View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16662_low_3 (Length: 721)

Name: NF16662_low_3
Description: NF16662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16662_low_3
NF16662_low_3
[»] chr7 (33 HSPs)
chr7 (79-716)||(6490154-6490795)
chr7 (25-94)||(598256-598325)
chr7 (25-95)||(32287405-32287475)
chr7 (25-88)||(5409773-5409836)
chr7 (25-94)||(21880200-21880269)
chr7 (25-94)||(24339701-24339770)
chr7 (25-88)||(43027406-43027469)
chr7 (25-94)||(15680857-15680926)
chr7 (25-94)||(26033392-26033461)
chr7 (25-76)||(9778571-9778622)
chr7 (25-82)||(17852060-17852117)
chr7 (25-94)||(21864856-21864925)
chr7 (25-77)||(29763131-29763183)
chr7 (25-88)||(32093956-32094020)
chr7 (25-91)||(1401076-1401140)
chr7 (25-88)||(1433513-1433576)
chr7 (36-95)||(5835294-5835353)
chr7 (25-72)||(6490786-6490833)
chr7 (20-75)||(14729770-14729825)
chr7 (25-76)||(22868113-22868164)
chr7 (25-95)||(22484072-22484142)
chr7 (27-77)||(40287306-40287356)
chr7 (25-94)||(32308179-32308248)
chr7 (28-76)||(13770762-13770810)
chr7 (34-73)||(18215148-18215187)
chr7 (43-77)||(3294264-3294298)
chr7 (25-95)||(20549838-20549908)
chr7 (36-94)||(33994260-33994318)
chr7 (28-78)||(43250068-43250118)
chr7 (45-90)||(8234198-8234243)
chr7 (26-67)||(8842282-8842323)
chr7 (24-77)||(29998973-29999026)
chr7 (20-73)||(30813866-30813919)
[»] chr6 (35 HSPs)
chr6 (148-400)||(6347534-6347786)
chr6 (148-395)||(6325316-6325563)
chr6 (148-395)||(6332272-6332519)
chr6 (531-714)||(6348351-6348534)
chr6 (531-714)||(6326115-6326298)
chr6 (531-714)||(6333071-6333254)
chr6 (25-94)||(28152146-28152215)
chr6 (25-94)||(34595182-34595251)
chr6 (25-94)||(8365450-8365519)
chr6 (25-94)||(10339056-10339125)
chr6 (25-94)||(16766756-16766825)
chr6 (25-94)||(28715343-28715412)
chr6 (26-94)||(32978842-32978910)
chr6 (26-73)||(9025448-9025495)
chr6 (25-88)||(17327592-17327655)
chr6 (25-83)||(8776910-8776968)
chr6 (25-94)||(4877991-4878059)
chr6 (25-90)||(17841531-17841596)
chr6 (25-82)||(31384990-31385047)
chr6 (25-77)||(31959215-31959267)
chr6 (25-95)||(7378026-7378096)
chr6 (26-72)||(8389411-8389457)
chr6 (25-94)||(5970039-5970108)
chr6 (25-94)||(7248417-7248486)
chr6 (19-72)||(7938170-7938223)
chr6 (25-94)||(8714039-8714108)
chr6 (25-94)||(9107301-9107370)
chr6 (25-94)||(18367895-18367964)
chr6 (25-94)||(24645529-24645598)
chr6 (25-72)||(9629464-9629511)
chr6 (42-77)||(34172253-34172288)
chr6 (36-94)||(3209447-3209505)
chr6 (25-59)||(5732476-5732510)
chr6 (45-95)||(9522949-9522999)
chr6 (25-93)||(9658928-9658997)
[»] chr1 (41 HSPs)
chr1 (1-66)||(27965918-27965983)
chr1 (25-94)||(40258875-40258944)
chr1 (23-88)||(1486644-1486709)
chr1 (25-94)||(9828103-9828172)
chr1 (25-94)||(37598879-37598948)
chr1 (25-94)||(40917808-40917877)
chr1 (25-94)||(42359391-42359460)
chr1 (25-96)||(32461395-32461466)
chr1 (37-94)||(1815305-1815362)
chr1 (25-94)||(22515829-22515898)
chr1 (25-94)||(46348325-46348394)
chr1 (25-94)||(47989556-47989625)
chr1 (28-92)||(5898211-5898275)
chr1 (25-74)||(1704937-1704986)
chr1 (25-82)||(6427535-6427592)
chr1 (24-77)||(17778618-17778671)
chr1 (25-94)||(18337377-18337446)
chr1 (25-90)||(18556387-18556452)
chr1 (25-73)||(113362-113410)
chr1 (25-89)||(16297223-16297287)
chr1 (44-78)||(9690234-9690268)
chr1 (36-94)||(18190061-18190119)
chr1 (25-95)||(29163323-29163393)
chr1 (37-91)||(40181922-40181976)
chr1 (25-94)||(25934675-25934744)
chr1 (43-96)||(43492454-43492507)
chr1 (45-94)||(51410073-51410122)
chr1 (25-77)||(17831464-17831516)
chr1 (25-69)||(21365994-21366038)
chr1 (25-73)||(46940750-46940798)
chr1 (25-76)||(5944360-5944411)
chr1 (43-82)||(6427595-6427634)
chr1 (25-72)||(25452108-25452155)
chr1 (25-72)||(29144322-29144369)
chr1 (25-67)||(22881569-22881611)
chr1 (25-94)||(34741894-34741963)
chr1 (43-76)||(16164264-16164297)
chr1 (35-76)||(19562567-19562608)
chr1 (25-66)||(22947806-22947847)
chr1 (25-94)||(31694641-31694710)
chr1 (25-94)||(38078603-38078672)
[»] chr3 (36 HSPs)
chr3 (25-95)||(40993277-40993347)
chr3 (20-94)||(55401123-55401197)
chr3 (25-94)||(4987222-4987291)
chr3 (25-94)||(41961581-41961650)
chr3 (25-88)||(27505305-27505368)
chr3 (25-87)||(34185054-34185116)
chr3 (25-95)||(35222985-35223055)
chr3 (25-94)||(20503513-20503582)
chr3 (42-94)||(10955000-10955052)
chr3 (24-82)||(28918063-28918121)
chr3 (25-94)||(7171549-7171618)
chr3 (25-74)||(40052380-40052429)
chr3 (25-73)||(3163973-3164021)
chr3 (25-77)||(15999952-16000004)
chr3 (43-94)||(8039784-8039835)
chr3 (25-88)||(14216957-14217020)
chr3 (25-88)||(14223086-14223149)
chr3 (47-94)||(14832158-14832205)
chr3 (25-95)||(11252023-11252093)
chr3 (25-95)||(8789490-8789562)
chr3 (21-94)||(13806295-13806367)
chr3 (25-94)||(14209172-14209241)
chr3 (25-78)||(17276791-17276844)
chr3 (25-78)||(24204983-24205036)
chr3 (25-82)||(49651718-49651775)
chr3 (25-77)||(5407201-5407253)
chr3 (25-73)||(11610578-11610626)
chr3 (25-93)||(18426998-18427066)
chr3 (25-73)||(25775576-25775624)
chr3 (25-89)||(29508503-29508567)
chr3 (25-64)||(3730110-3730149)
chr3 (25-72)||(16789587-16789634)
chr3 (34-88)||(3631738-3631792)
chr3 (25-95)||(13845467-13845537)
chr3 (25-66)||(14979225-14979266)
chr3 (25-66)||(34910393-34910434)
[»] chr4 (41 HSPs)
chr4 (25-94)||(23292928-23292997)
chr4 (28-94)||(49431074-49431140)
chr4 (25-94)||(30982809-30982878)
chr4 (27-94)||(21945551-21945618)
chr4 (25-94)||(28964190-28964259)
chr4 (26-78)||(28084588-28084640)
chr4 (25-88)||(3947703-3947766)
chr4 (25-94)||(24343560-24343630)
chr4 (25-94)||(53381532-53381602)
chr4 (25-94)||(4157484-4157553)
chr4 (25-94)||(12895216-12895285)
chr4 (25-94)||(16073442-16073511)
chr4 (25-94)||(22234821-22234890)
chr4 (25-94)||(34306746-34306815)
chr4 (25-94)||(35157927-35157996)
chr4 (25-77)||(715547-715599)
chr4 (25-77)||(752873-752925)
chr4 (25-93)||(8423660-8423728)
chr4 (25-88)||(36635384-36635447)
chr4 (25-82)||(19482739-19482796)
chr4 (25-74)||(22440559-22440608)
chr4 (25-82)||(29205528-29205585)
chr4 (25-82)||(35161096-35161153)
chr4 (25-70)||(37203324-37203369)
chr4 (25-77)||(42640589-42640641)
chr4 (25-76)||(7424724-7424774)
chr4 (25-72)||(18513177-18513224)
chr4 (28-74)||(3712458-3712504)
chr4 (25-71)||(11596299-11596345)
chr4 (36-78)||(21873315-21873357)
chr4 (36-78)||(21929176-21929218)
chr4 (28-94)||(30838269-30838335)
chr4 (32-78)||(32910627-32910673)
chr4 (25-94)||(2361917-2361986)
chr4 (25-94)||(4157197-4157266)
chr4 (25-62)||(5775306-5775343)
chr4 (25-94)||(12323968-12324037)
chr4 (25-94)||(19312394-19312463)
chr4 (25-66)||(25950474-25950515)
chr4 (25-66)||(40784029-40784070)
chr4 (46-95)||(56049923-56049972)
[»] scaffold0003 (1 HSPs)
scaffold0003 (25-94)||(241653-241722)
[»] chr2 (26 HSPs)
chr2 (25-94)||(2438661-2438730)
chr2 (25-94)||(18840955-18841024)
chr2 (25-94)||(37419802-37419871)
chr2 (25-94)||(37559025-37559094)
chr2 (25-93)||(19942314-19942382)
chr2 (25-93)||(26769571-26769639)
chr2 (25-94)||(28596517-28596586)
chr2 (25-94)||(38117101-38117170)
chr2 (25-77)||(15657940-15657992)
chr2 (25-95)||(24009342-24009412)
chr2 (25-94)||(15972921-15972990)
chr2 (25-94)||(35056927-35056996)
chr2 (25-93)||(27084318-27084386)
chr2 (28-71)||(23058389-23058432)
chr2 (25-76)||(42511324-42511375)
chr2 (36-94)||(12224271-12224329)
chr2 (25-94)||(30717461-30717530)
chr2 (34-94)||(5040782-5040842)
chr2 (25-89)||(11223795-11223858)
chr2 (25-72)||(42832234-42832281)
chr2 (45-95)||(5367239-5367289)
chr2 (25-59)||(19536363-19536397)
chr2 (25-79)||(19980738-19980792)
chr2 (25-95)||(21782746-21782816)
chr2 (35-76)||(14996171-14996212)
chr2 (24-61)||(23354925-23354962)
[»] scaffold0652 (1 HSPs)
scaffold0652 (25-94)||(404-473)
[»] chr8 (31 HSPs)
chr8 (25-94)||(22652035-22652104)
chr8 (25-94)||(29510235-29510304)
chr8 (27-94)||(5813640-5813707)
chr8 (25-88)||(8343381-8343444)
chr8 (20-94)||(15816055-15816129)
chr8 (25-94)||(20679337-20679406)
chr8 (35-82)||(22943301-22943348)
chr8 (20-94)||(36450691-36450765)
chr8 (25-94)||(926730-926799)
chr8 (25-94)||(29447503-29447572)
chr8 (25-94)||(34450963-34451032)
chr8 (28-88)||(22197676-22197736)
chr8 (25-93)||(29447041-29447109)
chr8 (34-94)||(40332239-40332299)
chr8 (25-95)||(3951478-3951548)
chr8 (25-91)||(31557047-31557113)
chr8 (34-95)||(126298-126359)
chr8 (42-95)||(44462154-44462207)
chr8 (42-95)||(44469687-44469740)
chr8 (25-93)||(14134748-14134816)
chr8 (25-73)||(39820498-39820545)
chr8 (25-73)||(44067596-44067644)
chr8 (25-72)||(8343037-8343084)
chr8 (25-68)||(17751730-17751773)
chr8 (25-68)||(17760717-17760760)
chr8 (25-72)||(27213595-27213642)
chr8 (46-96)||(12570461-12570511)
chr8 (46-96)||(12570687-12570737)
chr8 (25-95)||(43737753-43737823)
chr8 (24-65)||(16987990-16988031)
chr8 (25-94)||(21465471-21465540)
[»] chr5 (32 HSPs)
chr5 (25-94)||(21190998-21191067)
chr5 (25-94)||(43564929-43564998)
chr5 (25-94)||(21576687-21576756)
chr5 (26-95)||(39268541-39268610)
chr5 (25-94)||(39698600-39698669)
chr5 (25-94)||(42893408-42893477)
chr5 (25-76)||(14873588-14873639)
chr5 (35-94)||(15382533-15382592)
chr5 (25-94)||(7677764-7677833)
chr5 (34-75)||(17088358-17088399)
chr5 (45-94)||(21522809-21522858)
chr5 (45-94)||(21533375-21533424)
chr5 (45-94)||(21542089-21542138)
chr5 (25-88)||(31084382-31084445)
chr5 (25-88)||(43001859-43001922)
chr5 (25-71)||(19820330-19820376)
chr5 (25-75)||(35017110-35017160)
chr5 (25-94)||(28588616-28588685)
chr5 (25-93)||(17123097-17123164)
chr5 (20-75)||(17593660-17593715)
chr5 (25-88)||(30098391-30098454)
chr5 (35-82)||(30183620-30183667)
chr5 (24-95)||(30502329-30502400)
chr5 (24-95)||(30542672-30542743)
chr5 (25-88)||(39205939-39206002)
chr5 (28-82)||(21194068-21194122)
chr5 (25-71)||(38464315-38464361)
chr5 (25-82)||(23015926-23015983)
chr5 (25-74)||(23290000-23290049)
chr5 (36-89)||(27932288-27932341)
chr5 (25-94)||(32766874-32766943)
chr5 (34-94)||(43554574-43554634)
[»] scaffold0053 (1 HSPs)
scaffold0053 (25-94)||(8846-8915)
[»] scaffold0019 (1 HSPs)
scaffold0019 (25-94)||(71784-71853)
[»] scaffold0044 (1 HSPs)
scaffold0044 (34-94)||(53239-53299)
[»] scaffold0136 (1 HSPs)
scaffold0136 (25-94)||(3780-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (29-94)||(2987-3052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (25-77)||(4823-4875)
[»] scaffold0103 (1 HSPs)
scaffold0103 (25-73)||(51892-51940)
[»] scaffold0050 (1 HSPs)
scaffold0050 (26-94)||(70326-70394)
[»] scaffold0004 (1 HSPs)
scaffold0004 (25-89)||(92875-92939)
[»] scaffold0512 (1 HSPs)
scaffold0512 (25-94)||(4978-5047)
[»] scaffold0475 (1 HSPs)
scaffold0475 (25-94)||(3356-3425)
[»] scaffold0450 (1 HSPs)
scaffold0450 (25-94)||(8566-8635)
[»] scaffold0008 (1 HSPs)
scaffold0008 (25-94)||(263303-263372)
[»] scaffold0380 (1 HSPs)
scaffold0380 (25-77)||(8666-8718)
[»] scaffold0361 (1 HSPs)
scaffold0361 (25-89)||(14580-14644)
[»] scaffold0306 (1 HSPs)
scaffold0306 (25-94)||(13454-13523)
[»] scaffold0154 (1 HSPs)
scaffold0154 (25-94)||(13472-13541)
[»] scaffold0152 (1 HSPs)
scaffold0152 (25-94)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (45-94)||(45492-45541)
[»] scaffold0007 (1 HSPs)
scaffold0007 (25-78)||(225199-225252)


Alignment Details
Target: chr7 (Bit Score: 582; Significance: 0; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 79 - 716
Target Start/End: Complemental strand, 6490795 - 6490154
Alignment:
Q  79 tgtcggacaccgacacactaaccaattaactagagtaaaagtgaaatggttaatttctttttc----aattttttacctcatgagttgcctgtcaaatcc 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    |||||||||||||||||||||||||||||||||    
T  6490795 tgtcggacaccgacacactgaccaattaactagagtaaaagtgaaatggttaatttttttttctttcaattttttacctcatgagttgcctgtcaaatcc 6490696  T
Q  175 tgatgcagccaacactcctctattctcctcagcccttctcaagaggtatggcataacagtctcaacaggtccaaatggcatgtacttgctaacttgaaac 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6490695 tgatgcagccaacactcctctattctcctcagcccttctcaagaggtatggcataacagtctcaacaggtccaaatggcatgtacttgctaacttgaaac 6490596  T
Q  275 cctgcattgctcaaagcaaaggatagtgcctcagacattccatatagttgtgcaaattccatcttatggttcacctttccaatccctaattcatgtgctt 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6490595 cctgcattgctcaaagcaaaggatagtgcctcagacattccatatagttgtgcaaattccatcttatggttcacctttccaatccctaattcatgtgctt 6490496  T
Q  375 ttgcagcagccaattttcctatacaaaaaacaacattaattaaattaaa-tcaaactcatacccctcaattgcatatatcaatttccttatcatcataat 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||||| || ||||||||||||||||||||    
T  6490495 ttgcagcagccaattttcctatacaaaaaacaacattaattaaatcaaactcatac-catacccctcaattgcatacattaatttccttatcatcataat 6490397  T
Q  474 atcatataatacatacctgattcaatgttatgagttgcaagaacaactccaccaggaccattagcaatcttctcaagcatgtaatctgaacaatcattga 573  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6490396 atcatataatatatacctgattcaatgttatgagttgcaagaacaactccaccaggaccattagcaatcttctcaagcatgtaatctgaacaatcattga 6490297  T
Q  574 aacacttatgtgtatccttaatagtgttatgaattggtgaagcatatcccaaatcagcagccaattttctttcactagacatataagcacctctaaccaa 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6490296 aacacttatgtgtatccttaatagtgttatgaattggtgaagcatatcccaaatcagcagccaattttctttcactagacatataagcacctctaaccaa 6490197  T
Q  674 cttaaatcccattggtatccccattttctcagcagcctttgat 716  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6490196 cttaaatcccattggtatccccattttctcagcagcctttgat 6490154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 598325 - 598256
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  598325 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 32287405 - 32287475
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  32287405 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacaca 32287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 5409773 - 5409836
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 21880269 - 21880200
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||| ||||| |||| |||||||||||    
T  21880269 atgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacac 21880200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 24339770 - 24339701
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| || |||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  24339770 atgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 43027406 - 43027469
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||||||| |||| |||||    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 15680926 - 15680857
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||| ||||| |||||| |||||||||||||||||| |||| |||||||||||    
T  15680926 atgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 15680857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 26033392 - 26033461
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| || ||||||| ||||||||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 9778622 - 9778571
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgt 9778571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17852117 - 17852060
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| ||||||| |||| |||||| ||||| |||||||||||||||||||||||    
T  17852117 atgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtc 17852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 21864925 - 21864856
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  |||||| |||| ||||| ||||||||||||||||||||||||| |||| |||| ||||||    
T  21864925 atgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacac 21864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 29763131 - 29763183
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| |||||||||||||||||| | |||||||||||||||    
T  29763131 atgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtc 29763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 32093956 - 32094020
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgt-cccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| | ||||| |||||||||||||||| |||||||||||||||||||| |||| |||||    
T  32093956 atgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 1401140 - 1401076
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccga 91  Q
    |||||||||||||||| ||| ||||||| |||||||| |||||||||  |||| |||||||||||||    
T  1401140 atgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccga 1401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 1433576 - 1433513
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| |||||||||| ||||||| |||||||||||| |||| |||| |||||    
T  1433576 atgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 5835353 - 5835294
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||| ||||||||| |||||||||||| || ||||| ||||||||| ||||||||||||    
T  5835353 acacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacaca 5835294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 6490833 - 6490786
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  6490833 atgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 14729825 - 14729770
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtg 75  Q
    |||| |||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  14729825 tagctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 22868164 - 22868113
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||||||||||| ||||||||| | ||||||||||||| |||||||||    
T  22868164 atgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacgtgt 22868113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 22484142 - 22484072
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| ||||||| || | |||| || ||||||||| |||||||||| ||||||||||||    
T  22484142 atgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacaca 22484072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  27 gaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||| |||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 32308248 - 32308179
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||| ||||| ||||||||||  ||||| |||||||||||| ||||| ||||  ||||||||||    
T  32308248 atgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacac 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 13770810 - 13770762
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    ||||| |||||||  ||||||||||||||| ||||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgt 13770762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 18215148 - 18215187
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  18215148 ggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 3294264 - 3294298
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    ||||||||||||||||||||||| |||||||||||    
T  3294264 tcggattaggcgtgtcccggtgttggacacgtgtc 3294298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 20549908 - 20549838
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| || |||| ||||||||||||||||| |  ||||||||| ||||  |||| ||||||||||||    
T  20549908 atgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacaca 20549838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 33994318 - 33994260
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| || |||||||||||||| |||||| ||||| ||||| |||| |||||||||||    
T  33994318 acactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacac 33994260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 43250118 - 43250068
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    ||||| ||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtca 43250068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccg 90  Q
    |||||||||||||| |||||||||||| ||||| |||| |||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcg 67  Q
    ||||||| ||||||| || |||||||||||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 29998973 - 29999026
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    ||||||||||||||||| ||| |||||| |||||   |||||||||||||||||    
T  29998973 catgaagcatggacactcctccgattagacgtgtttaggtgtcggacacgtgtc 29999026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 30813919 - 30813866
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||| |||||||| ||||||| |||||||||||||||| | | |||||||||||    
T  30813919 tagctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacg 30813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 3e-47; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 148 - 400
Target Start/End: Original strand, 6347534 - 6347786
Alignment:
Q  148 ttacctcatgagttgcctgtcaaatcctgatgcagccaacactcctctattctcctcagcccttctcaagaggtatggcataacagtctcaacaggtcca 247  Q
    |||||| ||||||||||| |||||||| || |||||||| |  |||||||| || ||||| |||||||| || || ||||||||  ||||||| ||||||    
T  6347534 ttaccttatgagttgcctatcaaatccagaagcagccaaaaggcctctattttcttcagctcttctcaatagataaggcataaccatctcaactggtcca 6347633  T
Q  248 aatggcatgtacttgctaacttgaaaccctgcattgctcaaagcaaaggatagtgcctcagacattccatatagttgtgcaaattccatcttatggttca 347  Q
    |||||||| |||||||| |||  ||| || || ||||||||| |||| || ||||| || ||||||||| |||||||||||||||| | |||||||||||    
T  6347634 aatggcatatacttgcttactctaaatccagctttgctcaaaccaaatgaaagtgcatctgacattccacatagttgtgcaaattcaagcttatggttca 6347733  T
Q  348 cctttccaatccctaattcatgtgcttttgcagcagccaattttcctatacaa 400  Q
    | ||||||||||| | ||||| ||||||||| || |||||||| |||| ||||    
T  6347734 cttttccaatcccaatttcatatgcttttgctgctgccaatttccctacacaa 6347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 148 - 395
Target Start/End: Original strand, 6325316 - 6325563
Alignment:
Q  148 ttacctcatgagttgcctgtcaaatcctgatgcagccaacactcctctattctcctcagcccttctcaagaggtatggcataacagtctcaacaggtcca 247  Q
    |||||| ||||||||||| |||||||| || |||||||| |  |||||||| || ||||| |||||||| || || ||||||||  ||||||| ||||||    
T  6325316 ttaccttatgagttgcctatcaaatccagaagcagccaaaaggcctctattttcttcagctcttctcaatagataaggcataaccatctcaactggtcca 6325415  T
Q  248 aatggcatgtacttgctaacttgaaaccctgcattgctcaaagcaaaggatagtgcctcagacattccatatagttgtgcaaattccatcttatggttca 347  Q
    |||||||| |||||||| |||  ||| || || ||||||||| |||| || ||||| || ||||||||| |||||||||||||||| | ||| || ||||    
T  6325416 aatggcatatacttgcttactctaaatccagcgttgctcaaaccaaatgaaagtgcatctgacattccacatagttgtgcaaattcaagcttgtgattca 6325515  T
Q  348 cctttccaatccctaattcatgtgcttttgcagcagccaattttccta 395  Q
    ||||||| ||||| | ||||| ||||||||| ||||||||||| ||||    
T  6325516 cctttcccatcccaatttcatatgcttttgctgcagccaatttcccta 6325563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 148 - 395
Target Start/End: Original strand, 6332272 - 6332519
Alignment:
Q  148 ttacctcatgagttgcctgtcaaatcctgatgcagccaacactcctctattctcctcagcccttctcaagaggtatggcataacagtctcaacaggtcca 247  Q
    |||||| ||||||||||| |||||||| || |||||||| |  |||||||| || ||||| |||||||| || || ||||||||  ||||||| ||||||    
T  6332272 ttaccttatgagttgcctatcaaatccagaagcagccaaaaggcctctattttcttcagctcttctcaatagataaggcataaccatctcaactggtcca 6332371  T
Q  248 aatggcatgtacttgctaacttgaaaccctgcattgctcaaagcaaaggatagtgcctcagacattccatatagttgtgcaaattccatcttatggttca 347  Q
    |||||||| |||||||| |||  ||| || || ||||||||| |||| || ||||| || ||||||||| |||||||||||||||| | ||| || ||||    
T  6332372 aatggcatatacttgcttactctaaatccagcgttgctcaaaccaaatgaaagtgcatctgacattccacatagttgtgcaaattcaagcttgtgattca 6332471  T
Q  348 cctttccaatccctaattcatgtgcttttgcagcagccaattttccta 395  Q
    ||||||| ||||| | ||||| ||||||||| ||||||||||| ||||    
T  6332472 cctttcccatcccaatttcatatgcttttgctgcagccaatttcccta 6332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 531 - 714
Target Start/End: Original strand, 6348351 - 6348534
Alignment:
Q  531 ccattagcaatcttctcaagcatgtaatctgaacaatcattgaaacacttatgtgtatccttaatagtgttatgaattggtgaagcatatcccaaatcag 630  Q
    |||||||||| |||||||||||  |||  ||||||||||||||| || ||||||||||| |||||||| | ||||||||||||   | | || |||        
T  6348351 ccattagcaaacttctcaagcaaataagatgaacaatcattgaagcaattatgtgtatctttaatagtatcatgaattggtgacttagacccaaaagatt 6348450  T
Q  631 cagccaattttctttcactagacatataagcacctctaaccaacttaaatcccattggtatccccattttctcagcagcctttg 714  Q
    |||||||| | |||||  | ||||||||||||||||||||||| ||||||||||| || || || ||||| |||||||| ||||    
T  6348451 cagccaatgtactttctgttgacatataagcacctctaaccaatttaaatcccataggaattccaattttttcagcagcttttg 6348534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 531 - 714
Target Start/End: Original strand, 6326115 - 6326298
Alignment:
Q  531 ccattagcaatcttctcaagcatgtaatctgaacaatcattgaaacacttatgtgtatccttaatagtgttatgaattggtgaagcatatcccaaatcag 630  Q
    |||||||||| |||||||||||  |||  ||||||||||||||| || ||||||||||| | |||||| | ||||||||||||   | | || |||        
T  6326115 ccattagcaaacttctcaagcaaataagatgaacaatcattgaagcaattatgtgtatcttcaatagtatcatgaattggtgacttagacccaaaagatt 6326214  T
Q  631 cagccaattttctttcactagacatataagcacctctaaccaacttaaatcccattggtatccccattttctcagcagcctttg 714  Q
    |||||||| | |||||  | ||||||||||||||||||||||| ||||||||||| || || || ||||  |||||||| ||||    
T  6326215 cagccaatgtactttctgtggacatataagcacctctaaccaatttaaatcccataggaattccaatttcttcagcagcttttg 6326298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 531 - 714
Target Start/End: Original strand, 6333071 - 6333254
Alignment:
Q  531 ccattagcaatcttctcaagcatgtaatctgaacaatcattgaaacacttatgtgtatccttaatagtgttatgaattggtgaagcatatcccaaatcag 630  Q
    |||||||||| |||||||||||  |||  ||||||||||||||| || ||||||||||| | |||||| | ||||||||||||   | | || |||        
T  6333071 ccattagcaaacttctcaagcaaataagatgaacaatcattgaagcaattatgtgtatcttcaatagtatcatgaattggtgacttagacccaaaagatt 6333170  T
Q  631 cagccaattttctttcactagacatataagcacctctaaccaacttaaatcccattggtatccccattttctcagcagcctttg 714  Q
    |||||||| | |||||  | ||||||||||||||||||||||| ||||||||||| || || || ||||  |||||||| ||||    
T  6333171 cagccaatgtactttctgtggacatataagcacctctaaccaatttaaatcccataggaattccaatttcttcagcagcttttg 6333254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 28152215 - 28152146
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | ||||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  28152215 atgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 28152146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 34595251 - 34595182
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| ||||||||||||| |||||||||| |||| |||||||||||    
T  34595251 atgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacac 34595182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 8365450 - 8365519
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||| ||| ||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  8365450 atgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 10339056 - 10339125
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| ||||||||||||||| |||||||||| ||||| |||| |||||||||||    
T  10339056 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 16766825 - 16766756
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||| |  ||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  16766825 atgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 28715412 - 28715343
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | ||||| |||| ||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  28715412 atgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacac 28715343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 32978842 - 32978910
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| ||||||| || ||||||| ||||||||||||||||||| ||||| |||| |||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 32978910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 17327592 - 17327655
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| ||||||||||||||||||| ||||| |||||||||| |||| |||||    
T  17327592 atgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 8776910 - 8776968
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcg 83  Q
    |||||||| ||||||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  8776910 atgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcg 8776968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 4878059 - 4877991
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||| || |||||||||| ||||| |||| |||||||||||    
T  4878059 atgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacac 4877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 17841531 - 17841596
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccg 90  Q
    |||||||| ||||||| ||||||||||||||||| | ||||||||||| |||| |||| |||||||    
T  17841531 atgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 31385047 - 31384990
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| ||||||| || ||||||||||||||||||||| ||||||||||| ||||    
T  31385047 atgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtc 31384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 31959267 - 31959215
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||    
T  31959267 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtc 31959215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 7378096 - 7378026
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| ||| |||||| |||||||||||||||||  | |||| |||| ||||||||||||    
T  7378096 atgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacaca 7378026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 5970039 - 5970108
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||| | |||| |||||||| ||||||||||| ||||||| | ||||| |||| |||||||||||    
T  5970039 atgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 7248486 - 7248417
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||| | |||||||||||||||||||| |||  ||||  ||||||||||    
T  7248486 atgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 7938223 - 7938170
Alignment:
Q  19 atagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||| |||||||| ||||||| ||||||| ||||||||| |||||||||||||    
T  7938223 atagctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 8714108 - 8714039
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  |||||| |||||||| ||||||||||| ||||||| | ||||| |||| |||||||||||    
T  8714108 atgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 9107301 - 9107370
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| || |||| ||||||||||| |||||||||||||||||||  ||  |||| |||||||||||    
T  9107301 atgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 18367964 - 18367895
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||| ||||||||||| ||||| |||| ||||| |||| |||||||||||    
T  18367964 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 24645598 - 24645529
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  ||||||  ||||||||| ||||||  ||||||||||||||||| |||| |||||||||||    
T  24645598 atgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 9629511 - 9629464
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||||||||| |||||||||| |||||| | |||||||||||    
T  9629511 atgaagcatggacactcctcggattagacgtgtctcagtgtcggacac 9629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 34172288 - 34172253
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||||||||||||| |||||||||||||||||    
T  34172288 ctcggattaggcgtgtcctggtgtcggacacgtgtc 34172253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 3209505 - 3209447
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| |||||||||||||||||| |||||||||| |||||| |||  ||||| |||||    
T  3209505 acactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacac 3209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 5732476 - 5732510
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  5732476 atgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 9522999 - 9522949
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||||||||| ||||||||||||||||||   || ||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacaca 9522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 9658997 - 9658928
Alignment:
Q  25 atgaagcatggacactgctcgga-ttaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||||||| ||||||| || ||| |||||||||| |||||||| |||||||||| ||||  |||||||||    
T  9658997 atgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgaca 9658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 5e-24; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 27965918 - 27965983
Alignment:
Q  1 cactataaatgaacctccatagccatgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  27965918 cactataaatgaacctccatagctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 40258875 - 40258944
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||| |||||||||||    
T  40258875 atgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacac 40258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 1486644 - 1486709
Alignment:
Q  23 ccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  1486644 ccatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 9828172 - 9828103
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||| |||||    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 37598948 - 37598879
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  37598948 atgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacac 37598879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 40917877 - 40917808
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 42359391 - 42359460
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacac 42359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 32461395 - 32461466
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacacac 96  Q
    |||||||| ||||||| || |||||||||||||||| ||||| |||||||||| |||| |||||||||||||    
T  32461395 atgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacacac 32461466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 1815362 - 1815305
Alignment:
Q  37 cactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacac 1815305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 22515829 - 22515898
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| | ||||| |||| |||||||||||    
T  22515829 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacac 22515898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 46348325 - 46348394
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||  ||||||| ||||||||| |||||||||||||||||| |||| |||||||||||    
T  46348325 atgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 46348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 47989625 - 47989556
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||| |||| |||| ||||| |||| |||||||||||    
T  47989625 atgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 5898211 - 5898275
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgac 92  Q
    ||||| ||||||| |||||||||| ||||||||||||| ||||||||||| |||| |||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 1704937 - 1704986
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgt 74  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||    
T  1704937 atgaagcatggacactccttggattaggcgtgtctcggtgtcggacacgt 1704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 6427592 - 6427535
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| |||||||  || |||||||||||||||||||||||||||||||| ||||    
T  6427592 atgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtc 6427535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 17778671 - 17778618
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||||||||    
T  17778671 catgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtc 17778618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 18337446 - 18337377
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||| |||| |||||| |||||||||||||||  |||| |||||||||||    
T  18337446 atgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacac 18337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 18556387 - 18556452
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccg 90  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||| |||||||  ||| |||||||    
T  18556387 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccg 18556452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 113410 - 113362
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  113410 atgaagcatgggcactcctcggattaggcgtgtcccggtgttggacacg 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||||  ||| |||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 9690234 - 9690268
Alignment:
Q  44 cggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    |||||||||||||||||||||||||||||||||||    
T  9690234 cggattaggcgtgtcccggtgtcggacacgtgtca 9690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 18190061 - 18190119
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| ||||||||||| |||||||||||||||||||||||  |||| |||| ||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacac 18190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 29163323 - 29163393
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| | ||||| ||| |||||| |||||||||||||| | |||||||| |||| ||||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacaca 29163393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 40181976 - 40181922
Alignment:
Q  37 cactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccga 91  Q
    |||| |||||||||||||||||||||||| ||||||||||  |||| ||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 25934744 - 25934675
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||| |||||| |||| ||||| |||||||||| |||| |||||||||||    
T  25934744 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 43492454 - 43492507
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacacac 96  Q
    ||||||||||||||| ||||||||||||| ||||  |||| |||||||||||||    
T  43492454 tcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacac 43492507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 51410122 - 51410073
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||| |||||||||| ||||||| |||| |||||||||||    
T  51410122 ggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacac 51410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 17831464 - 17831516
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||||||| ||||    
T  17831464 atgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtc 17831516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 21365994 - 21366038
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcgga 69  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||    
T  21365994 atgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 46940750 - 46940798
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| | ||||| |||||||||||||||| |||||||||||||||    
T  46940750 atgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacg 46940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 5944411 - 5944360
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||| | ||||| |||||||||||||| ||||||||||||||| ||||    
T  5944411 atgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgt 5944360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 6427634 - 6427595
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  6427634 tcggattaggcgtgtcccggtatcggacacgtgtcgtgtc 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 25452108 - 25452155
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacac 25452155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 29144322 - 29144369
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  29144322 atgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 22881569 - 22881611
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcg 67  Q
    |||||||| ||||||| |||||||||| |||||||||||||||    
T  22881569 atgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 34741963 - 34741894
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg-tgtcatgtcggacaccgacac 94  Q
    |||||||| |||||||  |||||||||||||||||| |||||||||||| |||| |||| |||||| ||||    
T  34741963 atgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 16164264 - 16164297
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    ||||||||||||||||| ||||||||||||||||    
T  16164264 tcggattaggcgtgtcctggtgtcggacacgtgt 16164297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 19562567 - 19562608
Alignment:
Q  35 gacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||| ||||||||||| ||||||| |||||||||||||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgt 19562608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 22947847 - 22947806
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    |||||||| ||||||| |||||||||||||||||| ||||||    
T  22947847 atgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 31694641 - 31694710
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| |||||||||||| ||||||||| | | ||||  |||| |||||||||||    
T  31694641 atgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 38078603 - 38078672
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | | ||| |||||||||||||||||| ||||| | ||| ||||| |||| |||||||||||    
T  38078603 atgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacac 38078672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 40993277 - 40993347
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacaca 40993347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 55401197 - 55401123
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||| |||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  55401197 tagctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 55401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 4987222 - 4987291
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 41961581 - 41961650
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  41961581 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 27505368 - 27505305
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||| |||||    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 34185054 - 34185116
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggaca 87  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 35223055 - 35222985
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| ||||||| | ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  35223055 atgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacaca 35222985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 20503582 - 20503513
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||| ||||| ||||  ||||||||||    
T  20503582 atgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacac 20503513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 10955052 - 10955000
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  10955052 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 28918121 - 28918063
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    ||||||||| ||||||| || |||||||||||||||| |||||||||||||||| ||||    
T  28918121 catgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 28918063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 7171618 - 7171549
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||  ||||| || |||||||||||||| |||||||||||||||||| |||| |||||| ||||    
T  7171618 atgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacac 7171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 40052429 - 40052380
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgt 74  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  40052429 atgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 3163973 - 3164021
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  3163973 atgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacacg 3164021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 15999952 - 16000004
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||| ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  15999952 atgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtc 16000004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 8039784 - 8039835
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| |||||||||||||||||||| || ||||||| |||||||||||    
T  8039784 tcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacac 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 14217020 - 14216957
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||| |||| |||||    
T  14217020 atgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 14223149 - 14223086
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||| |||| |||||    
T  14223149 atgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 14832205 - 14832158
Alignment:
Q  47 attaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 11252093 - 11252023
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||||  |||||| |||||||||||||||| ||| || |||||||||||  |||| ||||||||||||    
T  11252093 atgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacaca 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 8789490 - 8789562
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggaca--cgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| ||||||||||||||||| ||||||| ||||   ||||| |||| ||||||||||||    
T  8789490 atgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacaca 8789562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 13806367 - 13806295
Alignment:
Q  21 agccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||| || ||||  ||||  ||||||||||    
T  13806367 agccatgaagcacggacact-ctcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacac 13806295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 14209241 - 14209172
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||||||| || ||||| ||||| ||||||||| |||| |||||||||||    
T  14209241 atgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 17276844 - 17276791
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    |||||||| ||||||| ||||||||||| | ||| |||||||||||||||||||    
T  17276844 atgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtca 17276791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 24204983 - 24205036
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtca 24205036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 49651718 - 49651775
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||| | ||||| ||||    
T  49651718 atgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtc 49651775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 5407201 - 5407253
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    ||||||||||||||||  | ||||||||||||||| || ||||||||||||||    
T  5407201 atgaagcatggacactctttggattaggcgtgtcctggcgtcggacacgtgtc 5407253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 11610626 - 11610578
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  11610626 atgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 18427066 - 18426998
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    ||||| || ||||||| ||| ||||||| ||||||||||| |||||||||||| | || ||||||||||    
T  18427066 atgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgaca 18426998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 25775624 - 25775576
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| | ||||| |||||||||||||||||| |||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacacg 25775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 29508567 - 29508503
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    |||||||| ||||||| || ||||||| ||||||||||||||||||  ||||| |||| ||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacacc 29508503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 3730110 - 3730149
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtg 64  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  3730110 atgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 16789587 - 16789634
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||||||||| || |||||||| |||||||| ||||||||||    
T  16789587 atgaagcatggacactcctaggattaggtgtgtcccgttgtcggacac 16789634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 3631792 - 3631738
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||| |||| |||||    
T  3631792 ggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 13845467 - 13845537
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| || |||| ||||||||| | ||||| ||||||| || |||| ||||||||||||    
T  13845467 atgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacaca 13845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 14979266 - 14979225
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    |||||||| ||||||| ||||| |||||||||||||||||||    
T  14979266 atgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 34910434 - 34910393
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  34910434 atgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 23292928 - 23292997
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23292928 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 23292997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 49431140 - 49431074
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||| |||||||||||    
T  49431140 aagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacac 49431074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 30982809 - 30982878
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| |||||||  | ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 21945618 - 21945551
Alignment:
Q  27 gaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| |||||| ||||||||||||||||  |||||||||||| |||||||||| |||||||||||    
T  21945618 gaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacac 21945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 28964190 - 28964259
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| | ||||| |||| ||||| |||||    
T  28964190 atgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacac 28964259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 28084640 - 28084588
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtca 28084588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 3947703 - 3947766
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| ||||||||||| |||||| ||||||||||||||||| |||| |||||    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 24343630 - 24343560
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc-atgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  24343630 atgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 53381532 - 53381602
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca-tgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||| ||| |||| |||| |||||||||||    
T  53381532 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 4157553 - 4157484
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||| |||||| |||| ||||||||| || |||||||||||| ||||| |||| |||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 12895216 - 12895285
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | ||||| |||||||||||||||||||| ||||||| || |||| |||| |||||||||||    
T  12895216 atgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacac 12895285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 16073511 - 16073442
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||| |||||||||||||||||   |||||||||| || || |||| |||||||||||    
T  16073511 atgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacac 16073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 22234821 - 22234890
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | ||||| ||||||||||  |||||| ||||||||||||||||| |||| |||||||||||    
T  22234821 atgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 34306746 - 34306815
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| | ||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  34306746 atgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 34306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 35157927 - 35157996
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||| |||||| ||||||| ||||| ||||| |||| |||||||||||    
T  35157927 atgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacac 35157996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 715547 - 715599
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||| |||||    
T  715547 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 715599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 752873 - 752925
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||| |||||    
T  752873 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 752925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 8423660 - 8423728
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||| ||| ||||||| ||| ||||||||||||||||||||||||||  |||| |||| ||||||||||    
T  8423660 atgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgaca 8423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 36635447 - 36635384
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| |||||||  |||||||||||||||||||||||| ||| |||||| |||| |||||    
T  36635447 atgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac 36635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 19482796 - 19482739
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| | ||||| ||||||||||| ||||||| |||||||||||||||| ||||    
T  19482796 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtc 19482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 22440559 - 22440608
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgt 74  Q
    |||||||| ||||||| ||||||||||||||||||  |||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacgt 22440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 29205585 - 29205528
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| | ||||| ||||||||||||||||||| |||||||||| ||||| ||||    
T  29205585 atgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 35161153 - 35161096
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||| |||||||  |||||||||| |||| ||||||||||||||||||| ||||    
T  35161153 atgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 37203369 - 37203324
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggac 70  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||    
T  37203369 atgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 42640641 - 42640589
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||| ||| |||||||||||||||||| |||| ||||||||||||    
T  42640641 atgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtc 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 7424774 - 7424724
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||||||||||| || |||||||||||||  |||||||||||||||||    
T  7424774 atgaagcatggacactccttggattaggcgtgt-acggtgtcggacacgtgt 7424724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 18513177 - 18513224
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  18513177 atgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 3712458 - 3712504
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgt 74  Q
    ||||| ||||||| ||| |||||| ||||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 11596299 - 11596345
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggaca 71  Q
    |||||||| ||||||| ||| |||||||||||||||| |||||||||    
T  11596299 atgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 21873315 - 21873357
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    ||||| || ||||||| ||||||||||||||||||||||||||    
T  21873315 acactccttggattagacgtgtcccggtgtcggacacgtgtca 21873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 21929176 - 21929218
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    ||||| || ||||||| ||||||||||||||||||||||||||    
T  21929176 acactccttggattagacgtgtcccggtgtcggacacgtgtca 21929218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 30838335 - 30838269
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| ||||||| ||||| |||||||||||  |||||||||||||||||  ||| ||||| |||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 32910673 - 32910627
Alignment:
Q  32 atggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    ||||||||| |||||||||||||||||  ||||||||||||| ||||    
T  32910673 atggacactcctcggattaggcgtgtcatggtgtcggacacgcgtca 32910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 2361917 - 2361986
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| |||||||  || ||||||| ||||| ||||||| |||||| ||| |||| |||||||||||    
T  2361917 atgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacac 2361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 4157266 - 4157197
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  |||||| |||| |||||| || || |||||||||||| ||||| |||| |||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 5775306 - 5775343
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccgg 62  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  5775306 atgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 12324037 - 12323968
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||| ||| |||| || ||| |  |||||||||||||| |||||||||||    
T  12324037 atgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 19312463 - 19312394
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| || ||||||| ||| |||||| |||||| |||||||||||||||||| | || |||| ||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacac 19312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 25950474 - 25950515
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    |||||||||||||||| ||||||||||| ||||| |||||||    
T  25950474 atgaagcatggacactcctcggattaggtgtgtctcggtgtc 25950515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 40784070 - 40784029
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtc 66  Q
    |||||||| ||||||| ||||||||||| |||||||||||||    
T  40784070 atgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 56049972 - 56049923
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||    
T  56049972 gattaggtgtgtcctggtgtcggatacgtatcatgtctgacaccgacaca 56049923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 241722 - 241653
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  241722 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 2438661 - 2438730
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacac 2438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 18840955 - 18841024
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||||||||||    
T  18840955 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacac 18841024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 37419871 - 37419802
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||  || |||| |||||||||||    
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 37559094 - 37559025
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||||||||||| ||| |||||||||||    
T  37559094 atgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacac 37559025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| || | |||| ||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 26769639 - 26769571
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||| || |||||||    
T  26769639 atgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 28596586 - 28596517
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| ||||||  |||||||||||||||| |||| |||||||||||    
T  28596586 atgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacac 28596517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 38117101 - 38117170
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||  |||| |||||| ||||    
T  38117101 atgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacac 38117170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 15657992 - 15657940
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtc 15657940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 24009412 - 24009342
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| || |||| ||||||||||| ||||| |||||||||| |||| ||||||||||||    
T  24009412 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacaca 24009342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 15972990 - 15972921
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||| |  |||||||||| ||||||||| |||||||||||||| |||| |||||||||||    
T  15972990 atgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacac 15972921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 35056996 - 35056927
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| ||||||||||||  | |||||||||||||||| |||| |||||||||||    
T  35056996 atgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 27084386 - 27084318
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    ||||||||  |||||| ||| ||||||||||||| |||||| ||||||||||| |||| ||||||||||    
T  27084386 atgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 23058389 - 23058432
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 42511324 - 42511375
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||| ||||||| |||||||||| |||||||| |||||||||||||||    
T  42511324 atgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgt 42511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 12224329 - 12224271
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| || |||||||||||||||| ||||||||||||| || |||| |||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacac 12224271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 30717461 - 30717530
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || ||||||||||| |||| |||||| ||||||||| |||| |||| ||||||    
T  30717461 atgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 5040842 - 5040782
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| || ||| |||||||||||||| ||||||||| |||| |||| |||||||||||    
T  5040842 ggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 5040782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 11223795 - 11223858
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    |||||||| ||||||| ||| ||||||||||||||||||||| |||| ||||| |||| ||||||    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacc 11223858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 42832234 - 42832281
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| ||||||| || |||||||||||||||||| |||||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacac 42832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 5367289 - 5367239
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||||||||||||| |||||| | ||||| |||| ||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacaca 5367239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 19536363 - 19536397
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  19536363 atgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 19980792 - 19980738
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcat 79  Q
    |||||||||| ||||| ||||||||||| ||||| || ||||||||| |||||||    
T  19980792 atgaagcatgaacacttctcggattaggtgtgtctcgatgtcggacatgtgtcat 19980738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 21782746 - 21782816
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| | | |||||| ||||||||||||| ||||||||||| || | |||||| |||||    
T  21782746 atgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacaca 21782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 14996171 - 14996212
Alignment:
Q  35 gacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||| |||||||||||||||| |||||||| |||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt 14996212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 23354925 - 23354962
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccg 61  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  23354925 catgaagcaaggacactcctcggattaggcgtgtcccg 23354962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 404 - 473
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||| ||| |||| |||||||||||    
T  404 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 7e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 22652104 - 22652035
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||| |||| |||| |||||||||||    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 29510235 - 29510304
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||||||| ||| |||| |||||||||||    
T  29510235 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 5813707 - 5813640
Alignment:
Q  27 gaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8343444 - 8343381
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||||||  ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8343444 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 15816055 - 15816129
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||  |||||| |||| |||||| ||||    
T  15816055 tagctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 20679337 - 20679406
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||| ||||| | |||||||||||||||||||||||||||   ||| |||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacac 20679406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 22943301 - 22943348
Alignment:
Q  35 gacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 36450691 - 36450765
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||| ||||||||  |||||| |||||||||||||||||| ||||||||||||| ||| |||| |||||| ||||    
T  36450691 tagctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacac 36450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 926730 - 926799
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||| | || |||||||||||||||||||||||  ||| |||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacac 926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 29447572 - 29447503
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| |||||| | |||||||||||||||||| |||| |||| |||||||||||    
T  29447572 atgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 34450963 - 34451032
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||| ||||||||||| ||||| |||||||||| |||| |||||||||||    
T  34450963 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 22197676 - 22197736
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||| ||||||| ||| |||||||||||  |||||||||||||||||||||||| |||||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 29447041 - 29447109
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||||||| ||||||| || ||||||||||||||| |||||| ||||| |||| |||| ||||||||||    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 40332299 - 40332239
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||| ||||  ||||||||||    
T  40332299 ggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacac 40332239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 3951478 - 3951548
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||| ||| || ||||||||||||| || ||||| |||||||||| |||| ||||||||||||    
T  3951478 atgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacaca 3951548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 31557113 - 31557047
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccga 91  Q
    |||| ||||||||||  || ||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  31557113 atgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 126298 - 126359
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||| |||||||||| ||||||||||| | ||||||||||| |||| ||||| ||||||    
T  126298 ggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacaca 126359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 44462154 - 44462207
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||||| ||||||||||||||||||| || || |||| ||||||||||||    
T  44462154 ctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacaca 44462207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 44469687 - 44469740
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||||| ||||||||||||||||||| || || |||| ||||||||||||    
T  44469687 ctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacaca 44469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 14134816 - 14134748
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    ||||| || ||||||| |||| ||||||||||||| |||| |||||||||||| |||  ||||||||||    
T  14134816 atgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgaca 14134748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39820545 - 39820498
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  39820545 atgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacg 39820498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 44067644 - 44067596
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacg 44067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 8343084 - 8343037
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||  ||||||  ||||||||||||||||||||||||||||||    
T  8343084 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 17751773 - 17751730
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcgg 68  Q
    |||||||  ||||||| |||||||||||||||||||||||||||    
T  17751773 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 17760760 - 17760717
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcgg 68  Q
    |||||||  ||||||| |||||||||||||||||||||||||||    
T  17760760 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 27213642 - 27213595
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  27213642 atgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 12570461 - 12570511
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacacac 96  Q
    |||||||||||||| ||||||||||||||||  |||| |||||||| ||||    
T  12570461 gattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatacac 12570511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 12570687 - 12570737
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacacac 96  Q
    |||||||||||||| ||||||||||||||||  |||| |||||||| ||||    
T  12570687 gattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgatacac 12570737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 43737753 - 43737823
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    |||||||| ||||||| || |||| |||||| |||| ||||| ||||| |||| |||| ||||||||||||    
T  43737753 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacaca 43737823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 16988031 - 16987990
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgt 65  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||    
T  16988031 catgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 21465540 - 21465471
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||  ||||||||| |||| |||| ||||||||||| |||| ||||| |||||    
T  21465540 atgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacac 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21190998 - 21191067
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||||||  |||| |||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacac 21191067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 43564998 - 43564929
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||||||| |||| |||| |||||||||||    
T  43564998 atgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacac 43564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21576687 - 21576756
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||    
T  21576687 atgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacac 21576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 39268541 - 39268610
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||| |||| ||||  |||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacaca 39268610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 39698669 - 39698600
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||| || |||| |||| |||||||||||    
T  39698669 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 42893477 - 42893408
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||| |||  ||||||||||||| ||||||||||||||||  |||| |||||||||||    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacac 42893408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 14873639 - 14873588
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgt 76  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  35 gacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||  ||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 7677833 - 7677764
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  ||| || |||||||||||||||||||||||||||||| ||| | |||| |||||||||||    
T  7677833 atgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 17088399 - 17088358
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtg 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  17088399 ggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 21522858 - 21522809
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  21522858 ggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 21533424 - 21533375
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  21533424 ggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 21542138 - 21542089
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  21542138 ggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 31084445 - 31084382
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||| || ||||||| |||||||||||| |||||| |||||||||||||||| |||| |||||    
T  31084445 atgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||||| |||||||||||||||||| |||||  |||||||||| |||| |||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 19820330 - 19820376
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggaca 71  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  19820330 atgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 35017160 - 35017110
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtg 75  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  35017160 atgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 28588616 - 28588685
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||||||||||  |||||||| |||||||| |||||| || | ||||| |||| |||||||||||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacac 28588685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 17123164 - 17123097
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgaca 93  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||| || || ||||  |||||||||    
T  17123164 atgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgaca 17123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 17593660 - 17593715
Alignment:
Q  20 tagccatgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtg 75  Q
    |||| |||||| | ||||||| ||||||||| |||||||||||||| |||||||||    
T  17593660 tagctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacgtg 17593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 30098454 - 30098391
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    |||||||| ||||| | ||||||||||| |||||| |||||| |||||||||| |||| |||||    
T  30098454 atgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 30183667 - 30183620
Alignment:
Q  35 gacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||| |||| |||||||||||||| |||||||||||||||| ||||    
T  30183667 gacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtc 30183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 30502329 - 30502400
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||||| | ||| | || ||||||||| |||||| |||||||||| ||||| |||| ||||||||||||    
T  30502329 catgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacaca 30502400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 30542672 - 30542743
Alignment:
Q  24 catgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacaca 95  Q
    ||||||||| | ||| | || ||||||||| |||||| |||||||||| ||||| |||| ||||||||||||    
T  30542672 catgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacaca 30542743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 39206002 - 39205939
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacac 88  Q
    ||||||||| |||||| || ||||||  ||| |||||||||||| |||||||| ||||||||||    
T  39206002 atgaagcatagacactccttggattaaacgtatcccggtgtcgggcacgtgtcgtgtcggacac 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 21194068 - 21194122
Alignment:
Q  28 aagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    ||||| ||||||| ||||||||||||||| ||||||||| |||| ||||| ||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtc 21194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 38464315 - 38464361
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||||    
T  38464315 atgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 23015926 - 23015983
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtc 82  Q
    |||||||  ||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtc 23015983  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 23290000 - 23290049
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgt 74  Q
    |||||||| ||||| |||| ||||||| |||||||||||||| |||||||    
T  23290000 atgaagcacggacattgcttggattagacgtgtcccggtgtcagacacgt 23290049  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 27932341 - 27932288
Alignment:
Q  36 acactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    ||||| |||| ||||||||||||| |||||| |||||||||| |||| ||||||    
T  27932341 acactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 32766874 - 32766943
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||| |||||| ||| ||| ||||||||||||||||| | |  |||||||||||    
T  32766874 atgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacac 32766943  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 43554634 - 43554574
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc-atgtcggacaccgacac 94  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||  |||| |||||||||||    
T  43554634 ggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 8915 - 8846
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||| ||| ||| ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  8915 atgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacac 8846  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 71853 - 71784
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  |||||| |||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  71853 atgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 53299 - 53239
Alignment:
Q  34 ggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| || ||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  53299 ggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

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Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 3780 - 3849
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||| || ||||||||| ||||| |||| |||||| ||||    
T  3780 atgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

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Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 3052 - 2987
Alignment:
Q  29 agcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||| ||||||| |||||||||||||||| ||||||||| ||||||||| |||| || ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

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Target: scaffold0793 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 4823 - 4875
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||| |||||    
T  4823 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtc 4875  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 51940 - 51892
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||    
T  51940 atgaagcatggacattcctcggattaggcgtgtcccggtgttggacacg 51892  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 70394 - 70326
Alignment:
Q  26 tgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||| | |||||  ||||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacac 70326  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 92939 - 92875
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    |||||||| ||||||| |||||||||||||||||| |||||| |||| ||||| |||| ||||||    
T  92939 atgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

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Target: scaffold0512 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 4978 - 5047
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||  |||||| |||||||||||| |||| |  ||||||||||||||| |||| |||||||||||    
T  4978 atgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacac 5047  T

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Target: scaffold0475 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 3425 - 3356
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| ||||||||||||||||||| |||||   |||||||| |||| ||||| |||||    
T  3425 atgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacac 3356  T

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Target: scaffold0450 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 8566 - 8635
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| |||| ||||||||||| || ||||||||||||| || |||| || ||||||||    
T  8566 atgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||| || ||||||| |||||||||||||||||  ||| ||| ||||||||| |||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

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Target: scaffold0380 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 8718 - 8666
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtc 77  Q
    |||||||| ||||||| || ||||||||||| |||| ||||||||||||||||    
T  8718 atgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtc 8666  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 14644 - 14580
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacacc 89  Q
    |||||||| | ||||| ||  ||||||||||||| |||||||||||||||||| |||| ||||||    
T  14644 atgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||||||| ||||||  ||||| ||| |||||| |||| |||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 13541 - 13472
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||| | ||||||| ||||||||||| || ||||| ||||| | ||||||| |||| |||||||||||    
T  13541 atgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    |||||||| ||||||| || |||||||| ||||||  ||||| ||| |||||| |||| |||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 45492 - 45541
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgtgtcatgtcggacaccgacac 94  Q
    ||||||||| |||| ||||||| |||||||||| |||| |||||||||||    
T  45492 ggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacac 45541  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 225199 - 225252
Alignment:
Q  25 atgaagcatggacactgctcggattaggcgtgtcccggtgtcggacacgtgtca 78  Q
    |||||||| ||||||| |||| ||||||||||||| ||||||| ||||| ||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtca 225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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