View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16668_high_42 (Length: 261)
Name: NF16668_high_42
Description: NF16668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16668_high_42 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 26875297 - 26875538
Alignment:
| Q |
10 |
attcatgagtattattttgatttgatctatgccaaagaaccacaaacgaccttgttctcaaggcaatgtttagaaaaacaaggatttgcctaaaatctgg |
109 |
Q |
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| T |
26875297 |
attcatgagtattattttgatttgatctatgccaaagaaccacaaacgaccttgttctcaaggcaatgtttagaaaaacaaggatttgcctaaaatctgg |
26875396 |
T |
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| Q |
110 |
taaaaatgatacggaaattaaataggttaattgtatttccagcgaaatgtacctttagttcagaaattgtgtgcctcttttctctgttttctcttgtcat |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26875397 |
taaaaatgatacggaaattaaataggttaattgtatttccagcgaaatgtacctttagttcagaaattgtgtgcctcttttctctgttttctcttgtcat |
26875496 |
T |
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| Q |
210 |
gtgtcttcacgtgttaatgataatacgatgatacctcctatg |
251 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||| |
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| T |
26875497 |
gtgtgttcacgtgttaatgataatacgatgatacctcctatg |
26875538 |
T |
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