||| |||||||| | ||||||||||  ||||||    
T  23460 atattttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtat 23361  T
Q  101 tgccacataaggtggtacatgtatca 126  Q
    || |||||  |||||| |||||||||    
T  23360 tgtcacatggggtggtgcatgtatca 23335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 45699 - 45626
Alignment:
Q  60 ttgccacatgtcagaattttatatgggtgtaaagtgtgtattgccacataaggtg-gtacatgtatcaccactct 133  Q
    |||||||||||||| ||||||| |||||||||   ||||||||||||||  |||| |||||||||||||||||||    
T  45699 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacat-gggtgtgtacatgtatcaccactct 45626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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