View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16665_high_13 (Length: 257)
Name: NF16665_high_13
Description: NF16665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16665_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 16784018 - 16784268
Alignment:
| Q |
1 |
atgtgctaagtgtaggaaacatggttttaattggtaaggcaattcataatagctcaaagctagtacttcagatactcctagaagttgttctttgcctttt |
100 |
Q |
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| T |
16784018 |
atgtgctaagtgtaggaaacatggttttaattggtaaggcaattcataatagctcaaagctagtacttcagatactcctagaagttgttctttgcctttt |
16784117 |
T |
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| Q |
101 |
gcttttcttaggtatgaattgatgttctgtctcactgtgtcccattcataaaatgttggctttgatgctagtagtcctccaaggacaattatggctagag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16784118 |
gcttttcttaggtatgaattgatgttctgtctcactgtgtcccattcataaaatgttggctttgatgctagtagtcctccaaggacaattatggctagag |
16784217 |
T |
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| Q |
201 |
gtaaacctccacatcttccaaccatttctcttcccaatttctccacctctg |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
16784218 |
gtaaacctccacatcttccaaccatttctcttcccaatttctccatctctg |
16784268 |
T |
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