View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16663_low_9 (Length: 273)

Name: NF16663_low_9
Description: NF16663
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16663_low_9
NF16663_low_9
[»] chr7 (17 HSPs)
chr7 (99-254)||(2333351-2333506)
chr7 (14-96)||(17145622-17145706)
chr7 (14-97)||(668178-668263)
chr7 (14-97)||(38779527-38779612)
chr7 (15-91)||(7677422-7677500)
chr7 (21-96)||(37468976-37469053)
chr7 (14-96)||(38071898-38071982)
chr7 (14-96)||(38778854-38778938)
chr7 (15-96)||(4261561-4261644)
chr7 (14-91)||(7677773-7677852)
chr7 (14-98)||(17145836-17145922)
chr7 (25-96)||(38072266-38072339)
chr7 (21-91)||(4261210-4261282)
chr7 (14-96)||(37864271-37864355)
chr7 (14-96)||(669067-669151)
chr7 (14-96)||(41194513-41194596)
chr7 (41-96)||(37468910-37468967)
[»] chr5 (11 HSPs)
chr5 (14-96)||(33002780-33002864)
chr5 (14-96)||(8204120-8204204)
chr5 (14-96)||(15183981-15184065)
chr5 (15-98)||(15183086-15183172)
chr5 (14-91)||(687312-687391)
chr5 (15-96)||(12190123-12190206)
chr5 (14-96)||(686417-686500)
chr5 (14-96)||(8040195-8040279)
chr5 (21-91)||(33001937-33002009)
chr5 (14-96)||(36626594-36626678)
chr5 (15-96)||(8040409-8040492)
[»] chr4 (26 HSPs)
chr4 (14-96)||(11417901-11417985)
chr4 (14-96)||(26611247-26611331)
chr4 (14-96)||(11417687-11417771)
chr4 (12-96)||(38694916-38695002)
chr4 (21-97)||(39523242-39523320)
chr4 (14-96)||(9939125-9939206)
chr4 (14-96)||(36865681-36865765)
chr4 (14-96)||(39522375-39522459)
chr4 (15-96)||(10424123-10424206)
chr4 (14-95)||(26610346-26610429)
chr4 (14-91)||(29650420-29650499)
chr4 (15-96)||(31836425-31836508)
chr4 (14-90)||(36864823-36864901)
chr4 (14-96)||(21166339-21166423)
chr4 (14-96)||(29651296-29651380)
chr4 (15-96)||(21165447-21165530)
chr4 (14-91)||(38143701-38143780)
chr4 (15-96)||(45235925-45236008)
chr4 (14-96)||(9939335-9939419)
chr4 (14-96)||(10425023-10425107)
chr4 (14-78)||(38143506-38143572)
chr4 (14-97)||(45230364-45230449)
chr4 (14-96)||(38694702-38694786)
chr4 (14-55)||(31835191-31835232)
chr4 (19-55)||(11806134-11806170)
chr4 (19-82)||(36450742-36450807)
[»] chr8 (10 HSPs)
chr8 (12-96)||(5034898-5034984)
chr8 (14-96)||(34992228-34992312)
chr8 (15-96)||(34992015-34992098)
chr8 (12-96)||(41859310-41859396)
chr8 (21-96)||(5035247-5035324)
chr8 (14-91)||(32537452-32537528)
chr8 (15-97)||(38023623-38023707)
chr8 (15-96)||(41860061-41860144)
chr8 (14-97)||(32536707-32536792)
chr8 (14-89)||(37639718-37639795)
[»] chr6 (13 HSPs)
chr6 (15-91)||(33479701-33479779)
chr6 (14-97)||(3543027-3543112)
chr6 (14-96)||(22579935-22580019)
chr6 (14-96)||(33480592-33480676)
chr6 (14-95)||(15082398-15082481)
chr6 (15-96)||(33018381-33018464)
chr6 (15-91)||(22582444-22582522)
chr6 (15-91)||(22587275-22587353)
chr6 (14-96)||(7193338-7193422)
chr6 (14-96)||(15083282-15083366)
chr6 (14-91)||(3542819-3542898)
chr6 (15-98)||(33018165-33018250)
chr6 (15-96)||(7193543-7193626)
[»] chr1 (22 HSPs)
chr1 (14-97)||(16270206-16270291)
chr1 (14-97)||(193849-193934)
chr1 (14-97)||(9948851-9948936)
chr1 (14-97)||(23440829-23440914)
chr1 (14-97)||(48971704-48971789)
chr1 (14-96)||(43737942-43738026)
chr1 (14-96)||(51975191-51975275)
chr1 (15-96)||(43737729-43737812)
chr1 (14-96)||(48972409-48972493)
chr1 (14-96)||(51974437-51974521)
chr1 (14-96)||(16271112-16271196)
chr1 (14-96)||(38930312-38930396)
chr1 (15-97)||(50827056-50827139)
chr1 (21-82)||(6075988-6076051)
chr1 (14-96)||(23440617-23440701)
chr1 (14-55)||(27888714-27888755)
chr1 (14-97)||(9947994-9948079)
chr1 (15-91)||(38931212-38931290)
chr1 (14-54)||(6076831-6076871)
chr1 (59-96)||(1013483-1013520)
chr1 (14-55)||(40649531-40649572)
chr1 (19-55)||(47334242-47334278)
[»] chr3 (23 HSPs)
chr3 (15-96)||(41755499-41755582)
chr3 (14-97)||(19132562-19132647)
chr3 (14-97)||(19132776-19132861)
chr3 (15-97)||(32489945-32490029)
chr3 (14-91)||(32490159-32490238)
chr3 (15-96)||(36750402-36750485)
chr3 (14-91)||(45242071-45242150)
chr3 (14-96)||(44686255-44686338)
chr3 (14-96)||(45242951-45243035)
chr3 (14-91)||(3970997-3971076)
chr3 (14-91)||(3998805-3998884)
chr3 (21-94)||(36750047-36750122)
chr3 (14-91)||(38922748-38922827)
chr3 (21-96)||(52492250-52492327)
chr3 (14-96)||(41756396-41756480)
chr3 (15-96)||(52491891-52491969)
chr3 (14-96)||(44687127-44687211)
chr3 (15-96)||(38923630-38923713)
chr3 (15-55)||(3971867-3971907)
chr3 (15-55)||(3997971-3998011)
chr3 (14-55)||(45500516-45500557)
chr3 (68-96)||(3971239-3971267)
chr3 (68-96)||(3998614-3998642)
[»] chr2 (9 HSPs)
chr2 (14-97)||(21471918-21472003)
chr2 (14-96)||(21471017-21471101)
chr2 (14-96)||(37547998-37548082)
chr2 (15-96)||(14573261-14573344)
chr2 (14-98)||(4479666-4479752)
chr2 (14-96)||(14573963-14574047)
chr2 (15-96)||(13134318-13134401)
chr2 (15-96)||(38834601-38834684)
chr2 (15-96)||(38834387-38834470)
[»] scaffold0311 (1 HSPs)
scaffold0311 (14-96)||(124-208)
[»] scaffold0041 (2 HSPs)
scaffold0041 (14-96)||(27221-27305)
scaffold0041 (14-96)||(27539-27623)
[»] scaffold0332 (1 HSPs)
scaffold0332 (14-97)||(9222-9307)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 2333351 - 2333506
Alignment:
Q  99 tgtgtttggtgcaacacatgataagaaataacattattttttaaacattttccattaattcatgcattactcaaatcaaaccagaaaaattacaaaatta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2333351 tgtgtttggtgcaacacatgataagaaataacattattttttaaacattttccattaattcatgcattactcaaatcaaaccagaaaaattacaaaatta 2333450  T
Q  199 caaaccactgttcgtgcataagtggaaattggagaatcaattgttgtgttccataa 254  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2333451 caaaccactgttcgtgcataaatggaaattggagaatcaattgttgtgttccataa 2333506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 17145706 - 17145622
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  17145706 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 17145622  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 668263 - 668178
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  668263 gaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccc 668178  T

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Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 38779527 - 38779612
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  38779527 gaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccc 38779612  T

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Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 7677500 - 7677422
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||| ||| || |||||||||||||||||||||    
T  7677500 aatatgttcctcatttaatctaatggacatgatcaactttttcatggtgggaaagaattctcctttcccaaattaaatg 7677422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 37468976 - 37469053
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  37468976 ttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37469053  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 38071982 - 38071898
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||| ||| ||||||||||||| |||||||||| ||||    
T  38071982 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcctaaattaaatggcacc 38071898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 38778938 - 38778854
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  38778938 gaatatgctcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 38778854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 4261561 - 4261644
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| |||||||||| ||||    
T  4261561 aatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 4261644  T

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Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 7677773 - 7677852
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||  |||| ||| ||||||||||||||||||||||||    
T  7677773 gaatgtgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatg 7677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 17145836 - 17145922
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctc--agtggaaaataactctcctttcccaaattaaatgacacccg 98  Q
    |||||||||  ||||||||||||||||||||||||||||||| |  |||  |||| |||||||||||||||||||||||| ||||||    
T  17145836 gaatatgttattcatttaatctaatggacatgatcaactttcccatagtaaaaaagaactctcctttcccaaattaaatggcacccg 17145922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 38072266 - 38072339
Alignment:
Q  25 tcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| ||||||| |||||||||||||||| ||||    
T  38072266 tcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcatttcccaaattaaatggcacc 38072339  T

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Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 4261282 - 4261210
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||||||||| ||||||||||    
T  4261282 ttcctcatttaatctaatggacatgatcaactttcccatggtagaaaagaactctcctttcctaaattaaatg 4261210  T

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Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 37864271 - 37864355
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||  |||| ||| ||||||  |||||||||||||||| ||||    
T  37864271 gaatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactcttatttcccaaattaaatggcacc 37864355  T

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Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 669067 - 669151
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||| |||||||||| |||||||||||||  |  |||| ||| ||||||| |||||||||||||||| ||||    
T  669067 gaatatgttcctcatttgatctaatggatatgatcaactttcctatggtgggaaaaaactctcatttcccaaattaaatggcacc 669151  T

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Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 41194596 - 41194513
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  41194596 gaatatgttcctcatt-aatttaatggacatgattaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 41194513  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 37468967 - 37468910
Alignment:
Q  41 acatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  37468967 acatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 37468910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 33002780 - 33002864
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||||||||    
T  33002780 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 33002864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 8204204 - 8204120
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  8204204 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 8204120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15183981 - 15184065
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  15183981 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 15184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 15183172 - 15183086
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaat-aactctcctttcccaaattaaatgacacccg 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||| |||| |||||||||||||||||||||||| ||||||    
T  15183172 aatatgttcctcatttaatctaatggacatgatcaactttctcatgatgggaaataaactctcctttcccaaattaaatggcacccg 15183086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 687312 - 687391
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaacttt--ctcagtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||||||||||||    
T  687312 gaatatgttcctcatttaatctaatggacataatcaacttttccatagtggaaaagaactctcctttcccaaattaaatg 687391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 12190123 - 12190206
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| ||||||| |||||||||||||||| ||||    
T  12190123 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcttttcccaaattaaatggcacc 12190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 686500 - 686417
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  686500 gaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttcccaaattaaatggcacc 686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 8040279 - 8040195
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||   ||| ||| |||| ||||||||||||||||||| ||||    
T  8040279 gaatatattcctcatttaatctaatggacatgatcaactttcccacgatgggaaagaactgtcctttcccaaattaaatggcacc 8040195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 33002009 - 33001937
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||||  ||  |||| ||| ||||||||||||||||||||||||    
T  33002009 ttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatg 33001937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 36626594 - 36626678
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||| ||||| ||||||| ||| ||||||||||||||||| ||  |||| ||| ||||||| |||||||||||||||| ||||    
T  36626594 gaatatattccttatttaatataacggacatgatcaactttcccatggtgggaaagaactctcatttcccaaattaaatggcacc 36626678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 8040409 - 8040492
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||  ||||||||||||||||||||| ||||||| ||  |||| ||| || | ||||||||||||||||||| ||||    
T  8040409 aatatgttccctatttaatctaatggacatgattaactttcccacggtgggaaagaaatttcctttcccaaattaaatggcacc 8040492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 11417901 - 11417985
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||||||||    
T  11417901 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgacacc 11417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 26611247 - 26611331
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||||||||    
T  26611247 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatgacacc 26611331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 11417771 - 11417687
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  11417771 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 11417687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 38694916 - 38695002
Alignment:
Q  12 atgaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||  |||| ||| |||||||||||||||||||||||| ||||    
T  38694916 atgaatattttcctcatttaatctaatagacatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 38695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 39523242 - 39523320
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||| |||||    
T  39523242 ttcctcatttaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcaccc 39523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 9939206 - 9939125
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctcagtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| |||||||||||||||||||||||||||||||| || | ||||| |||||| ||||||||||||||||||||||    
T  9939206 gaatatgtttctcatttaatctaatggacatgatcaactttccca-tagaaaagaactctactttcccaaattaaatgacacc 9939125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 36865681 - 36865765
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  36865681 gaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatgtcacc 36865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 39522459 - 39522375
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  ||| |||| |||| ||||||||||||||||||||||||    
T  39522459 gaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgaaaaagaactatcctttcccaaattaaatgacacc 39522375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 10424206 - 10424123
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||  |  |||| ||| |||||||||||||||||||||||| ||||    
T  10424206 aatatgttcctcatttaatctaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 10424123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 26610429 - 26610346
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacac 95  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||  |||| ||| ||||||| ||||||||||||||||||||    
T  26610429 gaatatgttcctcatttaatctaatggacatgatcaattttcccatggtgggaaagaactctcatttcccaaattaaatgacac 26610346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 29650499 - 29650420
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||    
T  29650499 gaatatgttcctcatttaatctaatggacatgatcaactttcccaagatggaaaagaactctcatttcccaaattaaatg 29650420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 31836425 - 31836508
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||| ||||||||||| ||||    
T  31836425 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttctcaaattaaatggcacc 31836508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 36864901 - 36864823
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaat 90  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  |||  ||| |||||||||||||||||||||||    
T  36864901 gaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgagaaagaactctcctttcccaaattaaat 36864823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 21166339 - 21166423
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||| ||| |||||||||||| ||||||||||| ||||    
T  21166339 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttctcaaattaaatggcacc 21166423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 29651296 - 29651380
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  29651296 gaatatgttcctcatttaatctaatagatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 29651380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 21165530 - 21165447
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||| |||||||||||||||||||||||  |||| ||| |||| | ||||||||||||||||| ||||    
T  21165530 aatatgttcctcatttaatcaaatggacatgatcaactttctcatggtgggaaagaactattctttcccaaattaaatggcacc 21165447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 38143701 - 38143780
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||  |||| ||| ||||||| ||||||||||||||||    
T  38143701 gaatatgttcctcatttaatctaatggacatgaccaactttcccatggtgggaaagaactctcatttcccaaattaaatg 38143780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 45235925 - 45236008
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||  |||| ||| ||||||||||| |||||||||||| ||||    
T  45235925 aatatgttcctcatttaatctaatggacatgattaactttcccatggtgggaaagaactctccttttccaaattaaatggcacc 45236008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 9939335 - 9939419
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||  ||  |||| ||| ||||| |||||| ||||||||||| ||||    
T  9939335 gaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactcccctttctcaaattaaatggcacc 9939419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 10425023 - 10425107
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||  |||| ||| ||||||||||||| |||||||||| ||||    
T  10425023 gaatatattcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcacc 10425107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 38143572 - 38143506
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctccttt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||  |  |||||||| |||||||||||    
T  38143572 gaatatgttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctccttt 38143506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 45230449 - 45230364
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||  |||| ||| ||||||| |||||| ||||||||| |||||    
T  45230449 gaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcttttcccgaattaaatggcaccc 45230364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 38694786 - 38694702
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||| | ||||||||||||  ||   ||| ||| ||||||||||| |||||||||||| ||||    
T  38694786 gaatatgttcctcatttaatctaatgaatatgatcaacttttccatgctgggaaagaactctccttttccaaattaaatggcacc 38694702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 31835232 - 31835191
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  31835232 gaatatgttcctcgtttaatctaatggacataatcaactttc 31835191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 11806170 - 11806134
Alignment:
Q  19 tgttcctcatttaatctaatggacatgatcaactttc 55  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11806170 tgttcctcatttaatctaatggacatgattaactttc 11806134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 36450807 - 36450742
Alignment:
Q  19 tgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttccca 82  Q
    |||| ||||||||||| ||||||||| |||||||||| ||  |||||||| ||||| |||||||||    
T  36450807 tgttactcatttaatccaatggacataatcaactttcccatggtggaaaacaactcccctttccca 36450742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 5034984 - 5034898
Alignment:
Q  12 atgaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||| ||||    
T  5034984 atgaatatgttcctcattcaatctaatggacatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 5034898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 34992228 - 34992312
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  34992228 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 34992312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 34992098 - 34992015
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||| |||||||||||||||| ||||    
T  34992098 aatatgttcctcatttaatctaatggacatgatcaacttttccatggtggaaaataactctcgtttcccaaattaaatggcacc 34992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 41859396 - 41859310
Alignment:
Q  12 atgaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  41859396 atgaatatgttcttcatttaatctaacggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 41859310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 5035247 - 5035324
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||  |  |||||||| |||||||||||||||||||||||| ||||    
T  5035247 ttcctcatttaatctaatggacatgatcaactttcctatggtggaaaagaactctcctttcccaaattaaatggcacc 5035324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 32537452 - 32537528
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctcagtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||    
T  32537452 gaatatgttccttatttaatataatggacatgattaactttctca-tggaaaagaactctcatttcccaaattaaatg 32537528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 38023707 - 38023623
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||   ||||||| || |||||||||||||||||||||||||||    
T  38023707 aatatgttcctcatttaatctaatgaacatgatcaacttttccatgatggaaaagaattctcctttcccaaattaaatgacaccc 38023623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 41860061 - 41860144
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaacttt--ctcagtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||  |  |||  ||||||||||| ||||||||||||||||| ||||    
T  41860061 aatatgttcctcatttaatctaatggacatgatcaacttttccatagtaaaaaataactcttctttcccaaattaaatggcacc 41860144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 32536792 - 32536707
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||  |||| ||| ||||||| ||||| |||||||||| |||||    
T  32536792 gaatatgttccccatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcatttcctaaattaaatggcaccc 32536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 37639795 - 37639718
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaa 89  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||  |||| ||| ||||||||||||||||||||||    
T  37639795 gaatatgttcctcatttaatctaatgaatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaa 37639718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 33479779 - 33479701
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||    
T  33479779 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctcctttcccaaattaaatg 33479701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 3543027 - 3543112
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  3543027 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcaccc 3543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 22580019 - 22579935
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||||||| |||||||||||||||||||||||| ||||    
T  22580019 gaatatgttcctcatttaatctaatggatatgatcaactttcccatggtggaaaagaactctcctttcccaaattaaatggcacc 22579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 33480592 - 33480676
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  33480592 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 33480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 15082481 - 15082398
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacac 95  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||||||    
T  15082481 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatgacac 15082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 33018381 - 33018464
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||| ||||||    
T  33018381 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaacgacacc 33018464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 22582444 - 22582522
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| ||||||||||||||||||||||||    
T  22582444 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatg 22582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 22587275 - 22587353
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| ||||||||||||||||||||||||    
T  22587275 aatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatg 22587353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 7193422 - 7193338
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  7193422 gaatatgttcctcatttaatctaatggagatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 7193338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15083282 - 15083366
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| || ||||||||||||||||  |||| ||| |||||||||||||||||||||||| ||||    
T  15083282 gaatatgttcctcatttaatctaatagatatgatcaactttctcatggtgggaaagaactctcctttcccaaattaaatggcacc 15083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 3542898 - 3542819
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||  |||| ||| ||||||||||||||||||||||||    
T  3542898 gaatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatg 3542819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 33018250 - 33018165
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacccg 98  Q
    |||||||||||||||||||||||||||||||||||||||||  |   ||| ||| |||||||||||||||||||||||| ||||||    
T  33018250 aatatgttcctcatttaatctaatggacatgatcaactttccaatgatgggaaagaactctcctttcccaaattaaatggcacccg 33018165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 7193543 - 7193626
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||   ||||||| |||||| ||||| ||||||||||| ||||    
T  7193543 aatatattcctcatttaatctaatggatatgatcaactttcccatgatggaaaagaactctactttctcaaattaaatggcacc 7193626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 16270291 - 16270206
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  16270291 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccc 16270206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 193934 - 193849
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||  |||| ||| |||||||||||||||||||||||| |||||    
T  193934 gaatatgttcctcatttaatttaatggacatgattaactttctcatggtgggaaagaactctcctttcccaaattaaatggcaccc 193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9948851 - 9948936
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| ||||||||||||| |||||||||| |||||    
T  9948851 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcctaaattaaatggcaccc 9948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 23440829 - 23440914
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  23440829 gaatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccc 23440914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 48971789 - 48971704
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||  | ||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||    
T  48971789 gaatatgttcctcatttaatctaatttatatgatcaactttctcattgtgggaaagaactctcctttcccaaattaaatgacaccc 48971704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 43737942 - 43738026
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||| ||| |||||||||||||||||||||||| ||||    
T  43737942 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 43738026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 51975191 - 51975275
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctc--agtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| |||||||||||||||| |  |||| |||| |||||||||||||||||||||||| ||||    
T  51975191 gaatatgttcctcatttaatctaattgacatgatcaactttcccatagtgaaaaagaactctcctttcccaaattaaatggcacc 51975275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 43737812 - 43737729
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  |||| |||||||||| ||||||||||||||||| ||||    
T  43737812 aatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaataactctactttcccaaattaaatggcacc 43737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 48972409 - 48972493
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||  |||| ||| |||||||||||||||||||||||| ||||    
T  48972409 gaatatgtttctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatggcacc 48972493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 51974521 - 51974437
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||| |||||||||||||| |||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  51974521 gaatatgttcttcatttaatctaatagacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 51974437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16271112 - 16271196
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||  ||| ||||||||||||| |||||||||| ||||    
T  16271112 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgagaaagaactctcctttcctaaattaaatggcacc 16271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 38930396 - 38930312
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||| ||||||| ||||||| ||||||||||||| ||  ||| |||| |||| ||||||||||||||||||||||||    
T  38930396 gaatatgttccttatttaatttaatggatatgatcaactttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 50827056 - 50827139
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||| |||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||| ||||||||||| |||||    
T  50827056 aatatgtttctcatttaatctaatggacatgatcaactttcccatggtgggaaa-aactctcctttctcaaattaaatggcaccc 50827139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 6076051 - 6075988
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttccca 82  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||    
T  6076051 ttcctcatttaatctaatggacatgatcaactttctcatggtagaaaagaactctcctttccca 6075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 23440701 - 23440617
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaacttt--ctcagtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| ||||||||||||||||||||| |||||||||  |  ||| | ||| |||||||||||||||||||||||| ||||    
T  23440701 gaatatgtttctcatttaatctaatggacataatcaacttttccatagttggaaagaactctcctttcccaaattaaatggcacc 23440617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 27888755 - 27888714
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27888755 gaatatgttcctcatttaatctaatggacatgatcaactttc 27888714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9948079 - 9947994
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||| | ||||||||||||  ||  |||| ||| |||| | ||||||||||||||||| |||||    
T  9948079 gaatatgttcctcatttaatctaatgaatatgatcaacttttccatggtgggaaagaacttttctttcccaaattaaatggcaccc 9947994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 38931212 - 38931290
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||| || ||||||| ||||||| ||||||||||||| ||  || ||||| |||||| |||||||||||||||||    
T  38931212 aatatgtttcttatttaatttaatggatatgatcaactttcccatggtagaaaagaactcttctttcccaaattaaatg 38931290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 6076831 - 6076871
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaacttt 54  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  6076831 gaatatgttactcatttaatataatggacatgatcaacttt 6076871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 1013483 - 1013520
Alignment:
Q  59 gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  1013483 gtggaaaataacattcctttcccaaattaaatgacacc 1013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 40649531 - 40649572
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    |||| |||||| ||||||||||||||||||| ||||||||||    
T  40649531 gaatgtgttccacatttaatctaatggacattatcaactttc 40649572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 47334278 - 47334242
Alignment:
Q  19 tgttcctcatttaatctaatggacatgatcaactttc 55  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  47334278 tgtttctcatttaatctaatggacataatcaactttc 47334242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 41755582 - 41755499
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| |||||||||| |||||||  |||| ||| |||||||||||||||||||||||||||||    
T  41755582 aatatgttcctcatttaatctaatgaacatgatcaattttctcatggtgggaaaaaactctcctttcccaaattaaatgacacc 41755499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 19132647 - 19132562
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctc--agtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||| | ||| |||||||||||||||||||||||| |||||    
T  19132647 gaatatgttcctcatttaatctaatggacatgatcaactttcccatagtaggaaagaactctcctttcccaaattaaatggcaccc 19132562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 19132776 - 19132861
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||| ||| |||| ||||||||||||||||||| |||||    
T  19132776 gaatatgttcctcatttaatctaatggacatgatcaactttcccatggtgggaaagaactttcctttcccaaattaaatggcaccc 19132861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 32490029 - 32489945
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||  |||||||| || ||||||||||||||||||||| |||||    
T  32490029 aatatgttccttatttaatctaatggacatgatcaactttcccatggtggaaaagaattctcctttcccaaattaaatggcaccc 32489945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 32490159 - 32490238
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||||  ||  |||| ||| ||||||||||||||||||||||||    
T  32490159 gaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgggaaagaactctcctttcccaaattaaatg 32490238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 36750402 - 36750485
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  36750402 aatatgttcctcatttaatctaatgaacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 36750485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 45242150 - 45242071
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||||||| ||||||||||||||||    
T  45242150 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatggaaaagaactctcatttcccaaattaaatg 45242071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 44686338 - 44686255
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca-gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||| |||||||||||| ||||    
T  44686338 gaatatgtttctcatttaatctaatggacatgatcaactttctcatggtgaaaaaaactctccttttccaaattaaatggcacc 44686255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 45242951 - 45243035
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||  |||||||| |||||| ||||||||||||||||| ||||    
T  45242951 gaatatgttcctcatttaatctaatagatatgatcaactttcccatggtggaaaagaactcttctttcccaaattaaatggcacc 45243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 3971076 - 3970997
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||||  ||  ||| |||| ||||||| ||||||||||||||||    
T  3971076 gaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatg 3970997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 3998805 - 3998884
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    |||||||||||||||||||||||||||||||||||||||||  ||  ||| |||| ||||||| ||||||||||||||||    
T  3998805 gaatatgttcctcatttaatctaatggacatgatcaacttttccatggtgaaaaaaaactctcatttcccaaattaaatg 3998884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 36750122 - 36750047
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgaca 94  Q
    ||||||||||||||||||| ||||||||||||||  ||  |||||||| |||||||||||||||||||||||||||    
T  36750122 ttcctcatttaatctaatgaacatgatcaacttttccatggtggaaaagaactctcctttcccaaattaaatgaca 36750047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 38922827 - 38922748
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatg 91  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||  || | ||||||||||||||||||||||||||||    
T  38922827 gaatatgtttctcatttaatctaatggatatgatcaactttcccatggtaggaaataactctcctttcccaaattaaatg 38922748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 52492250 - 52492327
Alignment:
Q  21 ttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||| |||||||  ||  |||||||| ||||||| |||||||||||||||||||||    
T  52492250 ttcctcatttaatctaatggacatgaacaacttttccatggtggaaaagaactctcatttcccaaattaaatgacacc 52492327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 41756396 - 41756480
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||   ||| ||| ||||||||||||| || ||||||||||||    
T  41756396 gaatatgttcctcatttaatctaatgaacatgatcaactttcccatgatgggaaagaactctcctttcctaacttaaatgacacc 41756480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 52491969 - 52491891
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctcagtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||   | ||| |||||||||||||||||||||||| ||||    
T  52491969 aatatgttccttatttaatctaatggacatgatcaacttttcca---ggaaagaactctcctttcccaaattaaatggcacc 52491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 44687127 - 44687211
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||| ||||||||||||||||||| | ||||||||||||  ||  |||||||| || ||||||||||||||||||||| ||||    
T  44687127 gaatattttcctcatttaatctaatgaatatgatcaacttttccatggtggaaaagaattctcctttcccaaattaaatggcacc 44687211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 38923630 - 38923713
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||| |||| |||||||||  ||  |||| ||| ||||||| |||||||||||||||| ||||    
T  38923630 aatatgttcctcatttaatctaatgaacattatcaacttttccatggtgggaaagaactctcatttcccaaattaaatggcacc 38923713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 3971867 - 3971907
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  3971867 aatatgttcctcatttaatctaatggatatgatcaactttc 3971907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 3998011 - 3997971
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  3998011 aatatgttcctcatttaatctaatggatatgatcaactttc 3997971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 45500557 - 45500516
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttc 55  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  45500557 gaatgtgttcctcatttaatctaatggacataatcaactttc 45500516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 3971239 - 3971267
Alignment:
Q  68 aactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||    
T  3971239 aactctcctttcccaaattaaatgacacc 3971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 3998642 - 3998614
Alignment:
Q  68 aactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||    
T  3998642 aactctcctttcccaaattaaatgacacc 3998614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 21471918 - 21472003
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||||||| |||||    
T  21471918 gaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcaccc 21472003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 21471101 - 21471017
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  21471101 gaatatgttcttcatttaatctaatggacatgatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 21471017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 37548082 - 37547998
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   ||| ||| |||||||||||||||||||||||| ||||    
T  37548082 gaatatgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 37547998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 14573344 - 14573261
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  14573344 aatatattcctcatttaatctaatggacatgatcaactttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 4479666 - 4479752
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacccg 98  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||  |||  ||| |||||||||||||||||||||||| ||||||    
T  4479666 gaatatgttcctcatttaatctaatggacatgattaactttcccatggtgagaaagaactctcctttcccaaattaaatggcacccg 4479752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 14573963 - 14574047
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |  |||| ||| |||||||||||||||||||||||| ||||    
T  14573963 gaatatgtttctcatttaatctaatggatatgatcaactttcttatggtgggaaagaactctcctttcccaaattaaatggcacc 14574047  T

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Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 13134401 - 13134318
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||| |||||||||||||||||||||  |  |||| ||| |||||||||||||||||||||||| ||||    
T  13134401 aatatgttcctcatttaatttaatggacatgatcaactttcctatggtgggaaagaactctcctttcccaaattaaatggcacc 13134318  T

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Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 38834601 - 38834684
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||  || | ||| |||||||||||||||||||||||| ||||    
T  38834601 aatatgttcttcatttaatctaatggacatgatcaactttcccacggtaggaaaaaactctcctttcccaaattaaatggcacc 38834684  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 38834470 - 38834387
Alignment:
Q  15 aatatgttcctcatttaatctaatggacatgatcaactttctc--agtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |   |||| |||  || |||||||||||||||||||| ||||    
T  38834470 aatatgttcctcatttaatctaatggacatgatcaactttcccgtggtgggaaagtaccctcctttcccaaattaaatggcacc 38834387  T

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Target: scaffold0311 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 124 - 208
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||  |||| ||| |||||||||||||||||||||||| ||||    
T  124 gaatatgttcctcatttaatctaatgaacataatcaactttcccatggtgggaaagaactctcctttcccaaattaaatggcacc 208  T

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Target: scaffold0041 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 27305 - 27221
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||   ||| ||| |||||||||||||||||||||||| ||||    
T  27305 gaatgtgttcctcatttaatctaatggacatgatcaactttcccatgatgggaaagaactctcctttcccaaattaaatggcacc 27221  T

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Target: scaffold0041; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 27539 - 27623
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacacc 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| ||||||||||| |||||||||||| ||||    
T  27539 gaatatgttcctcatttaatctaatggatatgatcaactttcccatggtgggaaaaaactctccttttccaaattaaatggcacc 27623  T

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Target: scaffold0332 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9222 - 9307
Alignment:
Q  14 gaatatgttcctcatttaatctaatggacatgatcaactttctca--gtggaaaataactctcctttcccaaattaaatgacaccc 97  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||  ||| |||| ||||||||||| ||||||||||||||||||    
T  9222 gaatatgttcatcatttaatctaatggacatgatgaacttttccatggtgaaaaaaaactctccttttccaaattaaatgacaccc 9307  T

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