View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16673_high_7 (Length: 267)
Name: NF16673_high_7
Description: NF16673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16673_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 23889923 - 23889688
Alignment:
| Q |
18 |
caatttaccataattgagtgactactaattattttacaacaaatcgtggttactcccataatcaacttgttcaaaattctttagcccataaaccaatata |
117 |
Q |
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| T |
23889923 |
caatttaccataattgagtgactactaattattttaccacaaatcgtggttactcccataatcaacttgttcaaaattctttagcccataaaccaatata |
23889824 |
T |
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| Q |
118 |
tttctctcatttgttccaaaaactgtccttcaagtaatgaaaatgcaacaaattatagcattaaattttatgaacatatttatttaatccaaagcttttg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
23889823 |
tttctctcatttgttccaaaaactgtccttcaagtaatgaaaatgcaacaaattatagcattaaattttattaacatatttatttaatccaaagcttttg |
23889724 |
T |
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| Q |
218 |
cattatgactctattgttttattttctaagtctgtg |
253 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
23889723 |
cattatgactctattgttttattttctaagtctgtg |
23889688 |
T |
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