View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16668_low_27 (Length: 336)

Name: NF16668_low_27
Description: NF16668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16668_low_27
NF16668_low_27
[»] chr5 (20 HSPs)
chr5 (18-224)||(6768435-6768639)
chr5 (239-329)||(32697679-32697769)
chr5 (240-329)||(38900648-38900737)
chr5 (239-329)||(4966819-4966909)
chr5 (239-329)||(4967224-4967314)
chr5 (262-328)||(15115546-15115612)
chr5 (248-326)||(32305830-32305908)
chr5 (239-329)||(15029762-15029852)
chr5 (284-329)||(18150177-18150222)
chr5 (284-329)||(21371149-21371194)
chr5 (239-326)||(20266371-20266458)
chr5 (239-329)||(19291359-19291449)
chr5 (239-316)||(14340401-14340478)
chr5 (239-328)||(14340864-14340953)
chr5 (289-329)||(5162022-5162062)
chr5 (277-329)||(18149774-18149826)
chr5 (289-329)||(28289737-28289777)
chr5 (277-329)||(38901093-38901145)
chr5 (239-306)||(16753046-16753113)
chr5 (262-329)||(28290097-28290164)
[»] chr7 (31 HSPs)
chr7 (239-326)||(787242-787329)
chr7 (239-329)||(7732491-7732581)
chr7 (239-329)||(2758151-2758241)
chr7 (239-328)||(5334273-5334362)
chr7 (262-329)||(5333906-5333973)
chr7 (239-328)||(24929762-24929851)
chr7 (284-329)||(25637245-25637290)
chr7 (284-329)||(35161255-35161300)
chr7 (239-328)||(48247590-48247679)
chr7 (239-326)||(34595228-34595315)
chr7 (239-329)||(26026320-26026410)
chr7 (239-329)||(27245206-27245296)
chr7 (239-329)||(39388721-39388811)
chr7 (158-226)||(8140001-8140069)
chr7 (289-329)||(9181865-9181905)
chr7 (289-329)||(14311368-14311408)
chr7 (289-329)||(28687952-28687992)
chr7 (239-322)||(11973862-11973945)
chr7 (286-329)||(16081752-16081795)
chr7 (262-329)||(25637651-25637718)
chr7 (262-329)||(27245657-27245724)
chr7 (262-328)||(9181558-9181624)
chr7 (262-328)||(15712391-15712457)
chr7 (277-326)||(4477743-4477792)
chr7 (239-324)||(39136991-39137076)
chr7 (277-329)||(11971375-11971427)
chr7 (262-329)||(7732940-7733007)
chr7 (262-329)||(48248045-48248112)
chr7 (263-329)||(26048399-26048465)
chr7 (279-328)||(9394184-9394233)
chr7 (277-329)||(26047998-26048050)
[»] chr2 (32 HSPs)
chr2 (239-329)||(11540091-11540181)
chr2 (239-329)||(42192243-42192333)
chr2 (239-325)||(42192700-42192786)
chr2 (239-327)||(43160012-43160100)
chr2 (239-329)||(649530-649620)
chr2 (239-329)||(38007953-38008043)
chr2 (239-329)||(44220098-44220188)
chr2 (239-329)||(63417-63507)
chr2 (239-329)||(33920615-33920705)
chr2 (284-329)||(15550721-15550766)
chr2 (263-328)||(43216163-43216228)
chr2 (239-329)||(4355758-4355848)
chr2 (239-329)||(4808882-4808972)
chr2 (239-328)||(6949898-6949987)
chr2 (239-328)||(25336054-25336143)
chr2 (262-329)||(62983-63050)
chr2 (239-326)||(28143485-28143572)
chr2 (262-329)||(38008404-38008471)
chr2 (239-329)||(9330248-9330338)
chr2 (239-329)||(20128190-20128280)
chr2 (284-329)||(13399470-13399515)
chr2 (284-329)||(16175803-16175848)
chr2 (277-329)||(20127777-20127829)
chr2 (288-328)||(32418600-32418640)
chr2 (262-329)||(11539663-11539730)
chr2 (262-328)||(32418185-32418249)
chr2 (239-329)||(6949454-6949544)
chr2 (239-329)||(13315496-13315586)
chr2 (239-329)||(16953387-16953477)
chr2 (239-329)||(31797230-31797320)
chr2 (262-326)||(20495219-20495283)
chr2 (277-329)||(43160464-43160516)
[»] chr1 (33 HSPs)
chr1 (239-326)||(17641825-17641912)
chr1 (239-329)||(50304442-50304532)
chr1 (239-329)||(10278551-10278641)
chr1 (239-329)||(16298685-16298775)
chr1 (239-325)||(29438933-29439019)
chr1 (239-329)||(39485068-39485158)
chr1 (239-329)||(45048158-45048248)
chr1 (284-329)||(30786820-30786865)
chr1 (277-329)||(2868161-2868213)
chr1 (284-328)||(52335964-52336008)
chr1 (262-329)||(8229663-8229730)
chr1 (239-329)||(8230094-8230184)
chr1 (239-329)||(34555382-34555472)
chr1 (239-329)||(37421163-37421253)
chr1 (18-80)||(10915644-10915707)
chr1 (262-329)||(29439375-29439442)
chr1 (262-329)||(34555835-34555902)
chr1 (262-329)||(44582083-44582150)
chr1 (239-329)||(1837508-1837598)
chr1 (239-329)||(2867914-2868004)
chr1 (263-329)||(10279000-10279066)
chr1 (289-329)||(444004-444044)
chr1 (289-329)||(4080074-4080114)
chr1 (258-326)||(48174178-48174246)
chr1 (262-329)||(21938589-21938656)
chr1 (239-329)||(37421397-37421488)
chr1 (262-329)||(37505093-37505160)
chr1 (239-326)||(50926697-50926784)
chr1 (239-329)||(44954229-44954319)
chr1 (278-328)||(50305239-50305289)
chr1 (239-328)||(23340186-23340275)
chr1 (277-326)||(23526699-23526748)
chr1 (289-326)||(50926283-50926320)
[»] scaffold0097 (1 HSPs)
scaffold0097 (239-329)||(46269-46359)
[»] chr8 (27 HSPs)
chr8 (239-329)||(6115564-6115654)
chr8 (239-329)||(7910619-7910709)
chr8 (239-329)||(15255856-15255946)
chr8 (239-329)||(18050044-18050134)
chr8 (239-328)||(7911070-7911159)
chr8 (239-328)||(28254880-28254969)
chr8 (262-329)||(42036225-42036292)
chr8 (239-329)||(16578111-16578201)
chr8 (239-329)||(41260714-41260804)
chr8 (239-328)||(35427266-35427355)
chr8 (239-328)||(42035775-42035864)
chr8 (239-329)||(599535-599625)
chr8 (262-328)||(35693894-35693960)
chr8 (284-329)||(34799536-34799581)
chr8 (262-329)||(18428215-18428282)
chr8 (262-329)||(28254451-28254518)
chr8 (239-329)||(9796729-9796819)
chr8 (292-329)||(26252865-26252902)
chr8 (158-189)||(4799320-4799351)
chr8 (262-329)||(9797180-9797247)
chr8 (278-329)||(15256284-15256335)
chr8 (262-329)||(18049616-18049683)
chr8 (294-329)||(18674206-18674241)
chr8 (278-329)||(41260313-41260364)
chr8 (262-328)||(2208740-2208806)
chr8 (239-329)||(5731265-5731355)
chr8 (279-328)||(35694332-35694381)
[»] chr6 (10 HSPs)
chr6 (239-329)||(28636295-28636385)
chr6 (262-329)||(5114494-5114561)
chr6 (286-329)||(5120922-5120965)
chr6 (262-329)||(24640638-24640705)
chr6 (239-329)||(31574178-31574268)
chr6 (262-329)||(25468875-25468942)
chr6 (239-329)||(31073595-31073685)
chr6 (262-329)||(25472466-25472533)
chr6 (239-329)||(35163640-35163730)
chr6 (289-329)||(29891133-29891173)
[»] chr4 (38 HSPs)
chr4 (239-329)||(19528872-19528962)
chr4 (239-329)||(46737108-46737198)
chr4 (239-329)||(55677411-55677501)
chr4 (284-328)||(6617116-6617160)
chr4 (262-329)||(35193334-35193401)
chr4 (239-326)||(54440574-54440661)
chr4 (239-329)||(34789836-34789926)
chr4 (239-329)||(34807119-34807209)
chr4 (243-329)||(45838554-45838640)
chr4 (286-329)||(24851919-24851962)
chr4 (262-329)||(28465107-28465174)
chr4 (239-329)||(26974698-26974788)
chr4 (239-329)||(33689832-33689922)
chr4 (239-328)||(21034691-21034780)
chr4 (262-329)||(14440281-14440348)
chr4 (262-329)||(21034261-21034328)
chr4 (262-329)||(28465534-28465601)
chr4 (262-329)||(34789408-34789475)
chr4 (262-329)||(54441022-54441089)
chr4 (239-329)||(14439831-14439921)
chr4 (262-328)||(16214949-16215015)
chr4 (239-329)||(56077777-56077867)
chr4 (264-329)||(12593052-12593117)
chr4 (239-328)||(12593477-12593566)
chr4 (239-328)||(28166007-28166096)
chr4 (277-329)||(17504412-17504464)
chr4 (239-326)||(229164-229251)
chr4 (262-329)||(6616698-6616765)
chr4 (262-329)||(35643581-35643648)
chr4 (262-329)||(41114183-41114250)
chr4 (239-329)||(41608377-41608465)
chr4 (291-329)||(40160149-40160187)
chr4 (239-329)||(45839003-45839092)
chr4 (277-326)||(18965181-18965230)
chr4 (284-329)||(36168377-36168422)
chr4 (262-327)||(41608870-41608935)
chr4 (277-329)||(26974324-26974376)
chr4 (292-328)||(30597973-30598009)
[»] chr3 (48 HSPs)
chr3 (239-329)||(52236819-52236909)
chr3 (239-329)||(52237270-52237360)
chr3 (239-329)||(52375784-52375874)
chr3 (239-329)||(330289-330379)
chr3 (239-329)||(22370599-22370689)
chr3 (239-329)||(32730392-32730482)
chr3 (239-329)||(40275096-40275186)
chr3 (239-329)||(40839105-40839195)
chr3 (239-321)||(41998689-41998771)
chr3 (239-329)||(51827960-51828050)
chr3 (262-329)||(34105103-34105170)
chr3 (262-329)||(38535748-38535815)
chr3 (239-329)||(16689361-16689451)
chr3 (239-329)||(40275547-40275636)
chr3 (239-329)||(40838655-40838745)
chr3 (239-329)||(43678737-43678827)
chr3 (239-329)||(51828542-51828632)
chr3 (262-327)||(49720397-49720462)
chr3 (240-329)||(55389609-55389698)
chr3 (277-329)||(52375368-52375420)
chr3 (262-329)||(329872-329939)
chr3 (239-318)||(25534893-25534972)
chr3 (239-326)||(36701109-36701196)
chr3 (239-326)||(37076131-37076217)
chr3 (262-329)||(41998255-41998322)
chr3 (262-329)||(46013448-46013515)
chr3 (262-329)||(47431722-47431789)
chr3 (262-329)||(49951572-49951639)
chr3 (262-329)||(51473309-51473376)
chr3 (239-329)||(27199705-27199795)
chr3 (239-329)||(30513725-30513814)
chr3 (239-329)||(43222393-43222483)
chr3 (239-329)||(49720814-49720904)
chr3 (239-325)||(49952003-49952089)
chr3 (239-329)||(51828993-51829083)
chr3 (239-329)||(55390050-55390140)
chr3 (239-327)||(33412609-33412697)
chr3 (277-329)||(43222843-43222895)
chr3 (289-329)||(44676525-44676565)
chr3 (278-329)||(2044313-2044364)
chr3 (262-329)||(2051321-2051388)
chr3 (262-329)||(14654225-14654292)
chr3 (239-326)||(14654645-14654732)
chr3 (278-329)||(38535351-38535402)
chr3 (262-329)||(44676925-44676992)
chr3 (239-329)||(16701245-16701335)
chr3 (239-329)||(37075689-37075779)
chr3 (277-329)||(8874139-8874191)
[»] scaffold0007 (2 HSPs)
scaffold0007 (239-326)||(205823-205910)
scaffold0007 (239-326)||(210793-210880)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 6768639 - 6768435
Alignment:
Q  18 aaaatagtagtataatacaaagattttgatgaaaaa-ttagtgtttgtcatcaaagcaaattgaaaagggacggatttattataacgcagttaaaaccta 116  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6768639 aaaatagtagtataatacaaagattttgataaaaaaattagtgtttgccatcaaagcaaattgaaaagggacggatttattataacgcagttaaaaccta 6768540  T
Q  117 atttttgttgagtttcaaaagtaacaaaatatatccaaaattaaaataagagatgagaaaagagaaattgaacgcatcatatctatgcgtaaacccctca 216  Q
    ||||  ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||    
T  6768539 attt--gttgagtttcaaa-gtaacaaaatatatccaaaattaaaataagagacgggaaaagagaaattgaacgcacaatatctatgcgtaaacccctca 6768443  T
Q  217 aataataa 224  Q
    ||||||||    
T  6768442 aataataa 6768435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 32697769 - 32697679
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||||| | ||||||| |||||  |||||  ||||||||||||||||||||||| | ||||||||||||||||||||    
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatg 32697679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 38900648 - 38900737
Alignment:
Q  240 taattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||| |||| ||| ||| ||||||| |||||  |||||| | ||||||||||||||||||||| ||||||||||||||| ||||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 38900737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 4966819 - 4966909
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||||| |||||  ||||||  || || |||||||||||||||| ||||||||||||||||||||||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatg 4966909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 4967314 - 4967224
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  | |||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  4967314 ttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 4967224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 15115612 - 15115546
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||  |||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  15115612 attttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat 15115546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 32305830 - 32305908
Alignment:
Q  248 ttttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||| ||||||| |||||||||| ||  ||||||  || ||||||||||||||||||| |||||||||||||||||||    
T  32305830 tttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactat 32305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 15029852 - 15029762
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| |||| ||||| |||||||||||| |||||||||| |||||||||||    
T  15029852 ttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg 15029762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 18150222 - 18150177
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  18150222 ggtcctacctcttttaaatcgaacaaaatcatccctaaactatatg 18150177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 21371194 - 21371149
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  21371194 ggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatg 21371149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 20266458 - 20266371
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||| || |||| ||| ||||||||||| || ||| |||||| |||| |  |||||| |||||||| |||||||||||||||||||    
T  20266458 ttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 19291359 - 19291449
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| |  |||||||| |||||  | |||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 19291449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 14340401 - 14340478
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtc 316  Q
    |||||||||||||| ||| |   |||||||||||||  |||||| ||||||| || |||||||||||| |||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 14340953 - 14340864
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||||||||||||| ||  | | ||||||| |||||  |||||  |||| ||| |||||||||||||| |||||||||| ||||||||||    
T  14340953 ttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatat 14340864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 5162062 - 5162022
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  5162062 tacctcttttaaatcgaacaaaatcgtccctaaattatatg 5162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 18149774 - 18149826
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  18149774 cgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 18149826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 28289737 - 28289777
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  28289737 tacctcttttaaatcgaacaaaatcgtccctaaattatatg 28289777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 38901145 - 38901093
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||||||||  |||||||||||| |||||||||| |||||||||||    
T  38901145 cgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatg 38901093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 16753113 - 16753046
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaa 306  Q
    |||||||||||||| ||||||| ||||||| |||||  |||||| ||| || ||||||| ||||||||    
T  16753113 ttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaa 16753046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 28290164 - 28290097
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| |  |||||||||||| |||||||||| |||||||||||    
T  28290164 attttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatg 28290097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 787329 - 787242
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||  ||||||||||| |||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 7732491 - 7732581
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | |||||||||||||  |||||  ||||||||||||||||||||||| |||||||||| |||||||||||    
T  7732491 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 7732581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 2758241 - 2758151
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| |||||| ||||||  |||||| ||| ||||||||||||||||||| |||||||||| |||||||||||    
T  2758241 ttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg 2758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 5334362 - 5334273
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| ||  ||||||| |||||  ||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 5333906 - 5333973
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  5333906 attttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg 5333973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 24929851 - 24929762
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  |||| ||||||||||||||| || |||||||||||||||||||||    
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatat 24929762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 25637245 - 25637290
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  25637245 ggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 25637290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 35161300 - 35161255
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35161300 ggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 35161255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 48247590 - 48247679
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | |||||||||||||  |||||  |||||||||||||||||||| || ||||||||||||||| |||||    
T  48247590 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatat 48247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 34595315 - 34595228
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| |||||| | |||||||||||||| |||||||||||||||||||    
T  34595315 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactat 34595228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 26026320 - 26026410
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | ||||||||| || ||  |||||  |||| |||||||||||||||||| |||||||||| |||||||||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatg 26026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 27245206 - 27245296
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||| |||| |||||    
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatg 27245296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 39388811 - 39388721
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||   |||||||||||||||||||||| ||||||||| ||||||||||||    
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg 39388721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 8140001 - 8140069
Alignment:
Q  158 taaaataagagatgagaaaagagaaattgaacgcatcatatctatgcgtaaacccctcaaataataagg 226  Q
    |||||||||||||||||||||||||| ||||||||  |||| |||| | |||||||||||  |||||||    
T  8140001 taaaataagagatgagaaaagagaaactgaacgcacaatatttatgtggaaacccctcaacaaataagg 8140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 9181905 - 9181865
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  9181905 tacctcttttaaatcgaacaaaatcgtccctaaactatatg 9181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 14311368 - 14311408
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  14311368 tacctcttttaaattgaataaaatcgtccctaaactatatg 14311408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 28687992 - 28687952
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  28687992 tacctcttttaaatcgaacaaaatcgtccctaaactatatg 28687952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 11973945 - 11973862
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaa 322  Q
    |||||||||||||| ||| | | ||||||| |||| | |||||  ||| ||||||||||||||| ||| |||||||||||||||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaa 11973862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 16081795 - 16081752
Alignment:
Q  286 tcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  16081795 tcctacctcttttaaatcgaacaaaatcatccctaaactatatg 16081752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 25637718 - 25637651
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  25637718 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 25637651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 27245724 - 27245657
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| ||||||| || |||||||||||| |||||||||| |||| ||||||    
T  27245724 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatg 27245657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 9181558 - 9181624
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| ||||||||||    
T  9181558 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 9181624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 15712391 - 15712457
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| ||||||||||    
T  15712391 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 15712457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 4477743 - 4477792
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||||    
T  4477743 cgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactat 4477792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 39137076 - 39136991
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaact 324  Q
    ||||||||| ||||  || ||||||||||| |  ||  |||||| |||||| |||||||||||||||| |||||||||| ||||||    
T  39137076 ttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 11971375 - 11971427
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  11971375 cgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 11971427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 7733007 - 7732940
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| | ||||| || |||||||||||| |||||||||| |||||||||||    
T  7733007 attttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 7732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 48248112 - 48248045
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  | |||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  48248112 attttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 48248045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 26048465 - 26048399
Alignment:
Q  263 ttttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||||  |||||  |||||||||||||||||||| || ||||| |||| |||||||||||    
T  26048465 ttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatg 26048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 9394233 - 9394184
Alignment:
Q  279 aaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||| |||||||||| ||| |||||||| |||| ||||||||||||||||    
T  9394233 aaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatat 9394184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 26047998 - 26048050
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||| || || |||||||||||||||||| |||| |||||||||||    
T  26047998 cgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatg 26048050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 11540181 - 11540091
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| | |||| ||||||| ||||||| |||||  |||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  11540181 ttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatg 11540091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 42192243 - 42192333
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 42192333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 42192786 - 42192700
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaacta 325  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  42192786 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 42192700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 43160012 - 43160100
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactata 327  Q
    |||||||||||||| ||| | | |||||||||||||  |||||  |||| |||||||||||||||||| ||||||||||||||||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactata 43160100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 649530 - 649620
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | || |||| |||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  649530 ttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 649620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 38007953 - 38008043
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  38007953 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 38008043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 44220188 - 44220098
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||||||| ||| ||||||| |||||  |||||| |||| ||||| ||||||||| || ||||||||||||||||||||||    
T  44220188 ttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg 44220098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 63507 - 63417
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| ||| | ||||||||| |||||  |||||| |||| || |||||||||||| || ||||||||||||||||||||||    
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatg 63417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 33920615 - 33920705
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  | || |||||||||||||||||| ||||||||||||||||||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 33920705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 15550721 - 15550766
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  15550721 ggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 15550766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 43216228 - 43216163
Alignment:
Q  263 ttttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||||| |||||  |||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  43216228 ttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 43216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 4355758 - 4355848
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| | |||  |||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 4355848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 4808882 - 4808972
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||  | | ||||||| |||||  |||||  | ||||||||||||||||||||| |||||||||| |||||||||||    
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatg 4808972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 6949987 - 6949898
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  |||||||| |||||||||| ||| |||||||||||||||||||||    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatat 6949898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 25336143 - 25336054
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  |||||||| |||||||||||||| ||||||||||||||| |||||    
T  25336143 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatat 25336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 62983 - 63050
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||||||||| ||| |||||||| |||||||||| |||||||||||    
T  62983 attttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatg 63050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 28143572 - 28143485
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||| || |||| ||| ||| ||||||| || ||  |||||| |||||| ||||||| |||||||| |||||||||||||||||||    
T  28143572 ttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactat 28143485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 38008471 - 38008404
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  38008471 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 38008404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 9330338 - 9330248
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||   ||| |||||||||||||||||| ||||||||||| ||||||||||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatg 9330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 20128280 - 20128190
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||| | |||||  |||||  |||||||||||||||||||| || |||||||||| |||||||||||    
T  20128280 ttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatg 20128190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 13399470 - 13399515
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||    
T  13399470 ggtcatacctcttttaaatggaacaaaatcgtccctaaactatatg 13399515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 16175848 - 16175803
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||    
T  16175848 ggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatg 16175803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 20127777 - 20127829
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  20127777 cgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 20127829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 32418640 - 32418600
Alignment:
Q  288 ctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  32418640 ctacctcttttaaatcgaacaaaatcgtccttaaactatat 32418600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 11539663 - 11539730
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||||||  | |||||||||||| |||||||||| |||||||||||    
T  11539663 attttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatg 11539730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 32418185 - 32418249
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||  |||||  ||||||||||||||  ||||||| |||||||||||||||||||||    
T  32418185 attttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat 32418249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 6949454 - 6949544
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| |   |||||||  ||||  |||||| ||||||| || |||||||||||| |||||||||| | |||||||||    
T  6949454 ttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatg 6949544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 13315496 - 13315586
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||||||| |   ||||||| |||||   ||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 13315586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 16953477 - 16953387
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||   ||||  ||||||||||||||||||||||| ||||  ||||||||| ||||||    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatg 16953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 31797320 - 31797230
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| || ||  |||||| |||| | ||||||| |||||||| |||| |||||||||||||||||    
T  31797320 ttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg 31797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 20495219 - 20495283
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||| |||||  |||||| | || | ||||||||||||| || |||||||||||||||||||    
T  20495219 attttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 43160516 - 43160464
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||| || ||||||||||||  ||||||||| |||||||||||    
T  43160516 cgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatg 43160464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 17641912 - 17641825
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat 17641825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 50304442 - 50304532
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| |||| |||||||||||||||||| ||||||||| ||||||||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 10278551 - 10278641
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  | ||||||||||||||||||||| ||||||||||||||||||||||    
T  10278551 ttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 10278641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 16298685 - 16298775
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| | | | | ||||||| |||||  |||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  16298685 ttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 16298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 29438933 - 29439019
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaacta 325  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  29438933 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 29439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 39485068 - 39485158
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| |||||||  | ||  |||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg 39485158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 45048158 - 45048248
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||| |||||| ||| ||||||||||||||| ||| |||||||||| |||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg 45048248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 30786820 - 30786865
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  30786820 ggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 30786865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 2868213 - 2868161
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2868213 cgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatg 2868161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 52336008 - 52335964
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  52336008 ggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 52335964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 8229663 - 8229730
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| | | |||| |||||||||||||||||||||||| ||||||||||||    
T  8229663 attttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatg 8229730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 8230184 - 8230094
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||  ||| ||||||| | | |  |||||| |||  |||||||||||||||||| ||||||||||||||||||||||    
T  8230184 ttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatg 8230094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 34555382 - 34555472
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | |||||||  ||||  |||||  ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  34555382 ttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatg 34555472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 37421163 - 37421253
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| ||| |  |||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 37421253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 10915707 - 10915644
Alignment:
Q  18 aaaatagtagtataatacaaagattttgatgaaaaatt-agtgtttgtcatcaaagcaaattga 80  Q
    ||||||| |||| |||||||||||||| |||||||| | ||||||| |||||||||||||||||    
T  10915707 aaaatagcagtaaaatacaaagatttttatgaaaaaatgagtgtttttcatcaaagcaaattga 10915644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 29439442 - 29439375
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| | ||||| || |||||||||||| |||||||||| |||||||||||    
T  29439442 attttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 29439375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 34555902 - 34555835
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  34555902 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 34555835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 44582083 - 44582150
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  44582083 attttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatg 44582150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 1837508 - 1837598
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | |||||||||||||  |||||  | || || ||||||||||||||| ||||| ||||||||||||||||    
T  1837508 ttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatg 1837598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 2867914 - 2868004
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||||||| ||||||| |||||  |||||| | || || ||||||||||||||| ||||| |||  |||||||||||    
T  2867914 ttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg 2868004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 10279066 - 10279000
Alignment:
Q  263 ttttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  10279066 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 10279000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 444044 - 444004
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  444044 tacctcttttaaatcgaacaaaatcgttcctaaactatatg 444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 4080074 - 4080114
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  4080074 tacctattttaaatcgaacaaaatcgtccctaaactatatg 4080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 48174246 - 48174178
Alignment:
Q  258 tcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||||||||||| ||  |||||||||| ||  |||||||||||| || |||| ||||||||||||||    
T  48174246 tcgtattttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaactat 48174178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 21938589 - 21938656
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| | || || || |||||||||||| |||||||||| |||||||||||    
T  21938589 attttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatg 21938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 37421488 - 37421397
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctctttt-aaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| |||||   ||||||| |||||  |||||| ||||||| || |||| |||||||| |||||||||| |||||||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 37505093 - 37505160
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||| ||| || |||||||||||| |||||||||| |||||||||||    
T  37505093 attttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatg 37505160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 50926784 - 50926697
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||||||| ||||||| || ||  |||||| |||||   |||||| |||||||| |||| ||||||||||||||    
T  50926784 ttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactat 50926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 44954229 - 44954319
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||  |  ||||||| |||||  |||||| |||| ||||| ||||||||| || |||||||||  |||| ||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatg 44954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 50305289 - 50305239
Alignment:
Q  278 gaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||| ||||||| || |||||||||||| |||||||||| ||||||||||    
T  50305289 gaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 50305239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 23340186 - 23340275
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| ||||  |||| | ||||||| |||||  |||||  ||||||| ||||||||||||||| |||||||  | ||||||||||    
T  23340186 ttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat 23340275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 23526699 - 23526748
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||| |||||| |||||||||||||||| |||||| |||||| |||||    
T  23526699 cgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactat 23526748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 326
Target Start/End: Original strand, 50926283 - 50926320
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  50926283 tacctctttcaaatcgaacaaaatcgtccctaaactat 50926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 46269 - 46359
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| || |||| ||| ||| ||||||| |||||| |||||| ||| ||||||||||||||||||| |||||| |||||||||||||||    
T  46269 ttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatg 46359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 6115654 - 6115564
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| | |||| ||| | ||||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  6115654 ttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 6115564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 7910619 - 7910709
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| ||  |||||||||||||  |||||| |||  |||||||||||||||||| ||||||||||||||| ||||||    
T  7910619 ttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg 7910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 15255856 - 15255946
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  15255856 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 15255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 18050134 - 18050044
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 18050044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 7911159 - 7911070
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| ||||  || ||| ||||||| |||||  |||||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  7911159 ttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat 7911070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 28254969 - 28254880
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 28254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 42036292 - 42036225
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| |||||| | || |||||||||||||||||| ||||||||||||||||||||||    
T  42036292 attttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 42036225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 16578111 - 16578201
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||  | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16578111 ttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 16578201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 41260804 - 41260714
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| | |||| ||||| | |||||||||||||  |||||  | || |||||||||||||||||| ||||||||||||||||||||||    
T  41260804 ttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 41260714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 35427355 - 35427266
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| ||| |||||||||||||| |||| ||||||||||||||| |||||    
T  35427355 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat 35427266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 42035775 - 42035864
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat 42035864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 599535 - 599625
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  |||| |||||||||||||||||| |||||| |||||||| ||||||    
T  599535 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatg 599625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 35693894 - 35693960
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| ||| || |||||| | | |||||||||||||||||||||||||||||| ||||||||||    
T  35693894 attttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatat 35693960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 34799581 - 34799536
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34799581 ggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg 34799536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 18428282 - 18428215
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  18428282 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 18428215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 28254451 - 28254518
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| ||||||| || |||||||| ||| |||||||||| |||||||||||    
T  28254451 attttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatg 28254518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 9796729 - 9796819
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  | |||  ||||||||||||||||||||||| |||||| ||| |||||||||||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatg 9796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 26252865 - 26252902
Alignment:
Q  292 ctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26252865 ctcttttaaatcgaacaaaatcgtccctaaactatatg 26252902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 4799351 - 4799320
Alignment:
Q  158 taaaataagagatgagaaaagagaaattgaac 189  Q
    ||||||||||||||||||||||||||||||||    
T  4799351 taaaataagagatgagaaaagagaaattgaac 4799320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 9797247 - 9797180
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||| ||| || ||||||||| ||||||||||||| |||||||||||    
T  9797247 attttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatg 9797180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 15256335 - 15256284
Alignment:
Q  278 gaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  15256335 gaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 15256284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 18049616 - 18049683
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||| ||| || |||||||||||| |||||||||| |||||||||||    
T  18049616 attttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatg 18049683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 329
Target Start/End: Original strand, 18674206 - 18674241
Alignment:
Q  294 cttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18674206 cttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 41260313 - 41260364
Alignment:
Q  278 gaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  41260313 gaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 41260364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 2208740 - 2208806
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||  ||||||  |||||| || |||||||||||| |||||||||| ||||||||||    
T  2208740 attttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 2208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 5731355 - 5731265
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| | |||||||||| | ||||||| |||||   ||||  ||| |||||| || ||||||||| |||||||||| |||||||||||    
T  5731355 ttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatg 5731265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 35694381 - 35694332
Alignment:
Q  279 aaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||| |||||||| | |||||||||||| |||||||||| ||||||||||    
T  35694381 aaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatat 35694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 28636295 - 28636385
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||||| ||||||||| |||||  |||||  |||| ||| |||||||||||||| |||||||| |||||||||||||    
T  28636295 ttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg 28636385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 5114494 - 5114561
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  5114494 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 5114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 5120965 - 5120922
Alignment:
Q  286 tcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  5120965 tcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 5120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 24640705 - 24640638
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  24640705 attttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 24640638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 31574268 - 31574178
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||   ||| |||||||||||||||||| ||||||||||||||||||||||    
T  31574268 ttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 31574178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 25468875 - 25468942
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||  |||| || ||||||||||||||| ||||||||||||||||||||||    
T  25468875 attttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatg 25468942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 31073685 - 31073595
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| || ||  |||||  |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatg 31073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 25472533 - 25472466
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  25472533 attttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 25472466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 35163730 - 35163640
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| |||  || ||||||| || ||  |||||| ||| || ||||||| ||||| || ||||||||||||||||||||||    
T  35163730 ttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatg 35163640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 29891133 - 29891173
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||| |||| |||| |||||||||||||||||    
T  29891133 tacctcttttaaaccgaacaaaagcgtccctaaactatatg 29891173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 19528872 - 19528962
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| ||| |  |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  19528872 ttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 19528962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 46737198 - 46737108
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  46737198 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 46737108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 55677501 - 55677411
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | ||||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  55677501 ttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg 55677411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 6617160 - 6617116
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6617160 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 6617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 35193334 - 35193401
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||| ||  |||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  35193334 attttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg 35193401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 54440574 - 54440661
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  54440574 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 54440661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 34789926 - 34789836
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg 34789836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 34807119 - 34807209
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | |||||||||||||  |||||  |||| |||||||||||||||||| ||||||||||||||| ||||||    
T  34807119 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg 34807209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 45838554 - 45838640
Alignment:
Q  243 ttacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| |||| ||| | ||||||||| |||||  || ||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  45838554 ttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 45838640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 24851962 - 24851919
Alignment:
Q  286 tcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  24851962 tcctacctcttttaaatcgaacaaaatcgtccctaaactatatg 24851919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 28465107 - 28465174
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| |||||  | ||||||||||||||||||||| |||||||||| |||||||||||    
T  28465107 attttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 28465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 26974788 - 26974698
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | |||||||  || |  |||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg 26974698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 33689832 - 33689922
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  | |||  ||||||||||||||||||||||| |||||||||| |||||||||||    
T  33689832 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatg 33689922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 21034780 - 21034691
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||| ||||||||||||||| |||||||||||| ||||||||    
T  21034780 ttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatat 21034691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 14440348 - 14440281
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| |||||| ||||||| || |||||||||||| |||||| ||| |||||||||||    
T  14440348 attttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatg 14440281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 21034261 - 21034328
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  21034261 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 21034328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 28465601 - 28465534
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  28465601 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 28465534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 34789408 - 34789475
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  34789408 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 34789475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 54441089 - 54441022
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||| ||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  54441089 attttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 54441022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 14439831 - 14439921
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  |||| ||||| ||||||||  || ||||||||||||||||||||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatg 14439921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 16215015 - 16214949
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    |||||||||||||| |||||| | || || || |||||||| |||||||||||||| ||||||||||    
T  16215015 attttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat 16214949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 56077867 - 56077777
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| |   ||||||| |||||  |||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  56077867 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg 56077777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 12593052 - 12593117
Alignment:
Q  264 tttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| |||||  |||||| |||| ||||| |||||||||||| |||||||||| |||||||||||    
T  12593052 tttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg 12593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 12593566 - 12593477
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  |||| |||||||||||||||||| |||||||||  ||||||||||    
T  12593566 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat 12593477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 28166007 - 28166096
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||| |||||| ||| |  |||||||| |||||  |||||| ||||||| || |||||||||||| ||||| |||| ||||||||||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat 28166096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 17504464 - 17504412
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| ||||||| ||||||||||||||| |||| ||||| |||||||||||    
T  17504464 cgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 229164 - 229251
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||||||||||| || ||  |||||| |||| | ||||||| |||| ||| |||||||||| ||||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactat 229251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 6616698 - 6616765
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||  |||||| |||| ||  | |||||||||||| |||||||||| |||||||||||    
T  6616698 attttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatg 6616765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 35643581 - 35643648
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || ||| |||| |||||||||||||| |||||||||||    
T  35643581 attttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatg 35643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 41114183 - 41114250
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||| ||||| |||||||||||    
T  41114183 attttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatg 41114250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 41608377 - 41608465
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | |||||||||||||   ||||  |||| |||||||||||||||||| ||||||||||  ||||||||||    
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatg 41608465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 40160149 - 40160187
Alignment:
Q  291 cctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  40160149 cctcttttaaatcgaacaaaaccgtccctaaactatatg 40160187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 45839092 - 45839003
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| |  |||||||| |||||  |||||  ||||||| || |||||||||||| |||||||||| |||||||||||    
T  45839092 ttaattacacttttggtcctactattttgaccaactcacgaaat-ggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 45839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 18965181 - 18965230
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||||| | ||||||| |||||||| |||||||||| ||||||||    
T  18965181 cgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactat 18965230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 329
Target Start/End: Original strand, 36168377 - 36168422
Alignment:
Q  284 ggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||| |||||||||||||||||| |||||||||| |||| ||||||    
T  36168377 ggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatg 36168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 41608935 - 41608870
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactata 327  Q
    ||||||| |||||  |||||  |||||||||||||||||||| || |||||||| | |||||||||    
T  41608935 attttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 26974324 - 26974376
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  26974324 cgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 26974376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 30598009 - 30597973
Alignment:
Q  292 ctcttttaaatcgaataaaatcgtccctaaactatat 328  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  30598009 ctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 52236819 - 52236909
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||||| ||| |  |||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatg 52236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 52237360 - 52237270
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg 52237270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 52375874 - 52375784
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  52375874 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatg 52375784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 330379 - 330289
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||  ||| ||| ||| ||||||| |||||  |||||| |||||||||| ||||||||| || ||||||||||||||||||||||    
T  330379 ttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatg 330289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 22370599 - 22370689
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||||| |||||  |||||| |||||||||| ||||||| | || ||||||||||||||||||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatg 22370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 32730392 - 32730482
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| ||||| | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatg 32730482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 40275096 - 40275186
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatg 40275186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 40839195 - 40839105
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  |||||||  ||||  |||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatg 40839105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 41998771 - 41998689
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaa 321  Q
    ||||||||| |||| ||| | | ||||||| |||||| |||||  ||||||||||||||||||||||| ||||||||||||||    
T  41998771 ttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaa 41998689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 51827960 - 51828050
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  51827960 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatg 51828050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 34105170 - 34105103
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| ||||   |||||| |||||||||||||||| ||||||||||||||||||||||    
T  34105170 attttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatg 34105103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 38535815 - 38535748
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||| |||||   |||| | ||||||||||||||||||||||||||||||||||||||    
T  38535815 attttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatg 38535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 16689361 - 16689451
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||||||||||||||||||||||| |||||||||| |||| ||||||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg 16689451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 40275636 - 40275547
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacgaaat-ggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatg 40275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 40838655 - 40838745
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| ||||  || ||| ||||||| |||||  |||||| |||| ||||||||||||||| || |||||||||| |||||||||||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatg 40838745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 43678827 - 43678737
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | |||||||||||||  ||||   ||||| ||||||||||||||||| |||||||||| |||||||||||    
T  43678827 ttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatg 43678737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 51828542 - 51828632
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| | | ||||||| ||| || |||||  |||| |||||||||||||||||| |||||||||| |||||||||||    
T  51828542 ttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatg 51828632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 327
Target Start/End: Original strand, 49720397 - 49720462
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactata 327  Q
    ||||||| |||||  |||||  ||||||||||||||||||||||| ||||||||||||||| ||||    
T  49720397 attttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtata 49720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 55389609 - 55389698
Alignment:
Q  240 taattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||| |||| ||| ||  |||| || |||||  |||||| |||||||||| |||||||||||| |||||||||| |||||||||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatg 55389698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 52375368 - 52375420
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||| |||||||||||||| ||| ||||||||||||||||||||||    
T  52375368 cgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatg 52375420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 329872 - 329939
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  329872 attttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg 329939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 25534893 - 25534972
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccc 318  Q
    ||||||||| |||| ||| ||| ||||||| ||| |   ||||| ||||||||||||||||||||||| |||||||||||    
T  25534893 ttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtccc 25534972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 36701109 - 36701196
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||| |||||||||||||  |||||| | || | ||||||| |||||||| |||||||||| ||||||||    
T  36701109 ttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactat 36701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 37076217 - 37076131
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    |||||||||||||| ||| ||| |||||||||| ||  |||||| |||||  ||||||| |||||||| |||||||| ||||||||||    
T  37076217 ttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgt-cctaaactat 37076131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 41998255 - 41998322
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  41998255 attttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 41998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 46013448 - 46013515
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||  |||| |||||||||||||||||| ||||||||||||||| ||||||    
T  46013448 attttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatg 46013515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 47431722 - 47431789
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||| |||||||||||||||||| |||||||||  |||||||||||    
T  47431722 attttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatg 47431789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 49951572 - 49951639
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  49951572 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 49951639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 51473376 - 51473309
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  51473376 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 51473309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 27199705 - 27199795
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| ||| ||||||| || ||  |||||| |||| | ||||||| |||||||| |||| |||| ||||||||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatg 27199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 30513725 - 30513814
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| | | |||||||  ||||  |||||| ||||||| || ||||||||||||||||||||| | |||||||||||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatg 30513814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 43222393 - 43222483
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||| ||||| ||||||  ||||||| |||||  ||||||  ||  |  ||||||||||||||| ||||||||||||||||||||||    
T  43222393 ttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg 43222483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 49720904 - 49720814
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| |  |||||||| |||||  |||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  49720904 ttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 49720814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 49952089 - 49952003
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaacta 325  Q
    |||||||||||||| ||| | | ||||||| |||||  |||||  |||| |||||||||||||||||| |||||||||  |||||||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaacta 49952003  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 51829083 - 51828993
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| |||||  ||||||||||||||  |||||| |||| || || |||||| || || |||||||||| |||||||||||    
T  51829083 ttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatg 51828993  T

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Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 55390140 - 55390050
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| ||| ||| ||||| | ||| |  |||||| |||||||||| ||||||||| || ||||||||| ||||||||||||    
T  55390140 ttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatg 55390050  T

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Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 33412697 - 33412609
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactata 327  Q
    ||||||||| |||| ||| ||| |||||||||| ||  |||||| ||| ||  ||||||  ||||||| ||||||||||||||||||||    
T  33412697 ttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 43222895 - 43222843
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||| | |||||||||||||||| ||||||||||||||||| ||||    
T  43222895 cgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatg 43222843  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 44676525 - 44676565
Alignment:
Q  289 tacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  44676525 tacctcttttaaatcgaacaaaaccgtccctaaactatatg 44676565  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 2044313 - 2044364
Alignment:
Q  278 gaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| |||| |||||||||||||||||| |||||||||| |||| ||||||    
T  2044313 gaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatg 2044364  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 2051321 - 2051388
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||| | |||||||||||    
T  2051321 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatg 2051388  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 14654225 - 14654292
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| ||||||| || |||||||||||| |||||||||  |||||||||||    
T  14654225 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg 14654292  T

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Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 14654732 - 14654645
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| | | ||||||| |||||  |||||  ||  ||||||||||||||||||| |||||||||| ||||||||    
T  14654732 ttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactat 14654645  T

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Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 38535351 - 38535402
Alignment:
Q  278 gaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||| ||||||| || |||||||||||| |||||||||| |||||||||||    
T  38535351 gaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg 38535402  T

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Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 44676992 - 44676925
Alignment:
Q  262 attttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||| |||||  |||||| |||| || || |||||||||||| |||||||||| |||||||||||    
T  44676992 attttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 44676925  T

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Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 16701335 - 16701245
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||||||||||| ||| |   ||||||| |||||  |||||| |||| || || |||||| ||||| |||||||||| |||||||||||    
T  16701335 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatg 16701245  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 37075689 - 37075779
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    ||||||||| |||| |||  || ||||||| |||||  |||||| |||||| ||||||| ||||| || |||  |||||||||||||||||    
T  37075689 ttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatg 37075779  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 8874191 - 8874139
Alignment:
Q  277 cgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactatatg 329  Q
    |||||| |||||| | |||||||||||||| |||| | |||||||||||||||    
T  8874191 cgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatg 8874139  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 205910 - 205823
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||  ||||||| |||||  |||||| |||||| ||||||| |||||||| |||| ||||||||||||||    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 205823  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 210880 - 210793
Alignment:
Q  239 ttaattacattttttgtcatcgtattttgatcaactttcgaaaacggtcctacctcttttaaatcgaataaaatcgtccctaaactat 326  Q
    ||||||||| |||| ||| ||  ||||||| |||||   ||||| |||||| ||||||| |||||||| |||| ||||||||||||||    
T  210880 ttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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