View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16667_low_2 (Length: 397)
Name: NF16667_low_2
Description: NF16667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16667_low_2 |
 |  |
|
| [»] scaffold0627 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 368; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 11 - 386
Target Start/End: Original strand, 8547454 - 8547829
Alignment:
| Q |
11 |
cagagatcgtgatcattttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatc |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547454 |
cagagatcgtgatcattttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatc |
8547553 |
T |
 |
| Q |
111 |
acaggggagttcataagacttcttgaagctactacgattcgtatgccaaatgacacagattatgttttaaatcaagaagcagctggttgtggtttctatc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547554 |
acaggggagttcataagacttcttgaagctactacgattcgtatgccaaatgacacagcttatattttaaatcaagaagcagctggttgtggtttctatc |
8547653 |
T |
 |
| Q |
211 |
ctaaaactaatgaatataaagtgataaatatttggaagaaatatgctagacgtgcaatatgtgattatgcatgtgagattgagcgtgtggtaattgttga |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547654 |
ctaaaactaatgaatataaagtgataaatatttggaagaaatatgctagacgtgcaatatgtgattatgcatgtgagattgagcgtgtggtaattgttga |
8547753 |
T |
 |
| Q |
311 |
gatacacacactcggaacaccaacatggagaaataagtggatcctcaaatttcttcttcttatcttatgtatccca |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8547754 |
gatacacacactcggaacaccaacatggagaaataagtggatcctcaaatttcttcttcttatcttatgtatccca |
8547829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 9074125 - 9074245
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |
|
|
| T |
9074125 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgaaccaactaccggaaacccttcagtgatctgcaacccagtcacaggggagttcataa |
9074224 |
T |
 |
| Q |
127 |
gacttcttgaagctactacga |
147 |
Q |
| |
|
|||||| ||||||||| |||| |
|
|
| T |
9074225 |
gacttcctgaagctaccacga |
9074245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 1599691 - 1599802
Alignment:
| Q |
31 |
atattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataagact |
130 |
Q |
| |
|
|||||||||||||||||| ||| || |||||||||||||| ||| | ||||||||| |||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
1599691 |
atattgtgaattcttgcaatggtttactttgtttgtctgacccatatttcggaaacccattagtgatctgcaacccaatcactggggagttcataagact |
1599790 |
T |
 |
| Q |
131 |
tcttgaagctac |
142 |
Q |
| |
|
|| |||| |||| |
|
|
| T |
1599791 |
tcctgaatctac |
1599802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 8529656 - 8529538
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||| ||| || |||||||| ||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
8529656 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccaatagtgatctgcaacccagtcacgggggagttcataa |
8529557 |
T |
 |
| Q |
127 |
gacttcttgaagctactac |
145 |
Q |
| |
|
|||||| |||| ||||||| |
|
|
| T |
8529556 |
gacttcctgaatctactac |
8529538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 8536220 - 8536110
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||| ||| || |||||||| |||||||||||||| ||| |||| |||||||| |||| |
|
|
| T |
8536220 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccattagtgatctgcaacccagtcactggggagtttataa |
8536121 |
T |
 |
| Q |
127 |
gacttcttgaa |
137 |
Q |
| |
|
|||||| |||| |
|
|
| T |
8536120 |
gacttcctgaa |
8536110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 2844444 - 2844514
Alignment:
| Q |
33 |
attgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaa |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||| || ||| ||||| |||||||||||| ||||| |
|
|
| T |
2844444 |
attgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaa |
2844514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 2856277 - 2856347
Alignment:
| Q |
33 |
attgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaa |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||| || ||| ||||| |||||||||||| ||||| |
|
|
| T |
2856277 |
attgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaa |
2856347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 2873887 - 2873957
Alignment:
| Q |
33 |
attgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaa |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||| || ||| ||||| |||||||||||| ||||| |
|
|
| T |
2873887 |
attgtgaattcttgcaatggcttgctttgtttatctgaaacatctatcggaagccctttagtgatttgcaa |
2873957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 2904393 - 2904463
Alignment:
| Q |
33 |
attgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaa |
103 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||| || ||||||||| |||||||| ||| ||||| |
|
|
| T |
2904393 |
attgtgaattcttgcaatggcttgctttgtttatctgaaacatctaccggaagccctttagcgatttgcaa |
2904463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 2874139 - 2874199
Alignment:
| Q |
309 |
gagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttctt |
365 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
2874139 |
gagatacacacgctcggaacaccatcatggagaaatgttgaagtggatcctcaaatttctt |
2874199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 2904643 - 2904705
Alignment:
| Q |
307 |
ttgagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttctt |
365 |
Q |
| |
|
||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
2904643 |
ttgagatacacacgctcggaacaacatcatggagaaatcttgaagtggatcctcaaatttctt |
2904705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 2856529 - 2856589
Alignment:
| Q |
309 |
gagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttctt |
365 |
Q |
| |
|
||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
2856529 |
gagatacacacgctcggaacatcatcatggagaaatgttgaagtggatcctcaaatttctt |
2856589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 8536071 - 8536024
Alignment:
| Q |
191 |
agctggttgtggtttctatcctaaaactaatgaatataaagtgataaa |
238 |
Q |
| |
|
|||||||| ||||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
8536071 |
agctggttttggtttccaacctaaaactaatgaatataaggtgataaa |
8536024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 11353898 - 11353992
Alignment:
| Q |
36 |
gtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataagact |
130 |
Q |
| |
|
|||||||| |||| ||||||||||||||| ||||| ||| ||| | ||||| |||||| | ||||||||||| | ||| ||||| |||||||| |
|
|
| T |
11353898 |
gtgaattcctgcaatggcttgctttgtttatctgagccatatactgtaaaccatttagttgtttgcaatccaattataggtgagtttataagact |
11353992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 11373495 - 11373401
Alignment:
| Q |
36 |
gtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataagact |
130 |
Q |
| |
|
|||||||| |||| ||||||||||||||| ||||| ||| ||| | ||||| |||||| | ||||||||||| | ||| ||||| |||||||| |
|
|
| T |
11373495 |
gtgaattcctgcaatggcttgctttgtttatctgagccatatactgtaaaccatttagttgtttgcaatccaattataggtgagtttataagact |
11373401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 1599940 - 1600002
Alignment:
| Q |
307 |
ttgagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttctt |
365 |
Q |
| |
|
|||||||| ||||||| ||||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
1599940 |
ttgagataaacacacttggaacaccatcctggagaaatgttgaagtggatcctcaaatttctt |
1600002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 8644684 - 8644623
Alignment:
| Q |
307 |
ttgagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttct |
364 |
Q |
| |
|
|||||||| ||||||| ||||||||| ||||||||||| |||| ||||||||||||||| |
|
|
| T |
8644684 |
ttgagataaacacacttggaacaccatcatggagaaatgctgaagtagatcctcaaatttct |
8644623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 8644769 - 8644717
Alignment:
| Q |
210 |
cctaaaactaatgaatataaagtgataaatatttggaagaaatatgctagacg |
262 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| | ||||||| |||||| |
|
|
| T |
8644769 |
cctaaaactaatgaatataaggtgatgtatatttgggacaaatatgttagacg |
8644717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 5418 - 5187
Alignment:
| Q |
12 |
agagatcgtgatcattttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatca |
111 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||| || | ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
5418 |
agagatcgcgataattttagtattgtgaattcctgtaatggcttgctatgtttgtctcaaccaactaccggaaaccctttagtgatctgcaacccattca |
5319 |
T |
 |
| Q |
112 |
caggggagttcataagacttcttgaagctactacgattcgtatgccaaatgacacagattatgttttaaatcaagaagcagctggttgtggtttctatcc |
211 |
Q |
| |
|
||||||||||||||||||| |||||||| |||| ||||||||||| ||||||| | | ||| || ||||| |||||||| |||||||||||| |
|
|
| T |
5318 |
tgggggagttcataagacttcctgaagctaatacggttcgtatgccacatgacacggttcgtgtaataggacaaga---agctggttttggtttctatcc |
5222 |
T |
 |
| Q |
212 |
taaaactaatgaatataaagtgataaatatttgga |
246 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||| |
|
|
| T |
5221 |
tacgactaatgaatataaagtgatacatatttgga |
5187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 386
Target Start/End: Complemental strand, 5135 - 5049
Alignment:
| Q |
304 |
ttgttgagatacacacactcggaacaccaacatggagaaataa----gtggatcctcaaatttcttcttcttatcttatgtatccca |
386 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | ||| | ||||||| |||||| |
|
|
| T |
5135 |
ttgtcgagatacacacactcggaacatcaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatccca |
5049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 246
Target Start/End: Complemental strand, 16717113 - 16716885
Alignment:
| Q |
15 |
gatcgtgatcattttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacag |
114 |
Q |
| |
|
||||||||| | ||| ||||||||||||| || | ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||| ||| | |
|
|
| T |
16717113 |
gatcgtgataagtttaatattgtgaattcatgtaatggcttgctatgtttgtctgaaccaactactggaaaccctatagtgatctgcaacccattcatgg |
16717014 |
T |
 |
| Q |
115 |
gggagttcataagacttcttgaagctactacgattcgtatgccaaatgacacagattatgttttaaatcaagaagcagctggttgtggtttctatcctaa |
214 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||| |||||||||| ||||||| | | |||| || ||||| |||||||| ||||||||||||||| |
|
|
| T |
16717013 |
gggaattcataagacttcctgaaactactacagttcgtatgccgaatgacagggttcatgtaataggacaaga---agctggttttggtttctatcctaa |
16716917 |
T |
 |
| Q |
215 |
aactaatgaatataaagtgataaatatttgga |
246 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
16716916 |
aactaatgaatataaagtgatacatatttgga |
16716885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 386
Target Start/End: Complemental strand, 16716836 - 16716750
Alignment:
| Q |
304 |
ttgttgagatacacacactcggaacaccaacatggagaaataa----gtggatcctcaaatttcttcttcttatcttatgtatccca |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| | ||||||| |||||| |
|
|
| T |
16716836 |
ttgttgagatacacacactcggaacaccaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatccca |
16716750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 48361239 - 48361355
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||| ||| || |||||||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
48361239 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgatccatctttgggaaacccgttagtgatctgcaacccagtcacaggggagttcataa |
48361338 |
T |
 |
| Q |
127 |
gacttcttgaagctact |
143 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
48361339 |
gacttcctgaatctact |
48361355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 35780544 - 35780427
Alignment:
| Q |
31 |
atattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaa-ccctttagtgatctgcaatccaatcacaggggagttcataagac |
129 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||||||||| | ||| ||||| ||| |||||||||||| ||||| ||| |||| |||||||||||||||| |
|
|
| T |
35780544 |
atattgtcaattcttgcaatggtttgctttgtttgtctaatccatataccgaaaaaccctttagtgatttgcaacccagtcacgggggagttcataagac |
35780445 |
T |
 |
| Q |
130 |
ttcttgaagctactacga |
147 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
35780444 |
ttcctgaagctactacga |
35780427 |
T |
 |
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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 35780383 - 35780336
Alignment:
| Q |
191 |
agctggttgtggtttctatcctaaaactaatgaatataaagtgataaa |
238 |
Q |
| |
|
|||||||| ||||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
35780383 |
agctggttttggtttccaacctaaaactaatgaatataaggtgataaa |
35780336 |
T |
 |
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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 48361388 - 48361435
Alignment:
| Q |
191 |
agctggttgtggtttctatcctaaaactaatgaatataaagtgataaa |
238 |
Q |
| |
|
|||||||| ||||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
48361388 |
agctggttttggtttccaacctaaaactaatgaatataaggtgataaa |
48361435 |
T |
 |
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Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 9443817 - 9443699
Alignment:
| Q |
27 |
tttgatattgtgaattcttgcagtggcttgctttgtttgtctgaaccaactaccggaaaccctttagtgatctgcaatccaatcacaggggagttcataa |
126 |
Q |
| |
|
|||||||||||||||||||||| ||| || |||||||||||||| ||| || |||||||| ||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
9443817 |
tttgatattgtgaattcttgcaatggtttactttgtttgtctgacccatcttttggaaacccaatagtgatctgcaacccagtcacgggggagttcataa |
9443718 |
T |
 |
| Q |
127 |
gacttcttgaagctactac |
145 |
Q |
| |
|
|||||| |||| ||||||| |
|
|
| T |
9443717 |
gacttcctgaatctactac |
9443699 |
T |
 |
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