View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16665_low_10 (Length: 338)
Name: NF16665_low_10
Description: NF16665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16665_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 45 - 322
Target Start/End: Original strand, 37096127 - 37096400
Alignment:
| Q |
45 |
ttgtgttcattttatattgctaaaccctaaactctaaacaattgtgagagagaaaatggaatctataataaacaagtatcatgaaaaataaacaggacta |
144 |
Q |
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| T |
37096127 |
ttgtgttcattttatattgctaaaccataaaccctaaacaattgtgagagagaaaatggaatctataataaacaagtatcatgaaaaataaacaggacta |
37096226 |
T |
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| Q |
145 |
gaagaagctcataatatacgtgtagttgatgtgcatttaccaaccaattaatatatatttaccttgaagaagcaacaccaagatgcaaagagcagtaaca |
244 |
Q |
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| T |
37096227 |
gaagaagctcataatatacgtgtagttgatgtgcatttaccaacc----aatatatatttaccttgaagaagcaacaccaagatgcaaagagcagtaaca |
37096322 |
T |
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| Q |
245 |
tataatattctatagtccttgtgcttagagaaattaagaagaggttgatagtttctttgcatgcagctgctccatatt |
322 |
Q |
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| T |
37096323 |
tataatattctatagtccttctgcttagagaaattaagaagaggttgatagtttctttgcatgcagctgctccatatt |
37096400 |
T |
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