View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16666_high_2 (Length: 560)
Name: NF16666_high_2
Description: NF16666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16666_high_2 |
 |  |
|
| [»] scaffold0294 (1 HSPs) |
 |  |  |
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Alignment Details
Target: scaffold0294 (Bit Score: 477; Significance: 0; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 18 - 538
Target Start/End: Original strand, 20508 - 21028
Alignment:
| Q |
18 |
cgacatacctcccgcttctcttcaaacgataaccaatgtctccatagttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatc |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20508 |
cgacatacctccggcttctcttcaaacgataaccaatgtctccatagttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatc |
20607 |
T |
 |
| Q |
118 |
actggaaaaccctcaggcatcacattgcttcaaagaattggcactggaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20608 |
actggaaaaccctcaggcatcacattgcttcaaagaattggcactggaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaa |
20707 |
T |
 |
| Q |
218 |
gactaaagatagcacaagagcatggtcttgttgatgatccaaaagcaactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgt |
317 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20708 |
gactaaagatagcacaagagcatagtcttgatgatgatccaaatgcaactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgt |
20807 |
T |
 |
| Q |
318 |
ttcagaggtttttactatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgtt |
417 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
20808 |
ttcagaggtttttaccatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattatt |
20907 |
T |
 |
| Q |
418 |
ggtgttggaagctttctaagtggctttctaatttctttgatagaacattttagtggcaaagatggacatgatagttggttttgtgacaatatcaataagg |
517 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20908 |
ggtgttggaagctttcttagtggatttctaatttctttaatagaacattttagtgccaaagatggtcatgatagttggttttgtgacaatatcaataagg |
21007 |
T |
 |
| Q |
518 |
cacatcttgattacttttatt |
538 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
21008 |
cacatcttgattacttttatt |
21028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 371; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 64 - 538
Target Start/End: Original strand, 11789139 - 11789613
Alignment:
| Q |
64 |
gttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatcactggaaaaccctcaggcatcacattgcttcaaagaattggcactg |
163 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||| ||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
11789139 |
gttctcttcactcctatctacgaccgtttattcgtgccactagcaagagttataactggaaagtcctcaggtattacaatgcttcaaagaattggcactg |
11789238 |
T |
 |
| Q |
164 |
gaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaaagc |
263 |
Q |
| |
|
||||||| |||| ||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11789239 |
gaatttttctatctatattcacagtagtacttgcagcctttgttgagatgaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaacgc |
11789338 |
T |
 |
| Q |
264 |
aactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgat |
363 |
Q |
| |
|
|| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11789339 |
aattgttccaatgagtatatggtggttggttcctcaatactttttgtttggagtttcagaggtttttactatggttggtcttcaggaatttttctatgat |
11789438 |
T |
 |
| Q |
364 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctttctaatttctttgatagaac |
463 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11789439 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattattggtgttggaagctttctaagtggctttctaatttctttgatagaac |
11789538 |
T |
 |
| Q |
464 |
attttagtggcaaagatggacatgatagttggttttgtgacaatatcaataaggcacatcttgattacttttatt |
538 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11789539 |
attttagtggcaaagatggacatgatagttggttttgtgacaatatcaataagacacatcttgattacttttatt |
11789613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 18 - 545
Target Start/End: Original strand, 11699265 - 11699792
Alignment:
| Q |
18 |
cgacatacctcccgcttctcttcaaacgataaccaatgtctccatagttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatc |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| | ||| | || ||| |||||||| | ||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
11699265 |
cgacatacctcctgcttctcttcaaacgataaacggtgttgcaattgttgtcttcagcgcaatctacgaccgcatatttgtgccactagcaagagctata |
11699364 |
T |
 |
| Q |
118 |
actggaaaaccctcaggcatcacattgcttcaaagaattggcactggaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaa |
217 |
Q |
| |
|
|| || ||| ||||||| |||||| |||||||||||||||||||||||||||| |||| ||||| ||||| ||| |||||||||||||||||| ||||| |
|
|
| T |
11699365 |
accggtaaaacctcaggtatcacaatgcttcaaagaattggcactggaatttttctatctatattcacagtagtacttgcagcctttgttgagaataaaa |
11699464 |
T |
 |
| Q |
218 |
gactaaagatagcacaagagcatggtcttgttgatgatccaaaagcaactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgt |
317 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||||||||| || ||||||||||||| |
|
|
| T |
11699465 |
gactaaaagtagcacaagagcatggtcttgttgatgatcctaatgcaactgttccaatgagtatagggtggttgattcctcagtatgttttgtttggtgt |
11699564 |
T |
 |
| Q |
318 |
ttcagaggtttttactatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgtt |
417 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11699565 |
ttctgaggtttttaccatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattatt |
11699664 |
T |
 |
| Q |
418 |
ggtgttggaagctttctaagtggctttctaatttctttgatagaacattttagtggcaaagatggacatgatagttggttttgtgacaatatcaataagg |
517 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
11699665 |
ggtgttggaagctttctaagtggctttctcatttcattgatagaacattttactggcaaagatggtcatgaaagttggttttgtgacaatatcaataagg |
11699764 |
T |
 |
| Q |
518 |
cacatcttgattacttttatttgttact |
545 |
Q |
| |
|
||||||||||||||||||||| |||||| |
|
|
| T |
11699765 |
cacatcttgattacttttattggttact |
11699792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 65 - 538
Target Start/End: Original strand, 11678127 - 11678600
Alignment:
| Q |
65 |
ttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatcactggaaaaccctcaggcatcacattgcttcaaagaattggcactgg |
164 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
11678127 |
ttctcttcagccctatctatgaccgcatattcgtgccgctagcaagagctatcaccggaaaaccctctggcatcacaatgcttcaaagaattggcactgg |
11678226 |
T |
 |
| Q |
165 |
aattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaaagca |
264 |
Q |
| |
|
|||||| ||||| ||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||| || ||| |
|
|
| T |
11678227 |
aatttttatatcgataatcacggtaacatttgcagcctttgttgagatgaaaagactaaaaatagcacaagaatatggtattgttgatgatcctaatgca |
11678326 |
T |
 |
| Q |
265 |
actgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgatc |
364 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11678327 |
actgtaccaatgagtatatggtggttggttcctcaatactttttgtttggagtttcagaggtttttactatggttggtcttcaggaatttttctatgatc |
11678426 |
T |
 |
| Q |
365 |
aagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctttctaatttctttgatagaaca |
464 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
11678427 |
aagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttcttagtggctttctcatttcattgatagaaca |
11678526 |
T |
 |
| Q |
465 |
ttttagtggcaaagatggacatgatagttggttttgtgacaatatcaataaggcacatcttgattacttttatt |
538 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11678527 |
ttttagtggcaaagatggacatgaaacttggttttgtgacaatatcaataaggcacattttgattacttttatt |
11678600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 65 - 538
Target Start/End: Original strand, 11686406 - 11686879
Alignment:
| Q |
65 |
ttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatcactggaaaaccctcaggcatcacattgcttcaaagaattggcactgg |
164 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
11686406 |
ttctcttcagccctatctatgaccgcatattcgtgccgctagcaagagctatcaccggaaaaccctctggcatcacaatgcttcaaagaattggcactgg |
11686505 |
T |
 |
| Q |
165 |
aattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaaagca |
264 |
Q |
| |
|
|||||| ||||| ||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||| || ||| |
|
|
| T |
11686506 |
aatttttatatcgataatcacggtaacatttgcagcctttgttgagatgaaaagactaaaaatagcacaagaatatggtattgttgatgatcctaatgca |
11686605 |
T |
 |
| Q |
265 |
actgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgatc |
364 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11686606 |
actgtaccaatgagtatatggtggttggttcctcaatactttttgtttggagtttcagaggtttttactatggttggtcttcaggaatttttctatgatc |
11686705 |
T |
 |
| Q |
365 |
aagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctttctaatttctttgatagaaca |
464 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
11686706 |
aagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttcttagtggctttctcatttcattgatagaaca |
11686805 |
T |
 |
| Q |
465 |
ttttagtggcaaagatggacatgatagttggttttgtgacaatatcaataaggcacatcttgattacttttatt |
538 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11686806 |
ttttagtggcaaagatggacatgaaacttggttttgtgacaatatcaataaggcacattttgattacttttatt |
11686879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 538
Target Start/End: Original strand, 11708719 - 11709238
Alignment:
| Q |
19 |
gacatacctcccgcttctcttcaaacgataaccaatgtct--ccatagttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtat |
116 |
Q |
| |
|
|||||||||||| |||| |||||||| |||| |||| || | || ||||||||| |||||||||| || | ||||| ||||||||||||||| ||| |
|
|
| T |
11708719 |
gacatacctccctcttcgcttcaaacaataa--aatggcttgcaattgttctcttctgccctatctatgagcacatattcgtgccactagcaagagttat |
11708816 |
T |
 |
| Q |
117 |
cactggaaaaccctcaggcatcacattgcttcaaagaattggcactggaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaa |
216 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||| |||| |
|
|
| T |
11708817 |
aactggaaagccctcaggtatcacaatgcttcaaagaattggcactggaatttttatatcaatattcatggtagtatttgcagcctttgttgagactaaa |
11708916 |
T |
 |
| Q |
217 |
agactaaagatagcacaagagcatggtcttgttgatgatccaaaagcaactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtg |
316 |
Q |
| |
|
||| |||| ||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
11708917 |
agattaaaaatagcacaaaaatatggtcttgttgatgatcctaatgcaactgtaccaatgagtatatggtggttggttcctcaatactttttgtttggag |
11709016 |
T |
 |
| Q |
317 |
tttcagaggtttttactatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgt |
416 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
11709017 |
tttctgaggtttttacaatggttggtcttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggactggcactctatttgagtattgt |
11709116 |
T |
 |
| Q |
417 |
tggtgttggaagctttctaagtggctttctaatttctttgatagaacattttagtggcaaagatggacatgatagttggttttgtgacaatatcaataag |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
11709117 |
tggtgttggaagctttctaagtggctttctcatttcattgatagaacattttagtggcaaagatggacatgaaacttggttttgtgacaatatcaataag |
11709216 |
T |
 |
| Q |
517 |
gcacatcttgattacttttatt |
538 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
11709217 |
gcacattttgattacttttatt |
11709238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 64 - 446
Target Start/End: Original strand, 11801306 - 11801688
Alignment:
| Q |
64 |
gttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatcactggaaaaccctcaggcatcacattgcttcaaagaattggcactg |
163 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| ||||||||||||||| ||| |||||||| ||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
11801306 |
gttctcttcactcctatctacgaccgtttattcgtgccactagcaagagttataactggaaagtcctcaggtattacaatgcttcaaagaattggcactg |
11801405 |
T |
 |
| Q |
164 |
gaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaaagc |
263 |
Q |
| |
|
||||||| |||| ||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11801406 |
gaatttttctatctatattcacagtagtacttgcagcctttgttgagatgaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaacgc |
11801505 |
T |
 |
| Q |
264 |
aactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgat |
363 |
Q |
| |
|
|| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11801506 |
aattgttccaatgagtatatggtggttggttcctcaatactttttgtttggagtttcagaggtttttactatggttggtcttcaggaatttttctatgat |
11801605 |
T |
 |
| Q |
364 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctttct |
446 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11801606 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattattggtgttggaagctttctaagtggctttct |
11801688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 64 - 438
Target Start/End: Original strand, 11785552 - 11785926
Alignment:
| Q |
64 |
gttctcttcagccctatctacgaccgtatatttgtgccactagcaagaagtatcactggaaaaccctcaggcatcacattgcttcaaagaattggcactg |
163 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||| | ||| ||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
11785552 |
gttctcttcagccctatctacgaccgtttattcgtgccactagcaaggaatataactggaaaaccctcaggtatcacaatgcttcaaagaattggcactg |
11785651 |
T |
 |
| Q |
164 |
gaattttcatatcaatatttacagtggtatttgcagcctttgttgagattaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaaagc |
263 |
Q |
| |
|
||||||| |||| ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11785652 |
gaatttttctatctatattcacagtagtggttgcagcctttgttgagatgaaaagactaaagatagcacaagagcatggtcttgttgatgatccaaatgc |
11785751 |
T |
 |
| Q |
264 |
aactgtaccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgat |
363 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
11785752 |
aactgttccaatgagtatatggtggttggttcctcaatactttttgtttggagtatctgaggtttttactattgttggtgttcaggaatttttctatgat |
11785851 |
T |
 |
| Q |
364 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagt |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11785852 |
caagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattattggtgttggaagctttctaagt |
11785926 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 344 - 538
Target Start/End: Original strand, 11792726 - 11792920
Alignment:
| Q |
344 |
ttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctt |
443 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
11792726 |
ttcaggaatttttctatgatcaagtcccaaatgaactaagaagcatgggacttgcactctatttgagtattattggtgttggaagctttctaagtggctt |
11792825 |
T |
 |
| Q |
444 |
tctaatttctttgatagaacattttagtggcaaagatggacatgatagttggttttgtgacaatatcaataaggcacatcttgattacttttatt |
538 |
Q |
| |
|
||| ||||| |||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11792826 |
tctcatttcattgatagaacattttactggcaaagatggtcatgaaacttggttttgtgacaatatcaataaggcacatcttgattacttttatt |
11792920 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 269 - 453
Target Start/End: Complemental strand, 4982 - 4798
Alignment:
| Q |
269 |
taccaatgagtatatggtggttgattcctcaatactttttgtttggtgtttcagaggtttttactatggttggtcttcaggaatttttctatgatcaagt |
368 |
Q |
| |
|
|||| ||||| || |||||||||||||||||||| | |||||||| || || || || ||||| ||||| ||||| || ||||||||||||||||| || |
|
|
| T |
4982 |
tacctatgagcatctggtggttgattcctcaatatgtcttgtttggagtatctgatgtctttacaatggtaggtctgcaagaatttttctatgatcaggt |
4883 |
T |
 |
| Q |
369 |
cccaaatgaactaagaagcatgggacttgcactctatttgagtattgttggtgttggaagctttctaagtggctttctaatttct |
453 |
Q |
| |
|
||| ||||| ||||||| |||| ||| | |||||||| |||||| |||| ||||| |||||||| ||| ||||||| |||||| |
|
|
| T |
4882 |
cccggatgaattaagaagtgtgggtctttccctctatttaagtatttttggggttgggagctttctgagtagctttctcatttct |
4798 |
T |
 |
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