View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16662_low_47 (Length: 234)
Name: NF16662_low_47
Description: NF16662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16662_low_47 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 43646281 - 43646507
Alignment:
| Q |
1 |
gaaacaagccattctctctgatccactgaacttcacaaccaactgggttggatccaatgtatgcagctacaccggcatttactgtgctcaagcactagac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43646281 |
gaaacaagccattctctctgatccactgaacttcacaaccaactgggttggatccaatgtatgcagctacaccggcatttactgtgctcaagcactagac |
43646380 |
T |
|
| Q |
101 |
aacccaaacatacgcaccgtcgccggtattgatctcaaccatgccgacattgccggttatttaccggatgaactcggtcttctaacagatctcgcacttt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43646381 |
aacccaaacatacgcaccgtcgccggtattgatctcaaccatgccgacattgccggttatttaccggatgaactcggtcttctaacagatctcgcacttt |
43646480 |
T |
|
| Q |
201 |
tccacattaactccaacagattctgtg |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
43646481 |
tccacattaactccaacagattctgtg |
43646507 |
T |
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