View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16661_low_65 (Length: 207)
Name: NF16661_low_65
Description: NF16661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16661_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 4597955 - 4598127
Alignment:
| Q |
8 |
tagcattatacaaactgctccaatctggttcattgacactgaagcacaacaaatactcttcaagtgaaagaaaaactattacacagactaactcgcaacc |
107 |
Q |
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| T |
4597955 |
tagcattatacaaactgttccaatctggttcattgacactgaagcacaacaaatattctttgactgaaagaaaaactattacacagactaactcacaatc |
4598054 |
T |
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| Q |
108 |
aatacaaacaaaacaaaatgaaatatctaatactttcagagagaaaaagcatataccacttagagaatcctta |
180 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
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| T |
4598055 |
aatacaaacaaaacaaaatgaaatatctaatactttaagagggaaaaagcatataccacttagagaatcctta |
4598127 |
T |
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