View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16666_low_23 (Length: 250)
Name: NF16666_low_23
Description: NF16666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16666_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 12405191 - 12404953
Alignment:
| Q |
15 |
accaaccaccacttacacccaatcttcaaagttcaaactcaactcatcacttcaact--------taaaccttaaactacaagaacaagaacaaccacta |
106 |
Q |
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| T |
12405191 |
accaaccaccacttacacccaatcttcaaagttcaaactcaactcatcacttcaactcttcaacttaaaccttaaactacaagaacaagaacaaacacta |
12405092 |
T |
|
| Q |
107 |
aatatagtaacatgaatattaactttaaaaccctacttcacactttcaaatccaaaataccaaacatattattaaccaatctatattttatcacctttgc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12405091 |
aatatagtaacatgaatattaactttaaaaccctacttcacactttcaaatccaaaataccaaacatattattaaccaatctatattttatcacctttgc |
12404992 |
T |
|
| Q |
207 |
atttttcttatgtaccttcttttacttccttgctctctg |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
12404991 |
atttttcttatgtaccttcttttacttccttgctctctg |
12404953 |
T |
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