View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16662_low_45 (Length: 238)
Name: NF16662_low_45
Description: NF16662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16662_low_45 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 6968582 - 6968812
Alignment:
| Q |
8 |
cgcagaaaataatcatgcatatttattaaaatagaacattttggggtgccaaggttagaatctatatagcgtgaaaccttcaagttcaaggtgtgttcgg |
107 |
Q |
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| T |
6968582 |
cgcagaaaataatcatgaatatttattaaaatagaacattttggggtgccaaggttagaatctatataacgcgaaaccttcaagttcaaggtgtgttctg |
6968681 |
T |
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| Q |
108 |
tgtttgacaccaacacaatagctagttatgtttttcttaaattattaccgatgtctatgtgtcagtgacaatatgatgtcaggtatccatgtttgtgccg |
207 |
Q |
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| T |
6968682 |
tgtttgacaccaacacaatagctagttatgtttttcttaaattattaccgatgtctatgtgtcagtgacaatatcatgtcaggtatccatgtttgtgccg |
6968781 |
T |
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| Q |
208 |
gtagttcatacttgttagttgagtggatgaa |
238 |
Q |
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| T |
6968782 |
gtagttcatacttgttagttgagtggatgaa |
6968812 |
T |
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