View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16663_high_8 (Length: 265)
Name: NF16663_high_8
Description: NF16663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16663_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 22569544 - 22569315
Alignment:
| Q |
22 |
acacactatctaatatctatcatttcttctcctagtttccatccaagagaccaatatcaccatggaacaacctgcatcagattctccaacgcagcaacaa |
121 |
Q |
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| T |
22569544 |
acacactatctaatatctatcatttcttctcctagtttccatccaagagaccaatatcaccatggaacaacctgcaccagattctccaacgcagcaacaa |
22569445 |
T |
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| Q |
122 |
gaatcaatgcaagactctccttctcccccacaccaacaaccaccatccgactctcttccaccgccacagcaacaaccacgtgactctcctcagcagaaaa |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
22569444 |
gaatcaatgcaagactctccttctcccccacaccaacaaccaccatccgactctcttccactgccacagcaacaaccacgtgactctcctcagcagaaaa |
22569345 |
T |
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| Q |
222 |
tacaatctgcacaatactcaccagaataat |
251 |
Q |
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|||||||||||||| ||||||||||||||| |
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| T |
22569344 |
tacaatctgcacaaaactcaccagaataat |
22569315 |
T |
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